View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1350_low_26 (Length: 435)
Name: NF1350_low_26
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350_low_26 |
 |  |
|
| [»] scaffold1384 (1 HSPs) |
 |  |  |
|
| [»] scaffold0050 (1 HSPs) |
 |  |  |
|
| [»] scaffold0063 (1 HSPs) |
 |  |  |
|
| [»] scaffold1613 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 146; Significance: 9e-77; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 58 - 259
Target Start/End: Original strand, 39420718 - 39420919
Alignment:
| Q |
58 |
gaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacaccaccaaaatacacg |
157 |
Q |
| |
|
|||||||| |||| |||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39420718 |
gaaattaggaatataaataaaaggtgtcgtatataggcggaacacccgaaaatgaacaccataaaaaacactcatgagcataacaccaccaaaatacacg |
39420817 |
T |
 |
| Q |
158 |
tcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaagaccctac |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| || |
|
|
| T |
39420818 |
tcaccatctaaaactgactcctacacgagaacaaccaccgtataaacgatatccaacaccacccgtcgtcactactcacacccaaagaaaaagacccaac |
39420917 |
T |
 |
| Q |
258 |
ac |
259 |
Q |
| |
|
|| |
|
|
| T |
39420918 |
ac |
39420919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 41117677 - 41117806
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaaaactgactcctacac |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| ||||| ||||| || |||| ||||||||||||| |||||| ||| ||| ||||| | ||| |
|
|
| T |
41117677 |
cgtatataggcggaacacccgaaaataaacaccctaaataacac-catgaggacaacacccaccaaaatacatatcaccacctagaacagactcatgcac |
41117775 |
T |
 |
| Q |
184 |
gagaacaaccactatataaacgatatccaac |
214 |
Q |
| |
|
|| ||||||| | || |||||||||||||| |
|
|
| T |
41117776 |
gaaaacaaccgttgtaaaaacgatatccaac |
41117806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 49747917 - 49747769
Alignment:
| Q |
68 |
atacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatct |
166 |
Q |
| |
|
||||||| ||||| | |||||||| ||||||||||| ||||||||||||||||||||||| ||| || |||| |||||||||| || ||||||| || |
|
|
| T |
49747917 |
atacaaacaaaagacatcgtatatatgcggaacatccaaaaataaacaccataaaaaacacctctgaggacaacacccaccaaaattcatgtcaccacct |
49747818 |
T |
 |
| Q |
167 |
aaaactgactcctacacgagaacaaccactatataaacgatatccaacac |
216 |
Q |
| |
|
||||| ||||| | ||||| ||| |||| | || |||||| ||||||||| |
|
|
| T |
49747817 |
aaaacagactctttcacgaaaacgaccattgtaaaaacga-atccaacac |
49747769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 25754265 - 25754208
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
25754265 |
aatacaaataaaaagcgccgtatatagacggaacatctgaaaataaacaccataaaaa |
25754208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 249
Target Start/End: Original strand, 16832711 - 16832892
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacaccaccaaaatacacgtcaccatct |
166 |
Q |
| |
|
|||||||| |||||||| | |||||||||||||| | |||||||||||| | |||||| ||| ||| || |||||| | ||||| ||||||||| || |
|
|
| T |
16832711 |
aatacaaacaaaaggcgctgcatataggcggaacaccaaaaaataaacaccct-aaaaactctcctgaggacaacacccaccaaataaacgtcaccacct |
16832809 |
T |
 |
| Q |
167 |
aaaactgactcctacacg-agaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
||||| | |||| |||| | ||| ||| || || ||| |||||||||||| | | ||||||||||||||| |||||||||||| |
|
|
| T |
16832810 |
aaaacatattcctgcacgaaaaacgaccgctgtaaaaaagatatccaacaccacccgtcgtcactactcac-cccaaagaaaaa |
16832892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 19311075 - 19311205
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacacc-accaaaatacacgtcaccatctaaaactgactcctacac |
183 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||| |||||| | | | || ||||||||| ||||||||||||||||||| | |||| || |||| ||| |
|
|
| T |
19311075 |
cgtaaataggcggaacatccgaaattaaacaccctaaaaa-ctcccctggggataacacccaccaaaatacacgtcaccaccataaacagattccttcac |
19311173 |
T |
 |
| Q |
184 |
gagaacaaccactatataaacgatatccaaca |
215 |
Q |
| |
|
|| ||| | |||| || ||||||||||||||| |
|
|
| T |
19311174 |
gaaaacgagcactgtaaaaacgatatccaaca |
19311205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 48098641 - 48098544
Alignment:
| Q |
149 |
aaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaa |
248 |
Q |
| |
|
||||||||||||||| ||||||| |||| | ||| | ||| |||||| || |||||||||||| ||| | | ||||||||||||||| ||||||||||| |
|
|
| T |
48098641 |
aaatacacgtcaccacctaaaac--actctttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcgtcactactcacccccaaagaaaa |
48098544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 22810928 - 22811032
Alignment:
| Q |
143 |
ccaccaaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaa |
242 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| || ||||| | | |||||| || ||||||||||| || ||| |||||||||||||| ||||| |
|
|
| T |
22810928 |
ccaccaaaatacacgtcacctcctaaaacagactgcttcacgaaaccgaccactgtaaaaacgatatcc--taccatccatcgtcactactcacccccaa |
22811025 |
T |
 |
| Q |
243 |
agaaaaa |
249 |
Q |
| |
|
||||||| |
|
|
| T |
22811026 |
agaaaaa |
22811032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 46487670 - 46487615
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaa |
