View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13498_high_7 (Length: 487)

Name: NF13498_high_7
Description: NF13498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13498_high_7
NF13498_high_7
[»] chr7 (55 HSPs)
chr7 (318-465)||(56330-56477)
chr7 (318-465)||(20478042-20478189)
chr7 (318-465)||(27666042-27666189)
chr7 (312-462)||(29996494-29996644)
chr7 (318-437)||(35401969-35402088)
chr7 (318-437)||(35403589-35403708)
chr7 (318-462)||(39859209-39859353)
chr7 (318-437)||(20479689-20479808)
chr7 (318-465)||(37115503-37115650)
chr7 (317-462)||(6602334-6602479)
chr7 (317-437)||(77984-78104)
chr7 (321-437)||(27664433-27664549)
chr7 (311-465)||(24228386-24228540)
chr7 (318-437)||(13169653-13169772)
chr7 (318-465)||(38474120-38474267)
chr7 (321-454)||(34776903-34777036)
chr7 (317-465)||(30940402-30940550)
chr7 (318-437)||(47384294-47384413)
chr7 (321-438)||(37796185-37796302)
chr7 (317-462)||(45359335-45359480)
chr7 (321-437)||(39857648-39857764)
chr7 (318-465)||(47386186-47386333)
chr7 (313-437)||(37113936-37114060)
chr7 (319-378)||(29994907-29994966)
chr7 (319-437)||(24226582-24226700)
chr7 (340-462)||(13168142-13168267)
chr7 (317-435)||(23904582-23904700)
chr7 (317-433)||(38549546-38549662)
chr7 (318-437)||(22155817-22155936)
chr7 (318-437)||(22211732-22211851)
chr7 (321-435)||(48227913-48228027)
chr7 (321-407)||(6605397-6605483)
chr7 (318-437)||(46437107-46437226)
chr7 (317-379)||(23906295-23906357)
chr7 (328-438)||(33038801-33038911)
chr7 (364-465)||(35693347-35693450)
chr7 (367-438)||(366747-366818)
chr7 (374-425)||(7401949-7402000)
chr7 (322-433)||(35691431-35691542)
chr7 (355-454)||(45463707-45463806)
chr7 (328-438)||(46996706-46996816)
chr7 (327-431)||(13039618-13039722)
chr7 (318-437)||(34774998-34775117)
chr7 (318-437)||(45361246-45361365)
chr7 (328-438)||(27955380-27955490)
chr7 (328-420)||(38613503-38613595)
chr7 (328-416)||(47341712-47341800)
chr7 (318-349)||(35693434-35693465)
chr7 (368-438)||(2167529-2167599)
chr7 (328-438)||(23953815-23953925)
chr7 (381-454)||(4322560-4322633)
chr7 (365-438)||(11682828-11682901)
chr7 (321-370)||(13018036-13018085)
chr7 (364-437)||(35344295-35344368)
chr7 (328-424)||(46812600-46812696)
[»] chr8 (58 HSPs)
chr8 (314-465)||(27691150-27691301)
chr8 (315-465)||(27406894-27407044)
chr8 (311-465)||(33708801-33708954)
chr8 (318-465)||(13282478-13282625)
chr8 (336-465)||(15305815-15305944)
chr8 (336-465)||(15486184-15486313)
chr8 (318-462)||(8609787-8609931)
chr8 (318-462)||(13108336-13108480)
chr8 (318-437)||(601674-601793)
chr8 (313-437)||(33762683-33762807)
chr8 (318-462)||(38547228-38547372)
chr8 (318-407)||(29237151-29237240)
chr8 (318-407)||(29239187-29239276)
chr8 (310-437)||(8608229-8608357)
chr8 (321-465)||(42941777-42941921)
chr8 (318-437)||(27692807-27692926)
chr8 (318-437)||(33761069-33761188)
chr8 (318-437)||(38548801-38548920)
chr8 (319-437)||(33707207-33707325)
chr8 (318-437)||(35509214-35509333)
chr8 (318-437)||(35510789-35510908)
chr8 (318-407)||(13106804-13106893)
chr8 (318-407)||(15308261-15308350)
chr8 (318-407)||(15488630-15488719)
chr8 (321-437)||(13283965-13284081)
chr8 (321-465)||(41825641-41825785)
chr8 (318-465)||(41042581-41042728)
chr8 (318-437)||(42943396-42943515)
chr8 (316-465)||(22272332-22272483)
chr8 (321-465)||(26242311-26242455)
chr8 (318-465)||(13486096-13486243)
chr8 (318-465)||(7745109-7745256)
chr8 (318-437)||(26238726-26238845)
chr8 (321-407)||(27404213-27404299)
chr8 (256-317)||(18645752-18645813)
chr8 (317-399)||(34681074-34681156)
chr8 (319-424)||(5036446-5036551)
chr8 (318-437)||(22273861-22273980)
chr8 (318-437)||(41823890-41824009)
chr8 (331-465)||(9673162-9673296)
chr8 (317-377)||(600759-600819)
chr8 (318-437)||(5038032-5038150)
chr8 (318-386)||(13484545-13484613)
chr8 (318-437)||(43262107-43262226)
chr8 (328-454)||(28433704-28433830)
chr8 (328-438)||(31821428-31821538)
chr8 (382-465)||(40339677-40339760)
chr8 (318-437)||(41040720-41040839)
chr8 (364-438)||(11788367-11788441)
chr8 (364-454)||(40020623-40020713)
chr8 (328-438)||(42897778-42897888)
chr8 (381-438)||(37526027-37526084)
chr8 (328-424)||(462388-462484)
chr8 (328-424)||(32822371-32822467)
chr8 (328-424)||(33160166-33160262)
chr8 (354-438)||(33750388-33750472)
chr8 (355-437)||(31201148-31201230)
chr8 (381-438)||(9184446-9184503)
[»] chr5 (39 HSPs)
chr5 (318-465)||(29621758-29621905)
chr5 (314-465)||(42473584-42473735)
chr5 (321-465)||(40780553-40780697)
chr5 (318-465)||(2854304-2854450)
chr5 (318-465)||(24541188-24541336)
chr5 (318-462)||(17574318-17574462)
chr5 (317-465)||(36057590-36057738)
chr5 (316-462)||(7267841-7267987)
chr5 (318-437)||(40782181-40782300)
chr5 (318-437)||(2852886-2853005)
chr5 (312-407)||(7269446-7269541)
chr5 (318-437)||(21842962-21843081)
chr5 (318-437)||(29620138-29620257)
chr5 (318-465)||(34327635-34327782)
chr5 (318-462)||(2179787-2179931)
chr5 (318-437)||(12738706-12738825)
chr5 (318-437)||(12801529-12801648)
chr5 (315-437)||(8541241-8541363)
chr5 (320-437)||(17577905-17578022)
chr5 (317-462)||(30468260-30468405)
chr5 (318-454)||(8539675-8539811)
chr5 (321-465)||(18624985-18625129)
chr5 (318-407)||(30463900-30463989)
chr5 (318-407)||(42471548-42471637)
chr5 (318-437)||(28813735-28813856)
chr5 (321-437)||(28822060-28822176)
chr5 (318-437)||(34328797-34328916)
chr5 (328-438)||(18728606-18728716)
chr5 (328-409)||(43492131-43492212)
chr5 (328-424)||(38596878-38596974)
chr5 (374-425)||(27075876-27075927)
chr5 (364-438)||(32087560-32087634)
chr5 (328-438)||(35395343-35395453)
chr5 (328-438)||(43318064-43318174)
chr5 (318-407)||(32134231-32134320)
chr5 (321-405)||(41493847-41493931)
chr5 (328-438)||(33256410-33256520)
chr5 (364-425)||(19997164-19997225)
chr5 (318-358)||(28819348-28819388)
[»] chr1 (50 HSPs)
chr1 (318-465)||(9121645-9121792)
chr1 (318-465)||(47013059-47013206)
chr1 (321-465)||(33602621-33602765)
chr1 (318-465)||(46583533-46583680)
chr1 (318-462)||(4855946-4856090)
chr1 (318-462)||(34778118-34778262)
chr1 (318-437)||(46582010-46582129)
chr1 (318-407)||(34776569-34776658)
chr1 (316-437)||(37345932-37346053)
chr1 (318-465)||(2869579-2869726)
chr1 (318-437)||(8167942-8168061)
chr1 (318-437)||(8169538-8169657)
chr1 (318-437)||(25276742-25276861)
chr1 (318-407)||(26223587-26223676)
chr1 (318-462)||(6818658-6818802)
chr1 (318-462)||(25278348-25278492)
chr1 (318-462)||(31238475-31238619)
chr1 (318-437)||(9120039-9120158)
chr1 (318-437)||(27089249-27089368)
chr1 (315-462)||(37344339-37344486)
chr1 (318-465)||(27087283-27087430)
chr1 (318-437)||(47011456-47011575)
chr1 (311-420)||(25278975-25279084)
chr1 (318-465)||(51896129-51896276)
chr1 (318-437)||(1444151-1444270)
chr1 (318-465)||(3013447-3013600)
chr1 (317-407)||(4854409-4854499)
chr1 (318-461)||(50556078-50556221)
chr1 (318-437)||(31236819-31236938)
chr1 (329-435)||(33599229-33599335)
chr1 (396-465)||(1442599-1442668)
chr1 (318-437)||(52641888-52642007)
chr1 (318-437)||(2871046-2871165)
chr1 (364-465)||(15104487-15104588)
chr1 (321-409)||(52643648-52643736)
chr1 (318-437)||(37088106-37088225)
chr1 (319-433)||(50554164-50554278)
chr1 (318-379)||(33599187-33599248)
chr1 (319-379)||(1442551-1442611)
chr1 (321-437)||(3011858-3011974)
chr1 (319-379)||(6816866-6816926)
chr1 (318-398)||(25278854-25278934)
chr1 (321-437)||(51894570-51894686)
chr1 (328-438)||(42134492-42134602)
chr1 (318-407)||(23577636-23577725)
chr1 (318-378)||(45044949-45045009)
chr1 (381-454)||(5783427-5783500)
chr1 (368-424)||(18183961-18184017)
chr1 (364-424)||(36895528-36895588)
chr1 (364-437)||(27940654-27940727)
[»] chr4 (50 HSPs)
chr4 (317-465)||(43519423-43519571)
chr4 (317-437)||(4173710-4173830)
chr4 (318-437)||(43507167-43507286)
chr4 (318-437)||(43508623-43508742)
chr4 (319-465)||(49523125-49523271)
chr4 (321-465)||(41761723-41761867)
chr4 (317-437)||(33265980-33266100)
chr4 (318-437)||(319273-319392)
chr4 (318-437)||(5437811-5437930)
chr4 (318-437)||(33264382-33264501)
chr4 (318-437)||(51013856-51013975)
chr4 (318-437)||(833223-833342)
chr4 (318-437)||(5439617-5439736)
chr4 (318-462)||(51011926-51012070)
chr4 (318-437)||(320870-320989)
chr4 (318-437)||(835012-835131)
chr4 (318-437)||(4169686-4169805)
chr4 (309-465)||(41781530-41781686)
chr4 (318-437)||(35401749-35401868)
chr4 (318-462)||(35404425-35404569)
chr4 (317-465)||(48813786-48813934)
chr4 (318-437)||(49524703-49524822)
chr4 (328-437)||(39345574-39345683)
chr4 (318-437)||(20493827-20493946)
chr4 (323-407)||(43521109-43521193)
chr4 (318-437)||(48645255-48645374)
chr4 (337-465)||(48646724-48646852)
chr4 (321-434)||(11601674-11601786)
chr4 (367-465)||(42980684-42980782)
chr4 (312-437)||(11254113-11254238)
chr4 (355-454)||(39083676-39083775)
chr4 (328-424)||(44558511-44558607)
chr4 (355-454)||(5484577-5484676)
chr4 (355-454)||(39921531-39921630)
chr4 (355-454)||(43779855-43779954)
chr4 (312-430)||(2691368-2691485)
chr4 (355-452)||(39189419-39189516)
chr4 (364-437)||(44794765-44794838)
chr4 (319-429)||(20819986-20820096)
chr4 (381-424)||(27624869-27624912)
chr4 (355-454)||(32652136-32652235)
chr4 (318-437)||(42982422-42982541)
chr4 (355-454)||(44994275-44994374)
chr4 (337-424)||(52868167-52868254)
chr4 (364-438)||(35996109-35996183)
chr4 (328-437)||(10372711-10372820)
chr4 (364-437)||(47941857-47941930)
chr4 (321-409)||(2693285-2693373)
chr4 (382-438)||(2827468-2827524)
chr4 (364-424)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (318-465)||(3294-3441)
scaffold0058 (318-465)||(4466-4613)
scaffold0058 (318-437)||(14313-14432)
[»] chr6 (34 HSPs)
chr6 (317-465)||(32455868-32456016)
chr6 (336-463)||(3456766-3456893)
chr6 (318-465)||(13613559-13613706)
chr6 (318-437)||(32518467-32518586)
chr6 (318-462)||(32439071-32439215)
chr6 (318-437)||(3480627-3480746)
chr6 (318-437)||(32454248-32454367)
chr6 (319-465)||(20523367-20523513)
chr6 (318-462)||(32516877-32517021)
chr6 (322-465)||(10568403-10568546)
chr6 (318-437)||(18645074-18645192)
chr6 (321-465)||(7372935-7373079)
chr6 (319-462)||(11355223-11355366)
chr6 (318-438)||(10569888-10570008)
chr6 (318-437)||(13610690-13610808)
chr6 (318-465)||(6899485-6899632)
chr6 (318-407)||(9400035-9400124)
chr6 (312-437)||(11357164-11357289)
chr6 (318-386)||(32437140-32437208)
chr6 (306-437)||(6902868-6902996)
chr6 (371-465)||(9398713-9398807)
chr6 (318-387)||(7371175-7371244)
chr6 (309-437)||(20525304-20525432)
chr6 (318-379)||(8605353-8605414)
chr6 (389-465)||(7049828-7049904)
chr6 (333-437)||(14338480-14338584)
chr6 (355-424)||(3018450-3018519)
chr6 (321-437)||(21068628-21068744)
chr6 (355-454)||(17952030-17952129)
chr6 (322-379)||(7049790-7049847)
chr6 (364-424)||(2968185-2968245)
chr6 (321-356)||(21091109-21091144)
chr6 (328-443)||(35175862-35175977)
chr6 (312-389)||(7051263-7051340)
[»] chr3 (64 HSPs)
chr3 (312-465)||(3152215-3152368)
chr3 (318-465)||(44794208-44794354)
chr3 (324-465)||(2660218-2660359)
chr3 (318-462)||(53190759-53190903)
chr3 (318-437)||(46308807-46308926)
chr3 (318-462)||(27899081-27899225)
chr3 (318-437)||(38193480-38193599)
chr3 (318-437)||(53094243-53094362)
chr3 (318-437)||(54900044-54900163)
chr3 (317-407)||(41979352-41979442)
chr3 (318-435)||(3150252-3150369)
chr3 (318-443)||(41977750-41977875)
chr3 (318-462)||(2226152-2226296)
chr3 (361-465)||(19987591-19987695)
chr3 (318-465)||(21348723-21348870)
chr3 (318-437)||(38191895-38192014)
chr3 (318-437)||(53187742-53187861)
chr3 (318-454)||(54898437-54898573)
chr3 (318-437)||(46310406-46310525)
chr3 (318-437)||(46611273-46611392)
chr3 (318-465)||(51684610-51684757)
chr3 (318-407)||(44795890-44795979)
chr3 (317-465)||(30599915-30600063)
chr3 (318-465)||(17515310-17515457)
chr3 (318-465)||(23293167-23293314)
chr3 (318-433)||(46609149-46609264)
chr3 (318-437)||(53092623-53092742)
chr3 (320-465)||(43765139-43765284)
chr3 (323-435)||(2661880-2661992)
chr3 (318-437)||(28626411-28626530)
chr3 (312-407)||(35903819-35903914)
chr3 (318-437)||(7883328-7883447)
chr3 (318-437)||(23291570-23291689)
chr3 (331-462)||(35905712-35905843)
chr3 (318-437)||(46112487-46112606)
chr3 (321-465)||(42279510-42279654)
chr3 (318-437)||(611192-611311)
chr3 (319-437)||(2378953-2379071)
chr3 (321-462)||(2377032-2377173)
chr3 (313-437)||(44267976-44268100)
chr3 (328-434)||(23774162-23774268)
chr3 (318-437)||(30598337-30598456)
chr3 (318-379)||(7884927-7884988)
chr3 (321-437)||(42282443-42282559)
chr3 (318-434)||(51686367-51686483)
chr3 (317-434)||(48829355-48829472)
chr3 (396-462)||(7884873-7884939)
chr3 (328-438)||(23888776-23888886)
chr3 (328-438)||(40508915-40509025)
chr3 (328-438)||(48633887-48633997)
chr3 (321-435)||(54412519-54412633)
chr3 (364-465)||(46197766-46197867)
chr3 (328-424)||(2977347-2977443)
chr3 (374-438)||(25535253-25535317)
chr3 (318-437)||(21350575-21350694)
chr3 (376-438)||(23876982-23877044)
chr3 (328-438)||(45898352-45898462)
chr3 (328-437)||(17516943-17517052)
chr3 (372-465)||(48830803-48830896)
chr3 (318-398)||(600725-600805)
chr3 (393-465)||(44276193-44276265)
chr3 (318-437)||(46114075-46114195)
chr3 (368-438)||(33113184-33113254)
chr3 (328-408)||(41944586-41944666)
[»] chr2 (39 HSPs)
chr2 (318-465)||(6785978-6786125)
chr2 (318-465)||(37020508-37020655)
chr2 (318-443)||(24208061-24208186)
chr2 (312-465)||(39664745-39664898)
chr2 (318-454)||(16763076-16763212)
chr2 (313-437)||(24205593-24205717)
chr2 (318-437)||(14387349-14387468)
chr2 (318-465)||(40560223-40560370)
