View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13495_high_13 (Length: 357)
Name: NF13495_high_13
Description: NF13495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13495_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 35 - 342
Target Start/End: Original strand, 45918112 - 45918419
Alignment:
| Q |
35 |
gaggattacgcaatatacaaatcttttaccatcattgaaaatcgagagaagaaattaaacaaattgtgatctaaaattaaccacaaagttgctacaataa |
134 |
Q |
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| T |
45918112 |
gaggattacgcaatatacaaatcttttaccatcattgaaaatcaagagaagaaatcaaacaaattgtgatctaaaattaaccacaaagttgctacaataa |
45918211 |
T |
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| Q |
135 |
tatcttatctacattgttnnnnnnnttacataaattattagaataannnnnnnacaaaatattaatttgtttaagcttatctaattagactctctagcat |
234 |
Q |
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| T |
45918212 |
tatcttatctacattgttaaaaaaattacataaattattagaataatttttttacaaaatattaatttgtttaagcttatctaattagactctctagcat |
45918311 |
T |
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| Q |
235 |
attgtttgatatgcacaaaagtggagcgacgtaaatttgaacatgtacagtttatatcgttattgaatattctttccaatgtttggttgttacgtagcac |
334 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45918312 |
attgtttgatatgcacaaaagtggagcgacgtaaatttgaacatgtacagtttatatcgttattgaatattctttccaatgtttggttgttacgtagcac |
45918411 |
T |
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| Q |
335 |
caacatgg |
342 |
Q |
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|||||||| |
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| T |
45918412 |
caacatgg |
45918419 |
T |
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