View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13503_low_1 (Length: 596)

Name: NF13503_low_1
Description: NF13503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13503_low_1
NF13503_low_1
[»] chr5 (19 HSPs)
chr5 (25-558)||(7649736-7650268)
chr5 (24-353)||(14616428-14616756)
chr5 (25-352)||(34405767-34406094)
chr5 (25-227)||(22159663-22159867)
chr5 (31-349)||(33575013-33575331)
chr5 (25-352)||(15532200-15532528)
chr5 (25-350)||(15542384-15542710)
chr5 (25-255)||(26712437-26712669)
chr5 (25-255)||(26982175-26982407)
chr5 (265-352)||(21680634-21680721)
chr5 (265-352)||(33921372-33921459)
chr5 (265-352)||(2499762-2499850)
chr5 (271-344)||(1810198-1810272)
chr5 (86-224)||(11988991-11989133)
chr5 (269-345)||(36330999-36331075)
chr5 (25-90)||(23993320-23993385)
chr5 (310-352)||(9691083-9691125)
chr5 (310-352)||(25185699-25185741)
chr5 (288-339)||(19686465-19686517)
[»] chr7 (20 HSPs)
chr7 (25-352)||(24783327-24783654)
chr7 (25-352)||(6967066-6967393)
chr7 (25-352)||(17866353-17866680)
chr7 (25-244)||(17863202-17863421)
chr7 (25-352)||(36842937-36843264)
chr7 (63-352)||(9765758-9766046)
chr7 (31-149)||(294789-294907)
chr7 (25-185)||(46846479-46846639)
chr7 (25-253)||(11279410-11279639)
chr7 (31-226)||(23313384-23313581)
chr7 (25-253)||(36222406-36222635)
chr7 (25-226)||(3862029-3862225)
chr7 (31-253)||(23759706-23759930)
chr7 (36-223)||(23107917-23108106)
chr7 (265-353)||(17857879-17857968)
chr7 (25-226)||(33312913-33313116)
chr7 (265-352)||(38431669-38431757)
chr7 (265-344)||(3540932-3541011)
chr7 (265-344)||(6964563-6964643)
chr7 (269-343)||(28577687-28577761)
[»] chr1 (25 HSPs)
chr1 (25-352)||(13495906-13496232)
chr1 (25-352)||(13493181-13493508)
chr1 (25-352)||(10764838-10765165)
chr1 (25-352)||(32505857-32506181)
chr1 (25-352)||(39546161-39546486)
chr1 (26-226)||(34066264-34066466)
chr1 (25-227)||(27282230-27282434)
chr1 (31-352)||(16190179-16190499)
chr1 (31-172)||(1936551-1936691)
chr1 (25-158)||(15297251-15297383)
chr1 (25-139)||(22456705-22456818)
chr1 (33-139)||(49147825-49147930)
chr1 (25-146)||(21153174-21153295)
chr1 (265-352)||(34552438-34552525)
chr1 (265-342)||(18392669-18392747)
chr1 (272-339)||(15297492-15297559)
chr1 (397-460)||(48505874-48505937)
chr1 (155-226)||(8435284-8435357)
chr1 (265-352)||(49716647-49716735)
chr1 (265-328)||(49720129-49720192)
chr1 (271-344)||(6206164-6206237)
chr1 (25-72)||(22453415-22453462)
chr1 (25-78)||(23990362-23990415)
chr1 (265-344)||(50196723-50196803)
chr1 (420-460)||(48505811-48505851)
[»] chr6 (25 HSPs)
chr6 (25-352)||(14790537-14790864)
chr6 (25-352)||(14795565-14795892)
chr6 (25-356)||(1838393-1838724)
chr6 (31-208)||(32704398-32704575)
chr6 (25-351)||(19664667-19664991)
chr6 (25-227)||(20527285-20527490)
chr6 (25-352)||(15534975-15535300)
chr6 (81-353)||(27649077-27649347)
chr6 (25-224)||(16883594-16883795)
chr6 (86-352)||(32427281-32427544)
chr6 (25-139)||(12980705-12980818)
chr6 (25-253)||(13017287-13017517)
chr6 (25-146)||(7769594-7769715)
chr6 (26-139)||(12983592-12983704)
chr6 (25-226)||(30978335-30978539)
chr6 (25-352)||(22221642-22221967)
chr6 (25-352)||(22247477-22247802)
chr6 (114-347)||(15540578-15540809)
chr6 (155-224)||(11183962-11184033)
chr6 (271-354)||(33678939-33679025)
chr6 (47-97)||(15540529-15540579)
chr6 (265-352)||(11411039-11411127)
chr6 (352-459)||(32090663-32090777)
chr6 (265-352)||(12747086-12747173)
chr6 (288-339)||(34502636-34502688)
[»] chr4 (17 HSPs)
chr4 (25-344)||(647211-647530)
chr4 (25-344)||(650483-650802)
chr4 (25-352)||(26062690-26063020)
chr4 (25-141)||(26060506-26060622)
chr4 (25-226)||(2541803-2542005)
chr4 (265-354)||(15851450-15851539)
chr4 (25-352)||(12171901-12172218)
chr4 (265-352)||(19929155-19929242)
chr4 (269-337)||(21217350-21217418)
chr4 (265-352)||(33400075-33400163)
chr4 (164-226)||(11649329-11649393)
chr4 (396-477)||(52628956-52629036)
chr4 (89-141)||(11649444-11649496)
chr4 (404-460)||(31979285-31979341)
chr4 (487-553)||(31980626-31980692)
chr4 (164-226)||(26060668-26060732)
chr4 (265-352)||(2542041-2542128)
[»] chr2 (17 HSPs)
chr2 (25-352)||(23673345-23673671)
chr2 (25-353)||(36326845-36327172)
chr2 (25-354)||(16294817-16295145)
chr2 (25-352)||(32575685-32576013)
chr2 (75-253)||(40017948-40018126)
chr2 (25-226)||(31626468-31626671)
chr2 (25-352)||(31528307-31528635)
chr2 (31-253)||(13709995-13710218)
chr2 (265-352)||(24384925-24385014)
chr2 (265-328)||(29436025-29436088)
chr2 (277-344)||(38315809-38315876)
chr2 (410-460)||(40927916-40927966)
chr2 (404-460)||(27409395-27409451)
chr2 (288-339)||(1503204-1503256)
chr2 (288-339)||(1506408-1506460)
chr2 (25-141)||(8427144-8427259)
chr2 (276-324)||(13572070-13572118)
[»] chr3 (21 HSPs)
chr3 (25-352)||(13979405-13979730)
chr3 (26-141)||(46731414-46731529)
chr3 (352-441)||(35091823-35091912)
chr3 (25-226)||(39563634-39563837)
chr3 (443-553)||(35091672-35091783)
chr3 (265-352)||(46731612-46731699)
chr3 (25-352)||(22626312-22626638)
chr3 (25-352)||(11138570-11138896)
chr3 (25-146)||(47412101-47412222)
chr3 (265-353)||(27055149-27055237)
chr3 (265-352)||(19869255-19869343)
chr3 (269-352)||(26822039-26822122)
chr3 (155-226)||(50096829-50096902)
chr3 (25-118)||(35366295-35366387)
chr3 (265-352)||(25492175-25492263)
chr3 (166-226)||(20536459-20536520)
chr3 (288-352)||(3306147-3306213)
chr3 (288-352)||(30157797-30157863)
chr3 (309-358)||(32366877-32366927)
chr3 (310-350)||(4225619-4225659)
chr3 (288-339)||(18883509-18883561)
[»] chr8 (12 HSPs)
chr8 (31-344)||(12575308-12575620)
chr8 (86-352)||(14418445-14418707)
chr8 (25-226)||(41778866-41779068)
chr8 (31-185)||(13096946-13097099)
chr8 (265-352)||(39659712-39659799)
chr8 (265-352)||(9467341-9467429)
chr8 (265-352)||(453863-453951)
chr8 (164-226)||(41836318-41836382)
chr8 (89-141)||(41836433-41836485)
chr8 (56-146)||(44008245-44008335)
chr8 (265-329)||(13332365-13332429)
chr8 (309-343)||(22173710-22173744)
[»] scaffold0363 (1 HSPs)
scaffold0363 (86-352)||(11-273)
[»] scaffold0440 (1 HSPs)
scaffold0440 (25-253)||(9781-10010)
[»] scaffold0567 (1 HSPs)
scaffold0567 (31-163)||(5999-6131)
[»] scaffold0352 (2 HSPs)
scaffold0352 (25-141)||(2814-2930)
scaffold0352 (265-352)||(2619-2706)
[»] scaffold0264 (1 HSPs)
scaffold0264 (25-352)||(24185-24510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (265-352)||(33730-33817)
[»] scaffold0273 (1 HSPs)
scaffold0273 (265-344)||(19517-19596)
[»] scaffold0063 (1 HSPs)
scaffold0063 (31-112)||(7232-7313)
[»] scaffold0500 (1 HSPs)
scaffold0500 (54-112)||(2641-2699)
[»] scaffold0766 (1 HSPs)
scaffold0766 (265-343)||(3664-3739)
[»] scaffold0084 (2 HSPs)
scaffold0084 (309-352)||(19593-19636)
scaffold0084 (309-352)||(29672-29715)
[»] scaffold0126 (1 HSPs)
scaffold0126 (309-343)||(14094-14128)


Alignment Details
Target: chr5 (Bit Score: 429; Significance: 0; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 25 - 558
Target Start/End: Complemental strand, 7650268 - 7649736
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7650268 taggtaaagagattgagtagaattaccttgttaatctatctttaaactagataatcattgattgaattaggagtgcaaattaccatagaagaacttcgta 7650169  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    ||||||||| ||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7650168 ggattcaaatgtcttaaccatacttctctctaatattcttaaaagcaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 7650069  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7650068 caatcaatataaatttatacatcctttttgataaagaaa-ttgttgagtagaaattaacaacggtcctcgtgaatacgaatttatttattacttcgatag 7649970  T
Q  325 ttttggttcacttgccaaatctctatcattaggttctaattataataaaaggaaattggaattagcaattagaaattggcatgcaatagaatgagaattg 424  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7649969 ttttggttcacttgtcaaatctctatcattaggttctaattataataaaaggaaattggaattagcaattagaaattggcatgcaatagaatgataattg 7649870  T
Q  425 aaaccccgattgattttccctttttgttgttgtgttcttacatgtgtgaatttgatcaactagcttaaaatctttaagtgagattaacgagtattgtgat 524  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  7649869 aaaccccgattgatttttcctttttgttgttgtgttcttacatgtgtgaatttgatcaactagcttaaaatctttacgtgcgattaacgggtattgtgat 7649770  T
Q  525 tagtgtgagaaaattagattttaatgaaactcac 558  Q
    ||||||||||||||||||||||||||||||||||    
T  7649769 tagtgtgagaaaattagattttaatgaaactcac 7649736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 24 - 353
Target Start/End: Complemental strand, 14616756 - 14616428
Alignment:
Q  24 ataggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgt 123  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||     
T  14616756 ataggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgattgaattaggagtgaaaattaccataggagaacttcgg 14616657  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctagg 223  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14616656 aggattcaaaggtcttaaccatacttctctctaatattcttaaaatcaacttttattgttttatttacgtttatgttacaaaacaactcaacttcctagg 14616557  T
Q  224 gcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgata 323  Q
    | |||||||||||||  ||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  14616556 gtaatcaatataaattcatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgata 14616458  T
Q  324 gttttggttcacttgccaaatctctatcat 353  Q
    ||||||||||||||||||||||||||||||    
T  14616457 gttttggttcacttgccaaatctctatcat 14616428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 34405767 - 34406094
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  34405767 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 34405866  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||  |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34405867 ggatttgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacacaacaactcaactgcctaggg 34405966  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||| ||| ||||||| ||  |||||||||||||||    
T  34405967 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtccttgtggatacgaactttattactacttcgatag 34406065  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  34406066 cttttggtacacttgccaaatatctatca 34406094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 22159663 - 22159867
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||| | ||||||||| ||||||||| |    
T  22159663 taggtcaagagattgggtagagttactttgttaatctatcgttgaactagatagtcattgattgaactaggagtgcgatttaccataggagaacttcgga 22159762  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
    ||||||||||||||||| |||| || ||| |||||||||||||||||| |||||||||||||||||||||||  ||| ||||  |||  |||||||||||    
T  22159763 ggattcaaaggtcttaaccatatttctctctaatattcttaaaaccaatttttattgttttatttacgtttactttataaaaaccaatccaactgcctag 22159862  T
Q  223 ggcaa 227  Q
    |||||    
T  22159863 ggcaa 22159867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 349
Target Start/End: Original strand, 33575013 - 33575331
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattg-aattaggagtgcaaattaccatagaagaacttcgtaggatt 129  Q
    ||||||||||||| |||||||  |||||||  |||| |||||| |||| ||||||||| |||||||||||||||||||||||| ||| ||||| ||||||    
T  33575013 aagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgattgtaattaggagtgcaaattaccataggagagcttcggaggatt 33575112  T
Q  130 caaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcctagggcaa 227  Q
    | |||| ||||| ||||||| || | ||| |||| |||||||| | |||||||||||   |  ||||||||||| ||| ||||||||||||||||||| |    
T  33575113 cgaaggacttaaccatacttctc-tcaattttctaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggc-a 33575210  T
Q  228 tcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-tt 326  Q
     |||||||||| |||||||||||||| ||        ||||| | ||||| ||||  || ||||||||||| |||||||| |||| ||||||||| |  |    
T  33575211 ccaatataaatttatacatcctttttaat-aataaaattgctaaatagaagttaaatacagtcctcgtgaaaacgaattt-tttattacttcgattgaat 33575308  T
Q  327 ttggttcacttgccaaatctcta 349  Q
    |||||||||||||||||| ||||    
T  33575309 ttggttcacttgccaaatttcta 33575331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 15532528 - 15532200
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattg-aattaggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| ||||||| | | ||||||||||||||||||| || ||| |||       
T  15532528 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccacaggagagctttag 15532429  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattctt-aaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||||||| || | ||| ||||| |||||||| | |||||||||||   |  ||||||||||| ||| ||||||||||||||    
T  15532428 aggattcgaaggacttaaccatacttctc-tcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcct 15532330  T
Q  221 agggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcg 320  Q
    ||||| | |||||||||| |||||||||||||| ||        ||||| ||||||| ||||  || ||||||||| | |||||||| |||| |||||||    
T  15532329 agggc-accaatataaatttatacatcctttttaat-aatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaattt-tttattacttcg 15532233  T
Q  321 atag-ttttggttcacttgccaaatctctatca 352  Q
    || |  |||||||||| |||||||| |||||||    
T  15532232 atcgaatttggttcacatgccaaatatctatca 15532200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 350