chr2 (318-465)||(14389081-14389228)
chr2 (318-437)||(16764581-16764700)
chr2 (318-463)||(44709744-44709889)
chr2 (318-437)||(37022155-37022274)
chr2 (312-437)||(2577450-2577575)
chr2 (318-462)||(19908246-19908391)
chr2 (313-465)||(2766929-2767081)
chr2 (321-465)||(17696209-17696353)
chr2 (318-437)||(40561848-40561967)
chr2 (318-407)||(6783364-6783453)
chr2 (322-465)||(42519202-42519346)
chr2 (317-437)||(39663153-39663273)
chr2 (318-437)||(16376736-16376855)
chr2 (318-430)||(19581414-19581526)
chr2 (321-437)||(19906685-19906801)
chr2 (317-424)||(6797506-6797613)
chr2 (318-465)||(39455169-39455316)
chr2 (317-387)||(34400313-34400383)
chr2 (367-462)||(16377197-16377292)
chr2 (312-437)||(39456750-39456875)
chr2 (355-454)||(11023001-11023100)
chr2 (318-359)||(42517558-42517599)
chr2 (332-424)||(37417287-37417379)
chr2 (321-379)||(6799436-6799494)
chr2 (328-438)||(11315339-11315449)
chr2 (364-438)||(26584821-26584895)
chr2 (374-425)||(4046352-4046403)
chr2 (367-438)||(29909664-29909735)
chr2 (328-434)||(361455-361561)
chr2 (321-438)||(37645490-37645607)
chr2 (368-424)||(15432378-15432434)
[»] scaffold1712 (1 HSPs)
scaffold1712 (318-437)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (318-437)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (321-462)||(1266-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (312-437)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (320-409)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (325-389)||(436272-436336)


Alignment Details
Target: chr7 (Bit Score: 128; Significance: 6e-66; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 56330 - 56477
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||| ||| |||||||||| |||||||| |||||||||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 20478042 - 20478189
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 27666189 - 27666042
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||| ||||||||||| |||| | |||||| ||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 312 - 462
Target Start/End: Complemental strand, 29996644 - 29996494
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  29996644 aaaaacgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttaca 29996545  T
Q  412 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||||||||||||  |||||||| || |||| |||||||| |||||||||    
T  29996544 gacgtccatcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 35401969 - 35402088
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35402068  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  35402069 aatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    | |||||   ||||||||||| ||||  ||||||||| |||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 20479808 - 20479689
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 20479709  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  20479708 aatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| ||||||||| ||||||| |  || ||||| |||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 317 - 462
Target Start/End: Original strand, 6602334 - 6602479
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||| |||||||||| ||||||||||| |||||||||| ||  |  |||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  6602334 ggactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 6602433  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6602434 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 317 - 437
Target Start/End: Complemental strand, 78104 - 77984
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||   | | |     
T  78104 ggactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgc 78005  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | |||||||||||||||||||    
T  78004 caatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  421 caaatcagtccctccgt 437  Q
    |||||||||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 311 - 465
Target Start/End: Complemental strand, 24228540 - 24228386
Alignment:
Q  311 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 410  Q
    |||||| || ||||||||||| ||||| |||||||||| |||||| ||| || |||||||||||||||| ||||||||| | |||||| |||||||||||    
T  24228540 taaaaatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttac 24228441  T
Q  411 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||   |||||| |||| ||||  ||| ||||| ||||||||||    
T  24228440 agacgtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||||| ||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
     ||||||   |||| |||||| ||||  ||||||||| ||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 321 - 454
Target Start/End: Complemental strand, 34777036 - 34776903
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||||||||||||| ||| |||||| |||||| ||| || ||| | |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||   ||||||||||| ||||  |||||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagt 34776903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 465
Target Start/End: Complemental strand, 30940550 - 30940402
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||| ||||| || |||||||||| |||||||||| || |||||| || |||||| ||||||||| | ||||||||||||||||||| ||||    
T  30940550 ggactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgt 30940451  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
     |||||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  30940450 tcatcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 47384294 - 47384413
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||||||||||  || || ||||||| |||||||| ||||||||| |||||||||| ||||||   | | |||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtc 47384393  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  47384394 aatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 321 - 438
Target Start/End: Complemental strand, 37796302 - 37796185
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||| ||||||||||||| ||||||| || || |||||||   |||||| ||||||||| | |||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  421 caaatcagtccctccgtc 438  Q
    ||||  ||||||||||||    
T  37796202 caaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 462
Target Start/End: Original strand, 45359335 - 45359480
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||| ||||| |||| |||||||| |||||||||  || | ||||| |||||||| ||||||||| | ||||||| ||||||||||||||||    
T  45359335 ggactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgt 45359434  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||||||   |||||||| || ||||  ||||||||| |||||||    
T  45359435 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  421 caaatcagtccctccgt 437  Q
    |||||||||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 47386333 - 47386186
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||| |||||| ||||||| |  || ||||||| |||||||| ||||||||  | |||||| || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   |||  |||||| ||||  ||||||||| ||||||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 37113936 - 37114060
Alignment:
Q  313 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 412  Q
    |||| ||||||||||||||||||||||||||||||| |||||| ||  || ||| |||||||||||| ||||||||| | ||||||||| |||||   |     
T  37113936 aaaaagactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaa 37114035  T
Q  413 acgtccatcaaatcagtccctccgt 437  Q
    | ||| |||||||||||||||||||    
T  37114036 atgtcaatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 378
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 378  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||| | | || |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  419 atcaaatcagtccctccgt 437  Q
    |||||||||||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 462
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  340 ttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccct---gaattttacagacgtccatcaaatcagtccctccg 436  Q
    ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||   |||||||||||||||||||||||   |||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  437 tctaaaatgtccgttagtagtgatga 462  Q
    || ||||  ||||||||| |||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 23904582 - 23904700
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||||||||||||||||||| |||||||||  || |||||| ||||||||| | ||||| | | ||||||| |||||||   | | ||    
T  23904582 ggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgt 23904681  T
Q  417 ccatcaaatcagtccctcc 435  Q
    | |||||||||||||||||    
T  23904682 caatcaaatcagtccctcc 23904700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 317 - 433
Target Start/End: Original strand, 38549546 - 38549662
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||| ||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||| | ||| |||  ||||||   | | ||    
T  38549546 ggactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgt 38549645  T
Q  417 ccatcaaatcagtccct 433  Q
    |||||||||||||||||    
T  38549646 ccatcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 22155936 - 22155817
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  22155836 aatcaaatcagtccctccgt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 22211851 - 22211732
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  22211751 aatcaaatcagtccctccgt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 48228027 - 48227913
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||| ||||||||| |||||||||  || ||||||  |||||||| ||||||||| | || ||||||||||||   | | ||| ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  421 caaatcagtccctcc 435  Q
    |||||||||||||||    
T  48227927 caaatcagtccctcc 48227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| || |||||||||| ||||||| | | |||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattt-gttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 46437107 - 46437226
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||  |||||||| ||||||| | | || |||| |||||||   | | |||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 46437206  T
Q  418 catcaaatcagtccctccgt 437  Q
     | |||||||||||||||||    
T  46437207 aaccaaatcagtccctccgt 46437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 23906357 - 23906295
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||||||||| ||||||    
T  23906357 ggactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 33038911 - 33038801
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |    ||||  || ||| ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||       
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  33038811 gtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 35693450 - 35693347
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatca--aattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 461  Q
    ||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||   |||||||| || ||||  || |||||| ||||||    
T  35693450 ttcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatg 35693351  T
Q  462 atgt 465  Q
    ||||    
T  35693350 atgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 366747 - 366818
Alignment:
Q  367 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  374 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 425  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 433
Target Start/End: Original strand, 35691431 - 35691542
Alignment:
Q  322 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 421  Q
    ||||||||||||||||||||||||||| |||||||||  || |||||| || |||||| ||||||| | | || |||| |||||||   | | ||| |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  422 aaatcagtccct 433  Q
    ||||||||||||    
T  35691531 aaatcagtccct 35691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 45463707 - 45463806
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 46996816 - 46996706
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||       
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  46996716 gtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 13039722 - 13039618
Alignment:
Q  327 ctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 426  Q
    ||||| |||||||||||||||| |||||||    || ||||||||| |||||| ||||||| | | ||||||||||||||||  | | ||| ||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  427 agtcc 431  Q
    |||||    
T  13039622 agtcc 13039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 34774998 - 34775117
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||| ||||||||| |||||||||  || ||| | | |||||||| | ||||| | | |||||||||||||||   | |  ||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatc 34775097  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  34775098 aatcaaatcagtccctccgt 34775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||| |||||||||||| |||||| ||  ||||| || |||||||||| | |||||   | ||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 27955380 - 27955490
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |   ||| || || ||| ||||| |||||| ||||||||||| ||| |  ||||||||  |||||||||||||||       
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  27955480 gtccctccgtc 27955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 38613595 - 38613503
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||| |||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613595 tcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 47341800 - 47341712
