View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1350_high_15 (Length: 455)
Name: NF1350_high_15
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 16 - 426
Target Start/End: Complemental strand, 37968068 - 37967658
Alignment:
| Q |
16 |
atcataaacaggttaacttgcctactagcataagaaatggtttctctggctagagaatgtgcagccatatttgtttatctcctaataaactttaccccaa |
115 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |
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| T |
37968068 |
atcataaacaggttaacttgcctactagcataagaaatggtttctctggctagagaatgagcagtcatatttgtttatctcctaataaactttacctcaa |
37967969 |
T |
|
| Q |
116 |
agttgcaatttaaagctagcatacatctaacataagcaaccagaacacaattcagaaacacctcctctgctagcatgaatggcaccagctaaaacttgta |
215 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37967968 |
agttgcaatttaaagctagcttacatctaacataagcaaccagaatacaattcagaaacacctcctctgctagcatgaatggcaccagctaaaacttgta |
37967869 |
T |
|
| Q |
216 |
aatcagtatggaaagtcactctatgaattcccatctcttgtatcgatcgcatagcattcaacaatgcagcagttacacccttcctgtacttgcattacag |
315 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37967868 |
aatcagtatggaaagtcactctatgaattcccatctcttgtatcgatcgcatagcattcaacaatgcagcagttacacccttcctgtacttgcattacag |
37967769 |
T |
|
| Q |
316 |
atggataccaacccgtgggcgccttgacaaattggcctgctctatttcgtaaacagcacccgtatcctgccatgcccctcttacgataaaaactagcatc |
415 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
37967768 |
atggataccaacccgtgggcgccttgacaaattggcctgctctatttcgtaaacagcacccgtatcctgccatgcccctattacgataaaaactagcatc |
37967669 |
T |
|
| Q |
416 |
aatgtcatatt |
426 |
Q |
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||||||||||| |
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| T |
37967668 |
aatgtcatatt |
37967658 |
T |
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