View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1350R-Insertion-6 (Length: 354)

Name: NF1350R-Insertion-6
Description: NF1350R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1350R-Insertion-6
NF1350R-Insertion-6
[»] scaffold0031 (1 HSPs)
scaffold0031 (9-352)||(43098-43441)
[»] chr8 (38 HSPs)
chr8 (245-352)||(13160671-13160779)
chr8 (277-352)||(2626488-2626563)
chr8 (245-346)||(45071240-45071342)
chr8 (245-352)||(12670307-12670414)
chr8 (276-352)||(17823545-17823621)
chr8 (266-352)||(28407385-28407471)
chr8 (254-352)||(39461062-39461162)
chr8 (245-346)||(36720771-36720874)
chr8 (267-341)||(18164840-18164914)
chr8 (278-352)||(20869588-20869662)
chr8 (278-352)||(30454187-30454261)
chr8 (277-342)||(30962864-30962929)
chr8 (245-352)||(35261648-35261757)
chr8 (277-349)||(26954104-26954176)
chr8 (245-351)||(28817683-28817791)
chr8 (277-345)||(20284164-20284232)
chr8 (277-345)||(21070793-21070861)
chr8 (245-352)||(29521742-29521851)
chr8 (276-352)||(7136619-7136695)
chr8 (277-345)||(14018060-14018128)
chr8 (277-352)||(6760791-6760866)
chr8 (280-351)||(24245421-24245491)
chr8 (277-344)||(24365151-24365218)
chr8 (277-346)||(25250497-25250566)
chr8 (245-352)||(44530118-44530227)
chr8 (244-339)||(31457155-31457251)
chr8 (277-345)||(42083790-42083858)
chr8 (266-345)||(44781585-44781665)
chr8 (249-345)||(44742580-44742678)
chr8 (277-346)||(8897855-8897924)
chr8 (245-354)||(12625856-12625968)
chr8 (277-345)||(22598133-22598201)
chr8 (245-335)||(23000276-23000365)
chr8 (278-342)||(35105902-35105966)
chr8 (277-351)||(11748269-11748343)
chr8 (305-345)||(11001069-11001109)
chr8 (277-345)||(26457691-26457759)
chr8 (301-353)||(40607839-40607891)
[»] chr6 (23 HSPs)
chr6 (250-353)||(9161091-9161195)
chr6 (245-352)||(1346933-1347040)
chr6 (245-352)||(1354814-1354921)
chr6 (277-353)||(6024201-6024277)
chr6 (254-352)||(12221983-12222083)
chr6 (277-352)||(3815168-3815243)
chr6 (254-338)||(29355923-29356009)
chr6 (277-345)||(14975171-14975239)
chr6 (277-352)||(8409212-8409287)
chr6 (277-352)||(20400636-20400711)
chr6 (277-352)||(24734602-24734677)
chr6 (278-344)||(2166504-2166570)
chr6 (278-344)||(2178137-2178203)
chr6 (245-345)||(13905036-13905138)
chr6 (289-351)||(8417442-8417504)
chr6 (277-343)||(12063445-12063511)
chr6 (277-351)||(14553482-14553555)
chr6 (254-345)||(12889402-12889495)
chr6 (277-346)||(15866128-15866197)
chr6 (278-343)||(28007604-28007671)
chr6 (277-346)||(24097556-24097625)
chr6 (245-316)||(33138838-33138911)
chr6 (277-343)||(32068074-32068137)
[»] chr2 (44 HSPs)
chr2 (245-352)||(12023976-12024084)
chr2 (245-352)||(25249795-25249903)
chr2 (245-352)||(8455373-8455482)
chr2 (277-353)||(17896227-17896303)
chr2 (245-352)||(11514405-11514514)
chr2 (249-351)||(24200686-24200790)
chr2 (277-352)||(14530287-14530362)
chr2 (254-346)||(7214509-7214603)
chr2 (278-344)||(45235910-45235976)
chr2 (249-352)||(10543667-10543772)
chr2 (278-351)||(23397736-23397809)
chr2 (277-345)||(21377164-21377232)
chr2 (245-352)||(21779318-21779425)
chr2 (245-346)||(17623539-17623642)
chr2 (245-346)||(17667977-17668080)
chr2 (245-346)||(22371032-22371132)
chr2 (277-352)||(25079809-25079884)
chr2 (277-343)||(5841006-5841072)
chr2 (245-345)||(9671156-9671257)
chr2 (267-341)||(17380317-17380391)
chr2 (266-351)||(17705465-17705551)
chr2 (277-346)||(19977805-19977874)
chr2 (284-344)||(99361-99421)
chr2 (245-352)||(27573590-27573698)
chr2 (277-345)||(29419980-29420048)
chr2 (268-343)||(44604832-44604907)
chr2 (277-343)||(5450263-5450329)
chr2 (266-320)||(14444730-14444784)
chr2 (277-345)||(4516442-4516510)
chr2 (277-345)||(33795261-33795329)
chr2 (277-347)||(40416962-40417032)
chr2 (277-346)||(39914397-39914466)
chr2 (246-345)||(44521431-44521532)
chr2 (277-352)||(26684712-26684788)
chr2 (277-336)||(4852305-4852364)
chr2 (281-352)||(14544032-14544103)
chr2 (269-336)||(25641487-25641554)
chr2 (266-346)||(44643497-44643579)
chr2 (277-343)||(17472949-17473015)
chr2 (245-345)||(23145755-23145857)
chr2 (245-345)||(23557545-23557647)
chr2 (245-322)||(10546161-10546241)
chr2 (244-352)||(24860044-24860152)
chr2 (292-336)||(31821447-31821491)
[»] chr5 (31 HSPs)
chr5 (245-352)||(41014288-41014396)
chr5 (254-353)||(27328720-27328821)
chr5 (245-352)||(8170041-8170148)
chr5 (278-351)||(37024646-37024719)
chr5 (245-336)||(22907922-22908014)
chr5 (254-352)||(38879550-38879650)
chr5 (277-352)||(43334171-43334246)
chr5 (245-345)||(2838754-2838856)
chr5 (278-352)||(35710282-35710356)
chr5 (249-345)||(208989-209086)
chr5 (278-343)||(22861758-22861823)
chr5 (245-352)||(24448859-24448968)
chr5 (254-352)||(4619172-4619272)
chr5 (249-351)||(31299602-31299705)
chr5 (245-334)||(32703411-32703500)
chr5 (245-337)||(1850624-1850717)
chr5 (277-345)||(23974756-23974824)
chr5 (277-341)||(34074653-34074717)
chr5 (277-352)||(1565400-1565475)
chr5 (277-344)||(22187262-22187329)
chr5 (277-345)||(28516525-28516593)
chr5 (245-346)||(22600429-22600532)
chr5 (302-345)||(39079882-39079925)
chr5 (267-345)||(39301099-39301178)
chr5 (245-318)||(43574609-43574684)
chr5 (300-338)||(9794473-9794511)
chr5 (292-346)||(17419889-17419943)
chr5 (245-310)||(19143000-19143066)
chr5 (277-322)||(22025542-22025587)
chr5 (305-346)||(31362454-31362495)
chr5 (293-341)||(10634253-10634301)
[»] chr4 (55 HSPs)
chr4 (245-352)||(5648228-5648336)
chr4 (245-352)||(6430683-6430791)
chr4 (245-352)||(14590806-14590916)
chr4 (240-352)||(30639349-30639462)
chr4 (245-352)||(48598882-48598989)
chr4 (277-352)||(54730218-54730293)
chr4 (245-352)||(5306721-5306829)
chr4 (246-352)||(11054206-11054312)
chr4 (245-351)||(47528587-47528693)
chr4 (245-346)||(40915804-40915906)
chr4 (254-352)||(16911531-16911631)
chr4 (245-352)||(20224953-20225060)
chr4 (277-352)||(16408694-16408769)
chr4 (278-340)||(39077886-39077948)
chr4 (277-346)||(44363223-44363292)
chr4 (269-353)||(55830803-55830888)
chr4 (266-345)||(17315378-17315457)
chr4 (277-352)||(21646933-21647008)
chr4 (277-352)||(30352682-30352757)
chr4 (266-345)||(42164228-42164307)
chr4 (245-341)||(17043451-17043549)
chr4 (245-345)||(47441587-47441689)
chr4 (246-342)||(30496380-30496476)
chr4 (266-343)||(32478865-32478942)
chr4 (245-352)||(8473679-8473786)
chr4 (281-345)||(12257688-12257752)
chr4 (245-347)||(47443927-47444035)
chr4 (267-342)||(49938671-49938746)
chr4 (277-343)||(23580299-23580365)
chr4 (249-341)||(54175043-54175137)
chr4 (277-346)||(14983809-14983878)
chr4 (254-353)||(55766532-55766633)
chr4 (281-345)||(487230-487294)
chr4 (245-351)||(37494821-37494929)
chr4 (245-343)||(9832370-9832468)
chr4 (277-352)||(10660373-10660448)
chr4 (277-352)||(10874518-10874593)
chr4 (245-346)||(19027823-19027926)
chr4 (249-346)||(25343162-25343261)
chr4 (294-345)||(50856344-50856395)
chr4 (300-346)||(5313108-5313154)
chr4 (302-352)||(23501762-23501812)
chr4 (277-335)||(25463108-25463166)
chr4 (277-343)||(30690274-30690340)
chr4 (266-336)||(32629348-32629418)
chr4 (277-338)||(7385567-7385628)
chr4 (280-345)||(43035224-43035289)
chr4 (277-345)||(35567146-35567214)
chr4 (278-338)||(41018885-41018945)
chr4 (277-345)||(54640430-54640498)
chr4 (277-345)||(54966997-54967065)
chr4 (245-303)||(7909338-7909397)
chr4 (268-346)||(44357195-44357274)
chr4 (302-344)||(3580952-3580994)
chr4 (245-322)||(29207955-29208032)
[»] chr1 (51 HSPs)
chr1 (245-352)||(32632614-32632722)
chr1 (245-352)||(34725155-34725262)
chr1 (245-344)||(38478339-38478438)
chr1 (245-352)||(47214503-47214610)
chr1 (279-345)||(14617037-14617103)
chr1 (267-352)||(22930148-22930233)
chr1 (247-346)||(41319865-41319966)
chr1 (277-345)||(18724636-18724704)
chr1 (274-346)||(27474279-27474351)
chr1 (245-352)||(45812594-45812701)
chr1 (245-353)||(23768377-23768487)
chr1 (274-352)||(45402087-45402164)
chr1 (245-345)||(11596512-11596613)
chr1 (245-349)||(19414434-19414538)
chr1 (245-344)||(25468320-25468421)
chr1 (254-352)||(18944635-18944735)
chr1 (254-352)||(30395794-30395894)
chr1 (279-346)||(20036218-20036285)
chr1 (249-346)||(27201645-27201744)
chr1 (289-352)||(34714615-34714678)
chr1 (245-346)||(46248010-46248113)
chr1 (249-345)||(17470407-17470505)
chr1 (277-351)||(20004183-20004257)
chr1 (277-351)||(46991797-46991871)
chr1 (277-346)||(6925098-6925167)
chr1 (277-352)||(10668212-10668292)
chr1 (266-345)||(35117847-35117927)
chr1 (274-345)||(33222983-33223054)
chr1 (284-342)||(9939463-9939521)
chr1 (248-344)||(12126897-12126993)
chr1 (277-342)||(22327101-22327166)
chr1 (245-344)||(44485166-44485267)
chr1 (277-345)||(2435878-2435946)
chr1 (277-345)||(2435984-2436052)
chr1 (245-346)||(4430083-4430186)
chr1 (277-352)||(18335379-18335454)
chr1 (277-345)||(25290162-25290232)
chr1 (277-351)||(8197036-8197110)
chr1 (249-310)||(22324927-22324989)
chr1 (245-322)||(35253244-35253321)
chr1 (277-345)||(27136743-27136811)
chr1 (300-352)||(40424734-40424786)
chr1 (281-345)||(50760321-50760385)
chr1 (249-322)||(35005145-35005220)
chr1 (292-346)||(6983915-6983969)
chr1 (245-322)||(31272432-31272510)
chr1 (303-352)||(19932869-19932918)
chr1 (277-322)||(23371146-23371191)
chr1 (277-352)||(18742051-18742127)
chr1 (277-345)||(50811938-50812006)
chr1 (277-345)||(52910216-52910284)
[»] scaffold0005 (1 HSPs)
scaffold0005 (245-352)||(226462-226572)
[»] chr3 (42 HSPs)
chr3 (266-352)||(10870031-10870117)
chr3 (240-352)||(12914087-12914201)
chr3 (245-352)||(26869698-26869806)
chr3 (246-352)||(7696945-7697051)
chr3 (277-352)||(8247780-8247855)
chr3 (245-346)||(22122974-22123075)
chr3 (245-345)||(22609764-22609865)
chr3 (245-352)||(16735432-16735540)
chr3 (277-353)||(26782356-26782432)
chr3 (254-352)||(46421103-46421203)
chr3 (246-352)||(1217081-1217187)
chr3 (267-342)||(5173801-5173876)
chr3 (277-352)||(13730695-13730770)
chr3 (254-342)||(13628858-13628948)
chr3 (245-352)||(40272869-40272978)
chr3 (245-344)||(39203515-39203614)
chr3 (247-353)||(6411881-6411988)
chr3 (277-344)||(34420735-34420802)
chr3 (281-352)||(52926305-52926376)
chr3 (245-345)||(26573125-26573227)
chr3 (254-346)||(29366788-29366882)
chr3 (245-352)||(4495721-4495830)
chr3 (277-341)||(30928238-30928302)
chr3 (277-345)||(35417914-35417982)
chr3 (277-345)||(45620920-45620988)
chr3 (277-345)||(53062036-53062104)
chr3 (277-335)||(516417-516475)
chr3 (277-344)||(9607202-9607269)
chr3 (244-349)||(21796831-21796937)
chr3 (266-332)||(33926094-33926160)
chr3 (249-345)||(53996627-53996725)
chr3 (245-340)||(7942993-7943090)
chr3 (245-320)||(54032616-54032693)
chr3 (277-345)||(19731000-19731068)
chr3 (305-345)||(48667156-48667196)
chr3 (277-344)||(25944468-25944535)
chr3 (299-345)||(31542411-31542457)
chr3 (245-310)||(31592882-31592947)
chr3 (249-332)||(45139539-45139624)
chr3 (245-297)||(47624088-47624141)
chr3 (249-315)||(10795486-10795554)
chr3 (277-345)||(19751576-19751644)
[»] chr7 (57 HSPs)
chr7 (277-352)||(19426980-19427055)
chr7 (278-352)||(47077945-47078019)
chr7 (245-345)||(40463853-40463954)
chr7 (245-352)||(21172066-21172173)
chr7 (254-352)||(43557441-43557541)
chr7 (277-352)||(27629603-27629678)
chr7 (245-352)||(2541076-2541186)
chr7 (245-346)||(33871967-33872069)
chr7 (267-352)||(42495916-42496001)
chr7 (245-352)||(42798638-42798747)
chr7 (245-344)||(10693130-10693229)
chr7 (245-352)||(32758230-32758337)
chr7 (245-352)||(34626265-34626373)
chr7 (274-346)||(39123865-39123937)
chr7 (254-352)||(46354163-46354263)
chr7 (266-352)||(18327003-18327089)
chr7 (245-352)||(11617645-11617754)
chr7 (245-341)||(28078189-28078286)
chr7 (277-346)||(42805499-42805568)
chr7 (277-353)||(22699061-22699137)
chr7 (288-352)||(35334916-35334980)
chr7 (277-345)||(29907393-29907463)
chr7 (245-339)||(42391157-42391251)
chr7 (245-346)||(42476848-42476949)
chr7 (279-344)||(7193062-7193127)
chr7 (245-345)||(19265791-19265892)
chr7 (245-352)||(48735179-48735287)
chr7 (277-345)||(3469270-3469338)
chr7 (245-344)||(6736867-6736967)
chr7 (277-345)||(16341254-16341322)
chr7 (277-345)||(28362236-28362304)
chr7 (277-352)||(7794597-7794672)
chr7 (268-353)||(5180238-5180324)
chr7 (248-317)||(15108457-15108527)
chr7 (245-322)||(31591166-31591243)
chr7 (254-342)||(47716438-47716528)
chr7 (245-345)||(48123541-48123643)
chr7 (277-346)||(7644931-7645000)
chr7 (278-346)||(13805077-13805145)
chr7 (277-352)||(1424001-1424076)
chr7 (256-346)||(22065563-22065654)
chr7 (277-320)||(38262287-38262330)
chr7 (245-345)||(23419731-23419833)
chr7 (277-327)||(35203433-35203483)
chr7 (275-345)||(44123710-44123780)
chr7 (245-320)||(7879639-7879716)
chr7 (277-345)||(14099097-14099165)
chr7 (277-345)||(14409114-14409182)
chr7 (292-352)||(14732928-14732988)
chr7 (266-322)||(32233214-32233270)
chr7 (240-298)||(38604550-38604609)
chr7 (245-342)||(11741774-11741871)
chr7 (245-322)||(18512510-18512588)
chr7 (277-322)||(8491918-8491963)
chr7 (277-322)||(8518727-8518772)
chr7 (267-345)||(12473280-12473359)
chr7 (277-345)||(42101976-42102044)
[»] scaffold0187 (2 HSPs)
scaffold0187 (248-353)||(10110-10215)
scaffold0187 (248-353)||(20438-20543)
[»] scaffold0168 (1 HSPs)
scaffold0168 (245-352)||(30548-30655)
[»] scaffold1176 (1 HSPs)
scaffold1176 (247-353)||(1646-1752)
[»] scaffold0258 (1 HSPs)
scaffold0258 (245-345)||(13081-13182)
[»] scaffold0223 (1 HSPs)
scaffold0223 (245-352)||(11101-11207)
[»] scaffold0057 (3 HSPs)
scaffold0057 (277-352)||(46800-46875)
scaffold0057 (245-352)||(24829-24933)
scaffold0057 (300-344)||(46997-47041)
[»] scaffold0254 (1 HSPs)
scaffold0254 (278-344)||(4134-4200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (277-351)||(58947-59021)
[»] scaffold0036 (1 HSPs)
scaffold0036 (245-351)||(35074-35184)
[»] scaffold0018 (1 HSPs)
scaffold0018 (244-352)||(72923-73027)
[»] scaffold0116 (1 HSPs)
scaffold0116 (274-346)||(8866-8938)
[»] scaffold0024 (1 HSPs)
scaffold0024 (293-344)||(83852-83903)
[»] scaffold0311 (1 HSPs)
scaffold0311 (277-351)||(10780-10854)
[»] scaffold0194 (1 HSPs)
scaffold0194 (292-350)||(24635-24693)


Alignment Details
Target: scaffold0031 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 9 - 352
Target Start/End: Complemental strand, 43441 - 43098
Alignment:
Q  9 tggataacttttaactttaacaaaccgtaccgcaaatatctgtccatactatgttatgacctgtccactatccataataagctatcgccttgacggtgca 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  43441 tggataacttttaactttaccaaaccgtaccgcaaatatctgtccatactatgttacgacctgtccactatccattataagctatcgccttgacggtgca 43342  T