122 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
46487670 |
aatacaaactaaaggcatcgtatataggcggaacatccgaaaataaacacaataaa |
46487615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 38636927 - 38637072
Alignment:
| Q |
69 |
tacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatcta |
167 |
Q |
| |
|
|||||| || ||||| ||||| ||||||||||| | ||||||||||||| |||| || || | || || |||| |||| |||||||| ||||||| ||| |
|
|
| T |
38636927 |
tacaaacaagaggcgccgtat-taggcggaacacctgaaaataaacaccttaaataaaacccccgaggacaacacccacgaaaatacatgtcaccaccta |
38637025 |
T |
 |
| Q |
168 |
aaactgactcctacacgagaacaaccactatataaacgatatccaac |
214 |
Q |
| |
|
|||| |||||| ||||| ||||||| || || ||| |||||||||| |
|
|
| T |
38637026 |
aaacaaactccttcacgaaaacaaccgctgtaaaaatgatatccaac |
38637072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 35336958 - 35336914
Alignment:
| Q |
69 |
tacaaataaaaggcgacgtatataggcggaacatccgaaaataaa |
113 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
35336958 |
tacaaacaaaaggcgccgtatatagacggaacatccgaaaataaa |
35336914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 28967265 - 28967206
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaac |
126 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
28967265 |
aatacaaacgaaaggcgctgtatataggcggaacacctgaaaataaacaccctaaaaaac |
28967206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 48098697 - 48098646
Alignment:
| Q |
66 |
aaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacacc |
117 |
Q |
| |
|
||||||||| ||||| || |||||||||||||||| ||||||||||||||| |
|
|
| T |
48098697 |
aaatacaaacaaaagacgcagtatataggcggaacacccgaaaataaacacc |
48098646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 41231445 - 41231489
Alignment:
| Q |
79 |
aggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
||||| ||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
41231445 |
aggcgccgtatatagacggaacatcc-aaaataaacaccataaaaa |
41231489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 53823146 - 53823207
Alignment:
| Q |
100 |
catccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtca |
160 |
Q |
| |
|
|||| ||||||||||||| ||||||| || | ||| ||||||| |||||||||||||||||| |
|
|
| T |
53823146 |
catctgaaaataaacaccctaaaaaatacccctgaggataacacccaccaaaatacacgtca |
53823207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 19432426 - 19432386
Alignment:
| Q |
69 |
tacaaataaaaggcgacgtatataggcggaacatccgaaaa |
109 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
19432426 |
tacaaacaaaaggcgccgtatatagacggaacatccgaaaa |
19432386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 19673349 - 19673309
Alignment:
| Q |
206 |
atatccaacactatctgtcgtcactactcacacccaaagaa |
246 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
19673349 |
atatccaacaccatccgtcgtcactactcacccccaaagaa |
19673309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 81; Significance: 6e-38; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 6582968 - 6583068
Alignment:
| Q |
93 |
ggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaaaactgactcctacacgagaacaa |
191 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
6582968 |
ggcggaacacccgaaaataaacaccataaaaaacactcatgatgataacacccaccaaaatacacgtcaccacctaaaacagactcctacacgagaacaa |
6583067 |
T |
 |
| Q |
192 |
c |
192 |
Q |
| |
|
| |
|
|
| T |
6583068 |
c |
6583068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 34775262 - 34775092
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacacc-accaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||| || |||| || |||||| |||||||||||||||| || | |
|
|
| T |
34775262 |
aatacaaactaaaggcgccgtatataggcggaacacccgaaaataaacaccttaaaaaataccaatgaggacaacacccaccaaaatacacgtcatcacc |
34775163 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcac |
236 |
Q |
| |
|
|||||| ||||||| ||||| ||| || ||| || |||||| |||| |||||| | ||||||||||||||| |
|
|
| T |
34775162 |
taaaacagactccttcacgaaaacgacaactgtaaaaacgaaatcccacactacccgtcgtcactactcac |
34775092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 32882758 - 32882587
Alignment:
| Q |
66 |
aaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccat |
164 |
Q |
| |
|
||||||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||| |||| | || || |||| ||||||||||| || ||||| |
|
|
| T |
32882758 |
aaatacaaactaaaggcgccgtatataggcagaacacccgaaaataaacaccctaaaagacacccccgaggacaacacccaccaaaatatacatcaccgc |
32882659 |
T |
 |
| Q |
165 |
ctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcac |
236 |
Q |
| |
|
||||||||||||||| ||||| ||| | |||| || | |||||||||||||| | | |||||||||||||| |
|
|
| T |
32882658 |
ctaaaactgactccttcacgaaaacgagcactgtaaacacgatatccaacaccacccatcgtcactactcac |
32882587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 11439711 - 11439898
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||||||||| ||||||| ||||||||||||||||||||||| | |||| | | ||| || |||| ||||||||||||||||||||| | |
|
|
| T |
11439711 |
aatacaaacaaaaggcgacatatatagacggaacatccgaaaataaacaccct--aaaatccccctgaagacaacatccaccaaaatacacgtcaccacc |
11439808 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactact-cacacccaaagaaaaagaccc |
254 |
Q |
| |
|
