View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1350_high_40 (Length: 243)
Name: NF1350_high_40
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350_high_40 |
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Alignment Details
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 4523230 - 4523134
Alignment:
| Q |
137 |
aagaaatctataaactgataatggctatttgtaactaaaaaa-caactggaatagtcatccattctttgccgtaaaagacaaaagccctgtgttcat |
232 |
Q |
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| T |
4523230 |
aagaaatctataaactgataatggctatttgtaaccaaaaaaacaactggaatagtcatccattctttgccgtaaaagacaaaagccctgtgttcat |
4523134 |
T |
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