View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13494_high_8 (Length: 210)
Name: NF13494_high_8
Description: NF13494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13494_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 7223333 - 7223186
Alignment:
| Q |
47 |
cactgcatattataagtcctcaaacaagaatccaaatatttgatctgaacattgacgagttattatgattatatatatacaaataaaagacaaaatagat |
146 |
Q |
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| T |
7223333 |
cactgcatattataaggcctcaaacaagaatccaaatacttgatctgaacattgacgagttattatgattatatatatacaaataaaagacaaaatagat |
7223234 |
T |
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| Q |
147 |
aggtactatgttagatgaagaagatactaaaaaacatcctagatcatag |
195 |
Q |
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| T |
7223233 |
aggtactatgttagatgaagaagatacta-aaaacatcctagatcatag |
7223186 |
T |
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