|||||| || ||| ||||| | ||||||| || ||| |||||||||||| | | ||||||||||| ||| |||||||||||| |||| |
|
|
| T |
11439809 |
taaaacagatcccttcacgaaagcaaccaccgtaaaaatgatatccaacaccacttatcgtcactactccacccccaaagaaaaacaccc |
11439898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 249
Target Start/End: Complemental strand, 46768566 - 46768391
Alignment:
| Q |
68 |
atacaaataaaaggcgac-gtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
||||||| |||||||| | |||| ||||||||||| ||||||||||||||| |||||||||| | || || |||| |||||||||| |||||||||| | |
|
|
| T |
46768566 |
atacaaacaaaaggcgcccgtatgtaggcggaacacccgaaaataaacaccctaaaaaacacccccgaggacaacacccaccaaaattcacgtcaccacc |
46768467 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
|||||| ||||||| ||||| ||| ||||| |||||||||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
46768466 |
taaaacagactccttcacgaaaacgaccac--------cgatatccaacactgcccatcgtcactactcacccccaaagaaaaa |
46768391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 32863255 - 32863365
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaaaactgactcctacac |
183 |
Q |
| |
|
||||||||||||||||| | |||||||||||||| |||||||| || || || |||| ||||||| |||||||||||| ||||||| || |||| ||| |
|
|
| T |
32863255 |
cgtatataggcggaacacctgaaaataaacaccaagaaaaacacccaagaggacaacacccaccaacatacacgtcaccgcctaaaacagaatcctccac |
32863354 |
T |
 |
| Q |
184 |
gagaacaacca |
194 |
Q |
| |
|
|| ||| |||| |
|
|
| T |
32863355 |
gaaaacgacca |
32863365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 38546892 - 38546934
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaaca |
127 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
38546892 |
cgtatataggcggaacatccgaaaataaaaaccataaaaaaca |
38546934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 9313031 - 9313088
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
9313031 |
aatacaatcaaaaggcgtcgtatataggcggaacacccgaaaataaacaccctaaaaa |
9313088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 27102572 - 27102515
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
27102572 |
aatacaaacaaaaggtgccgtatataggcggaacacccgaaaataaacaccctaaaaa |
27102515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 2987824 - 2987874
Alignment:
| Q |
78 |
aaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacac |
128 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
2987824 |
aaggcgccgtatataggcggaacatccgaaaacaaacaccaacaaaaacac |
2987874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 42374573 - 42374519
Alignment:
| Q |
68 |
atacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaa |
122 |
Q |
| |
|
||||||| ||| |||| | ||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
42374573 |
atacaaacaaagggcgccatatataggcggaacacccgaaaataaacatcataaa |
42374519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 16149155 - 16149110
Alignment:
| Q |
78 |
aaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
16149155 |
aaggcgccgtatataggcggaacacgcgaaaataaacaccctaaaa |
16149110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 37200514 - 37200485
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37200514 |
cgtatataggcggaacatccgaaaataaac |
37200485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 18844971 - 18845019
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaaca |
115 |
Q |
| |
|
|||||||| |||||||| ||| ||||| ||||| ||||||||||||||| |
|
|
| T |
18844971 |
aatacaaacaaaaggcgtcgtgtatagacggaatatccgaaaataaaca |
18845019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 19599041 - 19598981
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaa-taaacaccataaaaaac |
126 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| | ||||| |||||||||| |||||| |
|
|
| T |
19599041 |
aatacaataaaaaggcgccgtatataggcggaacacctgaaaagtaaacaccatgaaaaac |
19598981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 38544407 - 38544463
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
|||||||| |||| || |||||||| | |||||| ||||||||||||||||||||| |
|
|
| T |
38544407 |
aatacaaactaaagacgtcgtatatatgtggaacacccgaaaataaacaccataaaa |
38544463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1384 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold1384
Description:
Target: scaffold1384; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 1351 - 1523
Alignment:
| Q |
76 |
aaaaggcgacgtatataggcggaacatccgaaaa-taaacaccataaaaaacactcatgatgataaca----ccaccaaaatacacgtcaccatctaaaa |
170 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||| | | | || |||| |||| |||||||||||||||| |||||| |
|
|
| T |
1351 |
aaaaggcgccgtatataggcagaacacccgaaaaataaacaccataaaaaacacccctaaggacaacaaaacccacaaaaatacacgtcaccacctaaaa |
1450 |
T |
 |
| Q |
171 |
ctgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaa |
243 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||| || |||||| |
|
|
| T |
1451 |
ctgactcctacacgagaacaaccactgtaaaaacgatatccaacaccacacgtcgtcactactgacccccaaa |
1523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 67 - 254
Target Start/End: Complemental strand, 37097 - 36912
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||| ||||||||||||||||| | |
|
|