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 47341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 349
Target Start/End: Complemental strand, 35693465 - 35693434
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttg 349  Q
    ||||||||||||||||||||||||||||||||    
T  35693465 gactaatacctcaaattcgtccttgaattttg 35693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 438
Target Start/End: Original strand, 2167529 - 2167599
Alignment:
Q  368 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167529 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 23953815 - 23953925
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||||| |||||| |    |||| ||| ||||||| | |||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  23953815 tcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaag 23953914  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  23953915 gtccctccgtc 23953925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 4322633 - 4322560
Alignment:
Q  381 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  ||||||||||| |||| ||||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgttagt 4322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 438
Target Start/End: Original strand, 11682828 - 11682901
Alignment:
Q  365 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | ||||||||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtc 11682901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 13018036 - 13018085
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtcc 370  Q
    ||||||||||||||| |||||||||||| ||||||| || || |||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcc 13018085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 437
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 437  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 46812696 - 46812600
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    |||| |||||||||||||||| |  | ||||| || ||| ||||| ||||    |||||||||| ||||||||| |||||  |||||||||||||||    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaa 46812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 314 - 465
Target Start/End: Original strand, 27691150 - 27691301
Alignment:
Q  314 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27691150 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaga 27691249  T
Q  414 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||| ||||||||||| |||| |||||| | ||||||||||||    
T  27691250 cgtccatcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 315 - 465
Target Start/End: Complemental strand, 27407044 - 27406894
Alignment:
Q  315 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 414  Q
    |||||||||||||||||| | |||||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  27407044 aaggactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagac 27406945  T
Q  415 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  27406944 gtccatcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 465
Target Start/End: Complemental strand, 33708954 - 33708801
Alignment:
Q  311 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 410  Q
    |||| |||||||||||||||||||| |||||||||||| ||||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  33708954 taaataggactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttac 33708856  T
Q  411 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    | |||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  33708855 aaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 336 - 465
Target Start/End: Original strand, 15305815 - 15305944
Alignment:
Q  336 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 435  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  436 gtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||| ||||| |||||||  |||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 336 - 465
Target Start/End: Original strand, 15486184 - 15486313
Alignment:
Q  336 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 435  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  436 gtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||| ||||| |||||||  |||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 8609931 - 8609787
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  | ||||||| |||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 601793 - 601674
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 601694  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  601693 aatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 33762807 - 33762683
Alignment:
Q  313 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 412  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   |     
T  33762807 aaaatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaa 33762708  T
Q  413 acgtccatcaaatcagtccctccgt 437  Q
    | ||| ||||||||| |||||||||    
T  33762707 atgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 462
Target Start/End: Original strand, 38547228 - 38547372
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||| |||||||||||||||| |||||||||| || | ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   |||||||| || ||||  ||||||||| |||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 407
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 8608229 - 8608357
Alignment:
Q  310 ataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctg-aatttttcgaaatatcaaattagtccctgaatttt 408  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||     
T  8608229 ataaaaaggactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattta 8608328  T
Q  409 acagacgtccatcaaatcagtccctccgt 437  Q
      | | ||| |||||||||||||||||||    
T  8608329 taaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 321 - 465
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||  | ||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||  |||||||||||| ||||| ||||||||| | ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 27692926 - 27692807
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  418 catcaaatcagtccctccgt 437  Q
     || ||||||||||||||||    
T  27692826 aattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 38548920 - 38548801
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | |  ||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  38548820 aatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 33707207 - 33707325
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||     
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  419 atcaaatcagtccctccgt 437  Q
    |||||||||||| ||||||    
T  33707307 atcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 35509214 - 35509333
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||||||||| |||||    
T  35509314 aatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 407
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 407
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 13284081 - 13283965
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  421 caaatcagtccctccgt 437  Q
    |||||||||||||||||    
T  13283981 caaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 321 - 465
Target Start/End: Complemental strand, 41825785 - 41825641
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| |||||||    || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   ||| ||||||| ||||  || |||||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||| |||| |||||||||||||| |||||| ||| || || |||||||||||||  |||||||| | |||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 316 - 465
Target Start/End: Original strand, 22272332 - 22272483
Alignment:
Q  316 aggactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 413  Q
    ||||||||||||||||||||||| ||||||||| |||||  || |  || |||||||||||||||| || |||||| | ||||||||||||||||||| |    
T  22272332 aggactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaa 22272431  T
Q  414 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||  ||||||||| || ||||  ||||||||| ||||||||||    
T  22272432 cgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 321 - 465
Target Start/End: Complemental strand, 26242455 - 26242311
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||||||| ||||| |||||||||| ||||||| || || ||||||||| |||||| ||||||||| | |||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   ||||||||||| ||||  ||||||||| | ||||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 13486243 - 13486096
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| || |||||||||| |||||||||  |  |||||| ||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||| ||| ||||  ||| ||||||||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 7745256 - 7745109
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||| ||||||||| ||||||| || || |||||| ||||||||| ||||||||  | |||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   |||||||| || ||||  ||||||||| ||||||||||    
T  7745156 catcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  418 catcaaatcagtccctccgt 437  Q
    ||||||||||||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 407
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 18645752 - 18645813
Alignment:
Q  256 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645752 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 18645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 34681156 - 34681074
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtcc 399  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||    
T  34681156 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 424
Target Start/End: Original strand, 5036446 - 5036551
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    ||||||||||||||||||||||| |||||| ||||||| |  || ||||||||||||||||  |||||||| | ||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  419 atcaaa 424  Q
    ||||||    
T  5036546 atcaaa 5036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 22273980 - 22273861
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||| ||||||||| | ||||||| | |||||||||||||||   | | |||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtc 22273881  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  22273880 aatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 41823890 - 41824009
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 41823989  T
Q  418 catcaaatcagtccctccgt 437  Q
    ||||||||||||||||||||    
T  41823990 catcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 465
Target Start/End: Complemental strand, 9673296 - 9673162
Alignment:
Q  331 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 430  Q
    ||||||||||||||| || |  |||  || || ||||||||||||||||  |||||||| | ||| ||||||||||||||||||||||||||||   |||    
T  9673296 aattcgtccttgaatcttcatcaattagctaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtc 9673197  T
Q  431 cctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||||  | ||||||| ||||||||||    
T  9673196 cctccgtctaaaagcttcgttagtggtgatgatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 600759 - 600819
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatt 377  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  600759 ggactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || ||||| | |||||||| ||||||| | | |||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 386
Target Start/End: Original strand, 13484545 - 13484613
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 386  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 43262226 - 43262107
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||| |||||| ||||||| || || |||| |||| |||||| ||||||||| | |||||||  ||||||   | | |||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 43262127  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||| ||||||    
T  43262126 aatcaaatcagtctctccgt 43262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 454
Target Start/End: Complemental strand, 28433830 - 28433704
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||| ||||||| |||||||| ||  |||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |      
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  428 gtccctccgtctaaaatgtccgttagt 454  Q
    ||||||||||| |||| || |||||||    
T  28433730 gtccctccgtccaaaaggttcgttagt 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 31821428 - 31821538
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| | |  ||||  || ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||       
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  31821528 gtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 465
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  382 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||| | ||||||| ||||||||||||| ||||||||||   |||||| | || ||||  ||||||||||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 41040720 - 41040839
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |||||  ||||||||| | ||||| | | || |||| |||||||   | | |||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||| ||||||||||    
T  41040820 aatcaaatcggtccctccgt 41040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 438
Target Start/End: Original strand, 11788367 - 11788441
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 454
Target Start/End: Complemental strand, 40020713 - 40020623
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 40020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 42897888 - 42897778
