View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13495_low_16 (Length: 356)
Name: NF13495_low_16
Description: NF13495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13495_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 30621235 - 30620913
Alignment:
| Q |
18 |
gttaggtttctctctatctccacaagaacaacatccatcaacacaagatcaaacggtggcttctcgttttgggttcaaccctaatgaaatctcaggttct |
117 |
Q |
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| T |
30621235 |
gttaggtttctctctatctccacaagaacaacatccatcaacacaagatcaaacggtggcttcccgttttgggttcaaccctaatgaaatctcaggctct |
30621136 |
T |
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| Q |
118 |
gatgttcaaggagatcactgctatgatctctcttctcacacaactcctcatcattcactcaacctttctcatcctttttccatttatgaagctttccaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30621135 |
gatgttcaaggagatcactgctatgatctctcttctcacacaactcctcatcattcactcaacctttctcatcctttttccatttatgaagctttccaca |
30621036 |
T |
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| Q |
218 |
caaataacaacattcacaccactcaaggtttcacttctttcaccaataactcttccctaattaattttgtcaagaaaaaattagtataaggcttcacctt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
30621035 |
caaataacaacattcacaccactcaaggtttcacttctttcaccaataactcgtccctaattaattttgtcaagaaaaaattagtataatgcttcacctt |
30620936 |
T |
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| Q |
318 |
ggttagcactttatgagaaatat |
340 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
30620935 |
ggttagcactttatgagaaatat |
30620913 |
T |
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