View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13492_low_11 (Length: 382)
Name: NF13492_low_11
Description: NF13492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13492_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 6 - 363
Target Start/End: Complemental strand, 35481116 - 35480759
Alignment:
| Q |
6 |
ataaataacaagaacctcggaaaaagtcacatgaagatcccgtggtagacaaagaagcctctgaatttcacaagtagcagctgcaagtgctcaaattctg |
105 |
Q |
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| T |
35481116 |
ataaataacaagaacctcggaaaaagtcacatgaagatcccgtggtagacaaagaagcctctgaatttcacaagtagcagctgcaagtgctcaaattctg |
35481017 |
T |
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| Q |
106 |
cttcactcgaagatctgaacacaatattttgtttttcagtgcgtcaagatataagagttgaacctaaaaagaaacacatgtcagataatcaacaccaaag |
205 |
Q |
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| T |
35481016 |
cttcactcgaagatctgaacacaatattttgtttttcagtgcgtcaagatataagagttgaacctaaaaagaaacacatgtcagataatcaacaccaaag |
35480917 |
T |
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| Q |
206 |
aacccataagatgcataatggaagaaacgggaaagaaaattcgaccagctggaggggagacccatgagtgccccacctgaatctgtccttgggtggttca |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35480916 |
aacccataagatgcataatggaagaaacgggaaagaaaattcgaccagctggaggggagacccatgagtgccccacctgaatctgtccttgggtggttca |
35480817 |
T |
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| Q |
306 |
agattcaacaattaaattgttcaattcgatttataaactattgtttgagatttaactt |
363 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35480816 |
agattcaacaattaaattgttcaattcgatttataaactattgtttgagatttaactt |
35480759 |
T |
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