View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13498_high_13 (Length: 385)
Name: NF13498_high_13
Description: NF13498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13498_high_13 |
 | |
|
| [»] scaffold0130 (1 HSPs) |
| | |
|
| [»] scaffold0016 (2 HSPs) |
| | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
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| [»] scaffold0319 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0064 (1 HSPs) |
| | |
|
| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0019 (2 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0107 (2 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
| | |
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| [»] scaffold0029 (1 HSPs) |
| | |
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| [»] scaffold0008 (1 HSPs) |
| | |
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| [»] scaffold0423 (1 HSPs) |
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|
Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 32 - 364
Target Start/End: Original strand, 22638316 - 22638649
Alignment:
| Q |
32 |
gttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatc |
131 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22638316 |
gttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatc |
22638415 |
T |
|
| Q |
132 |
atcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacga |
230 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |
|
|
| T |
22638416 |
atcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaatacga |
22638515 |
T |
|
| Q |
231 |
cgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaa |
330 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22638516 |
cgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaa |
22638615 |
T |
|
| Q |
331 |
gagcaacatgcagtctttgaaaaaccagacactt |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
22638616 |
gagcaacatgcagtctttgaaaaaccagacactt |
22638649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 20 - 370
Target Start/End: Complemental strand, 23200837 - 23200486
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
23200837 |
gacatcaccaatgttgacaaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt |
23200738 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||| ||||||||||| |
|
|
| T |
23200737 |
tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctacc |
23200638 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
23200637 |
ggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataat |
23200538 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23200537 |
ggttgtgtagaagagcaacatgcagtctttgaaaaaccagacacttcgatga |
23200486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 20 - 370
Target Start/End: Complemental strand, 23626466 - 23626115
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
23626466 |
gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatat |
23626367 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
23626366 |
tgaaaaaagatcatcccaaggaggatgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctacc |
23626267 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
23626266 |
ggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaagccgctatgctattatgtcatgaataac |
23626167 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||||| ||||| |
|
|
| T |
23626166 |
ggttgtgtagaagagcaacatgcagtctttgaaaaatcaaacacttcgatga |
23626115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 50 - 359
Target Start/End: Original strand, 24911914 - 24912223
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||| ||||||| || ||||| ||||||||||| ||||| || |||||||| |||||||| | |
|
|
| T |
24911914 |
aagcagagagctgttttcgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatcttaaagaaggaccatcccaaagaggatgaag |
24912012 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| || || ||| ||||||||||||||||||| |||| |||| |
|
|
| T |
24912013 |
aaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggtatcaattctatctgtggaatacgacgttcagtcagaagttaa |
24912112 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtcttt |
348 |
Q |
| |
|
||| | |||||||| ||||| || |||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
24912113 |
tgaagttgaaagtgacttcgttgacgaaatggcgacgcacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtcttt |
24912212 |
T |
|
| Q |
349 |
gaaaaaccaga |
359 |
Q |
| |
|
||||||||||| |
|
|
| T |
24912213 |
gaaaaaccaga |
24912223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 23813973 - 23813889
Alignment:
| Q |
254 |
tggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaaca |
338 |
Q |
| |
|
|||||||||| ||| |||||||||||| ||| | |||||| ||||||| ||||| ||||| |||||||||| ||||| ||||| |
|
|
| T |
23813973 |
tggaaagtgaattcaccgatgaaatggctatttagaagccattatgctactatgttatgaacaatggttgtgtcgaagatcaaca |
23813889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 20 - 370
Target Start/End: Original strand, 43131 - 43482
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
43131 |
gacatcaccaatgttgataaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt |
43230 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
43231 |
tgaagaaagatcatcccaaggaggatgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctact |
43330 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||||| |
|
|
| T |
43331 |
ggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggaaactcacaaggcgctatgctattatgtcatgaataat |
43430 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
43431 |
ggttgtgtagaagagcaacatgcagtctttgaaaaaccagacacttcgatga |
43482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 32 - 364
Target Start/End: Complemental strand, 18171830 - 18171497
Alignment:
| Q |
32 |
gttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatc |
131 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18171830 |
gttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaagaaagatc |
18171731 |
T |
|
| Q |
132 |
atcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacga |
230 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |
|
|
| T |
18171730 |
atcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttctatcctactggtggaatacaa |
18171631 |
T |
|
| Q |
231 |
cgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaa |
330 |
Q |
| |
|
|||||||| ||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
18171630 |