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||| |||||||||||||| |    ||||| || ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||       
T  42897888 tcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 42897789  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  42897788 gtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  381 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 462484 - 462388
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||||| ||||||||| | | |||||| || ||| ||| | |||| | ||||||||||| ||||||| |||||||  || ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaa 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 424
Target Start/End: Original strand, 32822371 - 32822467
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    |||| |||||||||||||||| |   |||||| || ||| ||||| |||| ||  ||||||||| |||||||||||||||  |||| ||||||||||    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaa 32822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 33160262 - 33160166
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||||||||||||||| | |  ||||| || ||| ||||| |||| |  |||||||||| |||||| ||||||||  |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaa 33160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 438
Target Start/End: Complemental strand, 33750472 - 33750388
Alignment:
Q  354 atcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    |||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   |||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtc 33750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 437
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 437  Q
    ||||| || ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  381 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 3e-61; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 29621905 - 29621758
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 314 - 465
Target Start/End: Complemental strand, 42473735 - 42473584
Alignment:
Q  314 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 413  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  42473735 aaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacaga 42473636  T
Q  414 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||||||||| |||||| |||||||||||||  |||||||||||    
T  42473635 cgtccatcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 321 - 465
Target Start/End: Original strand, 40780553 - 40780697
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||||||||| |||||||||||||  |||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 2854450 - 2854304
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    || |||||  ||||||||||| |||| |||| ||| ||||||||||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 24541336 - 24541188
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  418 catcaaa-tcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||| |||   |||||||| |||| |||  ||| ||||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 462
Target Start/End: Original strand, 17574318 - 17574462
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 317 - 465
Target Start/End: Complemental strand, 36057738 - 36057590
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  36057738 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgt 36057639  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||   ||||||||||| ||||  ||||||| | ||||||||||    
T  36057638 ccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 462
Target Start/End: Original strand, 7267841 - 7267987
Alignment:
Q  316 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 415  Q
    ||||||||||||||||||||||||||||||||| |||||||| | || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  7267841 aggactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacg 7267940  T
Q  416 tccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||||    |||||||||| ||||  ||||||||| |||||||    
T  7267941 tccatcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 40782300 - 40782181
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  40782200 aatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 2852886 - 2853005
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 2852985  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  2852986 aatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 312 - 407
Target Start/End: Complemental strand, 7269541 - 7269446
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269541 aaaaatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 21843081 - 21842962
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 21842982  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  21842981 aatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 29620138 - 29620257
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||   | | |||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  29620238 aatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||  ||||| ||| || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||| ||||||| ||||  || |||||| ||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 462
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||  |||||||| | ||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||| ||||| |||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 315 - 437
Target Start/End: Complemental strand, 8541363 - 8541241
Alignment:
Q  315 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 414  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||| |||||||   | |     
T  8541363 aaggactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaat 8541264  T
Q  415 gtccatcaaatcagtccctccgt 437  Q
    ||| |||||||||||||||||||    
T  8541263 gtcaatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  320 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 419  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  420 tcaaatcagtccctccgt 437  Q
    ||||||||||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 317 - 462
Target Start/End: Complemental strand, 30468405 - 30468260
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||| ||||||||| |||||||||||||||| |||||| ||  || |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||    
T  30468405 ggactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgt 30468306  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  30468305 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 8539675 - 8539811
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||    || ||||| | |||||||| ||||||||| | ||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    |||||||  |||| |||| || ||||  |||||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagt 8539811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 465
Target Start/End: Complemental strand, 18625129 - 18624985
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   |||| |||||| ||||  ||||||||||||||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 42471548 - 42471637
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471548 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 28813856 - 28813735
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 415  Q
    ||||||||||||||||||||||||||||||  |||||  | ||| || ||||||| |||||||| ||||||||| | |||||||||||||||   | | |    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatg 28813757  T
Q  416 tccatcaaatcagtccctccgt 437  Q
    |  |||||||||||||||||||    
T  28813756 taaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| |||||| ||  || |||||||||||||||| ||||||  | | || |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  421 caaatcagtccctccgt 437  Q
    |||||||||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 34328916 - 34328797
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || ||||||| |||||||| | ||||| | | || |||| |||||||   | | |||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 34328817  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||| ||||||    
T  34328816 aatcaaatcagtcgctccgt 34328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 18728716 - 18728606
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  18728616 gtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 409  Q
    |||||||||| ||| |||||| ||||||| || || ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 424
Target Start/End: Original strand, 38596878 - 38596974
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  374 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 425  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 438
Target Start/End: Original strand, 32087560 - 32087634
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 35395343 - 35395453
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||| ||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||       
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  35395443 gtccctccgtc 35395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 43318174 - 43318064
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||       
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  43318074 gtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||||| ||| ||||||||| |||||||  | || ||||||  ||||||||   ||||||| | |||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 405  Q
    ||||||||||| |||||||||||||||| ||||||| || || |||||||   ||||||  |||||||| | ||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 33256410 - 33256520
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| | |  ||||| || ||| ||| | |||| | ||||||||||| ||| ||  |||||||  |||||||||||||||  |    
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  33256510 gtccctccgtc 33256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 425
Target Start/End: Original strand, 19997164 - 19997225
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 425  Q
    ||||||||  |||||||| ||||||||||||| | ||||||||| |||||| | ||||||||    
T  19997164 ttcgtccccaaatttttcaaaatatcaaattacttcctgaatttaacagacattcatcaaat 19997225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 28819348 - 28819388
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcgg 358  Q
    ||||||||| |||||||| |||||||||||| |||||||||    
T  28819348 gactaatacatcaaattcctccttgaatttttaaaaatcgg 28819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 9121792 - 9121645
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9121792 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 9121693  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9121692 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 47013206 - 47013059
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 321 - 465
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 46583680 - 46583533
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||  ||||||||||| |||| |||||||| | ||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 4856090 - 4855946
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||| | |||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 46582010 - 46582129
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46582109  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  46582110 aatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 37346053 - 37345932
Alignment:
Q  316 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 415  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | |    
T  37346053 aggactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 37345954  T
Q  416 tccatcaaatcagtccctccgt 437  Q
    || |||||||||||||||||||    
T  37345953 tcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 8167942 - 8168061
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |   | | |||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtc 8168041  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  8168042 aatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 8169657 - 8169538
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||||| |||||||||    
T  8169557 aatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 6818802 - 6818658
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| ||||  | ||||||| | |||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 25278492 - 25278348
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 31238619 - 31238475
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   |||| || ||| ||||  ||||||||| |||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 9120039 - 9120158
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  9120139 aatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 27089368 - 27089249
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||   | | |||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtc 27089269  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||||||||| |||||    
T  27089268 aatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 462
Target Start/End: Original strand, 37344339 - 37344486
Alignment:
Q  315 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 414  Q
    |||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||  ||||||||||| ||    
T  37344339 aaggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatac 37344438  T
Q  415 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  37344439 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 27087283 - 27087430
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 27087381  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||   | || |||||| ||||  ||||||||| ||||||||||    