Q  109 aaatagagtcaaagagggtgtctctcttttatttgattttagtttatctacaaatgaatgaaattaaagagtgtgtctctactatactaaattacttata 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43341 aaatagagtcaaagagggtgtctctcttttatttgattttagtttatctacaaatgaatgaaattaaagagtgtgtctctactatactaaattacttata 43242  T
Q  209 aaagcacaattcgatgtattgaagctcccgcgtcttaccatttgatgtattgtatgcgccttactctgtttttacacaagagactgtttctaggacttga 308  Q
    |||| |||||||| |||| ||||||| |||||||  ||||||||||||||||||   | ||||||||||||||||||||||| ||||||||||||| |||    
T  43241 aaaggacaattcggtgtactgaagctgccgcgtcccaccatttgatgtattgtaaatgtcttactctgtttttacacaagaggctgtttctaggacctga 43142  T
Q  309 actcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| |||||||||||| |||||||||| |||||    
T  43141 actcgtgacctttcaatcacatgacaataactttaccagttgcg 43098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 13160779 - 13160671
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  13160779 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaacttta 13160680  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  13160679 ccagttgcg 13160671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 2626563 - 2626488
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2626563 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcg 2626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 45071342 - 45071240
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| || |||||||| ||||||||| | ||||||||||||||||||||    
T  45071342 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaacttta 45071243  T
Q  344 cca 346  Q
    |||    
T  45071242 cca 45071240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 12670307 - 12670414
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12670307 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12670405  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  12670406 ccagttgcg 12670414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 17823621 - 17823545
Alignment:
Q  276 gtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  17823621 gtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcg 17823545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 28407471 - 28407385
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  28407471 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 28407385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 39461062 - 39461162
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||  || ||||||||||||||||||| ||||    
T  39461062 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgc 39461161  T
Q  352 g 352  Q
    |    
T  39461162 g 39461162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 36720874 - 36720771
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  36720874 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 36720775  T
Q  343 acca 346  Q
    ||||    
T  36720774 acca 36720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 18164840 - 18164914
Alignment:
Q  267 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  18164840 ccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 20869588 - 20869662
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 20869662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 30454187 - 30454261
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  30454187 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 30454261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 30962864 - 30962929
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  30962864 tttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 35261757 - 35261648
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||| |  ||||||||||||||||||    
T  35261757 accatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaacttt 35261658  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  35261657 accagttgcg 35261648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 349
Target Start/End: Complemental strand, 26954176 - 26954104
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaatt 349  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  26954176 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaatt 26954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 28817683 - 28817791
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||| | ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  28817683 accattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 28817782  T
Q  343 accaattgc 351  Q
    |||| ||||    
T  28817783 accagttgc 28817791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 20284164 - 20284232
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  20284164 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 21070793 - 21070861
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  21070793 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 29521742 - 29521851
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||| |  ||||| ||||||||||||    
T  29521742 accatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaacttt 29521841  T
Q  343 accaattgcg 352  Q
    | || |||||    
T  29521842 atcagttgcg 29521851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 7136619 - 7136695
Alignment:
Q  276 gtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||||  |||||| ||||||||||| | ||||||| |  |||||||||||||||||||||| |||||    
T  7136619 gtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcg 7136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 14018060 - 14018128
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||||||||||| | ||||||||| | ||||||||| ||||| |||||||||| |||||    
T  14018060 tttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 6760866 - 6760791
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||    ||| |||||||||||||||||| |||||    
T  6760866 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcg 6760791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 24245491 - 24245421
Alignment:
Q  280 ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||| ||||||| ||||| ||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  24245491 ttacataagagac-gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 24245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 24365151 - 24365218
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||   ||||||||||||||||||||    
T  24365151 tttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 25250566 - 25250497
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||| || ||||||| |||||||||||  |||||||| |  ||||||||||||||||||||||    
T  25250566 tttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttacca 25250497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 44530227 - 44530118
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| |||||||| |||||||||  |||||| | ||||||||| |||||||||    |||||||||| |||||||    
T  44530227 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaacttt 44530128  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  44530127 accagttgcg 44530118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 31457251 - 31457155
Alignment:
Q  244 taccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaac 339  Q
    ||||||||||||||||||| || |||||   || ||||||||||||||  |||||  ||||||||||| |||||||||||   ||||||||||||||    
T  31457251 taccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 42083790 - 42083858
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||| || ||||||| ||||||||||| |||||||||||  |||| ||||||||| ||||||    
T  42083790 tttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 44781585 - 44781665
Alignment:
Q  266 gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||| |||| |||||||||||||  |||||| ||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  44781585 gccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 44742580 - 44742678
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||| ||||||||| || ||||||| |||||||| ||||| |||| |||||| || |||||||||| ||||||| | |||||  |||||||||||||||    
T  44742580 tttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgacaacaactttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 8897855 - 8897924
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||||| |  |||||| ||||||| ||| ||||||||| |  ||||||||||||||||||||||    
T  8897855 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttacca 8897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 354
Target Start/End: Complemental strand, 12625968 - 12625856
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||||| |||||||||||| | ||||| ||||||||  |||||||||  |||||| ||||||||| | ||||||||     ||||| |||||||||||    
T  12625968 accatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactt 12625869  T
Q  342 taccaattgcgtg 354  Q
    ||||| |||||||    
T  12625868 taccagttgcgtg 12625856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 22598201 - 22598133
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||  |||  ||||||||||||||||    
T  22598201 tttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 23000276 - 23000365
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 335  Q
    |||||||| |||||||||||   ||||||  |||||||||||||||| ||||||| |||||||  || |||||||||||  |||||||||||    
T  23000276 accatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 35105966 - 35105902
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||   ||| |||||||||||||    
T  35105966 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 11748343 - 11748269
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    |||||||| ||||| ||||||| | ||||||||| |||||| ||||  |||||||||||||| || |||| ||||    
T  11748343 tttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgc 11748269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 11001069 - 11001109
Alignment:
Q  305 ttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||| || |||||||| ||||||||||||||||||||||    
T  11001069 ttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 26457759 - 26457691
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||| ||| ||| || ||| ||||| | ||||||||| |||||  |||||||||||||||    
T  26457759 tttttacacaagaaactctttttaagacctgaacccatgacctttcaatcacgcgacaacaactttacc 26457691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 40607839 - 40607891
Alignment:
Q  301 ggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    |||||||||||| |||| || |  | |||||||||||||||||||||||||||    
T  40607839 ggacttgaactcatgacattccagttacatgacaacaactttaccaattgcgt 40607891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 9161195 - 9161091
Alignment:
Q  250 ttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaat 348  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||  ||||||||||||||||||||| ||    
T  9161195 ttgatgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgat 9161096  T
Q  349 tgcgt 353  Q
    |||||    
T  9161095 tgcgt 9161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 1347040 - 1346933
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||| | ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  1347040 accatttggtgtattgtacgcagccttaccctgtttt-acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 1346942  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  1346941 ccagttgcg 1346933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 1354814 - 1354921
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  1354814 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaacttta 1354912  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  1354913 ccagttgcg 1354921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 6024277 - 6024201
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    |||||||||||||| |||||||||||| |||||  ||||||||| | ||||||||||||||||||||||| ||||||    
T  6024277 tttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttgcgt 6024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 12221983 - 12222083
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| | ||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  12221983 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 12222082  T
Q  352 g 352  Q
    |    
T  12222083 g 12222083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 3815168 - 3815243
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||| || ||||||| ||||||||||| |||||| ||||  |||||||||||||||||||||| |||||    
T  3815168 tttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 3815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 29355923 - 29356009
Alignment:
Q  254 tgtattgtatgc-gccttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 338  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  29355923 tgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 14975171 - 14975239
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| ||||||| ||||||||||  ||||||||| |  |||||||||||||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttacc 14975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 8409287 - 8409212
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| | ||||| ||||||||||  |||||||||||  |||||| ||||||||||||||| |||||    
T  8409287 tttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 20400711 - 20400636
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||| |||||| |  ||||||||  ||||||||||  |||||||||||||||| |||||||||||    
T  20400711 tttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcg 20400636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 24734677 - 24734602
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||  |||||| |||| |||||||  |||||||||  |||||||||||||||||||||| |||||    
T  24734677 tttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcg 24734602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 2166504 - 2166570
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  2166504 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 2178137 - 2178203
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  2178137 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 13905036 - 13905138
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| || ||||||||| ||||||| ||||||| ||||||||||   ||||  ||||||||| | |||||||||||  ||||||||||||||||||    