cgttcagtcagaaattaacgaagtgcaaagtgatttcgtcgatgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaa |
18171531 |
T |
|
| Q |
331 |
gagcaacatgcagtctttgaaaaaccagacactt |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
18171530 |
gagcaacatgcagtctttgaaaaaccagacactt |
18171497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 28 - 341
Target Start/End: Complemental strand, 14342856 - 14342542
Alignment:
| Q |
28 |
caacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaa |
127 |
Q |
| |
|
|||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||| ||||||||| |
|
|
| T |
14342856 |
caacattgaccaaacggaggataagcagaaagctgtgttcgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattttgaagaaa |
14342757 |
T |
|
| Q |
128 |
gatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaat |
226 |
Q |
| |
|
||| | |||| ||||||||||| ||||||||||||||||| | ||||||||| || ||||||||||| || ||||||| ||| ||||| | ||||||| |
|
|
| T |
14342756 |
gattgttccaaagaggatgaggagatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcctgtggaat |
14342657 |
T |
|
| Q |
227 |
acgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtga |
326 |
Q |
| |
|
|||| || |||| ||| ||||| ||| |||||| ||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14342656 |
acgatgtccagtcagagattaatgaagtggaaaatgactttgtcgatgaaatggcaactcacaagccactatgctattatgtcatgaataatggctgtgt |
14342557 |
T |
|
| Q |
327 |
ggaagagcaacatgc |
341 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
14342556 |
ggaagaacaacatgc |
14342542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 18133743 - 18133578
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||| ||||| ||||| |||| ||||||||| |||||||||||||||||||| ||| |||| || |||||||||||||| |
|
|
| T |
18133743 |
gacatcaccaatattgacaaaagggagggcaagcaaaaagttgtgttcgagatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
18133644 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtc |
185 |
Q |
| |
|
|||||||||||| | |||| || |||||||| ||||||||||||||||| | ||||||||| |||| |
|
|
| T |
18133643 |
tgaagaaagatcgttccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc |
18133578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 32 - 364
Target Start/End: Complemental strand, 126755 - 126422
Alignment:
| Q |
32 |
gttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatc |
131 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
126755 |
gttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatc |
126656 |
T |
|
| Q |
132 |
atcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacga |
230 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||| |
|
|
| T |
126655 |
atcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaatacga |
126556 |
T |
|
| Q |
231 |
cgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaa |
330 |
Q |
| |
|
|||| ||| ||||||||||||| | |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
126555 |
cgtttagtcagaaattaacgaagttgaaagtgatttcgtcgattaaatggcaactcacaatccactatgctattatgtcatgaataatggttgtgtagaa |
126456 |
T |
|
| Q |
331 |
gagcaacatgcagtctttgaaaaaccagacactt |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
126455 |
gagcaacatgcagtctttgaaaaaccagacactt |
126422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 341
Target Start/End: Complemental strand, 179447 - 179176
Alignment:
| Q |
71 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
170 |
Q |
| |
|
|||||||| ||| |||| || || |||||||| || || |||||||| ||||||||||| ||||| || |||||||| |||||||| || |||||| | |
|
|
| T |
179447 |
atggttaaaaaatcagccacagaaagaatctcccctcctttgtcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcgaatttctcca |
179348 |
T |
|
| Q |
171 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
269 |
Q |
| |
|
|||||||| || |||| |||||||| |||||||| || | | | || || || ||||||| | |||| |||||||| | |||||||| || |
|
|
| T |
179347 |
agtctgacccaagcttcgatatagtgtgcaatgtggtctcagtgttgcctgttgagtatgacgttccttcagaagttaacgaagtagaaagtgactttac |
179248 |
T |
|
| Q |
270 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
341 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||||| || || |||||||||| ||||| |||||||| |
|
|
| T |
179247 |
cgacgaaatgattatccacaagccactatgctattatgttataaacaatggttgtgtcgaagatcaacatgc |
179176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 20 - 370
Target Start/End: Original strand, 11347 - 11698
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
11347 |
gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattt |
11446 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| || ||||||| ||||||||||| |
|
|
| T |
11447 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttctatcctacc |
11546 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11547 |
tatggaatatgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaattaacaagccactatgctattatgtcatgaataat |
11646 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11647 |
agttgtgtagaagagcaacatgcagtctttgaaaaaccagacacttcgatga |
11698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 20 - 362
Target Start/End: Original strand, 23435091 - 23435434
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
23435091 |
gacatcaccaatgttgacaaaacagagggtaagcagaaggttgtgttcgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattt |
23435190 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||| |
|
|
| T |
23435191 |
tgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcttact |
23435290 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||||| |
|
|
| T |
23435291 |
ggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggtaactcacaattctctatgctattatgtcatgaataat |
23435390 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacac |
362 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23435391 |
ggttgtgtagaagagcaacatgcagtctttgaaaaaccagacac |
23435434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 20 - 370
Target Start/End: Complemental strand, 19035386 - 19035035
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||| |||||| ||||| |||||| |||||||||| ||||| ||||||||||| ||||||||||| | ||||||||||| | |
|
|
| T |
19035386 |
gacatcaccaatgttgacaaaggagagggcaagcaaaaagctatgttcgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattt |
19035287 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctact |
218 |
Q |
| |
|
|||||||| || ||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||| || || | || |||||||| || ||||||| |
|
|
| T |
19035286 |
tgaagaaaaataatcccaaaaaggatgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacc |
19035187 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19035186 |
tgtggaatacgacgtgcagtcagaaattaatgaagttgaaagtgacttcgtcgatgaaatggcaattcacaagccattatgctattatgtcatgaataat |
19035087 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
19035086 |
ggttgtgtagaagagcaacatgcagtctttgaaaaaccagatacttcgatga |
19035035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 20 - 370
Target Start/End: Complemental strand, 13289575 - 13289224
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| | |
|
|
| T |
13289575 |
gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattt |
13289476 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
13289475 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacc |
13289376 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
||||||| |||||||| | ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13289375 |
tttggaatatgacgttcattcagaaattaacgaagttgaaagtgatttcgtcgatgaaatgtcaattcacaagccactatgctattatgtcatgaataac |
13289276 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13289275 |
ggttgtgtagaagagcaacatgcagtctttgaaaaaccagacacttcgatga |
13289224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 53 - 370
Target Start/End: Complemental strand, 14772742 - 14772424
Alignment:
| Q |
53 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaa |
152 |
Q |
| |
|
|||| |||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| |||| |
|
|
| T |
14772742 |
cagagagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaa |
14772643 |
T |
|
| Q |
153 |
tgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacga |
251 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || ||||||| ||||||||||||||||||| |||| |||| || |
|
|
| T |
14772642 |
tgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacctgtggaatacgacgttcagtcagaagttaatga |
14772543 |
T |
|
| Q |
252 |
aatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaa |
351 |
Q |
| |
|
| | |||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
14772542 |
agttgaaagtgacttcgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgttgtctttgaa |
14772443 |
T |
|
| Q |
352 |
aaaccagacactttgatga |
370 |
Q |
| |
|
||||||||| ||| ||||| |
|
|
| T |
14772442 |
aaaccagacgcttcgatga |
14772424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 338
Target Start/End: Complemental strand, 18562670 - 18562450
Alignment:
| Q |
119 |
ttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctac |
217 |
Q |
| |
|
||||||||||||| ||| ||||| ||||| |||||||| ||||| || ||| ||||||||| |||||||||||| | || ||||| || || | |||| |
|
|
| T |
18562670 |
ttgaagaaagatcctccaaaggaagatgaagaaatgacgtcaaacttttctgaatctgacccgagtctcgacataatatgcaatgtcgtgtcagtgctac |
18562571 |
T |
|
| Q |
218 |
tggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataa |
317 |
Q |
| |
|
| || |||||||| |||| | || | || ||| |||||||||| ||| | ||||||||||| ||||| |||||| ||||||| ||||| |||||||| |
|
|
| T |
18562570 |
tagtcgaatacgatgttccttcggaggtcaatgaagtggaaagtgacttcattgatgaaatggctattcataagccattatgctactatgttatgaataa |
18562471 |
T |
|
| Q |
318 |
tggttgtgaggaagagcaaca |
338 |
Q |
| |
|
|||||||| ||||| ||||| |
|
|
| T |
18562470 |
tggttgtgtcgaagatcaaca |
18562450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 364
Target Start/End: Original strand, 9626 - 9971
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||| | |
|
|
| T |
9626 |
gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt |
9725 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
9726 |
taaagaaagaacatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacc |
9825 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
||||||||||||||||| | ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9826 |
tgtggaatacgacgttcaatcagaaattaacgaagttgaaagtgatttcgtcgacgaaatggcaattcacaagccactatgttattatgtcatgaataac |
9925 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
364 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9926 |
ggttgcgtagaagagcaacatgcagtctttgaaaaaccagatactt |
9971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 370
Target Start/End: Complemental strand, 17423062 - 17422711
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
17423062 |
gacatcaccaatgttgacaaaacggaggataagcagaaagaggtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatct |
17422963 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| || ||||||||||| || ||||||| ||||||||||| |
|
|
| T |
17422962 |
tgaagaaagatcatcccaaagaggatgaggagatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacc |
17422863 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
||||||||||| || |||| |||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
17422862 |
tgtggaatacgatgtccagtcagaaattaacaaagtggaaagtgatttcgtcgatgaaatggcaacccacaagccactatgctcttatgtcatgaataat |
17422763 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||| |||| ||||| |
|
|
| T |
17422762 |
ggttgtgtagaagagcaacatgcagtcttcgaaaaaccagaaacttcgatga |
17422711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 50 - 364
Target Start/End: Complemental strand, 22348942 - 22348627
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| | |
|
|
| T |
22348942 |
aagcagaaagttgtgttcgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag |
22348843 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||| || || || || ||||||| ||| ||||||| ||| ||||||||||||||| |||| |||| |
|
|
| T |
22348842 |
aaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacctgtgaaatacgacgttcagtcagaagttaa |
22348743 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtcttt |
348 |
Q |
| |
|
||| | |||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| || || |||||||| |||||| |
|
|
| T |
22348742 |
tgaagttgaaagtgacttcgtcgacgaaatggcaactcacaagccactatgctattatgttatgaataatggttgtgtagaggaacaacatgctgtcttt |
22348643 |
T |
|
| Q |
349 |
gaaaaaccagacactt |
364 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
22348642 |
gaaaaaccagatactt |
22348627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 53 - 341
Target Start/End: Original strand, 1735317 - 1735606
Alignment:
| Q |
53 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaa |
152 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| || |||| || |||||||||||||| |||||||||||||| | || || || ||||| | |
|
|
| T |
1735317 |
cagaaagctgtgttcgagatggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggaga |
1735416 |
T |
|
| Q |
153 |
tgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacga |
251 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||| |||||||| || ||||||||| | ||| | | ||||||||||| || |||| ||| ||||| || |
|
|
| T |
1735417 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtggaatacgatgtccagtcagatattaatga |
1735516 |
T |
|
| Q |
252 |
aatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
341 |
Q |
| |
|
| | |||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
1735517 |
agtcgaaagtgacttcgtcgatgagatggcaactcacaaaccactatgctattatgtcatgaataatggctgtgtggaagaacaacatgc |
1735606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 370
Target Start/End: Original strand, 22067788 - 22068099
Alignment:
| Q |
59 |
gctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgactt |
158 |
Q |
| |
|
||||| ||| |||||||||| || ||||| | ||| |||||||| || || || ||||| ||||||| || |||||| ||||||||||| |||||||||| |
|
|
| T |
22067788 |
gctgttttcaaaatggttaaaaagccagccatggaaagaatctcccctcccttatcaattttgaagagaggtcatcctaaggaggatgaagaaatgactt |
22067887 |
T |
|
| Q |
159 |
caaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatgga |
257 |
Q |
| |
|
| |||||||||||||||||||| |||||||| |||||||| |||||||| || | | | ||||||||||||||||||| ||| |||| ||| | || |
|
|
| T |
22067888 |
cgaatttcactggatctgaccc-agtctcgatatagtgtgcaatgtggtgtcagtttttcctgtggaatacgacgttcagtcggaagttaatgaagttga |
22067986 |
T |
|
| Q |
258 |
aagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaacca |
357 |
Q |
| |
|
|||||| ||| |||| ||||||| || || |||||| ||||||||||||||||||| ||||| |||| |||||||| ||||| || ||||||| |||| |
|
|
| T |
22067987 |
aagtgacttcatcgacaaaatggccatccataagccattatgctattatgtcatgaacaatggctgtgttgaagagcagcatgccgtttttgaaagacca |
22068086 |
T |
|
| Q |
358 |
gacactttgatga |
370 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
22068087 |
gatgctttgatga |
22068099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 23 - 370
Target Start/End: Original strand, 10150777 - 10151125
Alignment:
| Q |
23 |
atcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttga |
122 |
Q |
| |
|
|||| ||| ||||||||| |||||| |||| |||| |||||||||||||||||| ||||||| || ||||||||||| |||||||||||||| |||| |
|
|
| T |
10150777 |
atcaccaatgttgacaaaggagagggcaagcgaaaagatgtgttcgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttga |
10150876 |
T |
|
| Q |
123 |
agaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggt |
221 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||| |||| |||| || |
|
|
| T |
10150877 |
agaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttctatactacctgt |
10150976 |
T |
|
| Q |
222 |
ggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggt |
321 |
Q |
| |
|
|||||| ||||||| || ||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10150977 |
ggaatatgacgttccgtcagaaattaatgaagttgaaagtgatttcatcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggt |
10151076 |
T |
|
| Q |
322 |
tgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
10151077 |
tgtgtagaagagcaacatgcagtctttgaaaaatcagacacttcgatga |
10151125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 38 - 306
Target Start/End: Complemental strand, 13307066 - 13306797
Alignment:
| Q |
38 |
aaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatccca |
137 |
Q |
| |
|
|||||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
13307066 |
aaaacacaggataagcagaaaactgtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaattttgaagaaagatcatccca |
13306967 |
T |
|
| Q |
138 |
aggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttca |
236 |
Q |
| |
|
| |||||||| || |||||||| |||||||| |||||||||||||||||||| ||||| || ||||||| ||||||||||| |||||||||||| ||||| |
|
|
| T |
13306966 |
aagaggatgaagatatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttctatcctaccggtggaatacgatgttca |
13306867 |
T |
|
| Q |
237 |
gttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattat |
306 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
13306866 |
gttagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaagccactgtgctattat |
13306797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 20 - 359
Target Start/End: Complemental strand, 14693434 - 14693094
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| |||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||| |
|
|
| T |
14693434 |
gacatcaccaatattgacaaaacggaggacaagcagaaagccgtgttcgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatct |
14693335 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctact |
218 |
Q |
| |
|
|||||||||| ||| |||| |||||| |||| ||||||||||||||||| | ||||||||| | ||||||||||| || ||||||| ||||||| | | |
|
|
| T |
14693334 |
tgaagaaagaccattccaaagaggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcc |
14693235 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
||||||||||| || |||| ||||||||| ||| | |||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
14693234 |
tgtggaatacgatgtccagtcagaaattaatgaagttgaaattgacttcgtcgatgaaatggaaactcacaagccactatgctattatgtcatgaataat |
14693135 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
359 |
Q |
| |
|
|| |||| |||||| |||||||| || || || |||||||| |
|
|
| T |
14693134 |
ggctgtgtggaagaacaacatgcggttttcgagaaaccaga |
14693094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 33 - 359
Target Start/End: Complemental strand, 7402181 - 7401854
Alignment:
| Q |
33 |
ttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatca |
132 |
Q |
| |
|
||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||| || ||||| || |||||||||||||| |||||||| || |
|
|
| T |
7402181 |
ttgacaaaatggaggataaacagaaagctgtgttcgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtattg |
7402082 |
T |
|
| Q |
133 |
tcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgac |
231 |
Q |
| |
|
| |||| ||||||||||| ||||||||||||||||| | || |||||| |||||||||||||| || ||||||||| | ||||| | | ||||||||| |
|
|
| T |
7402081 |
ttccaaagaggatgaggagatgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctgaggaatacgat |
7401982 |
T |
|
| Q |
232 |
gttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaag |
331 |
Q |
| |
|
|| |||| ||| ||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |
|
|
| T |
7401981 |
gtccagtcagagattaatgaagtggaaagtgactttgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggctgcgtggaag |
7401882 |
T |
|
| Q |
332 |
agcaacatgcagtctttgaaaaaccaga |
359 |
Q |
| |
|
| |||||||| || ||||| || ||||| |
|
|
| T |
7401881 |
aacaacatgcggtttttgagaagccaga |