| T |
37097 |
aatacaaacaaaagacgctgtatataggcggaacatccgaaaataaacaccataaaaaacacccatgaggaccacacccaacaaaatacacgtcaccacc |
36998 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaagaccc |
254 |
Q |
| |
|
|||||| ||||||| ||||| ||| |||||| || |||||| ||||| || ||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
36997 |
taaaacagactccttcacga-aaccaccactgtaaaaacgacatcca--accatccaccgtcactactcacccccaaagaaaaacaccc |
36912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 254
Target Start/End: Original strand, 8862314 - 8862502
Alignment:
| Q |
69 |
tacaaataaaaggcgacgtatataggcggaacatccgaaaa-taaacaccataaaaaacactcatgatgataacacc-accaaaatacacgtcaccatct |
166 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | | || |||||| || |||||||||||||||| || |
|
|
| T |
8862314 |
tacaaacaaaaggcgccgtatatagacggaacatccgaaaaataaacaccataaaaaacaccccgaaggacaacacccacaaaaatacacgtcaccacct |
8862413 |
T |
 |
| Q |
167 |
aaaactgactcctacacgagaacaaccactatataaacgatatcc-aacactatctgtcgtcactactcacacccaaagaaaaagaccc |
254 |
Q |
| |
|
||||||||||| |||||||||||||||| | || |||| |||||| ||||| | |||||||||||| || |||||||||||| |||| |
|
|
| T |
8862414 |
aaaactgactcttacacgagaacaaccattgtaaaaacaatatccaaacaccacacgtcgtcactactgactcccaaagaaaaacaccc |
8862502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 249
Target Start/End: Original strand, 12197766 - 12197948
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacaccaccaaaatacacgtcaccatct |
166 |
Q |
| |
|
|||||||| ||||||| ||| ||||||||||||| ||||||||||||| ||||| |||| || || |||||||| |||||||||||||||| || |
|
|
| T |
12197766 |
aatacaaactaaaggcgtcgtctataggcggaacacgggaaaataaacaccctaaaagacacctctggggacaacaccacaaaaatacacgtcaccacct |
12197865 |
T |
 |
| Q |
167 |
aaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
| ||| ||| ||| || || || ||||||| | |||||||||||| ||| | | ||||||||||||||| |||||||||||| |
|
|
| T |
12197866 |
acaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaaagaaaaa |
12197948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 249
Target Start/End: Original strand, 12442194 - 12442376
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacaccaccaaaatacacgtcaccatct |
166 |
Q |
| |
|
|||||||| ||||||| ||| ||||||||||||| ||||||||||||| ||||| |||| || || |||||||| |||||||||||||||| || |
|
|
| T |
12442194 |
aatacaaactaaaggcgtcgtctataggcggaacacgggaaaataaacaccctaaaagacacctctggggacaacaccacaaaaatacacgtcaccacct |
12442293 |
T |
 |
| Q |
167 |
aaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
| ||| ||| ||| || || || ||||||| | |||||||||||| ||| | | ||||||||||||||| |||||||||||| |
|
|
| T |
12442294 |
acaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaaagaaaaa |
12442376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 17656415 - 17656577
Alignment:
| Q |
55 |
ggtgaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacacc-accaaaata |
153 |
Q |
| |
|
||||||||| | ||| ||| |||||||| ||||||||| ||||||| |||||||| |||||| |||||| ||| | ||| || |||||| |||||||| |
|
|
| T |
17656415 |
ggtgaaattgaacatataaacaaaaggcgtcgtatatagacggaacacccgaaaattaacaccctaaaaa-cacccttgaggacaacacccaccaaaatt |
17656513 |
T |
 |
| Q |
154 |
cacgtcaccatctaaaactgactcctacacg-agaacaaccactatataaacgatatccaacac |
216 |
Q |
| |
|
|||||||||||||||||| ||||||| || | | ||| |||||| | |||||||||||||||| |
|
|
| T |
17656514 |
cacgtcaccatctaaaacagactccttcaagaaaaacgaccactgcaaaaacgatatccaacac |
17656577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 10248266 - 10248427
Alignment:
| Q |
77 |
aaaggcgacgtatataggcggaacatccgaaaataaa-caccataaaaaacactcatgatgataacacca-ccaaaatacacgtcaccatctaaaactga |
174 |
Q |
| |
|
||||||| ||||||||||||||||| || |||| ||| |||| |||||||||| | ||| || |||||| |||||||||||||||||| ||||||| | |
|
|
| T |
10248266 |
aaaggcgtcgtatataggcggaacaccctaaaaaaaaacaccttaaaaaacacccttgaggacaacacccgccaaaatacacgtcaccacctaaaacaaa |
10248365 |
T |
 |
| Q |
175 |
ctcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcac |
236 |
Q |
| |
|
||||| ||||| ||| |||||| || |||||| |||| ||| | | |||||||||||||| |
|
|
| T |
10248366 |
ctccttcacgaaaacgaccactgtaaaaacgacatcccacaacacccatcgtcactactcac |
10248427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 43312410 - 43312511
Alignment:
| Q |
147 |
caaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaa |
246 |
Q |
| |
|
||||||||| ||||||| ||||| | ||||||||||| | ||| |||||| || ||||||||||| |||| || |||||||||||| | ||||| ||| |
|
|
| T |
43312410 |
caaaatacatgtcaccacctaaatcagactcctacacaaaaacgaccactgtaaaaacgatatcccacaccatacatcgtcactactcgcccccaacgaa |
43312509 |
T |
 |
| Q |
247 |
aa |
248 |
Q |
| |
|
|| |
|
|
| T |
43312510 |
aa |
43312511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 10552641 - 10552608
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacacca |
118 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
10552641 |
cgtatataggcggaacatccgaaaacaaacacca |
10552608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 30235825 - 30235858
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacacca |
118 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
30235825 |
cgtatataggcggaacatccgaaaacaaacacca |
