View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13496_low_1 (Length: 778)

Name: NF13496_low_1
Description: NF13496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13496_low_1
NF13496_low_1
[»] chr3 (13 HSPs)
chr3 (19-352)||(10359319-10359652)
chr3 (19-352)||(9994890-9995227)
chr3 (434-764)||(9995344-9995675)
chr3 (434-764)||(10358874-10359207)
chr3 (434-764)||(48388038-48388366)
chr3 (434-638)||(10216529-10216733)
chr3 (434-638)||(10105381-10105585)
chr3 (434-638)||(10226141-10226345)
chr3 (604-764)||(10131188-10131348)
chr3 (434-638)||(10220046-10220252)
chr3 (289-351)||(48388469-48388531)
chr3 (380-436)||(9995257-9995313)
chr3 (380-427)||(10359244-10359291)
[»] chr5 (3 HSPs)
chr5 (434-638)||(26796000-26796204)
chr5 (434-638)||(26799517-26799722)
chr5 (434-638)||(26807066-26807272)
[»] chr4 (1 HSPs)
chr4 (19-95)||(17848570-17848646)
[»] chr6 (1 HSPs)
chr6 (129-204)||(29192179-29192254)


Alignment Details
Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 19 - 352
Target Start/End: Complemental strand, 10359652 - 10359319
Alignment:
Q  19 ccttttcttcattagcttaatctactgtattatattattgtgaacatttttattaatagctcagaatttgtatgaaagatgagaaatatctccgactaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10359652 ccttttcttcattagcttaatctactgtattatattattgtgaacatttttattagtagctcagaatttgtatgaaagatgagaaatatctccgactaaa 10359553  T
Q  119 tcgcgcttaaagcatacaatctaggtggccttattaacagatactagtaattatatatcaaaagaatgaaactagaatgatcaattatttaaaagtttga 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |     
T  10359552 tcgcgcttaaagcatacaatctaggtggccttattaacagatactagtaattatatatcaaaagaatgaaactagaatgatcaattgtttaaaagttggg 10359453  T
Q  219 aaattcaattgtaaaccactgctatttcaacaaagggaatatgaagactttgtaacgtttgtgtaaccaaatgtgatagtatacacaactcatgtaccat 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10359452 aaattcaattgtaaaccactgctatttcaacaaagggaatatgaagactttgtaacatttgtgtaaccaaatgtgatagtatacacaactcatgtaccat 10359353  T
Q  319 cttttgctgatacttggggatgggttttggtaat 352  Q
    ||||||||||||||||||||||||||||||||||    
T  10359352 cttttgctgatacttggggatgggttttggtaat 10359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 9994890 - 9995227
Alignment:
Q  19 ccttttcttcattagcttaatctactgtatt----atattattgtgaacatttttattaatagctcagaatttgtatgaaagatgagaaatatctccgac 114  Q
    |||||||||||||||||||| ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9994890 ccttttcttcattagcttaacctactgtattgtatatattattgtgaacatttttattaatagctcagaatttgtatgaaagatgagaaatatctccgac 9994989  T
Q  115 taaatcgcgcttaaagcatacaatctaggtggccttattaacagatactagtaattatatatcaaaagaatgaaactagaatgatcaattatttaaaagt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9994990 taaatcgcgcttaaagcatacaatctaggtggccttattaacagatactagtaattatatatcaaaagaatgaaactagaatgatcaattgtttaaaagt 9995089  T
Q  215 ttgaaaattcaattgtaaaccactgctatttcaacaaagggaatatgaagactttgtaacgtttgtgtaaccaaatgtgatagtatacacaactcatgta 314  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9995090 tgggaaattcaattgtaaaccactgctatttcaacaaagggaatatgaagactttgtaacgtttgtgtaatcaaatgtgatagtatacacaactcatgta 9995189  T
Q  315 ccatcttttgctgatacttggggatgggttttggtaat 352  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9995190 ccatcttttgctgatacttggggatgggttttggtaat 9995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 434 - 764
Target Start/End: Original strand, 9995344 - 9995675
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnn-gaataaatggagaattgctctatctaactggtgactggttcc 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  9995344 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaaagaataaatggagaattgctctatctaactggtgactggttcc 9995443  T
Q  533 attcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaa 632  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9995444 attcatctaccaccatgaacaagacgctttcgtgaatgtaagtacaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaa 9995543  T
Q  633 cattctaactcacttaaatgtttaggacatcgacaccaacattatatttgtttcaggcttcagaacgaaactcgtgtacaccgaagaaaatactagattc 732  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9995544 cattctaactcacttaaatgtttaggacatcgacaccaacattatatttgtttcaggcttcagaacaaaactcgtatacaccgaagaaaatactagattc 9995643  T
Q  733 attcctggacacggtgtggcttattgtctctg 764  Q
    ||||||||||||||||||||||||||||||||    
T  9995644 attcctggacacggtgtggcttattgtctctg 9995675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 434 - 764
Target Start/End: Complemental strand, 10359207 - 10358874
Alignment:
Q  434 cttcagaccaaccataattcattt-gttccgaggaaatggacaaaagaatnnnnnnnn--gaataaatggagaattgctctatctaactggtgactggtt 530  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||||||    