T  27087382 ccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 47011456 - 47011575
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||| |||||||||||||    
T  47011556 aatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 25279084 - 25278975
Alignment:
Q  311 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 410  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| || || ||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  25279084 taaaaatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttac 25278985  T
Q  411 agacgtccat 420  Q
    ||||||||||    
T  25278984 agacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 51896276 - 51896129
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||| ||||||||||| ||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||| ||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgt 51896178  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  51896177 ccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 1444270 - 1444151
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||   | | |||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtc 1444171  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  1444170 aatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 3013600 - 3013447
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||| ||| |  || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  418 ------catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
          |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 4854409 - 4854499
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854409 ggactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 461
Target Start/End: Complemental strand, 50556221 - 50556078
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||| ||||||||| ||||||| |  || |||||| ||||||||| ||||||||| | ||||||||| |||||||||||||||    
T  50556221 gactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtc 50556122  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 461  Q
     ||||||   ||||||||||| ||||  ||||||||| ||||||    
T  50556121 tatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 31236819 - 31236938
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||| |||||||||   | |  |    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatat 31236917  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | |||||||||||||||||||    
T  31236918 caatcaaatcagtccctccgt 31236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 435
Target Start/End: Original strand, 33599229 - 33599335
Alignment:
Q  329 caaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcag 428  Q
    ||||||||||||||||||||||||||||||  || ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  429 tccctcc 435  Q
    |||||||    
T  33599329 tccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 1442599 - 1442668
Alignment:
Q  396 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 52641888 - 52642007
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac-agacgt 416  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||  | ||||| ||| || ||||| | | ||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt-cctcaaatttacaaaatgt 52641986  T
Q  417 ccatcaaatcagtccctccgt 437  Q
     ||||||||||||||||||||    
T  52641987 tcatcaaatcagtccctccgt 52642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 2871165 - 2871046
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | || |||  |||||||   | | |||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtc 2871066  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  2871065 aatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 15104487 - 15104588
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 463  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| |||||| ||||  ||| ||||| ||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgat 15104586  T
Q  464 gt 465  Q
    ||    
T  15104587 gt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 321 - 409
Target Start/End: Complemental strand, 52643736 - 52643648
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 409  Q
    ||||||||||||||||||||| |||||| ||||||| |  || |||||||||||||||| ||||||||  | |||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||| |||||||||||| |||||||||| || ||||| |||||||||| ||||||| | | || |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 50554164 - 50554278
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| | | ||||| |||||||||   | | |||     
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  419 atcaaatcagtccct 433  Q
    |||||||||||||||    
T  50554264 atcaaatcagtccct 50554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 33599187 - 33599248
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaatttt 33599248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 1442551 - 1442611
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    |||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttt 1442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 3011858 - 3011974
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||||||||||||||||| |||||| ||||||| |  || ||||| |||||||||| ||||||||| | |||||| ||||||||   | | ||| ||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaat 3011957  T
Q  421 caaatcagtccctccgt 437  Q
    ||||||||||| |||||    
T  3011958 caaatcagtccatccgt 3011974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 6816866 - 6816926
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 6816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 398  Q
    |||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 51894570 - 51894686
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 419  Q
    |||||| |||||||||| |||||||||| |||||| || ||||||| ||| ||||||||| ||||||||  | |||||||||||||||   | | ||| |    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaattt-gtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaa 51894668  T
Q  420 tcaaatcagtccctccgt 437  Q
    ||||||||||||||||||    
T  51894669 tcaaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 42134492 - 42134602
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  42134592 gtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 23577636 - 23577725
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||| |||||||| ||||| |||  |||||||||||  ||||||| || | |||||| ||||||||||||||||||  |||||||    
T  23577636 gactaatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaattt 23577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 378  Q
    ||||||||||||||||||||||||||||||| |||||| ||   | |||||||||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 5783427 - 5783500
Alignment:
Q  381 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  368 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 424
Target Start/End: Complemental strand, 36895588 - 36895528
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 27940654 - 27940727
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 437  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940654 ttcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 317 - 465
Target Start/End: Original strand, 43519423 - 43519571
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  43519423 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgt 43519522  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||| ||||||||||| |||| |||| ||| ||||||||||||    
T  43519523 ccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 317 - 437
Target Start/End: Complemental strand, 4173830 - 4173710
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | ||||    
T  4173830 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgt 4173731  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | ||||| |||||||||||||    
T  4173730 caatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 319 - 465
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    |||||||||||||||||||| ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  419 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 321 - 465
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   ||||||||||| ||||  | ||||||| ||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 317 - 437
Target Start/End: Complemental strand, 33266100 - 33265980
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||   | | ||    
T  33266100 ggactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 33266001  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | |||||||||||||||||||    
T  33266000 caatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 319273 - 319392
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||| ||||||||||||    
T  319373 aatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 5437811 - 5437930
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  5437911 aatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 833223 - 833342
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  833323 aatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 5439736 - 5439617
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  5439636 aatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 462
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||||||||||||| |||||||||  || ||| | | |||||||| ||||||||| | |||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 320989 - 320870
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | |||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||| |||||||||||||    
T  320889 aatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 4169686 - 4169805
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||||| ||||||||| |||||||||||||||||||||||||||   | | |||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 4169785  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||| ||||||||||||    
T  4169786 aatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 309 - 465
Target Start/End: Original strand, 41781530 - 41781686
Alignment:
Q  309 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||| || ||||||||||||||||| || |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||  | |||||||||||||||    
T  41781530 tataataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcaaaatatttatttagtccctgaattt 41781628  T
Q  408 tacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||| |||||||||   ||||||||||| ||||  |||||||||  |||||||||    
T  41781629 tacagacatccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||  |||||||| | ||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||| |||| | |||||||||| |||||||||| || ||||||| | |||||| ||||||||  | ||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    || ||||   |||| |||||| ||||  ||||||||| |||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 465
Target Start/End: Original strand, 48813786 - 48813934
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||||||||||||||||||| ||||||| || || ||  |||||||||||| | ||||||  | ||||| ||||||||||| ||||||    
T  48813786 ggactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgt 48813885  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||   |||||| |||| ||||  || ||| || ||||||||||    
T  48813886 ccatcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 49524822 - 49524703
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||||||||| |||||    
T  49524722 aatcaaatcagtccttccgt 49524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 437
Target Start/End: Original strand, 39345574 - 39345683
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| |||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  428 gtccctccgt 437  Q
    ||| ||||||    
T  39345674 gtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| || ||||| | |||||||| ||||||||| | ||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 323 - 407
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  323 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||| || |||||||||||||||||| |  ||||||||   |||||||| |||||||||||||||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 48645255 - 48645374
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||||||| |  || ||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 48645354  T
Q  418 catcaaatcagtccctccgt 437  Q
    |||||||||||| |||||||    
T  48645355 catcaaatcagtacctccgt 48645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 465
Target Start/End: Complemental strand, 48646852 - 48646724
Alignment:
Q  337 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccg 436  Q
    |||||||||||| |||| || || || ||||||| |||||||  ||||||||| | |||||||||||||||||||||| | |||||||   |||| ||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  437 tctaaaatgtccgttagtagtgatgatgt 465  Q
    || ||||  | ||||||| ||||||||||    
T  48646752 tccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 11601674 - 11601786
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 419  Q
    |||||||| |||||||| |||||||||| ||||||| | |||||||  ||||  |||||| | |||||| | ||||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaattta-tccccaaattttgcaaaatat-atattagtccctgaattttacagacgtcca 11601771  T
Q  420 tcaaatcagtccctc 434  Q
    |||||  ||||||||    
T  11601772 tcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 465
Target Start/End: Original strand, 42980684 - 42980782
Alignment:
Q  367 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||| |||||||| |||||| || | ||||||||| ||||||||||||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 11254113 - 11254238