30235858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 201
Target Start/End: Complemental strand, 30097723 - 30097588
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||| || ||||||||||||||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||| | |
|
|
| T |
30097723 |
aatacaaactaaagacgccgtatataggcggaacacccgaaaataaacaccctaaaaaacatccatgatgacaacacccaccaaaatacacgtcaccacc |
30097624 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatata |
201 |
Q |
| |
|
|||||| ||||||| ||||| ||||| |||| |||| |
|
|
| T |
30097623 |
taaaacagactccttcacgaaaacaagcactttata |
30097588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 254
Target Start/End: Original strand, 14302124 - 14302322
Alignment:
| Q |
56 |
gtgaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacacc-accaaaatac |
154 |
Q |
| |
|
|||||||| ||||| ||| || || || ||||||||| |||||| || |||||||| | | |||||| ||| | |||||| |||||| |||||||||| |
|
|
| T |
14302124 |
gtgaaattgaaaatataaacaagagacgccgtatatagaaggaacacccaaaaataaaaatcctaaaaa-cacccctgatgacaacacccaccaaaatac |
14302222 |
T |
 |
| Q |
155 |
acgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaagaccc |
254 |
Q |
| |
|
||||||||| ||||||| || |||| | ||| ||| |||| | || |||||||||||||||| | |||||||||||||||| |||||||||||| |||| |
|
|
| T |
14302223 |
acgtcaccacctaaaacagattccttcgcgaaaacgaccaatgtaaaaacgatatccaacaccacctgtcgtcactactcatccccaaagaaaaataccc |
14302322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 254
Target Start/End: Original strand, 26045655 - 26045841
Alignment:
| Q |
68 |
atacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatct |
166 |
Q |
| |
|
||||||| |||||||| ||||||||| |||||||||| |||||||||||| |||||||| | | ||| || |||| |||||||||| |||||||||| || |
|
|
| T |
26045655 |
atacaaacaaaaggcgccgtatatagacggaacatccaaaaataaacaccctaaaaaacgcccctgaggacaacacccaccaaaattcacgtcaccacct |
26045754 |
T |
 |
| Q |
167 |
aaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaagaccc |
254 |
Q |
| |
|
||||| |||| || || || || ||||| || |||||| ||||||||| | |||||||||||||| |||||||||||| |||| |
|
|
| T |
26045755 |
aaaacagacttcttcatgaaaatgaccacggtaaaaacgaaatccaacacctcccatcgtcactactcac-cccaaagaaaaacaccc |
26045841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 26405239 - 26405348
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataac-accaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||||||| ||||||||| ||||||| ||||||||||||||| | |||||||| | ||| || ||| |||||||||||||||||||||| | |
|
|
| T |
26405239 |
aatacaaacaaaaggcgtcgtatatagtcggaacacccgaaaataaacacc-ttaaaaacacccctgaggacaacaaccaccaaaatacacgtcaccacc |
26405337 |
T |
 |
| Q |
166 |
taaaactgact |
176 |
Q |
| |
|
|||||| |||| |
|
|
| T |
26405338 |
taaaacagact |
26405348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 33258568 - 33258637
Alignment:
| Q |
55 |
ggtgaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||| | | |||| |||||||||||||||||||||| |
|
|
| T |
33258568 |
ggtgaaattggaaatacaaataaaaggcgccgtatatatgtgaaacacccgaaaataaacaccataaaaa |
33258637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 7682943 - 7682840
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||| ||| |||| | |||| |||||||||||||| |||||| | |
|
|
| T |
7682943 |
aatacaaattaaaggcgtcgtatataggcggaacatccgaaaataagcacc-caaaaaatacttatgagaacaacacccaccaaaatacacatcaccacc |
7682845 |
T |
 |
| Q |
166 |
taaaa |
170 |
Q |
| |
|
||||| |
|
|
| T |
7682844 |
taaaa |
7682840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 7391743 - 7391869
Alignment:
| Q |
121 |
aaaaacactcatgatgataacaccaccaaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatc |
220 |
Q |
| |
|
|||||||| ||||| || ||||||| ||||||||| ||||||| |||||| ||| |||| |||| || |||||| || |||||| |||| ||| | |
|
|
| T |
7391743 |
aaaaacacccatgaggacaacaccatcaaaatacatgtcaccacctaaaattgattcctccacggaaaagaccactgtaaaaacgaaatcccgcacagcc |
7391842 |
T |
 |
| Q |
221 |
tgtcgtcactactcacacccaaagaaa |
247 |
Q |
| |
|
|||||||||||||||| |||||||||| |
|
|
| T |
7391843 |
tgtcgtcactactcacccccaaagaaa |
7391869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 5187355 - 5187220
Alignment:
| Q |
45 |
gagcagagat-ggtgaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca- |
142 |
Q |
| |
|
|||||||||| ||||||||| |||||||| |||||||| || |||||| | | || ||||||||||||||||| |||| ||||||||| ||||||| |
|
|
| T |
5187355 |
gagcagagatcggtgaaattgagaatacaaacaaaaggcgccgcatatagatgaagcacccgaaaataaacaccat-aaaagcactcatgaggataacat |
5187257 |
T |
 |
| Q |
143 |
ccaccaaaatacacgtcaccatctaaaactgactcct |
179 |
Q |
| |
|
||||| || ||||| |||||| ||||| | ||||||| |
|
|
| T |
5187256 |
ccacccaagtacacatcaccacctaaaccagactcct |
5187220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 7195014 - 7195118
Alignment:
| Q |
89 |
tataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacacc-accaaaatacacgtcaccatctaaaactgactcctacacgaga |
187 |
Q |
| |
|
|||| ||||||||||| |||||||||||| |||||| ||| || || |||||| ||||||||||||||||||| ||||||| ||||||| ||| | | |
|
|
| T |
7195014 |
tatatgcggaacatccaaaaataaacaccctaaaaa-caccgctgcggacaacacccaccaaaatacacgtcaccacctaaaacagactccttcacaaaa |
7195112 |
T |
 |
| Q |
188 |
acaacc |
193 |
Q |
| |
|
|||||| |
|
|
| T |
7195113 |
