View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13495_high_16 (Length: 294)
Name: NF13495_high_16
Description: NF13495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13495_high_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 44115050 - 44114784
Alignment:
| Q |
28 |
aaacgatcaatcagatctttatgtttcaagactgagatataaagcaccataaaatcccactttgaaaccagagttaattattcacattggaaactaaata |
127 |
Q |
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| T |
44115050 |
aaacgatcaatcagatctttatgtttcaagactgagatataaagcaccagaaaatcccactttgaaaccagagttaattattcacattggaaactaaata |
44114951 |
T |
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| Q |
128 |
gcaattataaaatcttaactgaacccaaaaatgaataatattccaatgtgaatagaagcttgatcatcgcaattcttaattgtgtctattgcagtaccca |
227 |
Q |
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| T |
44114950 |
gcaattataaaatcttaactgaacccaaaaatgaataatattccaatgtgaatagaagcttgatcatcgcaattcttaattgtgtctattgcagtaccca |
44114851 |
T |
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| Q |
228 |
aatcnnnnnnnacacgttttctaattaatattctataattattggaatttgaatattctaattaata |
294 |
Q |
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|||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
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| T |
44114850 |
aatctttttttacacgttttctaattaatattctatagttataggaatttgaatattctaattaata |
44114784 |
T |
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