7401854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 50 - 341
Target Start/End: Original strand, 10782173 - 10782465
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||||||||||||| || ||||||||||| |||||||| ||| |||| |||||||||||||| || ||| |||||||||||| || || ||||||| |
|
|
| T |
10782173 |
aagcagaaagctgtgtttgagatggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaagatgagg |
10782272 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
|||||||||| |||||||| | ||||||||| ||||| |||||||| || ||||||| ||| || | | |||||||| || || |||| ||||||||| |
|
|
| T |
10782273 |
aaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtggaatatgatgtccagtcagaaattaa |
10782372 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
341 |
Q |
| |
|
||| ||||||||||| |||||||| ||||||| |||||| ||||| |||||||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
10782373 |
tgaagccgaaagtgattttgtcgatgagatggcaactcacaaaccactgtgctattatgtcatgaataatgactgtgtggaagaacaacatgc |
10782465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 7365426 - 7365311
Alignment:
| Q |
244 |
attaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcag |
343 |
Q |
| |
|
||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| |||||||| | |
|
|
| T |
7365426 |
attaatgaagtggaaagtgactttgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggctgcgtggaagaacaacatgcgg |
7365327 |
T |
|
| Q |
344 |
tctttgaaaaaccaga |
359 |
Q |
| |
|
| ||||| || ||||| |
|
|
| T |
7365326 |
tttttgagaagccaga |
7365311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 50 - 370
Target Start/End: Original strand, 21511006 - 21511327
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| | |
|
|
| T |
21511006 |
aagcagaaagcggtgttcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaggaggatgaag |
21511105 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| || || | || |||||||| || ||| |||| |||||||||||||||||||| ||| |||| |
|
|
| T |
21511106 |
aaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttacttgtggaatacgacgttcagttggaagttaa |
21511205 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtcttt |
348 |
Q |
| |
|
|||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
21511206 |
cgaagtggaaagtgattttgtcgacgaaatggcaactcacaagccactatgctattacgtcgtgaataatggttgtgtagaagaacaacatgccgtcttt |
21511305 |
T |
|
| Q |
349 |
gaaaaaccagacactttgatga |
370 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
21511306 |
gaaaaaccagacacttcgatga |
21511327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 370
Target Start/End: Original strand, 29608 - 29959
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||| | |||| ||||| |||| |||||||||||||||||| |||||||| | ||||||||||| ||||| |||||||| | |
|
|
| T |
29608 |
gacatcaccaatattgacaaaagaaagggcaagcaaaaagatgtgttcgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattt |
29707 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctact |
218 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| ||| ||||||| ||||||||||| || || |||||||| || ||||||||| ||||||||| |
|
|
| T |
29708 |
tgaagaaagatcatcccaaagaggatgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttctatcctacc |
29807 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29808 |
agtggaatacgacgttcagtcagaaattaatgaagttgaaagtgatttcgtcgatgaaatggaaattcacaagccactatgctattatgtcatgaataat |
29907 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
|||| || |||||||| ||||||||||| |||||||||||||||| ||||| |
|
|
| T |
29908 |
ggttatgtagaagagcatcatgcagtcttagaaaaaccagacacttcgatga |
29959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 364
Target Start/End: Original strand, 26194 - 26539
Alignment:
| Q |
20 |
gacatcatcaacgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatct |
119 |
Q |
| |
|
||||||| ||| ||||||||| ||||| ||| |||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||| | |
|
|
| T |
26194 |
gacatcaccaatgttgacaaaggagaggataaacagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt |
26293 |
T |
|
| Q |
120 |
tgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctact |
218 |
Q |
| |
|
|||||||||| || |||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| || ||||||| |
|
|
| T |
26294 |
tgaagaaagactctctcaaggaggatgaagagatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctacc |
26393 |
T |
|
| Q |
219 |
ggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataat |
318 |
Q |
| |
|
|||||||| |||||||| | ||||||||||||| | ||||||||||||||||| ||||||| || |||||| |||||||| ||||||||||||||||| |
|
|
| T |
26394 |
tgtggaatatgacgttcaatcagaaattaacgaagtcgaaagtgatttcgtcgacgaaatggaaactcacaaaccactatgttattatgtcatgaataac |
26493 |
T |
|
| Q |
319 |
ggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
364 |
Q |
| |
|
|| |||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26494 |
ggatgtgtggaagagcaacatgcagtatttgaaaaaccagacactt |
26539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 43 - 370
Target Start/End: Complemental strand, 37778 - 37450
Alignment:
| Q |
43 |
agagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggag |
142 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||| || |||||||| ||||||| || |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
37778 |
agaggttaaacagaaagctgtgttcgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttgaagaaagactttcccaaggag |
37679 |
T |
|
| Q |
143 |
gatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttag |
241 |
Q |
| |
|
||||| || |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| |||||||||| |||||||| |||||||| | || |
|
|
| T |
37678 |
gatgaagatatgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgtggaatatgacgttcaatcag |
37579 |
T |
|
| Q |
242 |
aaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
341 |
Q |
| |
|
||||||||||| | ||||||||||||||||| |||||||| | |||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
37578 |
aaattaacgaagtcgaaagtgatttcgtcgacgaaatggctactcacaaaccactatgttattatgtcatgaataatggatgtgtggaagagcaacatgc |
37479 |
T |
|
| Q |
342 |
agtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||| ||||||||||||||||||| ||||| |
|
|
| T |
37478 |
agtatttgaaaaaccagacacttcgatga |
37450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 53 - 364
Target Start/End: Original strand, 11493 - 11805
Alignment:
| Q |
53 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaa |
152 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| |||| |
|
|
| T |
11493 |
cagaaagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattataaagaaagatcatcccaaagaggatgaagaaa |