acaacc |
7195118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 8297860 - 8297757
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||| | ||||||| ||||| |||||| ||| | ||| ||||||| |||||||||||||| |||||| | |
|
|
| T |
8297860 |
aatacaaa-aaaaggcgttgtacataggcggaacacctgaaaatacacaccctaaaaa-cacccctgaggataacatccaccaaaatacacatcaccacc |
8297763 |
T |
 |
| Q |
166 |
taaaac |
171 |
Q |
| |
|
|||||| |
|
|
| T |
8297762 |
taaaac |
8297757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 21398054 - 21398155
Alignment:
| Q |
111 |
aaacaccataaaaaacactcatgatgataacacc-accaaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatat |
209 |
Q |
| |
|
||||||| |||||||||| | ||| || ||||| || |||||||||||||||||||||||| ||| ||| ||||| ||||||| | || ||||||||| |
|
|
| T |
21398054 |
aaacaccttaaaaaacacccctgaggacaacacttacaaaaatacacgtcaccatctaaaacagacgccttcacgaaaacaacctttgtaaaaacgatat |
21398153 |
T |
 |
| Q |
210 |
cc |
211 |
Q |
| |
|
|| |
|
|
| T |
21398154 |
cc |
21398155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 24071952 - 24072013
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacac |
128 |
Q |
| |
|
|||||||| || |||| ||||||||||||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
24071952 |
aatacaaactaagggcgccgtatataggcggaacacccgaaaataaacatcataaaagacac |
24072013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 25657823 - 25657875
Alignment:
| Q |
79 |
aggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcat |
132 |
Q |
| |
|
||||| ||||||||||| ||||| || ||||||||||||||||||||||||||| |
|
|
| T |
25657823 |
aggcgccgtatataggcagaaca-cctaaaataaacaccataaaaaacactcat |
25657875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 31742557 - 31742504
Alignment:
| Q |
64 |
agaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacacc |
117 |
Q |
| |
|
|||| |||||| |||||||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
31742557 |
agaagtacaaacaaaaggcgccgtatataggcggaacacccgaaaacaaacacc |
31742504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 37108170 - 37108102
Alignment:
| Q |
86 |
gtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatac |
154 |
Q |
| |
|
|||||||||||||||||| |||||||||||| | |||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
37108170 |
gtatataggcggaacatcaaaaaataaacaccct-aaaaacacccatgaggataacacccaccaaaatac |
37108102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 4914190 - 4914294
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacac-cataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccat |
164 |
Q |
| |
|
||||| ||| ||||| | |||||||| ||||||||||||| ||||||| | | ||||||||||| ||| ||| ||| |||||||||||||| |||||| |
|
|
| T |
4914190 |
aatactaattaaaggtgtcgtatatatgcggaacatccgataataaaccctctaaaaaaacactcctgaggattacacccaccaaaatacacttcaccac |
4914289 |
T |
 |
| Q |
165 |
ctaaa |
169 |
Q |
| |
|
||||| |
|
|
| T |
4914290 |
ctaaa |
4914294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 13953949 - 13953997
Alignment:
| Q |
77 |
aaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaa |
125 |
Q |
| |
|
||||||| ||||||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
13953949 |
aaaggcgccgtatataggcggaacacctgaaaataaacaccttaaaaaa |
13953997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 23426690 - 23426627
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactc |
130 |
Q |
| |
|
||||||| ||||||| | ||||||||||||||||| ||||||||| || ||| | ||||||||| |
|
|
| T |
23426690 |
aatacaactaaaaggtgccgtatataggcggaacacccgaaaatacactccaaacaaaacactc |
23426627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 33109965 - 33110035
Alignment:
| Q |
143 |
ccaccaaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaa |
213 |
Q |
| |
|
|||||||||||||||||| || ||||||| || ||| ||||| ||| |||||| || ||||||||||||| |
|
|
| T |
33109965 |
ccaccaaaatacacgtcatcacctaaaacaaaccccttcacgaaaacgaccactgtaaaaacgatatccaa |
33110035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 50518780 - 50518964
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||||| ||||||||||||||| | |||||||| ||||| || ||| ||| |||||||||| |||||||| |
|
|
| T |
50518780 |
aatacaaacaaaaggtgtcgtatataggcggaacacccgaaaataaacaccct-aaaaacacccatgaggaccacacccaacaaaatacacctcaccatc |
50518878 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaagaccc |
254 |
Q |
| |
|
|||||| ||||||| ||||| || |||||| || |||||||||| | || ||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
50518879 |
taaaacagactccttcacga-taccaccactgtaaaaacgatatcta--acgatccatcgtcactactcacctccaaagaaaaacaccc |
50518964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 236
Target Start/End: Original strand, 33143643 - 33143811
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
||||||| |||||||| | ||||||||||||||| ||||||| ||||||| ||||||| | || || ||||||| |||||| || ||||||||||| | |
|
|
| T |
33143643 |
aatacaaccaaaaggcgtcatatataggcggaacacccgaaaa-aaacaccc-aaaaaactcccaagaggataacatccaccataaaacacgtcaccacc |
33143740 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcac |
236 |
Q |
| |
|
|||||| |||||| ||||| ||| |||||| | |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
33143741 |
