View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13500_low_8 (Length: 268)
Name: NF13500_low_8
Description: NF13500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13500_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 33157410 - 33157308
Alignment:
| Q |
148 |
cctggtactgtcggctaaggaaacatacacactggaccaaaatacctttagctnnnnnnnncatcaatatcccttttaatacttgacctatacatctaca |
247 |
Q |
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| T |
33157410 |
cctggtactgtcggctaaggaaacatacacactggaccaaaatacctttagctaaaaaaaccatcaatatcccttttaatacttgacctatacatctaca |
33157311 |
T |
|
| Q |
248 |
tct |
250 |
Q |
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||| |
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| T |
33157310 |
tct |
33157308 |
T |
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