T  10359207 cttcagaccaaccataattcattttgttccgaggaaatggacaaaagaataaaaaaaaaagaataaatggagaattgctgtatctaactggtgactggtt 10359108  T
Q  531 ccattcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatc 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10359107 ccattcatctaccaccatgaacaagactctttcgcgaatgtaagtacaatatttctttttcgtaatttacatttcaatgaagaactctgactatgatatc 10359008  T
Q  631 aacattctaactcacttaaatgtttaggacatcgacaccaacattatatttgtttcaggcttcagaacgaaactcgtgtacaccgaagaaaatactagat 730  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10359007 aacattctaactcacttaaatgtttaggacatcgacaccaacattatatttgtttcaggcttcagaacgaaactcgtgtacaccgaagaaaatactagat 10358908  T
Q  731 tcattcctggacacggtgtggcttattgtctctg 764  Q
    ||||||||||||||||||||||||||||||||||    
T  10358907 tcattcctggacacggtgtggcttattgtctctg 10358874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 434 - 764
Target Start/End: Complemental strand, 48388366 - 48388038
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaatggagaattgctctatctaactggtgactggttcca 533  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  48388366 cttcagaccaaccattattcattggttctgaggaaatggacaaaagaatcaaagaaagaataaatggagaattgctctatctaactggtgactggttcca 48388267  T
Q  534 ttcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 633  Q
     ||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  48388266 ctcatctaccaccatgaacaagactctttcgcaatcgtaagtacaatatttcttttttgcaattcacatttcaatgaagaactctgattatgatatcaac 48388167  T
Q  634 attctaactcacttaaatgtttaggacatcgacaccaacattatatttgtttcaggcttcagaacgaaactc--gtgtacaccgaagaaaatactagatt 731  Q
    ||||| |||||    ||||||| |||  | |||||||| |   ||||||||||||||||||||| |||||||  |||||||| ||||||||| |||||||    
T  48388166 attctcactca----aatgttttggaacttgacaccaaaagcttatttgtttcaggcttcagaatgaaactcatgtgtacactgaagaaaatgctagatt 48388071  T
Q  732 cattcctggacacggtgtggcttattgtctctg 764  Q
    ||||||||||||||||||||||||| |||||||    
T  48388070 cattcctggacacggtgtggcttatcgtctctg 48388038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 10216529 - 10216733
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaatggagaattgctctatctaactggtgactggttcca 533  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  10216529 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaagaataaatggagaattgctctatctaactggtgactggttcca 10216628  T
Q  534 ttcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 633  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10216629 ttcatctaccaccatgaacaatactctttcgcgaatgtaagtacaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 10216728  T
Q  634 attct 638  Q
    |||||    
T  10216729 attct 10216733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 10105381 - 10105585
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaatggagaattgctctatctaactggtgactggttcca 533  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| ||    
T  10105381 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaagaataaatggagaattgctctatctaactggtgactggtttca 10105480  T
Q  534 ttcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 633  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10105481 ttcatctaccaccatgaacaatactctttcgcgaatgtaagtacaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 10105580  T
Q  634 attct 638  Q
    |||||    
T  10105581 attct 10105585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 10226141 - 10226345
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaatggagaattgctctatctaactggtgactggttcca 533  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  10226141 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaagaataaatggagaattgctctatctaactggtgactggttcca 10226240  T
Q  534 ttcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 633  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10226241 ttcatctaccaccatgaacaatactctttcgcgaatgtaagtacaacatttctttttcacaatttacatttcaatgaagaactctgactatgatatcaac 10226340  T
Q  634 attct 638  Q
    |||||    
T  10226341 attct 10226345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 604 - 764
Target Start/End: Original strand, 10131188 - 10131348
Alignment:
Q  604 tcaatgaagaactctgactatgatatcaacattctaactcacttaaatgtttaggacatcgacaccaacattatatttgtttcaggcttcagaacgaaac 703  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  10131188 tcaatgaagaactctgactatgatatcaacattctaactcacttaaatgtttagaacatcgacaccaacattatatttgtttcaggcttcataacgaaac 10131287  T
Q  704 tcgtgtacaccgaagaaaatactagattcattcctggacacggtgtggcttattgtctctg 764  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10131288 tcgtgtacaccgaagaaaatactagattcattcctggacacggtgtggcttattgtctctg 10131348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 10220046 - 10220252