T  13905036 accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaacttt 13905135  T
Q  343 acc 345  Q
    |||    
T  13905136 acc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 8417504 - 8417442
Alignment:
Q  289 agactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    |||||||||| | ||| |||||||||||| ||||  |||||||||||||||||||||| ||||    
T  8417504 agactgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 12063511 - 12063445
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||| ||||||| || |||||||||||||||| |||||||||||  || ||||| ||||||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaacttta 12063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 14553555 - 14553482
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    |||||||||||||  || |||| |||||||||||  ||||||||| | |||||||||||||||||||||| ||||    
T  14553555 tttttacacaagaagctatttccaggacttgaacctgtgacctttag-tcacatgacaacaactttaccagttgc 14553482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 12889495 - 12889402
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttta-cacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||| ||||| | ||||||||| |||||||| ||||||  | |||||||||  ||||||||||  |||| ||||||||||||||||    
T  12889495 tgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 15866128 - 15866197
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||  ||||| ||||||| |||| |||||| | ||||||||| |||||||| ||||||||||||||    
T  15866128 tttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttacca 15866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 28007671 - 28007604
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcga--tcacatgacaacaacttta 343  Q
    ||||||||||||| || |||| ||||||||||| ||||||||||  |  |||||||||||||||||||    
T  28007671 ttttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaacaacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 24097625 - 24097556
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||| ||||||| ||| ||| ||||||| |||||||||||||||  | |||||||| ||| |||||||    
T  24097625 tttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttacca 24097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 33138911 - 33138838
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtga 316  Q
    |||||||| ||||||||| ||| ||||||||||||||| | |||||||  |||||| ||||||||||| |||||    
T  33138911 accatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 32068137 - 32068074
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||||||||||   ||||| | |||||||||  ||||||||||| |||| ||||||||||||||    
T  32068137 tttttacacaagag---gtttccaagacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 12023976 - 12024084
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12023976 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12024075  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  12024076 ccagttgcg 12024084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 25249795 - 25249903
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| |||||| |||||||||||||||||| | ||||||||| ||||||||| |  |||||||||||||||||||    
T  25249795 accatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaacttta 25249894  T
Q  344 ccaattgcg 352  Q
    |||||||||    
T  25249895 ccaattgcg 25249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 8455373 - 8455482
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  8455373 accatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 8455472  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  8455473 accagttgcg 8455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 17896303 - 17896227
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||    
T  17896303 tttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgt 17896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 11514514 - 11514405
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || |||||||| ||||||| ||||||||| ||||||| |||| |||||| ||||||||| |  ||||||||||||||||||    
T  11514514 accatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaacttt 11514415  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  11514414 accagttgcg 11514405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 351
Target Start/End: Original strand, 24200686 - 24200790
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||| ||||  ||||||||||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T
Q  347 attgc 351  Q
     ||||    
T  24200786 gttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 14530362 - 14530287
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  14530362 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 14530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 7214603 - 7214509
Alignment:
Q  254 tgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||| || ||||||| |||| ||||||||||||||||||||| | ||||||||| | |||||||||  ||||||||||||||||||||||    
T  7214603 tgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttacca 7214509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 45235910 - 45235976
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||    
T  45235910 ttttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 249 - 352
Target Start/End: Complemental strand, 10543772 - 10543667
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||| ||||||||| || ||||||| |||||||| ||||||||| | ||||| ||||||||||| |||||||||||  ||||||||||||||||||| ||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatca 10543673  T
Q  347 attgcg 352  Q
     |||||    
T  10543672 gttgcg 10543667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 23397809 - 23397736
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||||||| ||||||| ||||||||||| | |||||||||  |||||||||||||||||||||| ||||    
T  23397809 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 23397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 21377164 - 21377232
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  21377164 tttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 21779318 - 21779425
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| ||  |||||| ||||||| ||||||||| |||| || ||||||||||| |||||||||||  ||||||||||||||||| |    
T  21779318 accatttggtgtattgtacgcaaccttaccctgtttt-acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttca 21779416  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  21779417 ccagttgcg 21779425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 17623642 - 17623539
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||||||  |||||| ||||||||||| ||||||||| |  || |||||||||||||||    
T  17623642 accatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaacttt 17623543  T
Q  343 acca 346  Q
    ||||    
T  17623542 acca 17623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 17668080 - 17667977
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||||||  | |||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  17668080 accatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 17667981  T
Q  343 acca 346  Q
    ||||    
T  17667980 acca 17667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 22371132 - 22371032
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||  ||| ||||||| ||||||||||| ||||||||  |  |||||||||||||||||||    
T  22371132 accatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaacttta 22371035  T
Q  344 cca 346  Q
    |||    
T  22371034 cca 22371032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 25079809 - 25079884
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  25079809 tttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 25079884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 5841072 - 5841006
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  5841072 tttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 9671257 - 9671156
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcga-tcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||| |||||| |||||| |||| | ||||||||||||||||||    
T  9671257 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaacttt 9671159  T
Q  343 acc 345  Q
    |||    
T  9671158 acc 9671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 17380317 - 17380391
Alignment:
Q  267 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||| |||||| ||||||||||  |||||| | ||||||||| |||||||||||| |||||||||||||||||    
T  17380317 ccttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 351
Target Start/End: Complemental strand, 17705551 - 17705465
Alignment:
Q  266 gccttactctgtt-tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||| |||||||||    |||||||||||||||||||||| ||||    
T  17705551 gccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 19977805 - 19977874
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||| ||||| ||||||| || |||||||| |||||||||||| ||||||||||||||||| ||||    
T  19977805 tttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcacca 19977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 99361 - 99421
Alignment:
Q  284 acaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||| ||||||||||||||||||| |||||||||||  |||| |||||||||||||||    
T  99361 acaagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 27573698 - 27573590
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || |||||||  ||||| |||||||||| ||||| |  ||||||||||   |||||||||  |||||||||||||||||||    
T  27573698 accatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaacttta 27573599  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  27573598 ccagttgcg 27573590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 29419980 - 29420048
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||  |||  ||||||||||||||||    
T  29419980 tttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 44604907 - 44604832
Alignment:
Q  268 cttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||| |||||||||||||||||  |||||| |||||||||||  |||||||| |  |||||||||||||||||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 5450329 - 5450263
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||  |||||||||||||||||||    
T  5450329 tttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 14444784 - 14444730
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctt 320  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  14444784 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 4516442 - 4516510
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||  |||| ||||||||||||||||    
T  4516442 tttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 33795329 - 33795261
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||| ||||||  ||||||  |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  33795329 tttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 40416962 - 40417032
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaa 347  Q
    |||||| |||||||  |||||| | ||||||||| ||||||||| |  |||||||||||||||||||||||    
T  40416962 tttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttaccaa 40417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 39914397 - 39914466
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||||||  |||||| || |||||| | ||||||||| |  ||||||||||||||||||||||    
T  39914397 tttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttacca 39914466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 345
Target Start/End: Original strand, 44521431 - 44521532
Alignment:
Q  246 ccatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||| |||||| ||||| |||||||  |||||| ||||||||||| |||||| | || |||||| |||||||||||  |||| ||| ||||||||||    
T  44521431 ccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaacttta 44521530  T
Q  344 cc 345  Q
    ||    
T  44521531 cc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 26684712 - 26684788
Alignment:
Q  277 tttttacacaagaga-ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||  ||||||  ||||||| |||   ||||||||| ||||||||||||||||||||||| |||||    
T  26684712 tttttacacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcg 26684788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 4852305 - 4852364
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 336  Q
    ||||| |||||||||||||||  ||||||||||| | |||| ||||| ||||||||||||    
T  4852305 ttttttcacaagagactgtttgcaggacttgaacccctgacttttcggtcacatgacaac 4852364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 14544103 - 14544032
Alignment:
Q  281 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||| ||||||| || || || ||  || |||||||  ||||||||||||||||||||||||||||    
T  14544103 tacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcg 14544032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 25641554 - 25641487
Alignment:
Q  269 ttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 336  Q
    |||| ||||||| |||||| |  ||||||| ||||||||||| |||||||||||  ||||||||||||    
T  25641554 ttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 44643579 - 44643497
Alignment:
Q  266 gccttactctgtttttacac--aagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||||||||  ||  ||||| || ||||||| |||||||| |||||||||||  ||||||||  ||||||||||||    
T  44643579 gccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 17473015 - 17472949
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||||||| || || |||||| ||| ||||| ||||||||||| ||||  ||||||||||||||    
T  17473015 tttttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaacttta 17472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 23145755 - 23145857
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||| ||| ||||||||| || ||||||| ||||||| |||||||||| ||||||  | ||||||||| |||||||||||  ||||   |||||||||||    
T  23145755 accaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaacttt 23145854  T
Q  343 acc 345  Q
    |||    
T  23145855 acc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 23557545 - 23557647
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||| ||| ||||||||| || ||||||| ||||||| |||||||||| ||||||  | ||||||||| |||||||||||  ||||   |||||||||||    
T  23557545 accaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaacttt 23557644  T
Q  343 acc 345  Q
    |||    
T  23557645 acc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 10546241 - 10546161
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||||| ||||||||| || ||||||| ||||||||  | |||||||  |||||| ||||||||||| |||||||||||    