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||| || | |||| || |||||| ||||||| |   || |||| |||||||   |    
T  11254113 aaaaatgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaa 11254212  T
Q  412 gacgtccatcaaatcagtccctccgt 437  Q
     | ||| |||||||||||||||||||    
T  11254213 aatgtcaatcaaatcagtccctccgt 11254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 39083676 - 39083775
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 44558607 - 44558511
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    |||| |||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 5484577 - 5484676
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 39921531 - 39921630
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 454
Target Start/End: Complemental strand, 43779954 - 43779855
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 430
Target Start/End: Original strand, 2691368 - 2691485
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    |||||||| ||||||||||| ||| || ||||||||| ||||||| || || |||||||   |||||| | ||||||| | ||||||||||||||||  |    
T  2691368 aaaaaggaataatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaa 2691466  T
Q  412 gacgtccatcaaatcagtc 430  Q
     | ||| ||||||||||||    
T  2691467 aatgtcaatcaaatcagtc 2691485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 39189419 - 39189516
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 452  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189419 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 437
Target Start/End: Complemental strand, 44794838 - 44794765
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 437  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794838 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 20819986 - 20820096
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||| |||||||||||||||| ||||||| | |||||||  | ||| |||||| | ||||||  | ||||||||||||||||  | | |||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaattt-attcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtc 20820084  T
Q  418 catcaaatcagt 429  Q
     |||||||||||    
T  20820085 aatcaaatcagt 20820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 424
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  381 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 32652136 - 32652235
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 42982541 - 42982422
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||| | |||||  |||||||||||| ||||||| |  || |||||||||||||||| |||||||   | || |||| |||||||   | | |||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtc 42982442  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  42982441 aatcaaatcagtccctccgt 42982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 454
Target Start/End: Complemental strand, 44994374 - 44994275
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 424
Target Start/End: Complemental strand, 52868254 - 52868167
Alignment:
Q  337 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    |||||||||||| |||||||||  || ||||||  | |||||| ||||||||| | |||||| |||||||| ||||||| | ||||||    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaa 52868167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 438
Target Start/End: Original strand, 35996109 - 35996183
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   |||||||||||    
T  35996109 ttcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtc 35996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 437
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| |    ||||| || || |||||| |||| | ||||||||||| ||  |||||||||||  |||||||||||||||       
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  428 gtccctccgt 437  Q
    ||||||||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 47941857 - 47941930
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 437  Q
    |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941857 ttcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 409
Target Start/End: Complemental strand, 2693373 - 2693285
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 409  Q
    ||||||||||| |||||| ||||||||| ||||||| || || ||  | ||| |||||| ||||||||| | ||||||  |||||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta 2693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 438
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  382 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 424
Target Start/End: Complemental strand, 13451058 - 13450998
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaa 13450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 116; Significance: 8e-59; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 3294 - 3441
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 4466 - 4613
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 317 - 465
Target Start/End: Complemental strand, 32456016 - 32455868
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  32456016 ggactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgt 32455917  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||    
T  32455916 ccatcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 336 - 463
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  336 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 435  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  436 gtctaaaatgtccgttagtagtgatgat 463  Q
    ||| ||||| ||||||| ||||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 13613706 - 13613559
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||| |||||||||||| |||| |||| ||||| ||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 32518586 - 32518467
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   | | |||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 32518487  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  32518486 aatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 32439215 - 32439071
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||| ||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 3480746 - 3480627
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   | | |||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  3480646 aatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 32454248 - 32454367
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  32454348 aatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 319 - 465
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    |||||||| |||||||| |||| ||||||| |||||||||  || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  419 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 462
Target Start/End: Original strand, 32516877 - 32517021
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 322 - 465
Target Start/End: Original strand, 10568403 - 10568546
Alignment:
Q  322 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 421  Q
    ||||| ||||||||||||||||||||| ||||||| |  || ||||||| |||||||  ||||||||  | ||||||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  422 aaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||  |||||||||||| ||||  ||||||||| ||||||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 18645192 - 18645074
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||||| ||||||||||||||||||| |||||||   | | |||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-acaattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtc 18645094  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  18645093 aatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 465
Target Start/End: Complemental strand, 7373079 - 7372935
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||  ||||||||| |||||| ||  || |||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   ||||||||||| ||||  ||| ||||| ||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 462
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    |||||||||||||||||||||||||||||| |||||||||  || |||||| |||||||||  |||||||| | | | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  419 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    | ||||   ||||||||||| ||||  |||| |||| |||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 438
Target Start/End: Complemental strand, 10570008 - 10569888
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| | ||||||| | |||||||  ||||||   | | |||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtc 10569909  T
Q  418 catcaaatcagtccctccgtc 438  Q
    |||||||||||||||||||||    
T  10569908 catcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 13610690 - 13610808
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcg-gcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||| | |||||   | | ||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaattt-gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgt 13610787  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | |||||||||||||||||||    
T  13610788 caatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 6899485 - 6899632
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||||||||||||| ||||||| |  || |||||| || ||||||  |||||||| | ||||||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   |||||| |||| ||||  |||||||||  |||||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 407
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||||||||||||||||||||||||||| |  || ||| ||| |||||||| ||||||||| |||||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 11357289 - 11357164
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  11357289 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 11357190  T
Q  412 gacgtccatcaaatcagtccctccgt 437  Q
     | |||  ||||||||||||||||||    
T  11357189 aatgtcattcaaatcagtccctccgt 11357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 386
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 386  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 6902996 - 6902868
Alignment:
Q  306 tattataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 405  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||| |  || ||||||||| |||||| || |||||| | |||||||  ||||    
T  6902996 tattataaaa--gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcctcgaat 6902900  T
Q  406 tttacagacgtccatcaaatcagtccctccgt 437  Q
    ||   | | |||||||||||||||||||||||    
T  6902899 ttacaaaatgtccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 465
Target Start/End: Original strand, 9398713 - 9398807
Alignment:
Q  371 ctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 387  Q
    |||||||||||||| |||||||||||||||| |||||||||| || || ||||||||||||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 437
Target Start/End: Complemental strand, 20525432 - 20525304
Alignment:
Q  309 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 408  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||| ||  || ||| |||||||||||| | ||||| | | || |||| |||||||     
T  20525432 tataaaaacgactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattta 20525333  T
Q  409 acagacgtccatcaaatcagtccctccgt 437  Q
      | | ||| |||||||||||||||||||    
T  20525332 caaaatgtcaatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 8605414 - 8605353
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||||| ||||||    
T  8605414 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaatttt 8605353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 7049828 - 7049904
Alignment:
Q  389 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||| || ||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 437
Target Start/End: Complemental strand, 14338584 - 14338480
Alignment:
Q  333 ttcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccc 432  Q
    |||||||||||||||| ||||||| || || |||||||   |||||| |||||| || ||||  ||||||||||| ||||||||||||||||   |||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  433 tccgt 437  Q
    |||||    
T  14338484 tccgt 14338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 3018519 - 3018450
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| || |||| |  || |||||||   |||||| ||||||||| | |||||||  ||||||   | | ||| ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  421 caaatcagtccctccgt 437  Q
    |||||||||||||||||    
T  21068728 caaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 454
Target Start/End: Complemental strand, 17952129 - 17952030
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  322 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    |||| ||||||||| |||||||||||| ||||||| || || ||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 424
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 356
Target Start/End: Original strand, 21091109 - 21091144
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatc 356  Q
    |||||||||||||||||||||||||||| |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 443
Target Start/End: Complemental strand, 35175977 - 35175862
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||| |||||||||||||||| |   |||||| || |||||| |  |||||  |||||||||||| ||||||||||||||    |||||||||||| |      
T  35175977 tcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 35175878  T
Q  428 gtccctccgtctaaaa 443  Q
    ||||||||||| ||||    
T  35175877 gtccctccgtccaaaa 35175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 7051340 - 7051263
