View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1350_high_28 (Length: 308)
Name: NF1350_high_28
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 15050783 - 15051045
Alignment:
| Q |
1 |
ctcatcctcagcaagtctattcaacatgaagaatacaaatcctcctctcaaannnnnnncaaattaaagtatcacaagaaatcttttgcaacaatcttct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
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| T |
15050783 |
ctcatcctcagcaagtctattcaacatgaagaatacaaatcctcctctcgaatttttttcaaattaaagtatcacaagaaatcttttgcaacaatcttct |
15050882 |
T |
|
| Q |
101 |
tcagatcacttacaacaaattaagatcgacatcccccttttactcttcattagacaaggtcacatcgacacttttcatccatgtgtcctccgcccaagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15050883 |
tcagatcacttacaacaaattaagatcgacatcccccttttactcttcattagacaaggtcacatcgacacttttcatccatgtgtcctccgcccaagta |
15050982 |
T |
|
| Q |
201 |
aatctaatgttcggagtagcaaaaagttaatttataaagttaaaatccatttcaaaaatgatg |
263 |
Q |
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||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
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| T |
15050983 |
aatataatgttcggagtagcaaaaaggtaatttataaagttaaaacccatttcaaaaatgatg |
15051045 |
T |
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