Target Start/End: Complemental strand, 15542710 - 15542384
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattg-aattaggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| ||||||| | | ||||||||||||||||||| || ||| |||       
T  15542710 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccacaggagagctttag 15542611  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattctt-aaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||||||| || | ||| ||||| |||||||| | |||||||||||   |  ||||||||||| ||| ||||||||||||||    
T  15542610 aggattcgaaggacttaaccatacttctc-tcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcct 15542512  T
Q  221 agggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcg 320  Q
    ||||| | |||||||||| |||||||||||||| ||        ||| | ||||||| ||||  || ||||||||| | |||||||| |||| |||||||    
T  15542511 agggc-accaatataaatttatacatcctttttaat-aatgaaattgttaagtagaagttaaatacagtcctcgtggaaacgaattt-tttattacttcg 15542415  T
Q  321 atag-ttttggttcacttgccaaatctctat 350  Q
    || |  ||||||||||||||||||| |||||    
T  15542414 atcgaatttggttcacttgccaaatatctat 15542384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 255
Target Start/End: Complemental strand, 26712669 - 26712437
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| ||||||||||||||||||||||||||| ||||| ||| | ||| |    
T  26712669 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtgcaaattatcataggagagcgtcgga 26712570  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-ctttta-ttgttttatttacgtttatgttacaaaa-caactcaactgccta 221  Q
    |||||| || | ||||| ||| ||| |||   || ||| ||||||||| |||||| |  ||||| ||  ||||||||||||||| ||||||||||| |||    
T  26712569 ggattcgaaagacttaaccattcttctctcagattttc-taaaaccaatcttttactatttttaattttgtttatgttacaaaatcaactcaactgtcta 26712471  T
Q  222 gggcaatcaatataaa-tctatacatcctttttga 255  Q
    ||||| | |||||||| | || |||||||||||||    
T  26712470 gggcact-aatataaattttacacatcctttttga 26712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 255
Target Start/End: Complemental strand, 26982407 - 26982175
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| ||||||||||||||||||||||||||| ||||| ||| | ||| |    
T  26982407 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtgcaaattatcataggagagcgtcgga 26982308  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-ctttta-ttgttttatttacgtttatgttacaaaa-caactcaactgccta 221  Q
    |||||| || | ||||| ||| ||| |||   || ||| ||||||||| |||||| |  ||||| ||  ||||||||||||||| ||||||||||| |||    
T  26982307 ggattcgaaagacttaaccattcttctctcagattttc-taaaaccaatcttttactatttttaattttgtttatgttacaaaatcaactcaactgtcta 26982209  T
Q  222 gggcaatcaatataaa-tctatacatcctttttga 255  Q
    ||||| | |||||||| | || |||||||||||||    
T  26982208 gggcact-aatataaattttacacatcctttttga 26982175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 21680634 - 21680721
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| |||| || ||  |||||||||||||||||||||| |||||||||||| |||||||    
T  21680634 ttgctaagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagttttggtacacttgccaaatatctatca 21680721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 33921372 - 33921459
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||| ||||||||||||||| ||||||| ||  |||||||||||||||||||||| |||||||| ||| |||||||    
T  33921372 ttgctaagtagaaattcacaacggtcctcgtggatacgaactttattactacttcgatagttttggtacacttgccgaatatctatca 33921459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 2499850 - 2499762
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgata-gttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||||||||||||||  ||||||| |||||||||||| |||||||    
T  2499850 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatatcttttggtacacttgccaaatatctatca 2499762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 1810272 - 1810198
Alignment:
Q  271 agtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaat 344  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||| |||||| |||||    
T  1810272 agtagaaattaacaacggtcctcgtgaatacgaactttattactacttcgatagcttttggtacacttgtcaaat 1810198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 11989133 - 11988991
Alignment:
Q  86 ttgaattaggagtgcaaattacc--atagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgtt 183  Q
    ||||| |||||||||||||||||  |||| ||||||| | ||||||| |||||||||| | ||||| ||| |||| |||| ||| | | ||||||| |||    
T  11989133 ttgaactaggagtgcaaattaccatataggagaactttggaggattcgaaggtcttaaccttacttctctctaattttctaaaatcaatcttttatcgtt 11989034  T
Q  184 ttatttacgtttatgttacaaaa--caactcaactgcctaggg 224  Q
    ||   |  |||||||||||||||  ||||||||||||||||||    
T  11989033 tttaatctgtttatgttacaaaaatcaactcaactgcctaggg 11988991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 36330999 - 36331075
Alignment:
Q  269 tgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatc 345  Q
    |||||||||||||||||||||||||||| || | |||||  ||| ||||||||||| || ||| |||||| ||||||    
T  36330999 tgagtagaaattaacaacggtcctcgtggatgcaaattttattattacttcgatagattaggtacacttgtcaaatc 36331075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 23993385 - 23993320
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaa 90  Q
    ||||| ||||||||||||| || |  ||||||||| |||||||||||||| || ||||||||||||    
T  23993385 taggtcaagagattgggtagaactgttttgttaatatatcgttaaactaggtagacattgattgaa 23993320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 9691083 - 9691125
Alignment:
Q  310 ttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||| |||||||| |||||||||||| |||||||    
T  9691083 ttactacttcgatggttttggtacacttgccaaatttctatca 9691125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 25185699 - 25185741
Alignment:
Q  310 ttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    |||||||||||||||||||||| |||||| ||||| |||||||    
T  25185699 ttactacttcgatagttttggtacacttgtcaaatatctatca 25185741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 19686465 - 19686517
Alignment:
Q  288 gtcctcgtgaatacgaatttattt-actacttcgatagttttggttcacttgc 339  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| || |||||||    
T  19686465 gtcctcgtggatacgaacttattttactacttcgatagttttagtacacttgc 19686517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 24783327 - 24783654
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||  ||||||||| |    
T  24783327 taggtcaagagattgggtataattactttgttaatctctcgttaaactagataatcattgattgaattaggaatgaaaattaccatatgagaacttcgga 24783426  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||     
T  24783427 ggattcaaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattgttttatttaagtttatgttacaaaacaactcaactgccttgga 24783526  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  24783527 caatcaatataaatttatacatcctttttgataaaagaaattgccgagtagaaattaacaacggtcctcgtggatacaaatttatttattacttcgatag 24783626  T
Q  325 ttttggttcacttgccaaatctctatca 352  Q
    |||||||||||||| |||||||||||||    
T  24783627 ttttggttcacttgtcaaatctctatca 24783654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 6967066 - 6967393
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  6967066 taggttaagagattgggtagaattactttgttaatctatcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 6967165  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6967166 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 6967265  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  6967266 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 6967364  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  6967365 cttttggtacacttgccaaatatctatca 6967393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 17866680 - 17866353
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  17866680 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 17866581  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| ||||||| || ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17866580 ggattcgaaggtctaaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacagctcaactgcctaggg 17866481  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  17866480 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 17866382  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  17866381 cttttggtacacttgccaaatatctatca 17866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 17863421 - 17863202
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  17863421 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 17863322  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17863321 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacagctcaactgcctaggg 17863222  T
Q  225 caatcaatataaatctatac 244  Q
    |||||||||||||| |||||    
T  17863221 caatcaatataaatttatac 17863202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 36843264 - 36842937
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||| ||||||||||| ||||| |||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||| |    
T  36843264 taggtcaagagattgggtagagttaatttgttaatctgtcgttgaactagataatcattgattgaagtaggagtgcgaattaccataggagaacttcgga 36843165  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
    |||||| |||||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||  ||| ||||  |||  |||||||||||    
T  36843164 ggattcgaaggtcttaaccatacttctctctaatattcataaaaccaacttttattgttttatttacgtttactttataaaaaccaatccaactgcctag 36843065  T
Q  223 ggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgat 322  Q
    ||||| | ||  || |  |||||||| ||| |||        |||||||||||||||||||||||||||| ||| || |||  ||||||| |||||||||    
T  36843064 ggcaaaccattgaatttaatacatcc-tttcgat-aacgaaattgctgagtagaaattaacaacggtccttgtggattcgatcttatttattacttcgat 36842967  T
Q  323 agttttggttcacttgccaaatctctatca 352  Q
    | ||||||||||||||||||||||||||||    
T  36842966 aattttggttcacttgccaaatctctatca 36842937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 63 - 352
Target Start/End: Original strand, 9765758 - 9766046
Alignment:
Q  63 tcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattc 162  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| ||||||| ||| ||||||||    
T  9765758 tcgtgaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattc 9765857  T
Q  163 ttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggcaatcaatataaatct-atacatcctttttgatnnn 259  Q
    |||||||||||||||||| ||||||||| |||||  ||| ||||  |||  |||||||||||||||| |   | |||| | |||||||||||| |||       
T  9765858 ttaaaaccaacttttattattttatttatgtttactttataaaaaccaatccaactgcctagggcaacc---agaaatttaatacatccttttcgataaa 9765954  T
Q  260 nnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
          ||||||||||||||||||||||| |||  || || |||  ||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  9765955 gaaaa-tgctgagtagaaattaacaacggcccttatggattcgatcttatttattacttcgatagttttggttaacttgccaaatatctatca 9766046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 294789 - 294907
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  294789 aagagattgggtataattactttgttaatctgtcgttgaattagataatcattgattgcattaggagtgcaaattaccataggagaacttcggaggattc 294888  T
Q  131 aaaggtcttaatcatactt 149  Q
     || | ||||| |||||||    
T  294889 gaaagacttaaccatactt 294907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 46846639 - 46846479
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||| |  |||||||| |||| |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |    
T  46846639 taggtcaagagattgggtagaattattaggttaatctgtcgtgaaactaaataatcattgattgaactaggagtgcaaattaccatagaagaacttcgga 46846540  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgtttt 185  Q
    |||||| |||| ||||| ||||||| || | ||| |||| |||||||| |||||||||||||    
T  46846539 ggattcgaaggacttaaccatacttctc-tcaattttctaaaaaccaatcttttattgtttt 46846479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 11279410 - 11279639
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| |||| |||||| |||||||||||||||||| || ||||||||| |    
T  11279410 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcatttattgaactaggagtgcaaattaccagaggagaacttcgaa 11279509  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttatt-gttttatttacgtttatgttacaaaa-caactcaactgcctag 222  Q
     ||||| |||| ||||| ||||||| || | ||| |||| ||||||||  |||||| |||||   |  ||||||||||||||| ||||||||||||||||    
T  11279510 agattcgaaggacttaaccatacttctc-tcaatcttctaaaaaccaatctttattcgtttttaatcagtttatgttacaaaatcaactcaactgcctag 11279608  T
Q  223 ggcaatcaatataaa-tctatacatccttttt 253  Q
    ||| | ||||||||| | ||||||||||||||    
T  11279609 ggc-accaatataaattttatacatccttttt 11279639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 31 - 226
Target Start/End: Complemental strand, 23313581 - 23313384
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    ||||||||||||| | ||||  ||||||| | | || || |||||||| ||||| ||||||||| ||||||||||||||||| ||||||||| |||||||    
T  23313581 aagagattgggtagagttacagtgttaatatgttgtgaacctagataatcattgtttgaattagtagtgcaaattaccataggagaacttcggaggattc 23313482  T
Q  131 aaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    ||||||||||| ||||||| ||| |||| |||| |||||||  |||||||||||||   | ||||||||||||||||  ||| |||||| |||||||||    
