View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1350-Insertion-12 (Length: 368)
Name: NF1350-Insertion-12
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 14 - 368
Target Start/End: Complemental strand, 24410407 - 24410046
Alignment:
| Q |
14 |
ttatcatgacctagatgatagaagttaatctgagttcttaactctattttagtgtgccttacaattacaatgatgcatatgataaaacctcattattttt |
113 |
Q |
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| T |
24410407 |
ttatcatgacctagatgatagaagctaatctgagtttttaactctattttagtgtgccttacaattacaatgatgcatatgatataacctcattattttt |
24410308 |
T |
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| Q |
114 |
cactttaacagtaaa-------gcccaacttaaatctttaacttactccatctttaattaaagcttgttagctacttaagcggcagtatacgtggtttgg |
206 |
Q |
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| T |
24410307 |
cactttaacagtaaatagtaaagcccaacttaaatttttaacttactccatctttaattaaagcttgttagctacttaagcgggagtatacgtggtttgg |
24410208 |
T |
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| Q |
207 |
taatacaattactaacatctatgaccgttaatttaaccgacattatttgagtttaataagagacggtttaatgagattactcataaattagcttaggtaa |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||| ||||||||||| ||| |
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| T |
24410207 |
taatacaattactaacatctatgaccgttaatttaaccgacattattcgagtttaataagagacagtttaatggggttactcacaaattagcttaagtag |
24410108 |
T |
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| Q |
307 |
tcctatgtaatcctaaccttcacatatatgatgatgtacgatcatatatttgacttatttta |
368 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| |
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| T |
24410107 |
tcctatgtaatcctagccttcacatatatgatgatgtacgatcatgtatttggcttatttta |
24410046 |
T |
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