T  10546241 accatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttc 10546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 24860044 - 24860152
Alignment:
Q  244 taccatttgatgtattgtatgcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||||| ||||||||| ||  | |||  ||||||||||| ||||  |||||| ||| ||| ||| ||| ||||| |  |||||||||||||| ||||    
T  24860044 taccatttggtgtattgtacgcagcctaccatgtttttacaccagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaatttta 24860143  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  24860144 ccagttgcg 24860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 31821447 - 31821491
Alignment:
Q  292 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaac 336  Q
    ||||||||| |||||||||||||||||||||  |||||| |||||    
T  31821447 ctgtttctacgacttgaactcgtgacctttcagtcacataacaac 31821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 41014396 - 41014288
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||    
T  41014396 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 41014297  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  41014296 ccagttgcg 41014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 27328821 - 27328720
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  27328821 tgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgc 27328722  T
Q  352 gt 353  Q
    ||    
T  27328721 gt 27328720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 8170041 - 8170148
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||| || ||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  8170041 accatttggtgtattgtacgcagccttaccctgtttt-acacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 8170139  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  8170140 ccagttgcg 8170148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 37024646 - 37024719
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 37024719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 22907922 - 22908014
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 336  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||| | |||||||||  |||||| |||||    
T  22907922 accatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 38879650 - 38879550
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  38879650 tgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 38879551  T
Q  352 g 352  Q
    |    
T  38879550 g 38879550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 43334246 - 43334171
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  43334246 tttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 43334171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 2838856 - 2838754
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgaccttt-cgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||  ||||||||  ||||||| |||||||||||| |  ||||||||||||||||||    
T  2838856 accatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaacttt 2838757  T
Q  343 acc 345  Q
    |||    
T  2838756 acc 2838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 35710356 - 35710282
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||||| |||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcg 35710282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 208989 - 209086
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||| ||||||| |||| ||||||| |||||||||||||||||  |||| | |||||||||||| |||||||||   |||||||||||||||||||||    
T  208989 tttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 22861758 - 22861823
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||  |||||||||||||||||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 24448968 - 24448859
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| || ||||| |||||| || ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  24448968 accatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 24448869  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  24448868 accagttgcg 24448859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 4619172 - 4619272
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| ||||||| |||||||||| || |||| ||||||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  4619172 tgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 4619271  T
Q  352 g 352  Q
    |    
T  4619272 g 4619272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 351
Target Start/End: Complemental strand, 31299705 - 31299602
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaa 347  Q
    |||||||||||||| || |  |||| ||||||| | ||||||| |||||||||||||||||||| ||||||| |   ||||||||||||||||||||||     
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccag 31299606  T
Q  348 ttgc 351  Q
    ||||    
T  31299605 ttgc 31299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 334
Target Start/End: Complemental strand, 32703500 - 32703411
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgaca 334  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||    
T  32703500 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 337
Target Start/End: Complemental strand, 1850717 - 1850624
Alignment:
Q  245 accatttgatgtattgtatgcgcc-ttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 337  Q
    |||||||||||||||||| || || ||| ||||||||||||||||||  | ||||  |||||||||| |||||||||||  |||||||||||||    
T  1850717 accatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 23974824 - 23974756
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||| |  |||||||||||||||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 34074653 - 34074717
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||  |||  ||||||||||||    
T  34074653 tttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 1565475 - 1565400
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||| ||||||  |||||| ||||||||||| || ||||||||  |||||||||||||||||||||| |||||    
T  1565475 tttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcg 1565400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 22187329 - 22187262
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||| ||||||| ||||||| |||  ||||||||||  ||| ||||||||||||||||    
T  22187329 tttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttac 22187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 28516525 - 28516593
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  |||||| | ||||||||| |||||||||||   ||| ||||||||||||||||    
T  28516525 tttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 22600532 - 22600429
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| |||||||||  | ||||||| |||| |||||||||| | | |||||| ||||||||||| ||| ||||| |  |||||||| |||||||||    
T  22600532 accatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaacttt 22600433  T
Q  343 acca 346  Q
    ||||    
T  22600432 acca 22600429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 39079882 - 39079925
Alignment:
Q  302 gacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||| |||||||||||  |||||||||||||||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 39301178 - 39301099
Alignment:
Q  267 ccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||| ||||||| ||||||||||  |||| | | ||||||||| |||||||||||  | |||||||||||||||||||    
T  39301178 ccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 43574684 - 43574609
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacc 318  Q
    |||||||| | ||||||| || ||||||| ||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  43574684 accatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 9794473 - 9794511
Alignment:
Q  300 aggacttgaactcgtgacctttcgatcacatgacaacaa 338  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  9794473 aggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 17419943 - 17419889
Alignment:
Q  292 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||| ||||||||||||||| |||||||  |||||| ||||||| |||||||    
T  17419943 ctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttacca 17419889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 19143000 - 19143066
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 310  Q
    |||||||| |||| |||| || ||||||| |||||||||||||||||  |||||| |||||||||||    
T  19143000 accatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 22025587 - 22025542
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||||||||||| ||||||| ||||||||||| | |||||||||    
T  22025587 tttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  305 ttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 10634253 - 10634301
Alignment:
Q  293 tgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||||||||||||||| | |||||||||  |||| ||||||||||||    
T  10634253 tgtttctaggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 5648336 - 5648228
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||    
T  5648336 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaacttta 5648237  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  5648236 ccagttgcg 5648228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 6430683 - 6430791
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| | ||||||||| |||||||||||  |||||||||||||||||||    
T  6430683 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaacttta 6430782  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  6430783 ccagttgcg 6430791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 14590916 - 14590806
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    ||||||||||||||||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  14590916 accatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactt 14590817  T
Q  342 taccaattgcg 352  Q
    ||||| |||||    
T  14590816 taccagttgcg 14590806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 30639462 - 30639349
Alignment:
Q  240 gtcttaccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 338  Q
    |||| |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| |||||||||||  ||||||||||  ||||| ||||||||    
T  30639462 gtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaa 30639363  T
Q  339 ctttaccaattgcg 352  Q
    |||||||| |||||    
T  30639362 ctttaccagttgcg 30639349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 48598882 - 48598989
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  48598882 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 48598980  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  48598981 ccagttgcg 48598989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 54730293 - 54730218
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||    
T  54730293 tttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcg 54730218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 5306721 - 5306829
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| ||  |||||| ||| ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||| ||||||||    
T  5306721 accatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaacttta 5306820  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  5306821 ccagttgcg 5306829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 246 - 352
Target Start/End: Original strand, 11054206 - 11054312
Alignment:
Q  246 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||| ||||||||| || | ||||| ||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||||||||||||||||||||    
T  11054206 ccatttggtgtattgtacgcagtcttaccctgtttt-acacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttac 11054304  T
Q  345 caattgcg 352  Q
    || |||||    
T  11054305 cagttgcg 11054312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 47528587 - 47528693
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  47528587 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 47528685  T
Q  344 ccaattgc 351  Q
    ||| ||||    
T  47528686 ccagttgc 47528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 40915906 - 40915804
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || |||||||  |||||||||||||||| ||||||| ||||||||||| |||||||||    |||||||||||||||||||    
T  40915906 accatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaacttta 40915807  T
Q  344 cca 346  Q
    |||    
T  40915806 cca 40915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 16911631 - 16911531
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||||||||   |||||||||||||||||||||| ||||    
T  16911631 tgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgc 16911532  T
Q  352 g 352  Q
    |    
T  16911531 g 16911531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 20225060 - 20224953
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||||||  |||||| ||||||||||| | |||||||||  |||||||||||||||||||    
T  20225060 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaacttta 20224962  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  20224961 ccagttgcg 20224953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 16408694 - 16408769
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  16408694 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 16408769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 39077886 - 39077948
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 340  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  39077886 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 44363223 - 44363292
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||| ||| ||||||  |||||||||||||||||||||||  ||||||||||||||||||||||    
T  44363223 tttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacca 44363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 353
Target Start/End: Original strand, 55830803 - 55830888
Alignment:
Q  269 ttactctgtttttacacaagagactgtttctaggacttgaactc-gtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    |||| ||||||  ||||||||||||||||| |  |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  55830803 ttaccctgtttacacacaagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgt 55830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 17315378 - 17315457
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||  ||||||||||||||||  |||||| |||| |||||| |||||||||||  |||||||||||||||||||||    