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 389  Q
    ||||| ||||||||||| |||||||   ||||||||| ||||||| |  || |||||| ||||||||| |||||||||    
T  7051340 aaaaatgactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatc 7051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 312 - 465
Target Start/End: Complemental strand, 3152368 - 3152215
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3152368 aaaaacgactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttaca 3152269  T
Q  412 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  3152268 gacgtccatcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 44794208 - 44794354
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 324 - 465
Target Start/End: Original strand, 2660218 - 2660359
Alignment:
Q  324 tacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaa 423  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  424 atcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||  ||||||||||| |||| ||| |||| ||  ||||||||    
T  2660318 attcgtccctccgtccaaaaggtctgttaataacgatgatgt 2660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 27899225 - 27899081
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||| |||   ||||||||||| ||||  ||||||||| |||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 38193599 - 38193480
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38193500  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||||||||| |||||    
T  38193499 aatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 53094362 - 53094243
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  53094262 aatcaaatgagtccctccgt 53094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 41979442 - 41979352
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979442 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 3150252 - 3150369
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 3150351  T
Q  418 catcaaatcagtccctcc 435  Q
     |||||||||||||||||    
T  3150352 aatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 41977750 - 41977875
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  418 catcaaatcagtccctccgtctaaaa 443  Q
    | |||||   ||||||||||| ||||    
T  41977850 cgtcaaaatggtccctccgtccaaaa 41977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||    |||||||||| ||||  || |||||| |||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 361 - 465
Target Start/End: Complemental strand, 19987695 - 19987591
Alignment:
Q  361 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgat 460  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgat 19987596  T
Q  461 gatgt 465  Q
    |||||    
T  19987595 gatgt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 21348723 - 21348870
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||||||| ||||  || |||||| ||||| ||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 54898437 - 54898573
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    |||||||   ||| ||||||| ||||  |||||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagt 54898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 46310525 - 46310406
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46310426  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||| ||||||||||||    
T  46310425 aatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 51684610 - 51684757
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||||||||||||||||| ||||||| || || ||| |||||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 407
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 317 - 465
Target Start/End: Complemental strand, 30600063 - 30599915
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||||||| |||||| | |||||||| || || ||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  30600063 ggactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgt 30599964  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    | ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  30599963 cgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||| |||||||||||| |||||| ||| || ||| || ||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||| ||| |||||  |||||||| ||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||| || ||||||||| |||||||| || || |||| || |||||||| ||||||||| | ||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 433
Target Start/End: Original strand, 46609149 - 46609264
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||   | | |||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  418 catcaaatcagtccct 433  Q
     |||||||||||||||    
T  46609249 aatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 320 - 465
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  320 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 419  Q
    ||||||||||||||||||||||||||||| |||||||||  || ||||| || ||||||| ||||||||| | |||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  420 tcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||   |||||||| || ||||  ||||||||| ||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 2661992 - 2661880
Alignment:
Q  323 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatca 422  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| ||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  423 aatcagtccctcc 435  Q
    |||||||||||||    
T  2661892 aatcagtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 28626411 - 28626530
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  28626511 aatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 407
Target Start/End: Original strand, 35903819 - 35903914
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903819 aaaaacgactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 7883328 - 7883447
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||   | |  ||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  7883428 aatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 23291570 - 23291689
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||| ||||||||   | | |||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtc 23291669  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  23291670 aatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 331 - 462
Target Start/End: Complemental strand, 35905843 - 35905712
Alignment:
Q  331 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 430  Q
    ||||| |||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   |||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  431 cctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||| ||||  |||| |||| |||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 46112487 - 46112606
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||   |||||||| | ||||||| | ||||||| |||||||||||||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  418 catcaaatcagtccctccgt 437  Q
    |||||||   ||||||||||    
T  46112587 catcaaaatggtccctccgt 46112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 465
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||| ||||||||| ||||||| ||  | |||||| | ||||||| | ||||||| | ||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 611311 - 611192
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||| | | |||| ||||||||||   | | |||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtc 611212  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  611211 aatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 437
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  319 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 418  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| | ||||| | | ||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  419 atcaaatcagtccctccgt 437  Q
    |||||||||||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 321 - 462
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||  ||||||||| |||||| | | || |||||||||||||||| | ||| ||  | |||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||   || |||||||||||||  ||||||||| |||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 44267976 - 44268100
Alignment:
Q  313 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 412  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| || ||| || ||||||||| ||||||| | | || |||| |||||||   |     
T  44267976 aaaatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaa 44268075  T
Q  413 acgtccatcaaatcagtccctccgt 437  Q
    | ||| |||||||||||||||||||    
T  44268076 atgtcaatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 328 - 434
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |  | ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  |    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  428 gtccctc 434  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 30598337 - 30598456
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| | | || |||| |||||||   | | ||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattt-gtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 30598435  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | ||||||| |||||||||||    
T  30598436 caatcaaattagtccctccgt 30598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 42282559 - 42282443
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| ||||||| |  || |||||  ||||||||| ||||||||| | ||||||| |||||||   | | || |||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcat 42282460  T
Q  421 caaatcagtccctccgt 437  Q
     ||||||||||||||||    
T  42282459 taaatcagtccctccgt 42282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 51686483 - 51686367
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||| |||||| ||||||| || || ||||||||| |||||| ||||||||  | |||||||  ||||||   | | ||     
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  418 catcaaatcagtccctc 434  Q
    |||||||||||||||||    
T  51686383 catcaaatcagtccctc 51686367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 48829355 - 48829472
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||||||||||||||||||||||| |||| || || || ||  | |||||||||| ||||||||| | |||||||  | ||||   | | ||    
T  48829355 ggactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgt 48829454  T
Q  417 ccatcaaatcagtccctc 434  Q
    ||||||||||||||||||    
T  48829455 ccatcaaatcagtccctc 48829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  396 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 23888886 - 23888776
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||       
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  23888786 gtccctccgtc 23888776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 40509025 - 40508915
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||       
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  40508925 gtccctccgtc 40508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 48633887 - 48633997
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |    ||||  || ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  48633987 gtccctccgtc 48633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 54412633 - 54412519
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||| ||||||||||||| |||||||| |||||| ||  || ||||||| |||||||| ||| ||||| | ||||| |||||||||   | | ||| ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  421 caaatcagtccctcc 435  Q
    |||||||||||||||    
T  54412533 caaatcagtccctcc 54412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 46197766 - 46197867
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 463  Q
    |||||| ||||||||| | ||||||| | ||||| |||||||||||||||||||||| |||   |||||| |||| ||||  |||||||||  |||||||    
T  46197766 ttcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgat 46197865  T
Q  464 gt 465  Q
    ||    
T  46197866 gt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 2977443 - 2977347
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||||||||||||||| |  ||||||| || ||| ||||| |||| | ||||||||||| | ||||||| |||||  || ||||||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaa 2977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 438
Target Start/End: Complemental strand, 25535317 - 25535253
Alignment:
Q  374 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 21350694 - 21350575
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||| ||| ||| ||||  ||||||||| || |||||  ||||||||| ||||||| | | || |||| |||||||   | | |||    
T  21350694 gactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 21350595  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  21350594 aatcaaatcagtccctccgt 21350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  376 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 45898462 - 45898352
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||||||||||| |||||||| | |  ||| | || || ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  45898362 gtccctccgtc 45898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 437
Target Start/End: Complemental strand, 17517052 - 17516943
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    ||||||||||||||||||||| |||||||||  || ||||| | |||||||| |||||||   | || |||| |||||||   | | ||| |||||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  428 gtccctccgt 437  Q
    ||||||||||    
T  17516952 gtccctccgt 17516943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 465
Target Start/End: Complemental strand, 48830896 - 48830803
Alignment:
