View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1350-Insertion-25 (Length: 183)
Name: NF1350-Insertion-25
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350-Insertion-25 |
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Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 8 - 182
Target Start/End: Original strand, 47933616 - 47933790
Alignment:
| Q |
8 |
attcctaccctttgttccttacactgtatcatcaatagtgaaagccttgtatagagttttcagcactgttggcgaccttaactctttttcaccctaagac |
107 |
Q |
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| T |
47933616 |
attcctaccctttgttcattacactgtatcatcaatagtgaaagccttacatagagttttcagcactgttggcgaccttaactctttttcaccctaagac |
47933715 |
T |
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| Q |
108 |
tacactctagcactgatttagtgtgtttgtaaaatattttgaacggaaaagctcctctgttacctttgtttatgg |
182 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47933716 |
tacactctagcactgatttagtgtgtttgtaaaatattttgaacggaaaagctcctctgttacctttgtttatgg |
47933790 |
T |
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