T  17315378 gccttaccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttacc 17315457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 21647008 - 21646933
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| |||||||||||  |||||||| |  |||||||||||||||||||||| |||||    
T  21647008 tttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcg 21646933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 30352682 - 30352757
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||  ||| |||||||||||| |||| ||||||||||||||||| |||||    
T  30352682 tttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcg 30352757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 42164228 - 42164307
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||| |||||||||||||||||  |||||| | ||||||||| |||||||||||  |||||||||||||| ||||||    
T  42164228 gccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 17043451 - 17043549
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| |||||||||||  ||||||||||  |||| ||||||||||||    
T  17043451 accatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 47441587 - 47441689
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| |||||||||  | ||||||| ||| |||||||| |||||||||||||| ||||||||||  ||||||||||  |||| |||||||||||||    
T  47441587 accatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaacttt 47441686  T
Q  343 acc 345  Q
    |||    
T  47441687 acc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 30496380 - 30496476
Alignment:
Q  246 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    ||||||| |||||||||||| ||||||| | || |||||||||||| ||||||| | ||||||||| |||||||||||  |||| |||||||||||||    
T  30496380 ccatttggtgtattgtatgcagccttaccc-gtgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 32478865 - 32478942
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    ||||||| |||||||||||| ||||  |||||| |||||||||||  ||||||| ||| |||||||||||||||||||    
T  32478865 gccttaccctgtttttacactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 8473679 - 8473786
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| |||||||||||| ||||||| |||||   ||||||||| ||||||| ||||||||||| ||  ||||| || ||| |||||||||||||||    
T  8473679 accatttggtgtattgtatgcagccttaccctgttaa-acacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaacttta 8473777  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  8473778 ccagttgcg 8473786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  281 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||  |||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 47444035 - 47443927
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctt----tcgatcacatgacaacaa 338  Q
    |||||||| ||||||||| || ||||||| |||||||| || |||||| ||||||| ||||||||||| |||||||||    ||| |||||||| |||||    
T  47444035 accatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaa 47443936  T
Q  339 ctttaccaa 347  Q
    |||||||||    
T  47443935 ctttaccaa 47443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 49938671 - 49938746
Alignment:
Q  267 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||  ||||||||||  |||| |||||||||||||    
T  49938671 ccttaccccgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 23580299 - 23580365
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||||||||| || ||||||| |||||||| |||||||||||  |||| ||||||||||||||    
T  23580299 tttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 54175137 - 54175043
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttttacacaagagactg-tttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||| ||||||||| || ||||||| ||||||||||||||||| ||| |||| ||||||||||  |||||| ||||  |||||||||||||||||    
T  54175137 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 14983878 - 14983809
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||||||| ||||||| | ||||||||  ||||||||| | |||| ||||||||||||||||||    
T  14983878 tttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttacca 14983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 55766532 - 55766633
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactc-gtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| ||||||  |||||||| |||||||| |  |||||||| | |||||||| || |||||||||||||||||||||| ||||    
T  55766532 tgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgc 55766631  T
Q  352 gt 353  Q
    ||    
T  55766632 gt 55766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 487230 - 487294
Alignment:
Q  281 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||  |||||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 37494929 - 37494821
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| | ||||||||||  |||||| |||||||| |||||||||  |||||| |||||||||||  ||||||||||  || |||| ||||||||||    
T  37494929 accatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaacttt 37494830  T
Q  343 accaattgc 351  Q
    |||| ||||    
T  37494829 accagttgc 37494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 9832370 - 9832468
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||  ||||||||||| |||||||||||  ||| || ||||||| ||||    
T  9832370 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 10660448 - 10660373
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||| |||||  |||||| |||||||||||  || |||||||  |||||||||||||||||||||| |||||    
T  10660448 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcg 10660373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 10874593 - 10874518
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||| |||||  |||||| |||||||||||  || |||||||  |||||||||||||||||||||| |||||    
T  10874593 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcg 10874518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 19027926 - 19027823
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||| ||| ||||||||| || ||||||| |||||||| ||||||||   |||||| ||||||||||| |||||||||||  |||| ||||||||||| |    
T  19027926 accaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactct 19027827  T
Q  343 acca 346  Q
    ||||    
T  19027826 acca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 346
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||| ||||||||| || ||||||| |||||||| |||||||||||| |||| || ||||||||  ||||||| ||  |||| |||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 50856344 - 50856395
Alignment:
Q  294 gtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||||| ||||||||||| ||||  ||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttacc 50856395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 5313108 - 5313154
Alignment:
Q  300 aggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||    
T  5313108 aggaattgaacccgtgacctttcaatcacatgacaacaactttacca 5313154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 23501812 - 23501762
Alignment:
Q  302 gacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 23501762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 25463166 - 25463108
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 335  Q
    ||||||||||||||  |||||| ||||||||||| |||||||||||  |||||||||||    
T  25463166 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 30690274 - 30690340
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||||||||| || |||| ||||||||||| |||||||||||  |||| ||||||| ||||||    
T  30690274 tttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 336
Target Start/End: Original strand, 32629348 - 32629418
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 336  Q
    ||||||| ||||||||  ||||||| ||||||| |||| |||||| |||||||||||  ||||||||||||    
T  32629348 gccttaccctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 7385567 - 7385628
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 338  Q
    |||||||||| ||| ||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  7385567 tttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  280 ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||  ||||||  |||||||||| |||||||||||  |||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 35567214 - 35567146
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||| | ||||||| | ||||||||| | |||||||||  | |||||||||||||||||||    
T  35567214 tttttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 41018885 - 41018945
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 338  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||| |||||||||    
T  41018885 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 54640430 - 54640498
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| ||||||| | ||||||||| |||||||||||   ||| ||||||||| ||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 54967065 - 54966997
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  | |||| || ||||||||  ||||||||||  |||||||||||||||||||||    
T  54967065 tttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 7909338 - 7909397
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctagga 303  Q
    |||||||| ||||||||| ||  |||||| ||||||||||||||||||||||||| ||||    
T  7909338 accatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 44357274 - 44357195
Alignment:
Q  268 cttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||| ||| |||||||| ||  |||||||||||||||||||| |||||||||  | |||| |||| ||||||||||    
T  44357274 cttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctttcagttacataacaataactttacca 44357195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 3580952 - 3580994
Alignment:
Q  302 gacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||||| ||||  ||||||||||||||||||||    
T  3580952 gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 29207955 - 29208032
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| |  |||| ||||||||||| |||||||||||    
T  29207955 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggcaatttccaggacttgaacccgtgacctttc 29208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 32632614 - 32632722
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  ||| |||||||||||||||    
T  32632614 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaacttta 32632713  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  32632714 ccagttgcg 32632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 34725155 - 34725262
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||  ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  34725155 accatttagtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 34725253  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  34725254 ccagttgcg 34725262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 344
Target Start/End: Original strand, 38478339 - 38478438
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||| ||||    
T  38478339 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagttta 38478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 47214610 - 47214503
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| ||  |||||| ||||||| | ||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  47214610 accatttggtgtattgtacgcaaccttaccctgttttaa-acaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 47214512  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  47214511 ccagttgcg 47214503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 14617103 - 14617037
Alignment:
Q  279 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  14617103 tttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 14617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 22930148 - 22930233
Alignment:
Q  267 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||| |||||||||||||| || ||||||| ||||||||||| | |||||||||  |||||||||||||||||||||| |||||    
T  22930148 ccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 22930233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 41319865 - 41319966
Alignment:
Q  247 catttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||| ||||||||| || ||||||| ||||||| |||||||||||||||||| ||||||| |||  ||||||||||  ||||||||||||||||||||    
T  41319865 catttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttac 41319964  T
Q  345 ca 346  Q
    ||    
T  41319965 ca 41319966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 18724636 - 18724704
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  18724636 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 27474351 - 27474279
Alignment:
Q  274 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||||||||||||||||| | |||||||||  ||||||||||  ||||||||||||||||||||||    
T  27474351 ctgtttttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacca 27474279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 45812594 - 45812701
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| |||||||||||| ||||||| || |||| ||||||||||||||||  |||||||||||  ||||||||||  |||||||||||||||||||    
T  45812594 accatttggtgtattgtatgcagccttaccctctttt-acacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 45812692  T
Q  344 ccaattgcg 352  Q
     || |||||    
T  45812693 tcagttgcg 45812701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 23768377 - 23768487
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| | |||||||||  |||||||| |  ||||||||||||||||||    
T  23768377 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaacttt 23768476  T
Q  343 accaattgcgt 353  Q
    |||| ||||||    
T  23768477 accagttgcgt 23768487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 45402164 - 45402087
Alignment:
Q  274 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| ||| ||| ||||||||||||||||||||||| |||||    
T  45402164 ctgtttttacacaagaggctgtttccaggacttgaacccgttacc-ttccatcacatgacaacaactttaccagttgcg 45402087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 11596613 - 11596512
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| |||||| || || ||||||| |||||||||||||||||  |||||||||||||||||| |||||| ||||  |||||||||| | ||||||    
T  11596613 accatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagccacttta 11596514  T
Q  344 cc 345  Q
    ||    
T  11596513 cc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 19414538 - 19414434
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||  ||||||| ||| ||||| || |||||||||||||||| |||||||||||  ||| |||||||||||||||    
T  19414538 accatttggtgtattgtacgcagccttaacctgtttt-acataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaacttta 19414440  T