taaaacaaactccttcacgaaaaccaccactgaacaaacgatatccaaccccatccgtcgtcactactcac |
33143811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 14194317 - 14194209
Alignment:
| Q |
70 |
acaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaa |
168 |
Q |
| |
|
||||| |||||| | | ||||||||||||||||||||||||||||| | | |||||||||||||| || ||| ||||||||||||||||||||| |||| |
|
|
| T |
14194317 |
acaaacaaaaggtgccttatataggcggaacatccgaaaataaacatcct-aaaaacactcatgaggaccacacccaccaaaatacacgtcaccacctaa |
14194219 |
T |
 |
| Q |
169 |
aactgactcc |
178 |
Q |
| |
|
||| |||||| |
|
|
| T |
14194218 |
aacagactcc |
14194209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 37123695 - 37123593
Alignment:
| Q |
143 |
ccaccaaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaa |
242 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||| || ||||| ||| |||||| || |||||||||||||||| | |||| |||||||||||| |||| |
|
|
| T |
37123695 |
ccaccaaaatacacatcaccatataaaatagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccacctgttgtcactactcaccgccaa |
37123596 |
T |
 |
| Q |
243 |
aga |
245 |
Q |
| |
|
||| |
|
|
| T |
37123595 |
aga |
37123593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 25594199 - 25594257
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaa |
125 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
25594199 |
aataaaaataaaatgcgtcgtatataggcggaacacccgaaagtaaacaccataaaaaa |
25594257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 4171134 - 4171077
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| | ||||||||||||| |||||| |
|
|
| T |
4171134 |
aatacaaacaaaaggcgtcgtatataggcggaacacctgaaaataaacaccctaaaaa |
4171077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 14280240 - 14280289
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacac |
116 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||||| ||||||| |
|
|
| T |
14280240 |
aatacaaattaaaggcgccgtatataggcggaacacccgaaagtaaacac |
14280289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 25648073 - 25648016
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||||| ||||||||||||||| |||||| |
|
|
| T |
25648073 |
aatacaaacaaaaggcgcagtatatagacggaacacccgaaaataaacaccctaaaaa |
25648016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 14893318 - 14893263
Alignment:
| Q |
69 |
tacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||| | ||||||||||||| |||||| |
|
|
| T |
14893318 |
tacaaacaaaagacgccgtatataggcggaacacctgaaaataaacaccctaaaaa |
14893263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 48893062 - 48893156
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaaaactgactcct |
179 |
Q |
| |
|
|||||||| | |||||||||||||||||||| | | |||||||| | ||| || |||| ||||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
48893062 |
cgtatataagaggaacatccgaaaataaaca-ctttaaaaacacccctgaagacaacacccaccaaaatacatgtcaccacctaaaagagactcct |
48893156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 45354599 - 45354660
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacac |
128 |
Q |
| |
|
||||||||| ||||| | ||||| |||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
45354599 |
aatacaaattaaaggtgttgtatagaggcggaatatccgaaaataaacatcataaaagacac |
45354660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 37998900 - 37998956
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
|||||||| |||| | | ||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
37998900 |
aatacaaacaaaatgtgccgtatataggcggaatgtccgaaaataaacaccttaaaa |
37998956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 37770359 - 37770514
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaaaactgactcctacac |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | |||||||| ||||| |||| || |||||||||| |||||||||| ||||||| ||||||| ||| |
|
|
| T |
37770359 |
cgtatataggcggaacacccgaaaataaacaccct-aaaaacac-catgaggataccacccaccaaaatccacgtcaccacctaaaacagactccttcac |
37770456 |
T |
 |
| Q |
184 |
gagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
|| ||| ||||||||| ||||||||| | | ||||||||||||| | |||||||||||| |
|
|
| T |
37770457 |
gaaaaccaccactata--------atccaacaccacccgtcgtcactactcgcccccaaagaaaaa |
37770514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 4975135 - 4974985
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||| ||||||||||||||| | ||||||| | ||| ||||||| |||||||| ||||| ||||| | |
|
|
| T |
4975135 |
aatacaaactaaaggcgtcgtatataggctgaacacccgaaaataaacaccctgaaaaacatccttgaggataacacccaccaaattacacaccaccacc |
4975036 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacac |
216 |
Q |
| |
|
|||||| |||| || ||||| ||| |||||| || ||||||||||| |||| |
|
|
| T |
4975035 |
taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcccacac |
4974985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 4993043 - 4992893
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||| ||||||||||||||| | ||||||| | ||| ||||||| |||||||| ||||| ||||| | |
|
|
| T |
4993043 |
aatacaaactaaaggcgtcgtatataggctgaacacccgaaaataaacaccctgaaaaacatccttgaggataacacccaccaaattacacaccaccacc |
4992944 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacac |
216 |
Q |
| |
|
|||||| |||| || ||||| ||| |||||| || ||||||||||| |||| |