T  23313481 aaaggtcttaaccatacttctctctaattttct-aaaaccattcttttattgtttttaattcgtttatgttacaaaaatcaattcaactacctagggca 23313384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 36222635 - 36222406
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||||||| |||| |||||||  |||||| | | || |||||| |||| ||||||||||| |||||||| |||||||||||| ||||||||| |    
T  36222635 taggtcaagagattaggtaaaattactaagttaatttgtagtgaaactaaataatcattgattgaactaggagtgaaaattaccataggagaacttcgga 36222536  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 222  Q
    |||||| |||| ||||| ||||||| || | ||| |||| |||||||| ||||  |||||||   |  |||||||||| |||| ||||||||||||||||    
T  36222535 ggattcgaaggacttaaccatacttctc-tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttagaaaatcaactcaactgcctag 36222437  T
Q  223 ggcaatcaatataaa-tctatacatccttttt 253  Q
    ||| | ||||||||| | ||||||||||||||    
T  36222436 ggc-accaatataaattttatacatccttttt 36222406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 3862225 - 3862029
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||  ||||||||||||||        ||||| ||||||||| |    
T  3862225 taggtcaagagattgggtagaattactttgttaatctgtcgttgaactagataatcatttcttgaattaggagtg--------cataggagaacttcgaa 3862134  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaa---caactcaactgcct 220  Q
    |||||| |||||||||||||||||| ||| |||| ||  ||||||||| |||||||||||||   |  |||||||||||||||   ||| | ||||||||    
T  3862133 ggattcgaaggtcttaatcatacttctctctaat-tttataaaaccaatcttttattgtttttaatcagtttatgttacaaaaaatcaattgaactgcct 3862035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 31 - 253
Target Start/End: Complemental strand, 23759930 - 23759706
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgtaggatt 129  Q
    ||||||||||||| |||||||  |||||||  |||| |||||| |||| ||||||| | ||| |||||||||||||||||||| ||| ||| | ||||||    
T  23759930 aagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttggaggatt 23759831  T
Q  130 caaaggtcttaatcatacttatctttaatattctt-aaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcctagggca 226  Q
    | |||| ||||| ||||||| || |  || ||||| |||||||| | |||||||||||   |  ||||||||||| ||| |||||||||||||||||||     
T  23759830 cgaaggacttaaccatacttctc-tcgattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggc- 23759733  T
Q  227 atcaatataaatctatacatccttttt 253  Q
    | |||||||||| ||||||||||||||    
T  23759732 accaatataaatttatacatccttttt 23759706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 23107917 - 23108106
Alignment:
Q  36 attgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaagg 135  Q
    |||||||| | |||||  |||||||| | || |||||| |||| ||||| ||||| ||||||||||||||||||||| ||| ||||| | ||||| ||||    
T  23107917 attgggtagagttactaagttaatctgttgtgaaactaaataatcattgtttgaactaggagtgcaaattaccataggagagcttcggatgattcgaagg 23108016  T
Q  136 tcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaa--aacaactcaactgcctagg 223  Q
    |||||| || | || ||| |||| ||| ||||||||| |||||||||||||   | ||||||||||||||  | ||||||||||| |||||    
T  23108017 tcttaaccacatttctctctaattttc-taaaaccaatcttttattgtttttaattcgtttatgttacaaacatcaactcaactgtctagg 23108106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 353
Target Start/End: Complemental strand, 17857968 - 17857879
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatcat 353  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||  |||||| |||||||| ||||||| |||||||||||| ||||||||    
T  17857968 ttgccgagtagaaattaacaacggtcctcgtggatacgaactttattactatttcgatagcttttggtacacttgccaaatatctatcat 17857879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 226
Target Start/End: Original strand, 33312913 - 33313116
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| || |||||||||| |||||||  ||||||   |||| |||||| |||| |||||||||||||||||  |||||||||||||| ||| ||||  |    
T  33312913 taggtcaaaagattgggtagaattactaagttaattcgtcgtgaaactaaataatcattgattgaattaggaaagcaaattaccataggagagcttcaga 33313012  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttatt-gttttatttacgtttatgttacaaaa-caactcaactgccta 221  Q
    |||||| |||| ||||| |||  || |||   || ||| ||||||||| | ||||||  ||||| || |||||||||||||||| |||||||||||||||    
T  33313013 ggattcgaaggacttaaccatttttctctcagattttc-taaaaccaatcctttattatttttaattccgtttatgttacaaaatcaactcaactgccta 33313111  T
Q  222 gggca 226  Q
    |||||    
T  33313112 gggca 33313116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 38431669 - 38431757
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| ||||||||||||||||||||||| || ||||||| ||  ||||||||||||||| ||||||| ||||| |||||| |||||||    
T  38431669 ttgctaagtagaaattaacaacggtcctcatggatacgaactttattactacttcgatagcttttggtacactttccaaatatctatca 38431757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 3541011 - 3540932
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaat 344  Q
    ||||| ||||||| || ||||||||||||||| ||||||| ||  ||||||||| |||||||||||| ||||||||||||    
T  3541011 ttgctaagtagaagttcacaacggtcctcgtggatacgaactttattactactttgatagttttggtacacttgccaaat 3540932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 6964563 - 6964643
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaat 344  Q
    ||||| |||||||||||||||||| ||||||| ||||||| ||  ||||||||||||||| ||||||| ||||| ||||||    
T  6964563 ttgctaagtagaaattaacaacggccctcgtggatacgaacttcattactacttcgatagtttttggtacacttaccaaat 6964643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 28577761 - 28577687
Alignment:
Q  269 tgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaa 343  Q
    ||||||||| |||||||||||||||||  ||| ||||||  ||| | |||||||||||||||| |||||||||||    
T  28577761 tgagtagaagttaacaacggtcctcgtagatatgaatttgattattgcttcgatagttttggtacacttgccaaa 28577687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 223; Significance: 1e-122; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 13495906 - 13496232
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  13495906 taggtcaagagattggatataattactttcttaatctgtcgttaaagtagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 13496005  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  13496006 ggattcaaaggtcttaaccatacttctctctaatattcttaaaatcaacttttattgttttatttacgtttatgttacaaaacaattcaactgcctagga 13496105  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  13496106 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag 13496204  T
Q  325 ttttggttcacttgccaaatctctatca 352  Q
    |||||||||||||| |||||||||||||    
T  13496205 ttttggttcacttgtcaaatctctatca 13496232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 13493181 - 13493508
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  13493181 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 13493280  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13493281 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 13493380  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  13493381 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 13493479  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  13493480 cttttggtacacttgccaaatatctatca 13493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 10764838 - 10765165
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||  |    
T  10764838 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaagttaccataggagaacttcaga 10764937  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10764938 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 10765037  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  10765038 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 10765136  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  10765137 cttttggtacacttgccaaatatctatca 10765165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 32506181 - 32505857
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |    
T  32506181 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcgga 32506082  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| || |||| ||| |||||||||||||||||||||||||||||||   | ||||||||||| ||||     |||||||||   |    
T  32506081 ggattcgaaggtcttaaccacacttctctataatattcttaaaaccaacttttattgtttttaattcgtttatgttagaaaa-----caactgcctcacg 32505987  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaa----caacggtcctcgtgaatacgaatttatttactacttcg 320  Q
    | |||||||||||| |||||||||||||||||        |||  |||||||| ||||    ||| |||||||||| ||||||  ||||||| |||||||    
T  32505986 c-atcaatataaatttatacatcctttttgat-aaagaaattgtcgagtagaagttaacatgcaatggtcctcgtggatacgatcttatttattacttcg 32505889  T
Q  321 atagttttggttcacttgccaaatctctatca 352  Q
    |||||||||||||||||||||||| |||||||    
T  32505888 atagttttggttcacttgccaaatatctatca 32505857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 39546161 - 39546486
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||| |    
T  39546161 taggtcaagagattgggtagagttactttgttaatctgtcgtgaaactagataatcattgcttgaattaggagtgcaaattaccatatgagaacttcgga 39546260  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
    |||||| |||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||| |||||||||  |||  |||||||||||    
T  39546261 ggattcgaaggtcttaaccatacttctctctaatatttttaaaaccaacttttattgttttatttgcgtttacgttacaaaaaccaatccaactgcctag 39546360  T
Q  223 ggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgat 322  Q
    ||||| ||||  || |  |||||||| ||| |||        |||||||||| || ||||||| |||||||||| ||||||  ||||||| |||||| ||    
T  39546361 ggcaa-caattgaatttaatacatcc-tttcgat-aatgaaattgctgagtaaaagttaacaatggtcctcgtg-atacgatcttatttattacttcaat 39546456  T
Q  323 agttttggttcacttgccaaatctctatca 352  Q
    | ||||||||||||||||||||||||||||    
T  39546457 aattttggttcacttgccaaatctctatca 39546486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 34066264 - 34066466
Alignment:
Q  26 aggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtag 125  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| ||    
T  34066264 aggtcaagagattgggtagaattactttgttaatctatcgttaaactagataatcattgattgaattaggagtgcaaattatcataggagaacttcggag 34066363  T
Q  126 gattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
    ||||| |||||||||| ||||||| ||| |||| ||| ||||||||| |||||||||||||   | ||||||||||||||||  ||| ||||||||||||    
T  34066364 gattcgaaggtcttaaccatacttctctctaattttc-taaaaccaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctag 34066462  T
Q  223 ggca 226  Q
    ||||    
T  34066463 ggca 34066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 27282434 - 27282230
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||  ||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |    
T  27282434 taggtcaagagattgggtagaattactttgttaatcggtcgttgaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcgga 27282335  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
    | |||| || ||||||| ||||||| ||| |||||||| ||||||||| ||| |||||||||||||| ||||  ||| ||||  |||  |||||||||||    
T  27282334 gaattcgaaagtcttaaccatacttctctctaatattcataaaaccaattttaattgttttatttacatttactttataaaaaccaatccaactgcctag 27282235  T
Q  223 ggcaa 227  Q
    |||||    
T  27282234 ggcaa 27282230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 352
Target Start/End: Complemental strand, 16190499 - 16190179
Alignment:
Q  31 aagagattgggtata-attactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggatt 129  Q
    ||||||||||||||| |||| ||||||||| | |||||||||||||||| ||||| |||||||| |||||||||||| ||||| ||||||||| ||||||    
T  16190499 aagagattgggtatatattattttgttaatttgtcgttaaactagataatcattgcttgaattaagagtgcaaattatcataggagaacttcggaggatt 16190400  T
Q  130 caaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaa--aacaactcaactgcctagggcaa 227  Q
    | |||||||||| ||||||| |||||||| ||| |||||||||  |||||||||||   | ||||||||||||||  | |||||||| | |||||||||     
T  16190399 cgaaggtcttaaccatacttctctttaattttc-taaaaccaatctttattgtttttaattcgtttatgttacaaacatcaactcaatttcctagggca- 16190302  T
Q  228 tcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttt 327  Q
     | ||  || |  ||||||||||| |  |        |||  || || ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  16190301 -ccattgaatttaatacatcctttat-tttaacgtttttgtcgaataaaaattaacaacagtcctcgtggatacgaatttatttattacttcgatagttt 16190204  T
Q  328 tggttcacttgccaaatctctatca 352  Q
    || |||||||| |||||||| ||||    
T  16190203 tgattcacttgtcaaatctccatca 16190179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 1936551 - 1936691
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    |||||||| |||| | ||||||||||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  1936551 aagagatttggtagagttactttgttaatctttcgtgaagctagataatcattgattgaactaggagtgcaaattaccataggagaacttcggaggattc 1936650  T
Q  131 aaaggtcttaatcatacttatctttaatattcttaaaaccaa 172  Q
     |||||||||| ||||||| ||| |||| ||| |||||||||    
T  1936651 gaaggtcttaaccatacttctctctaattttc-taaaaccaa 1936691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 15297251 - 15297383
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||| || |||||||||||| || |||||||||||| | ||||||| ||| |    
T  15297251 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagatgaatattgattgaatt-ggggtgcaaattaccgtggaagaacatcgga 15297349  T