Q  344 ccaatt 349  Q
    ||||||    
T  19414439 ccaatt 19414434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 344
Target Start/End: Original strand, 25468320 - 25468421
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| ||  |||||| ||| ||||||||||||||  |||||| ||||||||||| | ||||||||| |||||||||||||||||||    
T  25468320 accatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaacttt 25468419  T
Q  343 ac 344  Q
    ||    
T  25468420 ac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 18944735 - 18944635
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||| |||||||  ||||||||||  |||||||||||||||||||||| ||||    
T  18944735 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 18944636  T
Q  352 g 352  Q
    |    
T  18944635 g 18944635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 30395794 - 30395894
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||||||    |||||||||||||||||||||| ||||    
T  30395794 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgc 30395893  T
Q  352 g 352  Q
    |    
T  30395894 g 30395894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 20036285 - 20036218
Alignment:
Q  279 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20036285 tttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 346
Target Start/End: Complemental strand, 27201744 - 27201645
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||| ||||||||| || ||||||| |||||| | ||||||||| ||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 34714678 - 34714615
Alignment:
Q  289 agactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  34714678 agactgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcg 34714615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 46248010 - 46248113
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || | ||||| ||||||| |||||||||| ||||||| | ||||||||| |||||| ||||  ||||||||||||||||||    
T  46248010 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaacttt 46248109  T
Q  343 acca 346  Q
    ||||    
T  46248110 acca 46248113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||| ||||||||| || ||||||| ||||||| |||||||||| ||||||||||||||||||| | ||||| |||  |||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 20004183 - 20004257
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| |||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  20004183 tttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 20004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 46991871 - 46991797
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  46991871 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 46991797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 6925167 - 6925098
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||||||| || |||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  6925167 tttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 6925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 10668292 - 10668212
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttc-----gatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||      ||||||||||||||||||||||| |||||    
T  10668292 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcg 10668212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 35117847 - 35117927
Alignment:
Q  266 gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||| |||| ||||||||||||| || |||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  35117847 gccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 33223054 - 33222983
Alignment:
Q  274 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||||| ||||||| | ||||| ||  |||||||||||  |||||||||||||||||||||    
T  33223054 ctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttacc 33222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 9939521 - 9939463
Alignment:
Q  284 acaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||  |||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 344
Target Start/End: Original strand, 12126897 - 12126993
Alignment:
Q  248 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||| ||||||||| || ||||||| ||||||| ||||||||  ||||||| || |||| ||| ||||||||||| || ||||||||||||||||||    
T  12126897 atttggtgtattgtacgcagccttaccctgtttt-acacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttac 12126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 22327166 - 22327101
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    ||||||||||||||  |||||| ||||||||||| || ||||||||  ||||||||||||||||||    
T  22327166 tttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 344
Target Start/End: Original strand, 44485166 - 44485267
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || |||||||  ||| ||||||||||| |  |||||| ||||||  ||| ||||||||||| |||||||||||||||||||    
T  44485166 accatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatcacatgacaacaacttt 44485265  T
Q  343 ac 344  Q
    ||    
T  44485266 ac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 2435878 - 2435946
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2435878 ttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 2435984 - 2436052
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||| |||  |||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 4430083 - 4430186
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || | ||||| ||||||| ||||||||| |||||||  | ||||| ||| ||||||||| |  ||||||||||||||||||    
T  4430083 accatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaacttt 4430182  T
Q  343 acca 346  Q
    ||||    
T  4430183 acca 4430186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 18335379 - 18335454
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||| ||||||||||||||| ||||||| |||| ||||||||||   |||||||||| ||||||| || |||||    
T  18335379 tttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaaaaactttatcacttgcg 18335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 25290232 - 25290162
Alignment:
Q  277 tttttacacaagagactgt--ttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| ||||  ||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  25290232 tttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacc 25290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 8197110 - 8197036
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    |||||||||||||| |  || | ||||||||||| |||||||||||  ||||||||||||||||| |||| ||||    
T  8197110 tttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgc 8197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 22324989 - 22324927
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 310  Q
    |||| |||||||||||| ||||||| ||||||||||||||||| ||||||| | |||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 35253244 - 35253321
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| ||||| |||||    
T  35253244 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttcgaggacttgaacccgtgatctttc 35253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 27136743 - 27136811
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||  |||| | || ||||||||||||| |||| | ||||| ||||||||||||||||    
T  27136743 tttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacgtgacaacaactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 40424786 - 40424734
Alignment:
Q  300 aggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| |||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcg 40424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 50760321 - 50760385
Alignment:
Q  281 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||| ||||||  ||||||||||| |||||||| ||  |||||||||||| ||||||||    
T  50760321 tacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 35005220 - 35005145
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| ||||||  | ||||||||| |||||||||||    
T  35005220 tttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttc 35005145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 6983915 - 6983969
Alignment:
Q  292 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||| |||||||||||  ||||||||||  |||| |||||||||||||||||    
T  6983915 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 31272432 - 31272510
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    ||||||||||||  |||| || |||||||  ||||||||||||||||  |||||| |||||||||||  ||||||||||    
T  31272432 accatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaacctgtgacctttc 31272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 19932869 - 19932918
Alignment:
Q  303 acttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||| | |||||||||  |||||||||||||||||||||| |||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 19932918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 23371191 - 23371146
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    ||||||| |||| | ||||||||||||||||||| |||||||||||    
T  23371191 tttttacccaagtggctgtttctaggacttgaacccgtgacctttc 23371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 18742051 - 18742127
Alignment:
Q  277 tttttacacaagagactgtttct-aggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||| |||| ||||||||||  | || |||||| | |||||||||  |||||||||||||||||||||| |||||    
T  18742051 tttttatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcg 18742127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 50812006 - 50811938
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||  ||||||| ||||| |||   |||||||||||  |||| ||||||||||||||||    
T  50812006 tttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 52910284 - 52910216
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||  ||||| ||||||| | || ||||||  ||||||||||  |||||||||||||||||||||    
T  52910284 tttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 226462 - 226572
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    ||||||||||||||||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  226462 accatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactt 226561  T
Q  342 taccaattgcg 352  Q
    ||||| |||||    
T  226562 taccagttgcg 226572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 10870031 - 10870117
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  10870031 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 10870117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 12914087 - 12914201
Alignment:
Q  240 gtcttaccatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 337  Q
    |||| |||||||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  12914087 gtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaaca 12914186  T
Q  338 actttaccaattgcg 352  Q
    ||||||||| |||||    
T  12914187 actttaccagttgcg 12914201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 26869806 - 26869698
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| |||||||||||| |||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  26869806 accatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 26869707  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  26869706 ccagttgcg 26869698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 352
Target Start/End: Original strand, 7696945 - 7697051
Alignment:
Q  246 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||| ||||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||   ||||||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttac 7697043  T
Q  345 caattgcg 352  Q
    || |||||    
T  7697044 cagttgcg 7697051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 8247780 - 8247855
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  8247780 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 8247855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 22122974 - 22123075
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||| ||||    
T  22122974 accatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaattta 22123072  T
Q  344 cca 346  Q
    |||    
T  22123073 cca 22123075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 22609865 - 22609764
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| | ||||||||| ||| ||||| |  |||||||||||||||||||    
T  22609865 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaacttta 22609766  T
Q  344 cc 345  Q
    ||    
T  22609765 cc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 16735540 - 16735432
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||||  ||||||| ||||||| ||||||||||| |||||| || |  |||||||||||||||||||    
T  16735540 accatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaacttta 16735441  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  16735440 ccagttgcg 16735432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 26782432 - 26782356
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||| ||| |||||||| |||||||||||||||||    
T  26782432 tttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcgt 26782356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 46421103 - 46421203
Alignment:
Q  254 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||||   |||||||||||||||||||||| ||||    
T  46421103 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgc 46421202  T
Q  352 g 352  Q
    |    
T  46421203 g 46421203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 1217187 - 1217081
Alignment:
Q  246 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  | ||||||| ||||||||||    
T  1217187 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttac 1217089  T
Q  345 caattgcg 352  Q
    || |||||    
T  1217088 cagttgcg 1217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 5173801 - 5173876
Alignment:
Q  267 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    ||||||| ||||||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  5173801 ccttactttgtttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 13730695 - 13730770
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  13730695 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 13730770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 13628858 - 13628948
Alignment:
Q  254 tgtattgtatgc-gccttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  13628858 tgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 40272869 - 40272978
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||||  |||||| ||||||||||| | ||||||| |  ||||||||||||||||||    