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaa-tggagaattgctctatctaactggtgactggttcc 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         || ||| |||||||||||||||||||||||||||||||||||    
T  10220046 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaataaaaaaatggagaattgctctatctaactggtgactggttcc 10220145  T
Q  533 attcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttc-tttttcgcaatttacatttcaatgaagaactctgactatgatatca 631  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10220146 attcatctaccaccatgaacaatactctttcgcgaatgtcagtacaatatttcttttttcgcaatttacatttcaatgaagaactctgactatgatatca 10220245  T
Q  632 acattct 638  Q
    |||||||    
T  10220246 acattct 10220252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 48388531 - 48388469
Alignment:
Q  289 atgtgatagtatacacaactcatgtaccatcttttgctgatacttggggatgggttttggtaa 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48388531 atgtgatagtatacacaactcatgtaccatcttttgctgatacttggggatgggttatggtaa 48388469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 9995257 - 9995313
Alignment:
Q  380 ttgtttgtgttgtagtataactcagttgtcatcaactattttttacaacaagtactt 436  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9995257 ttgtttgtgttgtagtataactcacttgtcatcaactattttttacaacaagtactt 9995313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 10359291 - 10359244
Alignment:
Q  380 ttgtttgtgttgtagtataactcagttgtcatcaactattttttacaa 427  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10359291 ttgtttgtgttgtagtataactcagttatcatcaactattttttacaa 10359244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 3e-90; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 26796000 - 26796204
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaatggagaattgctctatctaactggtgactggttcca 533  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| ||    
T  26796000 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaagaataaatggagaattgctctatctaactggtgactggtttca 26796099  T
Q  534 ttcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 633  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26796100 ttcatctaccaccatgaacaatactctttcgcgaatgtaagtacaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaac 26796199  T
Q  634 attct 638  Q
    |||||    
T  26796200 attct 26796204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 26799517 - 26799722
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaa-tggagaattgctctatctaactggtgactggttcc 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         || ||| |||||||||||||||||||||||||||||||||||    
T  26799517 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaataaaaaaatggagaattgctctatctaactggtgactggttcc 26799616  T
Q  533 attcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaa 632  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26799617 attcatctaccaccatgaacaatactctttcgcgaatgtaagtacaatatttctttttcgcaatttacatttcaatgaagaactctgactatgatatcaa 26799716  T
Q  633 cattct 638  Q
    ||||||    
T  26799717 cattct 26799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 434 - 638
Target Start/End: Original strand, 26807066 - 26807272
Alignment:
Q  434 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaatnnnnnnnngaataaa-tggagaattgctctatctaactggtgactggttcc 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         || ||| |||||||||||||||||||||||||||||||||||    
T  26807066 cttcagaccaaccataattcatttgttccgaggaaatggacaaaagaataaaaaaaataaaaaaatggagaattgctctatctaactggtgactggttcc 26807165  T
Q  533 attcatctaccaccatgaacaagactctttcgcgaatgtaagtagaatatttc-tttttcgcaatttacatttcaatgaagaactctgactatgatatca 631  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26807166 attcatctaccaccatgaacaatactctttcgcgaatgtcagtacaatatttcttttttcgcaatttacatttcaatgaagaactctgactatgatatca 26807265  T
Q  632 acattct 638  Q
    |||||||    
T  26807266 acattct 26807272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 17848646 - 17848570
Alignment:
Q  19 ccttttcttcattagcttaatctactgtattatattattgtgaacatttttattaatagctcagaatttgtatgaaa 95  Q
    ||||| ||||||||||||||| ||| |||||||||| |||| |||||||| |  ||| |||||||||||||||||||    
T  17848646 cctttgcttcattagcttaatttacagtattatattgttgtaaacattttgaccaatggctcagaatttgtatgaaa 17848570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 29192254 - 29192179
Alignment:
Q  129 agcatacaatctaggtggccttattaacagatactagtaattatatatcaaaagaatgaaactagaatgatcaatt 204  Q
    |||| ||| |||||| | |||| |||||||||||||||||  ||||||||| | ||| ||||||||||||||||||    
T  29192254 agcacacagtctaggcgtccttgttaacagatactagtaaagatatatcaacataataaaactagaatgatcaatt 29192179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University