Q  125 ggattcaaaggtcttaatcatacttatctttaat 158  Q
    |||||| ||||||||||||||| || ||||||||    
T  15297350 ggattcgaaggtcttaatcatatttctctttaat 15297383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 22456818 - 22456705
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||| ||| |||||||||||||  ||||||||||||| |||| || |||||| |||||| ||||||||| |    
T  22456818 taggtcaagagattgggtagaattactttgttagtctgtcgttaaactagacgaacattgattgaa-taggggtacaaatttccataggagaacttcgga 22456720  T
Q  125 ggattcaaaggtctt 139  Q
    |||||| ||||||||    
T  22456719 ggattcgaaggtctt 22456705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 49147825 - 49147930
Alignment:
Q  33 gagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattcaa 132  Q
    ||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||| |||| || |||||| |||||| ||||||||| ||||||| |    
T  49147825 gagattgggtagaattactttgttaatctgtcgttaaactagacgaacattgattgaa-taggggtacaaatttccataggagaacttcggaggattcga 49147923  T
Q  133 aggtctt 139  Q
    |||||||    
T  49147924 aggtctt 49147930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 21153174 - 21153295
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||| ||| ||||||| ||||||||| ||||||||||| || ||||||||||||||| || ||||||||||||||  |||| | ||| |    
T  21153174 taggtcaagagattgagtagaattactgtgttaatctgtcgttaaactaaatgaacattgattgaattgggggtgcaaattaccatttaagagcatcgga 21153273  T
Q  125 ggattcaaaggtcttaatcata 146  Q
    |||||| |||||||||| ||||    
T  21153274 ggattcgaaggtcttaaccata 21153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 34552525 - 34552438
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||| |||||| ||||| |||||||    
T  34552525 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagttttggtacacttgtcaaatatctatca 34552438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 18392669 - 18392747
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaa 342  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||||||||||||||| ||||||| ||||||||||    
T  18392669 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaa 18392747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 15297492 - 15297559
Alignment:
Q  272 gtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgc 339  Q
    |||||| ||||||||||||| |||| ||| ||||| |||||||||||||||||||||||| |||||||    
T  15297492 gtagaagttaacaacggtccccgtggatatgaattcatttactacttcgatagttttggtacacttgc 15297559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 460
Target Start/End: Complemental strand, 48505937 - 48505874
Alignment:
Q  397 aaattggcatgcaatagaatgagaattgaaaccccgattgattttccctttttgttgttgtgtt 460  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  48505937 aaattgacatgcaatagaatgagaattgaaaccctaattgattttcccattttgtttttgtgtt 48505874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 8435284 - 8435357
Alignment:
Q  155 taatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    |||| |||| |||||||||||||||||||||  ||| |||||||||||||||  ||||||||||||||||||||    
T  8435284 taattttctaaaaaccaacttttattgtttttattatgtttatgttacaaaaatcaactcaactgcctagggca 8435357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 49716647 - 49716735
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||| ||||||||||| ||||||| |||||| ||| | |||||||    
T  49716647 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattattacttcgatagtttttggtacacttgtcaattatctatca 49716735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 49720129 - 49720192
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagtttt 328  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||| |||||||||||||||    
T  49720129 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattattacttcgatagtttt 49720192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 344
Target Start/End: Original strand, 6206164 - 6206237
Alignment:
Q  271 agtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaat 344  Q
    ||||||||||||||||||| |||||| ||||||| ||  |||||||||||||| |||| || ||||||| ||||    
T  6206164 agtagaaattaacaacggttctcgtggatacgaactttattactacttcgataattttagtacacttgctaaat 6206237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 22453462 - 22453415
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaact 72  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  22453462 taggtcaagagattgggtagaattactttgttaatctgtcgttaaact 22453415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 23990415 - 23990362
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataa 78  Q
    ||||| ||| ||||||||| ||||||||||||||||| ||||| ||||||||||    
T  23990415 taggtcaagtgattgggtagaattactttgttaatctgtcgttgaactagataa 23990362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 50196803 - 50196723
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaat 344  Q
    ||||| ||| || ||||||||||||||||||| |||| |||||  ||| |||||| |||| ||||||| ||||||||||||    
T  50196803 ttgctaagttgagattaacaacggtcctcgtggatacaaattttattattacttcaatagtttttggtacacttgccaaat 50196723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 48505851 - 48505811
Alignment:
Q  420 aattgaaaccccgattgattttccctttttgttgttgtgtt 460  Q
    |||||||||||  |||||||||||||||||||| |||||||    
T  48505851 aattgaaaccctaattgattttccctttttgtttttgtgtt 48505811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-113; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 14790537 - 14790864
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  14790537 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 14790636  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14790637 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 14790736  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  14790737 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 14790835  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  14790836 cttttggtacacttgccaaatatctatca 14790864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 14795565 - 14795892
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  14795565 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 14795664  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14795665 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 14795764  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||   |||||| ||  |||||||||||||||    
T  14795765 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtaggtacgaactttattactacttcgatag 14795863  T
Q  325 -ttttggttcacttgccaaatctctatca 352  Q
     ||||||| |||||||||||| |||||||    
T  14795864 cttttggtacacttgccaaatatctatca 14795892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 25 - 356
Target Start/End: Original strand, 1838393 - 1838724
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||||||||||||||| ||||| ||||| |||| | ||||||||| ||||||||| |||||| |||| ||||||||| |    
T  1838393 taggtcaagagattgggtagagttactttgttaatctgtcgttgaactaaataatcgttgattgaactaggagtgcgaattac-ataggagaacttcgga 1838491  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
    |||||| |||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||| |||||||||  ||| ||||  |||  |||||| ||||    
T  1838492 ggattcgaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattctttta-ttacgtttactttataaaaaccaatccaactgtctag 1838590  T
Q  223 g-gcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    |   ||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  1838591 gaaaaatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtccttgtggatacgaatttatttattacttcga 1838689  T
Q  322 tagttttggttcacttgccaaatctctatcattag 356  Q
    || ||||||||||||||||||||||||||||||||    
T  1838690 taattttggttcacttgccaaatctctatcattag 1838724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 32704575 - 32704398
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |||||||    
T  32704575 aagagattgggtagaattactctgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcagaggattc 32704476  T
Q  131 aaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaaca 208  Q
     |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32704475 gaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaaca 32704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 25 - 351
Target Start/End: Complemental strand, 19664991 - 19664667
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||| |||||||| | ||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  19664991 taggtcaagatattgggtagagttactttgttaatctgtcgtgaa-ctagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 19664893  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaa--aacaactcaactgcctag 222  Q
    |||||| |||||||||| ||||| | ||| |||| |||||||| | |||||||||||||||   | ||||||| ||||||  | |||  |||||||||||    
T  19664892 ggattcgaaggtcttaaccatacatctctctaattttcttaaaccaaacttttattgtttttaatccgtttattttacaaataccaatccaactgcctag 19664793  T
Q  223 ggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgat 322  Q
    ||||| |  |  || |  ||||||||||||||||        ||| ||||||||||| |||||||||||||||| |||| |||||||||| |||||||||    
T  19664792 ggcaacc--ttgaatttaatacatcctttttgat-aaagaaattgttgagtagaaataaacaacggtcctcgtggatacaaatttatttattacttcgat 19664696  T
Q  323 agttttggttcacttgccaaatctctatc 351  Q
    |||||||||||||||||||||||| ||||    
T  19664695 agttttggttcacttgccaaatctttatc 19664667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 20527490 - 20527285
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||| ||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  20527490 taggtcaagagattgggtaaagttaatttgttaatctgtcgtgaagttagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 20527391  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattg-ttttatttacgtttatgttacaaaa--caactcaactgccta 221  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||  ||| |||||||||||    
T  20527390 ggattcgaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttttatttatgtttacgttacaaaaatcaattcaactgccta 20527291  T
Q  222 gggcaa 227  Q
    ||||||    
T  20527290 gggcaa 20527285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 15534975 - 15535300
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||||||||| || | ||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||| | ||||||| |    
T  15534975 taggtcaagagattggttagagttactttgttaatctgtcgttgaactagataatcattgattgaattaggaatgcaaattaccataggaaaacttcgga 15535074  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa-caactcaactgcctagg 223  Q
    |||||  |||||||||| ||||| |  ||||||| || | ||| | |||||||||||||||   |   ||| | |||||||| |||||||||||||||||    
T  15535075 ggatttgaaggtcttaaccatacatcactttaattttgtaaaaccaaacttttattgtttttaatctatttgttttacaaaatcaactcaactgcctagg 15535174  T
Q  224 gcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgata 323  Q
    |||| |  |  || |  ||||||||||||| ||        | ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  15535175 gcaacc--ttgaatttaatacatccttttttat-aaagaaatggctgagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcgata 15535271  T
Q  324 gttttggttcacttgccaaatctctatca 352  Q
     ||||||||||| ||| ||||||| ||||    
T  15535272 attttggttcacatgcgaaatctccatca 15535300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 81 - 353
Target Start/End: Original strand, 27649077 - 27649347
Alignment:
Q  81 attgattgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttatt 180  Q
    |||| ||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||  || |||| |||||||||||||||||||||    
T  27649077 attgcttgaattagaagtgcaaattaccataggagaacttcggaggattcgaaggtcttaaccatacttcgctctaattttcttaaaaccaacttttatt 27649176  T
Q  181 gttttatttacgtttatgttacaaaa--caactcaactgcctagggcaatcaatataaatct-atacatcctttttgatnnnnnnnnttgctgagtagaa 277  Q
    |||| || ||||||||||||| ||||  |||  |||||||||||||| | |||   |||| | || ||||| ||| ||         ||||||||||| |    
T  27649177 gtttcatctacgtttatgttataaaaaccaatccaactgcctagggcgaccaa---aaatttaatgcatcc-tttcga-gaaagaaattgctgagtagga 27649271  T
Q  278 attaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatcat 353  Q
    ||||||||||||||||||| || |||  ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  27649272 attaacaacggtcctcgtggattcgatcttatttattacttcgatagttttagttcacttgccaaatctctatcat 27649347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 16883594 - 16883795
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||||||||||||   ||| | ||||||||| |||| ||  ||||||| ||||| ||||||||| ||||||||||||||||| ||||||||| |    
T  16883594 taggtcaagagattgggtagggttattgtgttaatctttcgtgaacatagataatcattgtttgaattagtagtgcaaattaccataggagaacttcgaa 16883693  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaa--caactcaactgccta 221  Q
    |||||| || ||||||| ||||||| ||| |||| ||| ||||||||| |||||||||||||   | ||||||||||||||||  ||| |||||||||||    
T  16883694 ggattcgaatgtcttaaccatacttctctctaattttc-taaaaccaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgccta 16883792  T
Q  222 ggg 224  Q
    |||    
T  16883793 ggg 16883795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 86 - 352
Target Start/End: Original strand, 32427281 - 32427544
Alignment:
Q  86 ttgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgtttt 185  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| || | ||| |||| |||| ||| | |||||| ||||||||    
T  32427281 ttgaattaggagtgcaaattaccataggagaacttcagaggattcaaaggtcttaatcaaacatctctctaattttctaaaaccaaactttcattgtttt 32427380  T
Q  186 atttacgtttatgttacaaaa--caactcaactgcctagggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaac 283  Q
       | ||||||| |||||||   |||  ||||||| |||||||| |  |  || |  ||||||| ||||||||        ||||||||||||| |||||    
T  32427381 taattcgtttattttacaaataccaatccaactgc-tagggcaacc--ttgaatttaatacatcttttttgataaagaaa-ttgctgagtagaa-ttaac 32427475  T
Q  284 aacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||  |||| |||||||||| |||||||||||||||||||||||| |||||| |||||||    
T  32427476 aacggtcctcgtagatacaaatttatttattacttcgatagttttggttcacttaccaaatatctatca 32427544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 12980818 - 12980705
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||| |||| || ||||||  ||||| ||||||||| |    
T  12980818 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagacgaacattgattgaa-taggggtacaaattttcataggagaacttcgga 12980720  T
Q  125 ggattcaaaggtctt 139  Q
    |||||| ||||||||    
T  12980719 ggattcgaaggtctt 12980705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 13017517 - 13017287
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| |||||| |||| |||||||   ||| |||||||||||||||||||| ||| ||| |     
T  13017517 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgatcatatttaggagtgcaaattaccataggagagctttgg 13017418  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattct-taaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||||||| || | ||| ||||  |||||||| | |||||||||||   |  ||||||||||| ||| ||||||||||||||    
T  13017417 aggattcgaaggacttaaccatacttctc-tcaattttctgaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcct 13017319  T
Q  221 agggcaatcaatataaatctatacatccttttt 253  Q
    ||||| | |||||||||| ||||||||||||||    
T  13017318 agggc-accaatataaatttatacatccttttt 13017287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 7769715 - 7769594
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| || |||||| ||| ||||||||||||||| | ||||||||||| || |||||||||||||||  | ||||||||||||||| |||| | ||| |    
T  7769715 taggtcaaaagattgagtagaattactttgttaatatgtcgttaaactaaatgaacattgattgaattgagggtgcaaattaccatataagagcatcgga 7769616  T
Q  125 ggattcaaaggtcttaatcata 146  Q
    |||||| |||||||||| ||||    
T  7769615 ggattcgaaggtcttaaccata 7769594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 12983704 - 12983592
Alignment:
Q  26 aggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtag 125  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||| |||| || || |||  ||||| ||||||||| ||    
T  12983704 aggtcaagagattgggtagaattactttgttaatctgtcgttaaactagacgaacattgattgaa-taggggtacagattttcataggagaacttcggag 12983606  T
Q  126 gattcaaaggtctt 139  Q
    ||||| ||||||||    
T  12983605 gattcgaaggtctt 12983592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 30978539 - 30978335
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| |||||| |||| ||||||| | ||| |||||||||||||||||||| ||| ||| |     
T  30978539 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 30978440  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattctt-aaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||||||| || | ||| ||||| |||||||| | |||||||||||   |  ||||||||||| ||| ||||||||||||||    
T  30978439 aggattcgaaggacttaaccatacttctc-tcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcct 30978341  T
Q  221 agggca 226  Q
    ||||||    
T  30978340 agggca 30978335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 22221642 - 22221967
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| | |||| |||| ||||||||| ||| | |||||||||||||||||| ||| |||||     
T  22221642 taggtcaagagattgggtagaattactaagttaatccgtcgtgatactaaataatcattgattgtatttaagagtgcaaattaccataggagagcttcgg 22221741  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattg-ttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||| ||| || | ||| |||| |||||||| | ||||||| ||||| ||| |||||  |||| ||| ||||||||||||||    
T  22221742 aggattcgaaggacttaaccatgcttctc-tcaattttctaaaaaccaattctttattgtttttaatta-gttta--ttactaaatcaactcaactgcct 22221837  T
Q  221 agggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcg 320  Q
    ||||| | |||||  ||| |||||||||||||| ||        ||||| |||||||  |||  |  ||||||||| | ||||||||| |||||||||||    
T  22221838 agggc-accaataataatttatacatcctttttaat-aatgaaattgcttagtagaagctaaatatagtcctcgtggaaacgaattta-ttactacttcg 22221934  T
Q  321 atag-ttttggttcacttgccaaatctctatca 352  Q
    |||| ||||||| |||||||||||| |||||||    
T  22221935 atagcttttggtacacttgccaaatttctatca 22221967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 22247477 - 22247802
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| | |||| |||| ||||||||| ||| | |||||||||||||||||| ||| |||||     
T  22247477 taggtcaagagattgggtagaattactaagttaatccgtcgtgatactaaataatcattgattgtatttaagagtgcaaattaccataggagagcttcgg 22247576  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattg-ttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||| ||| || | ||| |||| |||||||| | ||||||| ||||| ||| |||||  |||| ||| ||||||||||||||    
T  22247577 aggattcgaaggacttaaccatgcttctc-tcaattttctaaaaaccaattctttattgtttttaatta-gttta--ttactaaatcaactcaactgcct 22247672  T
Q  221 agggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcg 320  Q
    ||||| | |||||  ||| |||||||||||||| ||        ||||| |||||||  |||  |  ||||||||| | ||||||||| |||||||||||    
T  22247673 agggc-accaataataatttatacatcctttttaat-aatgaaattgcttagtagaagctaaatatagtcctcgtggaaacgaattta-ttactacttcg 22247769  T
Q  321 atag-ttttggttcacttgccaaatctctatca 352  Q
    |||| ||||||| |||||||||||| |||||||    
T  22247770 atagcttttggtacacttgccaaatttctatca 22247802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 114 - 347
Target Start/End: Original strand, 15540578 - 15540809
Alignment:
Q  114 agaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa-caactc 212  Q
    ||||||||| ||||||| |||||||||| ||||  | |||||||| |||| |||   |||||||||||||||   | | ||||| ||| |||| ||||||    
T  15540578 agaacttcggaggattcgaaggtcttaaccataaatctctttaattttctaaaactaaacttttattgtttttaatccctttattttagaaaatcaactc 15540677  T
Q  213 aactgcctagggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttattta 312  Q
    |||||||||||| || |  |  || |  ||||||||||||||||        ||||||||||||| ||||||| |||||   ||  ||| ||||||||||    
T  15540678 aactgcctagggaaacc--ttgaatttaatacatcctttttgatatagaaa-ttgctgagtagaagttaacaatggtccgattggttacaaatttattta 15540774  T
Q  313 ctacttcgatagttttggttcacttgccaaatctc 347  Q
     ||||||||||||||||||||||||||||||||||    
T  15540775 ttacttcgatagttttggttcacttgccaaatctc 15540809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 11184033 - 11183962
Alignment:
Q  155 taatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctaggg 224  Q
    |||| |||| |||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  11184033 taattttctaaaaaccaacttttattgtttttattacgtttatgttacaaaaatcaactcaactgcctaggg 11183962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 33679025 - 33678939
Alignment:
Q  271 agtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag---ttttggttcacttgccaaatctctatcatt 354  Q
    |||||||||||||||||||||||||| ||| ||| ||   ||||||||||||||   ||||||| |||||||||||| | |||||||    
T  33679025 agtagaaattaacaacggtcctcgtggatatgaactttagtactacttcgatagtttttttggtacacttgccaaatatttatcatt 33678939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 15540529 - 15540579
Alignment:
Q  47 ttactttgttaatctatcgttaaactagataaacattgattgaattaggag 97  Q
    ||||||||||||||| ||||| |||||||||| |||||||| |||||||||    
T  15540529 ttactttgttaatctgtcgttgaactagataatcattgattaaattaggag 15540579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 11411039 - 11411127
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| ||||||||||||||| ||| |||||| ||||||| ||  ||| ||||||||||| ||||||| |||||| ||| | |||||||    
T  11411039 ttgctaagtagaaattaacaatggtactcgtggatacgaactttattattacttcgatagtttttggtacacttgtcaattatctatca 11411127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 32090663 - 32090777
Alignment:
Q  352 attaggttctaattataataaaaggaaattggaattagcaattag-------aaattggcatgcaatagaatgagaattgaaaccccgattgattttccc 444  Q
    |||||||||||||||||  |||||| || | ||||| ||||||||       |||||| ||||||||||||  | |||||||||||  | ||||||||||    
T  32090663 attaggttctaattatagcaaaagggaacttgaatttgcaattaggataaggaaattgacatgcaatagaacaaaaattgaaaccctaactgattttccc 32090762  T
Q  445 tttttgttgttgtgt 459  Q
    ||||||||| |||||    
T  32090763 tttttgttggtgtgt 32090777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 12747086 - 12747173
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    |||| ||||||||||| | ||| ||||| ||| ||||||| ||  ||||||||||||||| ||||||| |||||| ||||| |||||||    
T  12747086 ttgccgagtagaaattga-aacagtccttgtggatacgaactttattactacttcgatagcttttggtacacttgtcaaatatctatca 12747173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 34502636 - 34502688
Alignment:
Q  288 gtcctcgtgaatacgaatttattt-actacttcgatagttttggttcacttgc 339  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| || |||||||    
T  34502636 gtcctcgtggatacgaacttattttactacttcgatagttttagtacacttgc 34502688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 25 - 344
Target Start/End: Complemental strand, 647530 - 647211
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  647530 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 647431  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| ||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  647430 ggattcgaagatcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaaatgcctaggg 647331  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| |||| || ||  |||||||||||||||    
T  647330 caatcaatataaatttatacatcctttttgat-aaagaaattgccgagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatag 647232  T
Q  325 -ttttggttcacttgccaaat 344  Q
     ||||||| ||||||||||||    
T  647231 cttttggtacacttgccaaat 647211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 25 - 344
Target Start/End: Complemental strand, 650802 - 650483
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||  |    
T  650802 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 650703  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaactgcctaggg 224  Q
    |||||| |||||||||| ||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  650702 ggattcgaaggtcttaaccatacttctctctaatattatgaaaaccaacttttattgttttatttacgtttatgttacaaaacaactcaaatgcctaggg 650603  T
Q  225 caatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    |||||||||||||| |||||||||||||||||        |||| ||||||||||||||||||||||||||| |||| || ||  |||||||||||||||    
T  650602 caatcaatataaatttatacatcctttttgat-atagaaattgccgagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatag 650504  T
Q  325 -ttttggttcacttgccaaat 344  Q
     ||||||| ||||||||||||    
T  650503 cttttggtacacttgccaaat 650483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 26063020 - 26062690
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  26063020 taggtcaagagattgggtagagttactttgttaatctgtcgttgaactagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 26062921  T
Q  125 ggattcaaaggtcttaatcatac--ttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaa--aacaactcaactgcct 220  Q
    ||||||||||||||||| |||||   | ||| |||| |||| ||| | |||||||||||||||   | ||||||| ||||||  | |||  ||||| |||    
T  26062920 ggattcaaaggtcttaaccatacatctctctctaattttctaaaaccaaacttttattgtttttaatccgtttattttacaaataccaatccaactacct 26062821  T
Q  221 agggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaac--ggtcctcgtgaatacgaatttatttactactt 318  Q
    ||||||| |  |  || |  ||||||||||||||||        ||| ||||||||| ||||||||  |||||||||| ||||||||||||||| || ||    
T  26062820 agggcaacc--ttgaatttaatacatcctttttgat-aaagaaattgttgagtagaagttaacaacggggtcctcgtggatacgaatttatttattattt 26062724  T
Q  319 cgatagttttggttcacttgccaaatctctatca 352  Q
    |||||||||||||||||||||||||||| |||||    
T  26062723 cgatagttttggttcacttgccaaatctttatca 26062690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 26060506 - 26060622
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | |||||||||||||||||||  || |||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |    
T  26060506 taggtcaagagattgggtagagttactttgttaatctatcgggaagctagataatcattgcttgaattaggagtgcaaattaccataggagaacttcgga 26060605  T
Q  125 ggattcaaaggtcttaa 141  Q
    |||||| ||||||||||    
T  26060606 ggattcgaaggtcttaa 26060622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 25 - 226
Target Start/End: Original strand, 2541803 - 2542005
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||||||||| || ||||||||||||||||| ||||| |||||||||| ||||| ||||| ||||||| ||||||||||||  ||||||||  |    
T  2541803 taggtcaagagattggataaaattactttgttaatctgtcgtttaactagataatcattgcttgaaataggagtacaaattaccataagagaacttcaga 2541902  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaacc-aacttttattgttttatttacgtttatgttaca--aaacaactcaactgccta 221  Q
