View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1350-Insertion-15 (Length: 376)
Name: NF1350-Insertion-15
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350-Insertion-15 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 38125472 - 38125118
Alignment:
| Q |
7 |
agtttgcatctgagttcaaacatcattttgtatattgcacaagaaaaatggtcacaaaggaccctgtgtcaaaattttaagtagcattagcatatgcttt |
106 |
Q |
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| T |
38125472 |
agtttgcatctgagttcaaacatcattttgtatattgcacaagaaaaatggtcacaaaggaccctgtgtcaaaattttaagtagcat------atgcttt |
38125379 |
T |
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| Q |
107 |
aaccatgatcatgtgtgtcagctaattttaatgttgcatactgtgttttctcatgaaggttctgcatatagtacctagatatgcataaaagcttcctgat |
206 |
Q |
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| T |
38125378 |
aaccatgatcatgtgtgacagctaattttaatgttgcatactgtgttttctcatgaaggttctgcatata---cctagatatgcataaaagcttcctgat |
38125282 |
T |
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| Q |
207 |
catggtcaatattggaagcattttcttacaattatgataatgtgaaaagtaaacaaacatgtttagctggagagcaaacagaaagtaagctggataaaac |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38125281 |
catggtcaatattggaagcattttcttacaattatgataatgtgaaaagtaaacaaacatgtttagctggagagcaaacagaaagtaagctggataaaac |
38125182 |
T |
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| Q |
307 |
aatctgagtgctgggtagtatttgtctatctaatctaaagaataaaatattctcaaaagatcagg |
371 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
38125181 |
aatctgagtgctgggtagtatttgtctatctaatct-aagaataaaatattctcaaaagatcagg |
38125118 |
T |
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