Q  372 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||  ||||||||| | ||||||  |||||||||| |||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 398  Q
    |||||||||||||||||| |||||||||||| |||||||| | || || || | |||||||| | ||||||| | ||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 44276265 - 44276193
Alignment:
Q  393 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||| ||||||||||||||| ||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 46114195 - 46114075
Alignment:
Q  318 gactaatacctcaaattcgtccttgaatttt-gaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||| |||||||||||  ||||||||||||  |||||||||| || || |||| |||||||| ||||||||| | ||||||  |||||||   | | ||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgt 46114096  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | |||||||||||| ||||||    
T  46114095 caatcaaatcagtcactccgt 46114075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 438
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  368 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 41944586 - 41944666
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 408  Q
    |||| ||||||| |||||||| |   |||||| || ||||||||  |||||  |||||||||||| |||||||||||||||    
T  41944586 tcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttt 41944666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 6786125 - 6785978
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgt 6785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 37020508 - 37020655
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  418 catcaaatcagtccctccgtctaaaa 443  Q
    ||||||||||||||||||||| ||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 465
Target Start/End: Complemental strand, 39664898 - 39664745
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||| ||||||||| | |||||||||||||||||||    
T  39664898 aaaaatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttaca 39664799  T
Q  412 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  39664798 gacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 16763076 - 16763212
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    |||||||   ||||||||||| ||||| || ||||||    
T  16763176 catcaaaatggtccctccgtccaaaatctctgttagt 16763212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 24205593 - 24205717
Alignment:
Q  313 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 412  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |     
T  24205593 aaaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaa 24205692  T
Q  413 acgtccatcaaatcagtccctccgt 437  Q
    | ||| ||||||| |||||||||||    
T  24205693 atgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 14387349 - 14387468
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 14387448  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  14387449 aatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 40560223 - 40560370
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||| ||||||||||| ||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 14389228 - 14389081
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||||||||||| ||||  | ||||||||||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 16764700 - 16764581
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||| ||||||||||||    
T  16764600 aatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 318 - 463
Target Start/End: Complemental strand, 44709889 - 44709744
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||||||||||||| ||||| |||| || |||| ||||||||||| ||||||| | | |||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 463  Q
    |||||||   ||||||||||| ||||  | ||||||| ||||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 37022274 - 37022155
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  37022174 aatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 2577575 - 2577450
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||   |    
T  2577575 aaaaatgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaa 2577476  T
Q  412 gacgtccatcaaatcagtccctccgt 437  Q
     | ||| ||||||| |||||||||||    
T  2577475 aatgtcaatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaa-tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  417 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    || |||||   ||||||||||| ||||  ||||||||| |||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 313 - 465
Target Start/End: Original strand, 2766929 - 2767081
Alignment:
Q  313 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 412  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||  ||  |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  2766929 aaaatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacag 2767028  T
Q  413 acgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||| ||||||   ||||||| ||| ||||  ||||||||| ||||||||||    
T  2767029 acgtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 321 - 465
Target Start/End: Original strand, 17696209 - 17696353
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||   ||||||| | ||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 407  Q
    ||||||||||||||| | ||||||||||||| |||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 322 - 465
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  322 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||||||||||||||||||||||| |||||| |   || || |||| ||||||||| | ||||||| | ||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    ||||   |||||||| || ||||  ||||||||| ||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 437
Target Start/End: Original strand, 39663153 - 39663273
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | ||    
T  39663153 ggactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgt 39663252  T
Q  417 ccatcaaatcagtccctccgt 437  Q
    | |||||||||||||||||||    
T  39663253 caatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 16376736 - 16376855
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || |||||||||||||||| ||||||| | | |||||||||||||||   | |  ||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  418 catcaaatcagtccctccgt 437  Q
     |||||||||||||||||||    
T  16376836 aatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 19581414 - 19581526
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||||||||||||||||||| |||||| ||||||| || || || ||||||||||||| ||||||||| | |||||||  ||||||  || | |||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtc 19581513  T
Q  418 catcaaatcagtc 430  Q
    |||||||||||||    
T  19581514 catcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 19906685 - 19906801
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    |||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  421 caaatcagtccctccgt 437  Q
    |||||||||||||||||    
T  19906785 caaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 424
Target Start/End: Original strand, 6797506 - 6797613
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 416  Q
    |||||||||||| |||||| |  ||||||||| |||||| ||| || ||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  6797506 ggactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgt 6797605  T
Q  417 ccatcaaa 424  Q
    | ||||||    
T  6797606 ctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 39455169 - 39455316
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    |||||||| |||||||| ||||||||||||| |||||||||  || |||   |||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  418 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 465  Q
    |||||||   ||| ||||||  ||||  ||||||||| | ||||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 34400313 - 34400383
Alignment:
Q  317 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 387  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||| |||||||||||| |||||||    
T  34400313 ggactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaata 34400383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 367 - 462
Target Start/End: Complemental strand, 16377292 - 16377197
Alignment:
Q  367 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||||||||||| | ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  16377292 gtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 39456875 - 39456750
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||| ||  || ||||||| |||||||| | ||||| | | |||||||||||||||   |    
T  39456875 aaaaacgactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataa 39456776  T
Q  412 gacgtccatcaaatcagtccctccgt 437  Q
     | ||| ||||||||||||| |||||    
T  39456775 aatgtcaatcaaatcagtccatccgt 39456750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 454
Target Start/End: Complemental strand, 11023100 - 11023001
Alignment:
Q  355 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 454  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 42517558 - 42517599
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggc 359  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggc 42517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 424
Target Start/End: Original strand, 37417287 - 37417379
Alignment:
Q  332 attcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417287 attcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 6799494 - 6799436
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 379  Q
    ||||| |||||||||||||||||||||| |||||||||  || ||||||| ||||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaatttt 6799436  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 11315449 - 11315339
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||| ||||||||| |||||| |  ||||||| || ||||| ||  |||||  |||||||||||| |||| |||||||||  |||||||||||||||       
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  428 gtccctccgtc 438  Q
    |||||||||||    
T  11315349 gtccctccgtc 11315339  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 438
Target Start/End: Complemental strand, 26584895 - 26584821
Alignment:
Q  364 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 4046352 - 4046403
Alignment:
Q  374 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 425  Q
    ||||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046352 aattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 29909735 - 29909664
Alignment:
Q  367 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 438  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 434
Target Start/End: Original strand, 361455 - 361561
Alignment:
Q  328 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 427  Q
    |||| |||||||||||||||| |  ||||||| ||  || ||||| |||| |  |||||||||||||||||  ||||||   |||||||||||||| | |    
T  361455 tcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaattta 361554  T
Q  428 gtccctc 434  Q
    |||||||    
T  361555 gtccctc 361561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 37645490 - 37645607
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||| ||| |||||||||||||||| ||||||| |   | ||||||| | ||||||  |||||||| | ||||||| |||||||| |||| ||  ||    
T  37645490 taataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttat 37645589  T
Q  421 caaatcagtccctccgtc 438  Q
    ||||   |||||||||||    
T  37645590 caaaattgtccctccgtc 37645607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 15432378 - 15432434
Alignment:
Q  368 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 424  Q
    ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432378 tccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 982 - 1101
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  1082 aatcaaattagtccctccgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 54347 - 54228
Alignment:
Q  318 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 417  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  418 catcaaatcagtccctccgt 437  Q
     ||||||| |||||||||||    
T  54247 aatcaaattagtccctccgt 54228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 321 - 462
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  321 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 420  Q
    ||||||||||||| |||||||||||||| |||||| ||  || ||||||| ||||||||  |||||||| | ||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  421 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 462  Q
    ||||   ||||||||||| ||||  ||||||||| |||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 1650 - 1525
Alignment:
Q  312 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 411  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  1650 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 1551  T
Q  412 gacgtccatcaaatcagtccctccgt 437  Q
     | |||  ||||||||||||||||||    
T  1550 aatgtcattcaaatcagtccctccgt 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 409
Target Start/End: Original strand, 8264 - 8353
Alignment:
Q  320 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 409  Q
    ||||||||||||||||||||||||||||| |||||| ||| || ||||| | |||||||| | ||||||| | |||||||||||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttta 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 436272 - 436336
Alignment:
Q  325 acctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 389  Q
    ||||||||||||| |||||||||| ||||||| || || ||| ||| | |||||| |||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatc 436336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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