    |||||| |||||||||| |||||   |||||||| |||  |||||| |  ||||||||||||   | |||||||||||||  ||  ||||||||||||||    
T  2541903 ggattcgaaggtcttaaccatac--ctctttaattttcaaaaaacctatattttattgtttttaatccgtttatgttacaagaataaactcaactgccta 2542000  T
Q  222 gggca 226  Q
    |||||    
T  2542001 gggca 2542005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 15851450 - 15851539
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatcatt 354  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||   || |||||||||||||||||| |||||||||||||| |||||||    
T  15851450 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttactattacttcgatagttttggtacacttgccaaatctttatcatt 15851539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 12171901 - 12172218
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| |||||| |||| ||||||||| ||| ||||||||||||||||||||  || |||||     
T  12171901 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgattgtatttaggagtgcaaattaccataggcgagcttcgg 12172000  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattgttttatttacgtttatgttacaaaa-caactcaactgccta 221  Q
    | ||||| |||| ||||| |||||||            ||  ||||||| | |||||||||||   |  ||||||||||| ||| |||||||||||||||    
T  12172001 aagattccaaggacttaaccatactt------------ctagaaaccaaatctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 12172088  T
Q  222 gggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    |||||  |||||||||| |||||||||||||| ||        ||||| ||||||| ||||  || ||||||||| | ||||  || |||| ||||||||    
T  12172089 gggcac-caatataaatttatacatcctttttaat-aatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgatcttttttattacttcga 12172186  T
Q  322 tag-ttttggttcacttgccaaatctctatca 352  Q
    | |  ||||||||||||||||||| |||||||    
T  12172187 tcgaatttggttcacttgccaaatatctatca 12172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 19929155 - 19929242
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacga-atttatttactacttcgatagtt-ttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| | |||| ||||| ||||||||||||||||| ||||| |||||||||||| |||||||    
T  19929155 ttgctaagtagaaattaacaacggtcctcgtgga-acgatattta-ttactacttcgatagttattggtacacttgccaaatatctatca 19929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 21217418 - 21217350
Alignment:
Q  269 tgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcactt 337  Q
    |||||||||||||| ||||||||||||||||||||||||  ||| ||||| ||||||||| || |||||    
T  21217418 tgagtagaaattaataacggtcctcgtgaatacgaattttattattactttgatagttttagtacactt 21217350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 33400163 - 33400075
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| || |||||||||||||||| |||||| ||||||| ||  ||||||| ||||||| ||||||| |||||||||||| |||||||    
T  33400163 ttgctaagcagaaattaacaacggttctcgtggatacgaactttattactacctcgatagcttttggtacacttgccaaatatctatca 33400075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 11649393 - 11649329
Alignment:
Q  164 taaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    ||||||||||||||||||||||  || ||||||| ||||||||  ||||||||||||||||||||    
T  11649393 taaaaccaacttttattgtttttatttcgtttatattacaaaagtcaactcaactgcctagggca 11649329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 52628956 - 52629036
Alignment:
Q  396 gaaattggcatgcaatagaatgagaattgaaaccccgattgattttccctttttgttgttgtgttcttacatgtgtgaattt 477  Q
    ||||||| |||||||| ||||||| ||||||| ||   ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  52628956 gaaattgacatgcaat-gaatgaggattgaaaacctagttgattttccctttttgttattgtgttgttacatgtgtggattt 52629036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 11649496 - 11649444
Alignment:
Q  89 aattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaa 141  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  11649496 aattatgagtgcaaattaccataggagaacttcggaggattcgaaggtcttaa 11649444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 31979285 - 31979341
Alignment:
Q  404 catgcaatagaatgagaattgaaaccccgattgattttccctttttgttgttgtgtt 460  Q
    ||||||||||||||| |||||||||||  ||||||||  ||||||||||||||||||    
T  31979285 catgcaatagaatgataattgaaaccctaattgatttaacctttttgttgttgtgtt 31979341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 553
Target Start/End: Original strand, 31980626 - 31980692
Alignment:
Q  487 gcttaaaatctttaagtgagattaacgagtattgtgattagtgtgagaaaattagattttaatgaaa 553  Q
    |||| |||| |||| ||||||| || | |||||||||||||| |||||||||||| |||||||||||    
T  31980626 gcttgaaatatttatgtgagatcaatgtgtattgtgattagtatgagaaaattaggttttaatgaaa 31980692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 26060668 - 26060732
Alignment:
Q  164 taaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    ||||||||||||||||||||||  || | ||||| ||||||||  ||||||| ||||||||||||    
T  26060668 taaaaccaacttttattgtttttatttcatttatattacaaaaatcaactcacctgcctagggca 26060732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 2542041 - 2542128
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagt-tttggttcacttgccaaatctctatca 352  Q
    ||||| ||||||| ||||  || ||||||||| ||||||||| ||||| ||||||||| |  |||||| |||||||||||| |||||||    
T  2542041 ttgctcagtagaagttaaatacagtcctcgtggatacgaatt-atttattacttcgattgactttggtacacttgccaaatatctatca 2542128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 3e-77; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 23673671 - 23673345
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  23673671 taggtcaagagattgggtagaattactttgttaatttgtcgttaaactagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 23673572  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaa--acaactcaactgcctag 222  Q
    |||||| |||||||||| ||||| | ||| |||| |||| ||| | |||||||||||||||   | ||||||| |||||||   |||  |||||||||||    
T  23673571 ggattcgaaggtcttaaccatacatctctctaattttctaaaaccaaacttttattgtttttaatccgtttattttacaaatgccaatccaactgcctag 23673472  T
Q  223 ggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgat 322  Q
    ||||| |  |  || |  ||||||||||||||||        ||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  23673471 ggcaacc--ttgaatttaatacatcctttttgat-aaagaaattgttgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgat 23673375  T
Q  323 agttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||||||||||||||||||||    
T  23673374 agttttggttcacttgccaaatctctatca 23673345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 25 - 353
Target Start/End: Original strand, 36326845 - 36327172
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||  ||||||||| |    
T  36326845 taggtcaagagattgggtagaattactttgttaatctatcgttaaattagataatcattgcttgaattaggagtgcaaattaccatatgagaacttcgga 36326944  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaa-acaactc-aactgcctag 222  Q
    ||||||||||||||||| ||||| | ||| |||| |||| ||| | |||||||||||||||   | ||||||| ||||||| || | || |||| |||||    
T  36326945 ggattcaaaggtcttaaccatacatctctctaattttctaaaaccaaacttttattgtttttaatccgtttattttacaaataccaatctaacttcctag 36327044  T
Q  223 ggcaatcaatataaatct-atacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    ||||   | | | ||| | ||||||| ||||||||        |||| |||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  36327045 ggca---actttgaatttaatacatcttttttgat-aaagaaattgcagagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcga 36327140  T
Q  322 tagttttggttcacttgccaaatctctatcat 353  Q
    ||||||||||||||||||||||| ||||||||    
T  36327141 tagttttggttcacttgccaaatatctatcat 36327172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 354
Target Start/End: Original strand, 16294817 - 16295145
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| |||||||| || ||||||||||||||||||||| ||||||||| |    
T  16294817 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgattaaactaggagtgcaaattaccataggagaacttcgga 16294916  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttatt-gttttatttacgtttatgttacaaaa-caactcaactgcctag 222  Q
    |||||| |||| ||||| ||||||| |||  ||| |||| ||||| ||  |||||| |||||   |  ||||||| ||||||| ||||||||||||||||    
T  16294917 ggattcgaaggacttaaccatacttctctc-aattttctgaaaactaatctttatttgtttttaatcggtttatgatacaaaatcaactcaactgcctag 16295015  T
Q  223 ggcaatcaatataaatct-atacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    |||| ||||||||||| | |||||||||||  |||        |||||||||||||||||||||||||||||||| ||  ||  ||||||| ||||||||    
T  16295016 ggca-tcaatataaattttatacatcctttc-gataacgaaa-ttgctgagtagaaattaacaacggtcctcgtggatttgatcttatttattacttcga 16295112  T
Q  322 tagttttggttcacttgccaaatctctatcatt 354  Q
    |||||||||||||||||||||||||||||||||    
T  16295113 tagttttggttcacttgccaaatctctatcatt 16295145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 32576013 - 32575685
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||| |||| |||| | |||||  |||||||| |||| |||||| |||| ||||  ||||| ||||||||||||||| ||||| ||| ||||| |    
T  32576013 taggtcaagggatttggtagagttactaagttaatctgtcgtgaaactaaataatcattttttgaactaggagtgcaaattatcataggagagcttcgga 32575914  T
Q  125 ggattcaaaggtcttaatcatact--tatctttaatattcttaaaaccaacttttattgttttatttacgtttatgtta-caaaacaactcaactgccta 221  Q
    |||||| |||||||||| ||||||  | ||| ||||||||||||||||||||||||||||||||||||||||||  |||  |||||||  ||||||||||    
T  32575913 ggattcgaaggtcttaaccatacttctttctctaatattcttaaaaccaacttttattgttttatttacgtttactttataaaaacaatccaactgccta 32575814  T
Q  222 gggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    ||| || ||||  || |  ||||||| ||| | ||        | | ||||||||| |||||||||||||||||| ||||||||||||||| |||||| |    
T  32575813 gggtaa-caattgaatttaatacatcatttattat-aacgaaatcgttgagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcaa 32575716  T
Q  322 tagttttggttcacttgccaaatctctatca 352  Q
    |||| |||||||||||||||||| |||||||    
T  32575715 tagtgttggttcacttgccaaatatctatca 32575685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 75 - 253
Target Start/End: Original strand, 40017948 - 40018126
Alignment:
Q  75 ataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact 174  Q
    |||| ||||| ||||||||||||||||||||||||||| |||  |||| ||||||| |||||||||| ||||||| |||  | | |||||||| |   ||    
T  40017948 ataatcattggttgaattaggagtgcaaattaccataggagagtttcggaggattcgaaggtcttaaccatacttctctcaatttttcttaaaccagtct 40018047  T
Q  175 tttattgttttatttacgtttatgttacaaaacaactcaactgcctagggcaatcaatataaa-tctatacatccttttt 253  Q
     ||||||||||   | ||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  40018048 cttattgtttttaatccgtttatgttacaaatcaactcaactgcctagggc-atcaatataaattttatacatccttttt 40018126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 25 - 226
Target Start/End: Original strand, 31626468 - 31626671
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| ||||  |||||||||||||||||||||||||||||||| ||| ||||| |    
T  31626468 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataataattgattgaattaggagtgcaaattaccataggagagcttcgga 31626567  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttatt-gttttatttacgtttatgttacaaaa-caactcaactgccta 221  Q
    |||||| || | ||||| ||| ||| |||   || ||| ||||||||| | ||||||  ||||| || | |||||||||||||| |||||||||||||||    
T  31626568 ggattcgaatgacttaaccattcttctctcagattttc-taaaaccaatcctttattatttttaattccttttatgttacaaaatcaactcaactgccta 31626666  T
Q  222 gggca 226  Q
    |||||    
T  31626667 gggca 31626671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 31528307 - 31528635
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattg-aattaggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| ||||||| | | ||||||||||||||||||| || ||| |||       
T  31528307 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccacaggagagctttag 31528406  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattctt-aaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgcct 220  Q
    ||||||| |||| ||||| ||||||| || | ||| ||||| |||||||| | |||||||||||   |  ||||||||||| ||| ||||||||||||||    
T  31528407 aggattcgaaggacttaaccatacttctc-tcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcct 31528505  T
Q  221 agggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcg 320  Q
    ||||| | |||||||||| |||||||||||||| ||        ||||| ||||||| ||||  || ||||||||| | || ||||| |||| |||||||    
T  31528506 agggc-accaatataaatttatacatcctttttaat-aatgaaattgctaagtagaagttaaatacagtcctcgtggaaacaaattt-tttattacttcg 31528602  T
Q  321 atag-ttttggttcacttgccaaatctctatca 352  Q
    || |  ||||||||||||||||||| |||||||    
T  31528603 atcgaatttggttcacttgccaaatatctatca 31528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 253
Target Start/End: Original strand, 13709995 - 13710218
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaac-ttcgtaggatt 129  Q
    ||||||| ||||| ||||||||||||||||| | ||| |||||||||| |||||  | |||||||||||||||||| ||||| ||| | |||  | ||||    
T  13709995 aagagatcgggtagaattactttgttaatctgttgttgaactagataatcattgcctaaattaggagtgcaaattatcataggagagctttcagatgatt 13710094  T
Q  130 caaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaacaactcaactgcctagggcaat 228  Q
      |||||||||| ||||||| |||  ||| ||| ||||||||| |||||||||||||   | ||||||||||||||  |||||||||| |||  ||| ||    