11592 |
T |
|
| Q |
153 |
tgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacga |
251 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || || || || |||||||| || ||||||| ||||||||||||||||||| ||| |||| || |
|
|
| T |
11593 |
tgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacctgtggaatacgacgttcagtcggaagttaatga |
11692 |
T |
|
| Q |
252 |
aatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaa |
351 |
Q |
| |
|
| | |||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||| |
|
|
| T |
11693 |
agttgaaagtgacttcgttgacgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaagaacaacatgctgtgtttgaa |
11792 |
T |
|
| Q |
352 |
aaaccagacactt |
364 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
11793 |
aaaccagatactt |
11805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 50 - 360
Target Start/End: Complemental strand, 5716 - 5405
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||| || ||| || ||||||||| | ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| | |
|
|
| T |
5716 |
aagcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaag |
5617 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || |||| ||||||||||||||||||| |||| |||| |
|
|
| T |
5616 |
aaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaattctacctgtggaatacgacgttcagtcagaagttaa |
5517 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtcttt |
348 |
Q |
| |
|
||| | |||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
5516 |
tgaagttgaaagtgacttcgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtcttt |
5417 |
T |
|
| Q |
349 |
gaaaaaccagac |
360 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5416 |
gaaaaaccagac |
5405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 68 - 370
Target Start/End: Original strand, 67003 - 67306
Alignment:
| Q |
68 |
gaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttca |
167 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
67003 |
gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca |
67102 |
T |
|
| Q |
168 |
ctggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgattt |
266 |
Q |
| |
|
||||||||||||| |||||||| ||||| || |||||||| || ||||||| ||||||||||||||||||| |||| |||| ||| | |||||||| || |
|
|
| T |
67103 |
ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgactt |
67202 |
T |
|
| Q |
267 |
cgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttg |
366 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||| | |
|
|
| T |
67203 |
cgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgttgtctttgaaaaaccagacgcttcg |
67302 |
T |
|
| Q |
367 |
atga |
370 |
Q |
| |
|
|||| |
|
|
| T |
67303 |
atga |
67306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 45 - 364
Target Start/End: Complemental strand, 126943 - 126623
Alignment:
| Q |
45 |
agggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggagga |
144 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| |||||| |||| ||||||||||| |||||||||| ||| || ||||||||||||||||| ||||| |
|
|
| T |
126943 |
agggaaagcagaaagcggtgttcgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattttaaagaaagatcatcccaatgagga |
126844 |
T |
|
| Q |
145 |
tgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaa |
243 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||| ||||| || || || || |||||||| || ||||||| ||||||||||||||| ||| ||| |
|
|
| T |
126843 |
tgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacctgtggaatacgacgtttagtcggaa |
126744 |
T |
|
| Q |
244 |
attaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcag |
343 |
Q |
| |
|
|||||||| | |||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || | |
|
|
| T |
126743 |
gttaacgaagttgaaagtgacttcatcgacgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaagaacaacacgccg |
126644 |
T |
|
| Q |
344 |
tctttgaaaaaccagacactt |
364 |
Q |
| |
|
| |||||||||||||| |||| |
|
|
| T |
126643 |
tatttgaaaaaccagatactt |
126623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 50 - 370
Target Start/End: Complemental strand, 139151 - 138830
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||| |||| ||||| || || ||||||||||| |||||||| |||||||| |||||||| | |
|
|
| T |
139151 |
aagcagagagctgtattcgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatcttaaagaaagaccatcccaaagaggatgaag |
139052 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||| ||| ||||||| || |||||||||||||||| |||| |||| |
|
|
| T |
139051 |
aaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttcaatcctacctgtagaatacgacgttcagtcagaagttaa |
138952 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtcttt |
348 |
Q |
| |
|
||| | |||||||| |||||||| |||||||| | |||||||||||||| |||||||||||||||||| |||||| ||||| |||||||| |||||| |
|
|
| T |
138951 |
tgaagttgaaagtgacttcgtcgacgaaatggcgacacacaagccactatgttattatgtcatgaataatagttgtgtagaagaacaacatgctgtcttt |
138852 |
T |
|
| Q |
349 |
gaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||| |||||||||| ||||| |
|
|
| T |
138851 |
gaaaagccagacacttcgatga |
138830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 58 - 359
Target Start/End: Original strand, 5065 - 5367
Alignment:
| Q |
58 |
agctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgact |
157 |
Q |
| |
|
|||||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
5065 |
agctgttttcgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaaggaggatgaagaaatgact |
5164 |
T |
|
| Q |
158 |
tcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatgg |
256 |
Q |
| |
|
|| ||||||||||||||||||| |||||||||||||| || |||||||| || || |||| |||||||||||||||| || |||| |||| ||| | | |
|
|
| T |
5165 |
tcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggtatcaattctacctgtggaatacgacgttctgtcagaagttaatgaagttg |
5264 |
T |
|
| Q |
257 |
aaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaacc |
356 |
Q |
| |
|
||||||| ||||| || |||||||| | || ||||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
5265 |
aaagtgacttcgttgacgaaatggctacgcataagccactatgttattatgtcatgaataatggttgtgtggaagaacaacatgctgtctttgaaaaacc |
5364 |
T |
|
| Q |
357 |
aga |
359 |
Q |
| |
|
||| |
|
|
| T |
5365 |
aga |
5367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 50 - 347
Target Start/End: Complemental strand, 22806016 - 22805718
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||| |||||| || ||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| | |
|
|
| T |
22806016 |
aagcagagagctgtatttgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaag |
22805917 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaa |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| ||||| || |||||||| || ||||||| ||||||||||||||||||| |||| |||| |
|
|
| T |
22805916 |
aaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacctgtggaatacgacgttcagtcagaagttaa |
22805817 |
T |
|
| Q |
249 |
cgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctt |
347 |
Q |
| |
|
||| | |||||||| ||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||| |
|
|
| T |
22805816 |
tgaagttgaaagtgacatcgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctt |
22805718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 220 - 359
Target Start/End: Complemental strand, 41380405 - 41380266
Alignment:
| Q |
220 |
gtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatg |
319 |
Q |
| |
|
||||||||||| || |||| | ||||||| ||| | |||||||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
41380405 |
gtggaatacgatgtccagtcaaaaattaatgaagtcgaaagtgacttcgtcgatgagatggcaactcacaaaccactgtgctattatgtcatgaataatg |
41380306 |
T |
|
| Q |
320 |
gttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
359 |
Q |
| |
|
| |||| |||||| |||||||| || || ||||| ||||| |
|
|
| T |
41380305 |
gctgtgtggaagaacaacatgcggttttcgaaaagccaga |
41380266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 41380507 - 41380418
Alignment:
| Q |
44 |
gagggtaagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcat |
133 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| |||||||| ||| |||| || |||||||||||||| ||||||||||||||| |
|
|
| T |
41380507 |
gagggcaagcagaaagctgtgttcgagatggttaagaagccagcaacagagcgaatttcacccccattgtcaattttgaagaaagatcat |
41380418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 22508100 - 22508072
Alignment:
| Q |
142 |
ggatgaggaaatgacttcaaatttcactg |
170 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22508100 |
ggatgaggaaatgacttcaaatttcactg |
22508072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 57 - 359
Target Start/End: Original strand, 14463 - 14766
Alignment:
| Q |
57 |
aagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgac |
156 |
Q |
| |
|
||||||| |||||||||||||| |||||||| ||||| |||||||| || || || ||||| ||||||| ||||||||| ||||||||||| |||||||| |
|
|
| T |
14463 |
aagctgttttcgaaatggttaaaaaaccagccacggaaagaatctcccctcccttatcaattttgaagagagatcatcctaaggaggatgaagaaatgac |
14562 |
T |
|
| Q |
157 |
ttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatg |
255 |
Q |
| |
|
||| ||||||||||||||| |||| |||||||| ||| | || ||||| || || | | | ||||||||||||||||||| |||| |||| ||| | |
|
|
| T |
14563 |
ttcgaatttcactggatctaaccccagtctcgatataatatgcaatgtcgtgtcagttttgcctgtggaatacgacgttcagtcagaagttaatgaagtt |
14662 |
T |
|
| Q |
256 |
gaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaac |
355 |
Q |
| |
|
|||||||| ||| |||| |||||||| | || |||||| ||||||||||||||||||| ||||| |||| || || |||||||| |||||||||| || |
|
|
| T |
14663 |
gaaagtgacttcatcgacgaaatggccacccataagccattatgctattatgtcatgaacaatggctgtgttgaggaacaacatgctgtctttgaaagac |
14762 |
T |
|
| Q |
356 |
caga |
359 |
Q |
| |
|
|||| |
|
|
| T |
14763 |
caga |
14766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 69632 - 69781
Alignment:
| Q |
221 |
tggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatgg |
320 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| | | ||||||||||||||||||||| |
|
|
| T |
69632 |
tggaatacgatgttcagtcagaaattaacgaagtggaaagtgatttcgtcgatgaaatggcaactcacaagccattgtactattatgtcatgaataatgg |
69731 |
T |
|
| Q |
321 |
ttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttgatga |
370 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||||||| |||| ||||| |
|
|
| T |
69732 |
ttgtgtagaagagcaacatccagtcttcgaaaaaccagatacttcgatga |
69781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 50 - 207
Target Start/End: Complemental strand, 159243 - 159086
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||||||| || || ||||||||||| || |||||||| || |||||||| || || || ||||||||||||||| | ||||||||||||||||| | |
|
|
| T |
159243 |
aagcagaaagccgtttttgaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatcttgaagaaaaaccatcccaaggaggatgaag |
159144 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt |
207 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
159143 |
aaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt |
159086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 359
Target Start/End: Complemental strand, 156555 - 156416
Alignment:
| Q |
220 |
gtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatg |
319 |
Q |
| |
|
||||||||| ||||||||| |||| |||| ||| | |||||||| ||||| |||||||||| | || ||||||||||| |||||||| ||||| |||| |
|
|
| T |
156555 |
gtggaatacaacgttcagtcagaagttaatgaagttgaaagtgacttcgttgatgaaatggtgacgcataagccactatgttattatgttatgaacaatg |
156456 |
T |
|
| Q |
320 |
gttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
359 |
Q |
| |
|
|||||| ||||| ||||||| || |||||||| ||||| |
|
|
| T |
156455 |
gttgtgttgaagaacaacatgttgtttttgaaaagccaga |
156416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 113 - 359
Target Start/End: Original strand, 33627 - 33874
Alignment:
| Q |
113 |
tcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tcta |
211 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
33627 |
tcaatcttgaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtgcaatgtggtgtcag |
33726 |
T |
|
| Q |
212 |
tcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcat |
311 |
Q |
| |
|
| | | ||||||||||| ||||||| || |||| ||| | |||||||| ||| ||| |||||||| | || |||||| |||||||||||||||| |
|
|
| T |
33727 |
ttttgcctgtggaatacgatgttcagtcgaaagttaatgaagttgaaagtgacttcaccgacgaaatggcgacacataagccattatgctattatgtcat |
33826 |
T |
|
| Q |
312 |
gaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
359 |
Q |
| |
|
||| ||||| |||| ||||| |||||||| || |||||| ||||||| |
|
|
| T |
33827 |
gaacaatggctgtgttgaagaacaacatgctgtttttgaataaccaga |
33874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 172 - 359
Target Start/End: Original strand, 4273 - 4461
Alignment:
| Q |
172 |
atctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtc |
270 |
Q |
| |
|
||||||||| |||||||||||||| || |||| ||| || ||||||| ||||||||||| ||||| | |||| |||| ||| | |||||||| ||||| |
|
|
| T |
4273 |
atctgaccccagtctcgacatagtatgcaatgcggtatcaatcctacatgtggaatacgaagttcaatcagaagttaatgaagttgaaagtgacttcgtt |
4372 |
T |
|
| Q |
271 |
gatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
359 |
Q |
| |
|
|| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||| |
|
|
| T |
4373 |
gacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctttgaaaagccaga |
4461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 1874 - 2001
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||||| ||||||| | |
|
|
| T |
1874 |
aagcagagagctgttttcgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaagtaggatgaag |
1973 |
T |
|
| Q |
150 |
aaatgacttcaaatttcactggatctga |
177 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |
|
|
| T |
1974 |
aaatgacttcgaatttcactgggtctga |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 65268 - 65376
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||| |||||||| | |
|
|
| T |
65268 |
aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag |
65367 |
T |
|
| Q |
150 |
aaatgactt |
158 |
Q |
| |
|
||||||||| |
|
|
| T |
65368 |
aaatgactt |
65376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 74446 - 74554
Alignment:
| Q |
50 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgagg |
149 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||| |||||||| | |
|
|
| T |
74446 |
aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag |
74545 |
T |
|
| Q |
150 |
aaatgactt |
158 |
Q |
| |
|
||||||||| |
|
|
| T |
74546 |
aaatgactt |
74554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 325
Target Start/End: Original strand, 75405 - 75660
Alignment:
| Q |
71 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
170 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||| | |
|
|
| T |
75405 |
atggttaaaaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcaaatttcacag |
75504 |
T |
|
| Q |
171 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
269 |
Q |
| |
|
||||||| | |||||||| ||||| || |||||||| || | | | | ||||| ||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
75505 |
aatctgactcaagtctcgatatagtatgcaatgtggtatcagtattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttac |
75604 |
T |
|
| Q |
270 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
325 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
75605 |
cgatgaaatggctatccataagccactatgctattatgttatgaacaatggttgtg |
75660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 325
Target Start/End: Original strand, 83834 - 84089
Alignment:
| Q |
71 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
170 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||||| ||| | || |||||||| ||||||| ||||||||||| | |
|
|
| T |
83834 |
atggttataaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacag |
83933 |
T |
|
| Q |
171 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
269 |
Q |
| |
|
||||||||| |||||||| ||||| || |||||||| || | | | | ||||| ||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
83934 |
aatctgacccaagtctcgatatagtatgcaatgtggtatcagtattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttac |
84033 |
T |
|
| Q |
270 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
325 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
84034 |
cgatgaaatggctatccataagccactatgctattatgttatgaacaatggttgtg |
84089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 325
Target Start/End: Original strand, 121506 - 121761
Alignment:
| Q |
71 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
170 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||||| ||| | || |||||||| ||||||| ||||||||||| | |
|
|
| T |
121506 |
atggttataaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacag |
121605 |
T |
|
| Q |
171 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
269 |
Q |
| |
|
||||||||| |||||||| ||||| || |||||||| || | | | | ||||| ||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
121606 |
aatctgacccaagtctcgatatagtatgcaatgtggtatcagtattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttac |
121705 |
T |
|
| Q |
270 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
325 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
121706 |
cgatgaaatggctatccataagccactatgctattatgttatgaacaatggttgtg |
121761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 325
Target Start/End: Original strand, 148936 - 149016
Alignment:
| Q |
245 |
ttaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
325 |
Q |
| |
|
|||||||| | ||||||||||| |||||||||||| || || |||||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
148936 |
ttaacgaagtagaaagtgattttaccgatgaaatggctatccataagccattatgctattatgttatgaacaatggttgtg |
149016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 42379 - 42285
Alignment:
| Q |
113 |
tcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt |
207 |
Q |
| |
|
||||| ||||||||| ||||||| ||||||||||| |||||||| || |||||||||| |||||| || |||||||| |||||||| |||||||| |
|
|
| T |
42379 |
tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggt |
42285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 48987 - 48913
Alignment:
| Q |
119 |
ttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacata |
193 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| || || ||| ||| ||||||||| |||||||||||| |
|
|
| T |
48987 |
ttgaagaaagatcatccaaaggaggatgaagaaatgacgtcgaacttctctgaatctgacccaagtctcgacata |
48913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 127110 - 127000
Alignment:
| Q |
250 |
gaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttg |
349 |
Q |
| |
|
||||| |||||||||||| ||||||||||| ||||| |||||| ||||||||||||| |||||||||||| ||| ||||| ||||| || || || | |
|
|
| T |
127110 |
gaaatagaaagtgatttcactgatgaaatggcgattcataagccattatgctattatgttatgaataatggtggtgttgaagatcaacacgccgtattcg |
127011 |
T |
|
| Q |
350 |
aaaaaccagac |
360 |
Q |
| |
|
||| ||||||| |
|
|
| T |
127010 |
aaagaccagac |
127000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0423
Description:
Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 5125 - 5228
Alignment:
| Q |
56 |
aaagctgtgttcgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatga |
155 |
Q |
| |
|
|||||||| |||||||||||||| || | |||| |||| |||||||| || || || ||||||| |||||||| |||||||| | |||||| ||||||| |
|
|
| T |
5125 |
aaagctgttttcgaaatggttaaaaagctagcagcggaaagaatctcacctcccttatcaatctctaagaaagaccatcccaaagtggatgaagaaatga |
5224 |
T |
|
| Q |
156 |
cttc |
159 |
Q |
| |
|
|||| |
|
|
| T |
5225 |
cttc |
5228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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