T  40272869 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaacttt 40272968  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  40272969 accagttgcg 40272978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 39203614 - 39203515
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| ||  |||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  39203614 accatttggtgtattgtacgcaaccttaccctgtttt-acacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaacttta 39203516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 6411881 - 6411988
Alignment:
Q  247 catttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||| ||||||||| || ||||||| ||||||||||||||||| ||||||  | ||||||||| | |||||| ||  | |||||||||||||||||||    
T  6411881 catttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttacc 6411980  T
Q  346 aattgcgt 353  Q
    | ||||||    
T  6411981 agttgcgt 6411988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 34420735 - 34420802
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||||    
T  34420735 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 52926305 - 52926376
Alignment:
Q  281 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  52926305 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 52926376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 26573227 - 26573125
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||| ||| ||||||||| || ||||||| |||||||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||    
T  26573227 accaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttt 26573128  T
Q  343 acc 345  Q
    |||    
T  26573127 acc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 29366788 - 29366882
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||||   ||||||||||||||||||||||    
T  29366788 tgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 29366882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 4495721 - 4495830
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||| || || |||  ||||||||||| ||||||||| |  ||||||||||||||||||    
T  4495721 accatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaacttt 4495820  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  4495821 accagttgcg 4495830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 30928238 - 30928302
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||| |||||    
T  30928238 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 35417982 - 35417914
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 45620920 - 45620988
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| ||||||| || |||||||| |||||||||||  |||| ||||||||||||||||    
T  45620920 tttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 53062104 - 53062036
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  53062104 ttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 516475 - 516417
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 335  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||    
T  516475 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 9607269 - 9607202
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||| |||||| ||||||| |||||||||||   |||||||||  ||||||||||||||||||||    
T  9607269 tttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 21796831 - 21796937
Alignment:
Q  244 taccatttgatgtattgtat-gcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    ||||||||||||| |||||  | | ||||| || ||||||||||||||||||||| ||| | ||||||  |||||| |||  |||  |||||||||||||    
T  21796831 taccatttgatgttttgtacagagtcttaccctatttttacacaagagactgtttatagtatttgaacatgtgaccattccctcatgtgacaacaacttt 21796930  T
Q  343 accaatt 349  Q
    |||||||    
T  21796931 accaatt 21796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 33926160 - 33926094
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatga 332  Q
    ||||||| ||||||||||||||||| || |||| ||||||||||| | |||||||||  ||||||||    
T  33926160 gccttaccctgtttttacacaagaggctatttccaggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 53996627 - 53996725
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||| ||||||||| || ||||||| ||||||| ||||||||||  |||||| | ||||||||| |||||||||||  ||| |||||||||| ||||||    
T  53996627 tttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 340
Target Start/End: Complemental strand, 7943090 - 7942993
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 340  Q
    |||||||||||||||||| || | ||||| |||||||| | ||||||  ||||||| ||||||||||  ||||||||| |  ||||||||||||||||    
T  7943090 accatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 54032616 - 54032693
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctt 320  Q
    |||||| | |||||||||||| ||||||| ||||||| ||||||||||  |||||| ||||||||||| |||||||||    
T  54032616 accattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 19731068 - 19731000
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||| ||||| ||||||||| ||||||    
T  19731068 tttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 48667196 - 48667156
Alignment:
Q  305 ttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  48667196 ttgaactcgtgacctttccatcacatcacaacaactttacc 48667156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 25944535 - 25944468
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||||| |||| | ||||| ||||||||||| | |||||||||  |||| |||||||||||||||    
T  25944535 tttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 31542457 - 31542411
Alignment:
Q  299 taggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  31542457 taggatttgaattcgtgacctttcaatcatatgacaacaactttacc 31542411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 31592947 - 31592882
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 310  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  31592947 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 332
Target Start/End: Original strand, 45139539 - 45139624
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatga 332  Q
    |||| |||||||||||| ||||||| |||| |||||||||||||  |||||| |  |||||||| |||||||||||  ||||||||    
T  45139539 tttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 47624141 - 47624088
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgttt 297  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||    
T  47624141 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  249 tttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtg 315  Q
    |||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 19751644 - 19751576
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||| ||||| |||||| || ||||||    
T  19751644 tttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 19426980 - 19427055
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  19426980 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcg 19427055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 47077945 - 47078019
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  47077945 ttttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 47078019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 40463954 - 40463853
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| |||||| || || ||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||| |  |||||||||||||||||||    
T  40463954 accatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaacttta 40463855  T
Q  344 cc 345  Q
    ||    
T  40463854 cc 40463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 21172066 - 21172173
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||    
T  21172066 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaacttta 21172164  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  21172165 ccagttgcg 21172173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 43557541 - 43557441
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||||| | |||||||||  |||||||||||||||||||||| ||||    
T  43557541 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 43557442  T
Q  352 g 352  Q
    |    
T  43557441 g 43557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 27629678 - 27629603
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| |||||    
T  27629678 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcg 27629603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 2541076 - 2541186
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcga-tcacatgacaacaactt 341  Q
    |||||||| ||||| ||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||||| | |||||||||||||||||    
T  2541076 accatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactt 2541175  T
Q  342 taccaattgcg 352  Q
    ||||| |||||    
T  2541176 taccagttgcg 2541186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 33871967 - 33872069
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||  |||||||||||||||||  |||||| ||||||||||| || ||||||||  |||||||||||||||||||    
T  33871967 accatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttta 33872066  T
Q  344 cca 346  Q
    |||    
T  33872067 cca 33872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 42495916 - 42496001
Alignment:
Q  267 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||| |||||||||||  ||| |||||||||||||||||| |||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcg 42496001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 42798747 - 42798638
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||||| |  ||||||||||||||||||    
T  42798747 accatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaacttt 42798648  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  42798647 accagttgcg 42798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 344
Target Start/End: Original strand, 10693130 - 10693229
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| || |||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  10693130 accatttggtgtattgtacgcagccttaccctctttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10693228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 32758337 - 32758230
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| |||||||||  | ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  32758337 accatttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 32758239  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  32758238 ccagttgcg 32758230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 34626265 - 34626373
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||| | || ||||||| ||||||||||||| ||| ||||||| ||||||||||   ||| |||||| ||||||||||||||||||||    
T  34626265 accatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaacttta 34626364  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  34626365 ccagttgcg 34626373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 39123937 - 39123865
Alignment:
Q  274 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | ||||  ||||||||||||||||||||||    
T  39123937 ctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 46354263 - 46354163
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||| || ||||||| |||||||| |||||||||  |||||| ||||||||||| ||||||||| | ||||||||||||||||||||||| ||||    
T  46354263 tgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccagttgc 46354164  T
Q  352 g 352  Q
    |    
T  46354163 g 46354163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 18327089 - 18327003
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||| |||||||||    |||||||||||||||||||||| |||||    
T  18327089 gccttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcg 18327003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 11617645 - 11617754
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || | ||||| ||||||| ||||||||||  |||||| |||||||||||  ||||||||||  ||||||||||||||||||    
T  11617645 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttt 11617744  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  11617745 accagttgcg 11617754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 28078189 - 28078286
Alignment:
Q  245 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 341  Q
    |||||||| ||||||| ||||  |||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||    
T  28078189 accatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 42805568 - 42805499
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  42805568 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 42805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 353
Target Start/End: Original strand, 22699061 - 22699137
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    ||||||||||||||||| |||| ||||||||||| | | |||||||  |||||||||||||||||||||| ||||||    
T  22699061 tttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgt 22699137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 35334916 - 35334980
Alignment:
Q  288 gagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||| |||||    
T  35334916 gagactgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcg 35334980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 29907463 - 29907393
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatg--acaacaactttacc 345  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||  |||||||  ||||||||||||||    
T  29907463 tttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 339
Target Start/End: Original strand, 42391157 - 42391251
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaac 339  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||  ||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  42391157 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 42476949 - 42476848
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || |||||||  |||||| ||||||||||||||||| || |||||||  ||||||||||   |||||||||||||||||||    
T  42476949 accatttggtgtattgtacgcagccttaccttgtttt-acacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaacttta 42476851  T
Q  344 cca 346  Q
    |||    
T  42476850 cca 42476848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 7193127 - 7193062
Alignment:
Q  279 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 19265892 - 19265791
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||||||| || |||||||||||| | |||| || | ||||||||| |||||||||||  |||| ||||||||||||||    