T  13710095 tgaaggtcttaaccatacttctctcaaattttc-taaaaccaatcttttattgtttttaatccgtttatgttacaactcaactcaacttcctcaggc-at 13710192  T
Q  229 caatataaa-tctatacatccttttt 253  Q
    ||||||||| | ||||||||||||||    
T  13710193 caatataaattttatacatccttttt 13710218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 24385014 - 24384925
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaattta--tttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||| ||| ||| |||||||||||||||||  |||| |||||||||||||||||| |||||||||||| |||||||    
T  24385014 ttgctaagtagaaattaataacagtcatcgtgaatacgaatttaattttattacttcgatagttttggtacacttgccaaatatctatca 24384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 29436025 - 29436088
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagtttt 328  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||| |||||||||||||||    
T  29436025 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattattacttcgatagtttt 29436088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 38315876 - 38315809
Alignment:
Q  277 aattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaat 344  Q
    |||||||||||||||||||| ||||||| ||  |||||||||||||||||||| | ||||| ||||||    
T  38315876 aattaacaacggtcctcgtggatacgaactttattactacttcgatagttttgatacacttaccaaat 38315809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 40927916 - 40927966
Alignment:
Q  410 atagaatgagaattgaaaccccgattgattttccctttttgttgttgtgtt 460  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  40927916 atagaatgagaattgaaaccctaattgattttccctttttgtttttgtgtt 40927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 27409451 - 27409395
Alignment:
Q  404 catgcaatagaatgagaattgaaaccccgattgattttccctttttgttgttgtgtt 460  Q
    ||||||||||||||| |||||||||||  ||||||||  ||||||||||||||||||    
T  27409451 catgcaatagaatgataattgaaaccctaattgatttaacctttttgttgttgtgtt 27409395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 1503256 - 1503204
Alignment:
Q  288 gtcctcgtgaatacgaattta-tttactacttcgatagttttggttcacttgc 339  Q
    ||||||||| ||||||||||| |||| ||||||||||||||| || |||||||    
T  1503256 gtcctcgtggatacgaatttattttattacttcgatagttttagtacacttgc 1503204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 1506460 - 1506408
Alignment:
Q  288 gtcctcgtgaatacgaattta-tttactacttcgatagttttggttcacttgc 339  Q
    ||||||||| ||||||||||| |||| ||||||||||||||| || |||||||    
T  1506460 gtcctcgtggatacgaatttattttattacttcgatagttttagtacacttgc 1506408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 8427144 - 8427259
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||| ||| ||  | ||| ||||||| | ||||||||||| | ||||||||||||  ||| ||||||||||||| | |||||| ||| |    
T  8427144 taggtcaagagattgagtagaaccattttattaatctgttgttaaactagaaagacattgattgaa-caggggtgcaaattaccaaataagaacatcgga 8427242  T
Q  125 ggattcaaaggtcttaa 141  Q
     ||||| || |||||||    
T  8427243 tgattcgaatgtcttaa 8427259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 13572118 - 13572070
Alignment:
Q  276 aaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag 324  Q
    ||||||||||||||||||||  ||||||| ||  |||||||||||||||    
T  13572118 aaattaacaacggtcctcgtagatacgaactttattactacttcgatag 13572070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 13979405 - 13979730
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||| |||||| || | |||||  |||||||| || | |||||| |||| ||||| ||||| | ||||||||||||||||||| ||| ||||| |    
T  13979405 taggtcaagggattggatagagttactaagttaatctgtcatgaaactaaataatcattgtttgaacttggagtgcaaattaccataggagagcttcgga 13979504  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgtta--caaaacaactcaactgcctag 222  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||   ||| |||  ||||||||| |    
T  13979505 ggattcaaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattgttttatttacgtttactttattaaaaccaatccaactgccttg 13979604  T
Q  223 ggcaatca-atataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    ||||| || ||||   |  |||||||| ||| |||        |||||||||||||||||||| | ||||||||| || ||| |||||||| ||||||||    
T  13979605 ggcaaccagatat---ttaatacatcc-tttcgat-aaagaaattgctgagtagaaattaacagcagtcctcgtggattcgattttatttattacttcga 13979699  T
Q  322 tagttttggttcacttgccaaatctctatca 352  Q
    |||||||||||||||||||||||||||||||    
T  13979700 tagttttggttcacttgccaaatctctatca 13979730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 46731414 - 46731529
Alignment:
Q  26 aggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtag 125  Q
    |||| ||||||||||||| | ||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||    
T  46731414 aggtcaagagattgggtagagttactttgttaatatgtcgttgaactagataatcattgattgaattaggagtgcaaattaccatatgagaacttcggag 46731513  T
Q  126 gattcaaaggtcttaa 141  Q
    ||||| ||||||||||    
T  46731514 gattcgaaggtcttaa 46731529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 35091912 - 35091823
Alignment:
Q  352 attaggttctaattataataaaaggaaattggaattagcaattagaaattggcatgcaatagaatgagaattgaaaccccgattgatttt 441  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||||    
T  35091912 attaggttctaattataataaaagggaactggaattagcaattagaaattgacatgcaatagaatgagaactgaaaccctaattgatttt 35091823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 39563837 - 39563634
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| |||||||  |||||||| |||| |||||| |||| ||||||||||||||||||||||||||| ||||| ||| | ||| |    
T  39563837 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataaccattgattgaattaggagtgcaaattatcataggagagcgtcgga 39563738  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaa-ctttta-ttgttttatttacgtttatgttacaaaa-caactcaactgccta 221  Q
    |||||| |||| ||||| ||| ||| |||   || ||| ||||||||| |||||| |  ||||| ||  ||||||||||||||| |||||||||||||||    
T  39563737 ggattcgaaggacttaaccattcttctctcagattttc-taaaaccaatcttttactatttttaattttgtttatgttacaaaatcaactcaactgccta 39563639  T
Q  222 gggca 226  Q
    |||||    
T  39563638 gggca 39563634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 443 - 553
Target Start/End: Complemental strand, 35091783 - 35091672
Alignment:
Q  443 cctttttgttgttgtgttcttacatgtgtgaatttgatcaacta-gcttaaaatctttaagtgagattaacgagtattgtgattagtgtgagaaaattag 541  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||| || ||||||| | |||||||||||||| |||||||||||     
T  35091783 cctttttgttgttgtgttcttacatgtgtgaatttgatcaattaggctcaaaaactttatgttagattaatgggtattgtgattagtatgagaaaattaa 35091684  T
Q  542 attttaatgaaa 553  Q
     |||||||||||    
T  35091683 gttttaatgaaa 35091672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 46731612 - 46731699
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  46731612 ttgctgagtagaagttaacaacggtcctcgtggatacaaatttattcattacttcgatagtttttgttcacttgccaaatctctatca 46731699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 22626638 - 22626312
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| |||||||||| || |||||||  |||||||  |||| |||||| |||| ||||||| | ||| |||||||||||||||||||| ||| ||| |     
T  22626638 taggtcaagagattggatagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 22626539  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgccta 221  Q
    ||||||| |||| ||||| ||||||| || | ||| ||| |||| |||| | |||||||||||   |  ||||||||||| ||| |||||||||||||||    
T  22626538 aggattcgaaggacttaaccatacttctc-tcaattttc-taaatccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 22626441  T
Q  222 gggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    |||| | |||||||||| |||||||||||||| ||        ||||| ||||||| ||||  || ||||||||| | ||||| || |||| ||||||||    
T  22626440 gggc-accaatataaatttatacatcctttttaat-aatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaactt-tttattacttcga 22626344  T
Q  322 tag-ttttggttcacttgccaaatctctatca 352  Q
    | |  ||||||||||||||||||| |||||||    
T  22626343 tcgaatttggttcacttgccaaatatctatca 22626312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 11138896 - 11138570
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| |||||||||| || |||||||  |||||||  |||| |||||| |||| ||||||| | ||| |||||||||||||||||||| ||| ||| |     
T  11138896 taggtcaagagattggatagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 11138797  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgccta 221  Q
    ||||||| |||| ||||| ||||||| || | ||| ||| | || |||| | | |||||||||   |  ||||||||||| ||| |||||||||||||||    
T  11138796 aggattcgaaggacttaaccatacttctc-tcaattttc-tgaatccaattctatattgtttttaatcagtttatgttactaaatcaactcaactgccta 11138699  T
Q  222 gggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    |||| | |||||||||| |||||||||||||| ||        ||||| ||||||| ||||  || ||||||||| | ||||| || |||| ||||||||    
T  11138698 gggc-accaatataaatttatacatcctttttaat-aatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaactt-tttattacttcga 11138602  T
Q  322 tag-ttttggttcacttgccaaatctctatca 352  Q
    | |  ||||||||||||||||||| |||||||    
T  11138601 tcgaatttggttcacttgccaaatatctatca 11138570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 47412101 - 47412222
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||| ||| |||||   ||||||||| | |||||| ||||| |||||||||||||||  | |||||||||||| ||||||||| |   |    
T  47412101 taggtcaagagattgagtagaattatcgtgttaatctgttgttaaattagatgaacattgattgaattgtgggtgcaaattaccgtagaagaacattaga 47412200  T
Q  125 ggattcaaaggtcttaatcata 146  Q
    ||||||||||||||||||||||    
T  47412201 ggattcaaaggtcttaatcata 47412222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 27055149 - 27055237
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatcat 353  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||   |||||||||| | ||||||    
T  27055149 ttgctaagtagaaattaacaacggtcctcgtggatacgaaatttattactacttcgatagttttggtatgcttgccaaatatttatcat 27055237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 19869255 - 19869343
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||||||||| ||||| |||| || |||||||||||| |||||||    
T  19869255 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactactttgatagattttagtacacttgccaaatatctatca 19869343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 26822122 - 26822039
Alignment:
Q  269 tgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    |||||| ||||||||| ||||||| ||| ||||||||||  ||| |||||||||||||||||| ||||| |||||  |||||||    
T  26822122 tgagtaaaaattaacagcggtccttgtggatacgaattttattattacttcgatagttttggtacactttccaaaagtctatca 26822039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 50096829 - 50096902
Alignment:
Q  155 taatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    |||| |||| |||||||||||||| ||||||  |||||||||||||||||||  |||||||||||| |||||||    
T  50096829 taattttctaaaaaccaacttttactgtttttattacgtttatgttacaaaaatcaactcaactgcttagggca 50096902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 35366295 - 35366387
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaac 118  Q
    ||||| ||||||||| ||| |||||  |||||||| | |||||||| || || ||||||||||||||| || |||||||||||| |||||||||    
T  35366295 taggtcaagagattgagtagaattatcttgttaatttgtcgttaaattatatgaacattgattgaatt-ggggtgcaaattaccgtagaagaac 35366387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 25492175 - 25492263
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| ||||||||||||||||| |||||||| ||||||| ||  |||||| || ||||| ||||||| |||||| ||| | |||||||    
T  25492175 ttgctaagtagaaattaacaacgatcctcgtggatacgaactttattactattttgatagcttttggtacacttgtcaattatctatca 25492263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 20536520 - 20536459
Alignment:
Q  166 aaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    ||||||||||||||||||||| |||||||| ||||||| ||  |||| |||||||||||||||    
T  20536520 aaaccaacttttattgtttta-ttacgtttgtgttacacaagtcaacccaactgcctagggca 20536459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 3306147 - 3306213
Alignment:
Q  288 gtcctcgtgaatacgaattta-tttactacttcgatagtt-ttggttcacttgccaaatctctatca 352  Q
    ||||||||| ||||||| ||| |||| ||||||||||||| ||||| |||||||||||| |||||||    
T  3306147 gtcctcgtggatacgaacttaatttattacttcgatagttattggtacacttgccaaatatctatca 3306213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 30157863 - 30157797
Alignment:
Q  288 gtcctcgtgaatacgaattta-tttactacttcgatagtt-ttggttcacttgccaaatctctatca 352  Q
    ||||||||| ||||||| ||| |||| ||||||||||||| ||||| |||||||||||| |||||||    
T  30157863 gtcctcgtggatacgaacttaatttattacttcgatagttattggtacacttgccaaatttctatca 30157797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 32366927 - 32366877
Alignment:
Q  309 tttactacttcgatagt-tttggttcacttgccaaatctctatcattaggt 358  Q
    ||||||||||||||||| |||||| |||||||||||  |||||||||||||    
T  32366927 tttactacttcgatagtatttggtacacttgccaaaattctatcattaggt 32366877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 4225659 - 4225619
Alignment:
Q  310 ttactacttcgatagttttggttcacttgccaaatctctat 350  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  4225659 ttactacttcgatagtattggtacacttgccaaatatctat 4225619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 18883509 - 18883561
Alignment:
Q  288 gtcctcgtgaatacgaattta-tttactacttcgatagttttggttcacttgc 339  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| || |||||||    
