View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13492_high_7 (Length: 384)
Name: NF13492_high_7
Description: NF13492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13492_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 69 - 329
Target Start/End: Complemental strand, 21125401 - 21125158
Alignment:
| Q |
69 |
gggagaggacgatttctcctctttgagatagaatggtaatcaaatttgatgaagacaactataccattg-aatttgattgggtatgtactcatcatattt |
167 |
Q |
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| T |
21125401 |
gggagaggacgatttctcctccttgagatagaatggaaatcaaatttgatgaagacaactataccattgaaatttgattgggtatgtactcatcatattt |
21125302 |
T |
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| Q |
168 |
gtcatgaaatttgattggaacccgcatatttttgtattaaaagacaattaacacactccatccaaaaaatcaacactatttcttttttatacatatctat |
267 |
Q |
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| T |
21125301 |
gtcatga-----------------catatttctgtcttaaaagacaattaacacactccatccaaaaaatcaacactattt-ttttttatacatatctat |
21125220 |
T |
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| Q |
268 |
tatattaaactagcataaagagtaacnnnnnnnngctagcataaagataaagactaatgtat |
329 |
Q |
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| T |
21125219 |
tatattaaactagcataaagagtaacaaaaaaaagctagcataaagacaaagactaatgtat |
21125158 |
T |
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