T  19265892 accatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaacttta 19265793  T
Q  344 cc 345  Q
    ||    
T  19265792 cc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 48735179 - 48735287
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttcta-ggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || |||||||  |||||| |||||||||  |||||| | |||||||||| |||||||||||  ||||||||||||||||||    
T  48735179 accatttggtgtattgtacgcagccttaccgtgtttt-acacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaacttt 48735277  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  48735278 accagttgcg 48735287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 3469270 - 3469338
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||||||| ||||||||||||||||    ||||||||||  |||||||||||||||||||||    
T  3469270 tttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 6736967 - 6736867
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| |||||||||||| | |||||  |||||||| |||||||  |||||  ||||||||||| |||||||||||  || ||||||||||||||||    
T  6736967 accatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaacttta 6736868  T
Q  344 c 344  Q
    |    
T  6736867 c 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 16341322 - 16341254
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||| |  |||||| ||||||||||||    
T  16341322 tttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 28362236 - 28362304
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||| | |||||||||||||||||  ||||||||||   ||||||||||||||||||||    
T  28362236 tttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 7794597 - 7794672
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||| |  |||||| ||||||||||||||| |||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcg 7794672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 353
Target Start/End: Original strand, 5180238 - 5180324
Alignment:
Q  268 cttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 353  Q
    ||||| |||||||| ||||||||| ||||||| || | |||||| | |||||||||  |||||||||||||||||||||| ||||||    
T  5180238 cttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgt 5180324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 15108457 - 15108527
Alignment:
Q  248 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgac 317  Q
    |||||||||||||||  | |||||||  ||||||||||||||| |||||||| ||||||||||||||||||    
T  15108457 atttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 31591166 - 31591243
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||||  ||||||||| || ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||    
T  31591166 accatttattgtattgtacgcagccttactctgtttt-acacaagaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 47716528 - 47716438
Alignment:
Q  254 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| |  ||||||| ||||||||||    
T  47716528 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 48123541 - 48123643
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtt-tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| |||||||||||| |  |||| ||||| |||||||||||| ||||||| ||||||||||| | |||||||||   ||||||| |||||||||    
T  48123541 accatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaacttt 48123640  T
Q  343 acc 345  Q
    |||    
T  48123641 acc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 7645000 - 7644931
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||| | ||||||| |||||||    
T  7645000 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 346
Target Start/End: Complemental strand, 13805145 - 13805077
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||| |||| || |||| ||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  13805145 ttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 1424001 - 1424076
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||| |||||||||| |||| |||||  ||||||||| |  |||||| ||||||||||||||| |||||    
T  1424001 tttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcg 1424076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 22065654 - 22065563
Alignment:
Q  256 tattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    |||||||||| || |||| || ||||||||||||||  |||||| |  |||||||||| |||| |||| ||||| |||||||||||||||||    
T  22065654 tattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 320
Target Start/End: Original strand, 38262287 - 38262330
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctt 320  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  38262287 tttttacacaagagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 23419731 - 23419833
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || | ||||| ||||||| |||||||||| ||||||| || ||||||||  |||||||||   |||||||||| |||||||    
T  23419731 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaacttt 23419830  T
Q  343 acc 345  Q
    |||    
T  23419831 acc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 35203483 - 35203433
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatca 327  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  35203483 tttttacacaagagaatgtttccaggacttgaacccgtgacctttcaatca 35203433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 44123710 - 44123780
Alignment:
Q  275 tgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||||||||||| ||||||| || |||||||| ||| | |||||  |||||||||| ||||||||||    
T  44123710 tgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 7879716 - 7879639
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctt 320  Q
    |||||||| ||||||||| || |||||||  ||||||| |||||||||| |||||| ||||||||||| |||||||||    
T  7879716 accatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 14099097 - 14099165
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||| || || |||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  14099097 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 14409114 - 14409182
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    ||||||||||| || || |||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  14409114 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 14732928 - 14732988
Alignment:
Q  292 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||| ||||||||||| | |||| ||||  |||||||||||||||||||||| |||||    
T  14732928 ctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcg 14732988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 32233214 - 32233270
Alignment:
Q  266 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    ||||||| |||||||||||||||||  |||||| ||||||||||| | |||||||||    
T  32233214 gccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacctttc 32233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 38604609 - 38604550
Alignment:
Q  240 gtcttaccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttc 298  Q
    |||| |||||||| ||||||||| || ||||||| ||||||||||||||||| |||||||    
T  38604609 gtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 38604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 342
Target Start/End: Complemental strand, 11741871 - 11741774
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||||||||| || ||||||| || |||| |||| |||  ||||||  ||||||||||| | |||||||||  ||||||||||||||||||    
T  11741871 accatttggtgtattgtacgcagccttaccctatttt-acactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 18512510 - 18512588
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||| | ||||||||| || ||||||| || |||||||||||||   |||||| ||||||||||| |||||||||||    
T  18512510 accattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 8491963 - 8491918
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  8491963 tttttaaacaagagactgtttttaagacttgaacttgtgacctttc 8491918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 8518772 - 8518727
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 322  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  8518772 tttttaaacaagagactgtttttaagacttgaacttgtgacctttc 8518727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 12473359 - 12473280
Alignment:
Q  267 ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttc-gatcacatgacaacaactttacc 345  Q
    |||||| |||||||| |||||||||  |||||  ||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  12473359 ccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagat-acatgacaacaactttacc 12473280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 42101976 - 42102044
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||||  ||||| ||||||| ||||||||||||  ||||||| |  |||| ||||||||||||||||    
T  42101976 tttttacggaagaggctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 10110 - 10215
Alignment:
Q  248 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||| ||||||||| || | ||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  10110 atttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 10208  T
Q  347 attgcgt 353  Q
     ||||||    
T  10209 gttgcgt 10215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 20438 - 20543
Alignment:
Q  248 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||| ||||||||| || | ||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20438 atttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20536  T
Q  347 attgcgt 353  Q
     ||||||    
T  20537 gttgcgt 20543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 30655 - 30548
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || ||| ||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  30655 accatttggtgtattgtacgcagccctaccctgtttt-acacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 30557  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  30556 ccagttgcg 30548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 1646 - 1752
Alignment:
Q  247 catttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 345  Q
    |||||| |||||||||||| ||||||  ||||||| |||||||||  |||||  ||||||||||| | |||||||||  |||||||||||||||||||||    
T  1646 catttggtgtattgtatgcagccttatcctgtttt-acacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T
Q  346 aattgcgt 353  Q
    ||||||||    
T  1745 aattgcgt 1752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 13081 - 13182
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||| | ||||||||| || |||||||  ||||||||| |||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  13081 accattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 13180  T
Q  344 cc 345  Q
    ||    
T  13181 cc 13182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 11207 - 11101
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 343  Q
    |||||||| ||||||||| || |||||||| |||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||| | ||||||||||    
T  11207 accatttggtgtattgtaagcagccttactttgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaacttta 11110  T
Q  344 ccaattgcg 352  Q
    ||| |||||    
T  11109 ccagttgcg 11101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 46875 - 46800
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 352  Q
    ||||||||||||||  |||||| || |||||||| |||||||||    ||||||||||||||||||||||||||||    
T  46875 tttttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcg 46800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 24829 - 24933
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 342  Q
    |||||||| ||| ||||| || ||||||| |||||||| ||||||||| |||||     ||||||||| | |||||||||  ||||||||||||||||||    
T  24829 accatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaacttt 24923  T
Q  343 accaattgcg 352  Q
    |||| |||||    
T  24924 accagttgcg 24933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 46997 - 47041
Alignment:
Q  300 aggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  46997 aggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 4200 - 4134
Alignment:
Q  278 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  4200 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 59021 - 58947
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  ||||||||||| || ||||||| ||||    
T  59021 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgc 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 35074 - 35184
Alignment:
Q  245 accatttgatgtattgtatgc-gccttactctgtttttacac--aagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa-caact 340  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||  ||||||||||||  ||||||||||| ||||||||| |  |||||||||||  ||||    
T  35074 accatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaataaact 35173  T
Q  341 ttaccaattgc 351  Q
    |||||| ||||    
T  35174 ttaccagttgc 35184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 72923 - 73027
Alignment:
Q  244 taccatttgatgtattgtatgc-gccttactctgttttt-acacaagagact-gtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 340  Q
    ||||||||| ||||||||| || |||||||  ||||||| |||||||||||| ||||||||||||||||| ||||||        |||||||||||||||    
T  72923 taccatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac-------acacatgacaacaact 73015  T
Q  341 ttaccaattgcg 352  Q
    |||||| |||||    
T  73016 ttaccagttgcg 73027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 8938 - 8866
Alignment:
Q  274 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 346  Q
    ||||||||||||||||   |||||| |||| ||||||  |||||||| |  ||||||||||||||||||||||    
T  8938 ctgtttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacca 8866  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 83903 - 83852
Alignment:
Q  293 tgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 344  Q
    |||||| | ||||||||| |||||||||||  ||||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttac 83852  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 10854 - 10780
Alignment:
Q  277 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 351  Q
    ||||||||||||||  |||||  ||  ||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  10854 tttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 10780  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 24693 - 24635
Alignment:
Q  292 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattg 350  Q
    ||||||| ||||||||||| ||||||||| |  |||| |||||||||||||| ||||||    
T  24693 ctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattg 24635  T

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