T  18883509 gtcctcgtgaatacgaacttattttactactttgatagttttagtacacttgc 18883561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 8e-44; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 31 - 344
Target Start/End: Complemental strand, 12575620 - 12575308
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||  | ||||||| |||||||    
T  12575620 aagagattaggtagaattactttgttaatctgtcgttaaactagattatcattgcttgaattaggagtgcaaattaccataagaaaacttcggaggattc 12575521  T
Q  131 aaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggcaa 227  Q
    || |||||||| ||||||| ||| |||| |||| |||||||| |||||||||||||   |   ||||||||||||||  ||||||||||||||||||||     
T  12575520 aatggtcttaaccatacttctctctaattttct-aaaaccaatcttttattgtttttaatcaatttatgttacaaaaatcaactcaactgcctagggca- 12575423  T
Q  228 tcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-tt 326  Q
     | ||  || |  ||||||||||||| ||        ||| ||||||||| |||||||| ||||||||| ||||||| ||||||| ||||||||| |  |    
T  12575422 -ccattgaatttaatacatcctttttaat-aatgaacttgttgagtagaagttaacaacagtcctcgtggatacgaa-ttatttattacttcgattgaat 12575326  T
Q  327 ttggttcacttgccaaat 344  Q
    ||||| ||||||||||||    
T  12575325 ttggtacacttgccaaat 12575308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 86 - 352
Target Start/End: Original strand, 14418445 - 14418707
Alignment:
Q  86 ttgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgtttt 185  Q
    ||||||||||||||||||||| ||||| |||| |||| ||||||| || ||||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  14418445 ttgaattaggagtgcaaattatcataggagaaattcggaggattcgaatgtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttt 14418544  T
Q  186 atttacgtttatgttacaaaacaactcaactgcctagggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaa 285  Q
       |  |||||||||| ||| ||||||||||||||||||||| | ||  || |  | | ||||||||||||        ||||| ||| | | |||||||    
T  14418545 taatttgtttatgttaaaaaccaactcaactgcctagggcaa-ccattgaatttaacatatcctttttgat-aaagaaattgctaagttgtagttaacaa 14418642  T
Q  286 cggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||  |||||||    
T  14418643 cggtcctcgtgga-acgaa-ttatttactacttcgatagctttggttcacttgccaaaaatctatca 14418707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 41779068 - 41778866
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| ||||||||||||| | ||| | ||||||||| |||| || |||||||| ||||| ||||||||  ||||||||||| ||||| ||||||||| |    
T  41779068 taggtcaagagattgggtagagttattgtgttaatctgtcgtgaacctagataatcattgtttgaattactagtgcaaattagcataggagaacttcgga 41778969  T
Q  125 ggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctag 222  Q
     ||||  |||||||||| ||||||| |||||||| ||| |||| | | |||||||||||||   | ||||||||||||||||  ||| ||||||||||||    
T  41778968 agatttgaaggtcttaaccatacttctctttaatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctag 41778870  T
Q  223 ggca 226  Q
    ||||    
T  41778869 ggca 41778866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 13096946 - 13097099
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||| ||||| || |||||||||||||||||| ||||| | ||||||| |||||||    
T  13096946 aagagattgggtagaattactttgttaatctttcattgaactagataatcattgcttaaattaggagtgcaaatta-cataggataacttcggaggattc 13097044  T
Q  131 aaaggtcttaatcatacttatctttaatattcttaaaaccaa-cttttattgtttt 185  Q
     |||||||||| ||||||| ||| |||| ||| |||||| || |||||||||||||    
T  13097045 gaaggtcttaaccatacttctctctaattttc-taaaactaatcttttattgtttt 13097099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 39659799 - 39659712
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||| ||||||||||||||| |||||||||| ||||||| ||  |||||||||||||||||| ||| |||||||||||| |||||||    
T  39659799 ttgctaagtagaaattaacaatggtcctcgtggatacgaactttattactacttcgatagtttcggtacacttgccaaatatctatca 39659712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 9467341 - 9467429
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| || ||||||||||||||||||||||| ||||||| ||  ||||||||||||||| ||||||| |||||||||||| |||||||    
T  9467341 ttgctaagaagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatca 9467429  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 453863 - 453951
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatag-ttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||| |||||| |||| ||||||| |||||| ||||| |||||||    
T  453863 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattagtacttccatagtttttggtacacttgtcaaatatctatca 453951  T

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Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 41836382 - 41836318
Alignment:
Q  164 taaaaccaacttttattgttttatttacgtttatgttacaaaa--caactcaactgcctagggca 226  Q
    ||||||||||||||||||||||  || ||||||| ||||||||  ||||||||||||||||||||    
T  41836382 taaaaccaacttttattgtttttatttcgtttatattacaaaagtcaactcaactgcctagggca 41836318  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 41836485 - 41836433
Alignment:
Q  89 aattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaa 141  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  41836485 aattatgagtgcaaattaccataggagaacttcggaggattcgaaggtcttaa 41836433  T

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Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 44008245 - 44008335
Alignment:
Q  56 taatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcata 146  Q
    ||||||||||| |||||| |||| ||||| ||||| |||||||||| ||||||| ||  || ||||| ||||||| |||||| ||| ||||    
T  44008245 taatctatcgtgaaactaaataatcattgtttgaactaggagtgcagattaccaaaggcgagcttcggaggattcgaaggtcataaccata 44008335  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 13332365 - 13332429
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttg 329  Q
    ||||| |||| |||||||||||||||||| || |||| || ||  ||||||||||||||||||||    
T  13332365 ttgctaagtataaattaacaacggtcctcatggatacaaactttattactacttcgatagttttg 13332429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 343
Target Start/End: Complemental strand, 22173744 - 22173710
Alignment:
Q  309 tttactacttcgatagttttggttcacttgccaaa 343  Q
    ||||||||||||||||||||||| |||||||||||    
T  22173744 tttactacttcgatagttttggtacacttgccaaa 22173710  T

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Target: scaffold0363 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 86 - 352
Target Start/End: Complemental strand, 273 - 11
Alignment:
Q  86 ttgaattaggagtgcaaattaccatagaagaacttcgtaggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaacttttattgtttt 185  Q
    ||||||||||||||||||||| ||||| |||| |||| ||||||| || ||||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  273 ttgaattaggagtgcaaattatcataggagaaattcggaggattcgaatgtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttt 174  T
Q  186 atttacgtttatgttacaaaacaactcaactgcctagggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaa 285  Q
       |  |||||||||| ||| ||||||||||||||||||||| | ||  || |  | | ||||||||||||        ||||| ||| | | |||||||    
T  173 taatttgtttatgttaaaaaccaactcaactgcctagggcaa-ccattgaatttaacatatcctttttgat-aaagaaattgctaagttgtagttaacaa 76  T
Q  286 cggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||  |||||||    
T  75 cggtcctcgtgga-acgaa-ttatttactacttcgatagctttggttcacttgccaaaaatctatca 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 9781 - 10010
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| |||||| |||| ||||||||| ||| ||||||||||||| |||||| ||| |||||     
T  9781 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgattgtatttaggagtgcaaattgccataggagagcttcgg 9880  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgccta 221  Q
    ||||||| |||| ||||| ||||||| || | ||| |||| |||||||| | |||||||||||   |  ||||||||||| ||| |||||||||||||||    
T  9881 aggattcgaaggacttaaccatacttctc-tcaattttctaaaaaccaattatttattgtttttaatcagtttatgttactaaatcaactcaactgccta 9979  T
Q  222 gggcaatcaatataaatctatacatccttttt 253  Q
    |||  | |||||||||| ||||||||||||||    
T  9980 ggg-gaccaatataaatttatacatccttttt 10010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 6131 - 5999
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgtaggattc 130  Q
    ||||||||||||| | ||| | ||||||||| |||| || |||||||| ||||| ||||||||| ||||||||||||||||| ||||| ||| |||||||    
T  6131 aagagattgggtagagttattgtgttaatctgtcgtgaacctagataatcattgtttgaattagtagtgcaaattaccataggagaacctcggaggattc 6032  T
Q  131 aaaggtcttaatcatacttatctttaatattct 163  Q
     |||||||||| ||||||| ||| |||| ||||    
T  6031 gaaggtcttaaccatacttctctctaattttct 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 2930 - 2814
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatagaagaacttcgta 124  Q
    ||||| |||||||| |||| |||||||   ||||||| |||| |||||| |||| ||||||||||| ||||||||||||||||||||| ||| ||||| |    
T  2930 taggtcaagagatttggtagaattactaccttaatctttcgtgaaactatataatcattgattgaactaggagtgcaaattaccataggagagcttcgga 2831  T
Q  125 ggattcaaaggtcttaa 141  Q
    |||||||||||||||||    
T  2830 ggattcaaaggtcttaa 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 2706 - 2619
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||| |||||||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  2706 ttgctgagtagaagttaacaacggtcctcgtggatacgatcttatttattacttcgatagttttggtccacttgccaaatctccatca 2619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 352
Target Start/End: Complemental strand, 24510 - 24185
Alignment:
Q  25 taggtaaagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaatt-aggagtgcaaattaccatagaagaacttcgt 123  Q
    ||||| ||||||||||||| |||||||  |||||||  |||| | |||| |||| |||| |||| ||| |||||||||||||||||||| ||| |||||     
T  24510 taggtcaagagattgggtagaattactaagttaatccgtcgtgatactaaataatcatttattgtatttaggagtgcaaattaccataggagagcttcgg 24411  T
Q  124 aggattcaaaggtcttaatcatacttatctttaatattcttaaaaccaact-tttattgttttatttacgtttatgttac-aaaacaactcaactgccta 221  Q
    ||||||| |||| ||||| ||| ||| || | ||| |||| |||||||| | |||||||||||   |  |||||  |||| ||| |||||||||||||||    
T  24410 aggattcgaaggacttaaccatgcttctc-tcaattttctaaaaaccaattctttattgtttttaatcagttta--ttactaaatcaactcaactgccta 24314  T
Q  222 gggcaatcaatataaatctatacatcctttttgatnnnnnnnnttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcga 321  Q
    |||| | |||||  ||| |||||||||||||| ||        ||| ||||||||| ||||  || ||||||||| | || |||||| ||||||||||||    
T  24313 gggc-accaataataatttatacatcctttttaat-aatgaaattgttgagtagaagttaaatacagtcctcgtggaaacaaattta-ttactacttcga 24217  T
Q  322 tag-ttttggttcacttgccaaatctctatca 352  Q
    ||| ||||||| |||||||||||| |||||||    
T  24216 tagcttttggtacacttgccaaatttctatca 24185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 33817 - 33730
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||| |||||||||||||||||||||||||| |||| || ||  |||||||||||||||||||||| |||||||||||| |||||||    
T  33817 ttgctaagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagttttggtacacttgccaaatatctatca 33730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 19596 - 19517
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaat 344  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||  ||||||||| || ||||||||| ||||||||||||    
T  19596 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactactttgacagttttggtacacttgccaaat 19517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 7313 - 7232
Alignment:
Q  31 aagagattgggtataattactttgttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatag 112  Q
    |||||||||  || |||||||  |||||||| |||| |||||| |||| ||||||||||||||||||| |||||||||||||    
T  7313 aagagattgaatagaattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtacaaattaccatag 7232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 2641 - 2699
Alignment:
Q  54 gttaatctatcgttaaactagataaacattgattgaattaggagtgcaaattaccatag 112  Q
    |||||||| |||| |||||| |||| ||||||||||||||||||||||| |||||||||    
T  2641 gttaatctgtcgtgaaactaaataatcattgattgaattaggagtgcaagttaccatag 2699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 3664 - 3739
Alignment:
Q  265 ttgctgagtagaaattaacaacggtcctcgtgaatacgaatttatttactacttcgatagttttggttcacttgccaaa 343  Q
    ||||||||||||| |||||||||||||||||| |||| |||   |||| |||||||||||  ||||| |||||||||||    
T  3664 ttgctgagtagaagttaacaacggtcctcgtggatacaaat---tttattacttcgatagaattggtacacttgccaaa 3739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 19593 - 19636
Alignment:
Q  309 tttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||||||||||||| |||||||||||  |||||||    
T  19593 tttactacttcgatagttttggtacacttgccaaaaatctatca 19636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 29672 - 29715
Alignment:
Q  309 tttactacttcgatagttttggttcacttgccaaatctctatca 352  Q
    ||||||||||||||||||||||| |||||||||||  |||||||    
T  29672 tttactacttcgatagttttggtacacttgccaaaaatctatca 29715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 343
Target Start/End: Complemental strand, 14128 - 14094
Alignment:
Q  309 tttactacttcgatagttttggttcacttgccaaa 343  Q
    ||||||||||||||||||||||| |||||||||||    
T  14128 tttactacttcgatagttttggtacacttgccaaa 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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