|
|
| T |
4992943 |
taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcccacac |
4992893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 249
Target Start/End: Complemental strand, 34230591 - 34230410
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||| | |||||||||| | |||||| ||| | | | | |||| ||||||||||||||||||||||| |
|
|
| T |
34230591 |
aatacaaacaaaagacgccgtatataggcggaacaccaaaaaataaacatcgtaaaaa-caccccttagaacaacatccaccaaaatacacgtcaccatc |
34230493 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
| |||| ||||| | ||||| ||| ||||||||| ||||||||||||||| | | |||| ||||||||| ||||||||||| |
|
|
| T |
34230492 |
t-aaacagactcttccacgaaaacgaccactataaaaacgatatccaacaacacccgtcgcaactactcacctccaaagaaaaa |
34230410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 4472333 - 4472276
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
|||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4472333 |
aatacaaactaaaggcgtcgtatatagacggaacatccgaaaataaacaccataaaaa |
4472276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 41113450 - 41113573
Alignment:
| Q |
86 |
gtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacaccaccaaaatacacgtcaccatctaaaactgactcctacacga |
185 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||| ||||| | | ||||||||||| |||| || | ||||||| ||||||| ||||| |
|
|
| T |
41113450 |
gtatataggcggaacatccgaaaataaataccctaaaaaacacccatgagggca--cccaccaaaataaacgttactacctaaaacagactccttcacga |
41113547 |
T |
 |
| Q |
186 |
gaacaaccactatataaacgatatcc |
211 |
Q |
| |
|
||| || | | || ||||||||||| |
|
|
| T |
41113548 |
aaacgactattgtacaaacgatatcc |
41113573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 22884805 - 22884866
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacac |
128 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |
|
|
| T |
22884805 |
aatacaaactaaaggcgtcgtatataggcggaacacccgaaaataaactccatacaaaacac |
22884866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 12343127 - 12343060
Alignment:
| Q |
147 |
caaaatacacgtcaccatctaaaactgactcctacacgagaacaaccactatataaacgatatccaac |
214 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||||| ||| ||| || || |||||||||||||| |
|
|
| T |
12343127 |
caaaatacacgtcaccacctaaaacagactccttcacgaaaacgacctctgtaaaaacgatatccaac |
12343060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 13337640 - 13337583
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
|||||||| |||||||| |||||||||| |||||| | ||||||||||||| |||||| |
|
|
| T |
13337640 |
aatacaaacaaaaggcgtcgtatataggtggaacacctgaaaataaacaccctaaaaa |
13337583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 7696351 - 7696248
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||| || |||||||||||| | |||||||| | || || |||| |||||||||||||| |||||| | |
|
|
| T |
7696351 |
aatacaaacaaaaggaaccgtatataggcggaacacccaaaaataaacacc-ttaaaaacacccccgaggacaacacccaccaaaatacacatcaccacc |
7696253 |
T |
 |
| Q |
166 |
taaaa |
170 |
Q |
| |
|
||||| |
|
|
| T |
7696252 |
taaaa |
7696248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 27740378 - 27740319
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaac |
126 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||||| |||||||||||| ||||| ||||| |
|
|
| T |
27740378 |
aatacaaactaaaggcgtcgtatataggtggaacacccgaaaataaactccatacaaaac |
27740319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 29997345 - 29997287
Alignment:
| Q |
57 |
tgaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaaca |
115 |
Q |
| |
|
||||||| ||||| ||| ||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
29997345 |
tgaaattgaaaataaaaacaaaaggcaccgtatataagcggaacatccgaaaataaaca |
29997287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 16952053 - 16952098
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactc |
130 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||||||| |||||| |
|
|
| T |
16952053 |
cgtatataggcagaacatccaaaaataaacatcataaaagacactc |
16952098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 17022718 - 17022763
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaacactc |
130 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||||||| |||||| |
|
|
| T |
17022718 |
cgtatataggcagaacatccaaaaataaacatcataaaagacactc |
17022763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 33788316 - 33788377
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacac |
128 |
Q |
| |
|
|||||||| ||||||| |||||||| |||||||| ||||||||||| ||||| ||||||| |
|
|
| T |
33788316 |
aatacaaactaaaggcgccgtatatatgcggaacacccgaaaataaaatccatacaaaacac |
33788377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 44594068 - 44594012
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
|||||||| |||||||| ||| ||||| |||| |||||||||||||||||| |||| |
|
|
| T |
44594068 |
aatacaaacaaaaggcgtcgtgtatagatggaatatccgaaaataaacaccaaaaaa |
44594012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 16954878 - 16954750
Alignment:
| Q |
68 |
atacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataac-accaccaaaatacacgtcaccatct |
166 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||| | ||| || ||| ||||| |||||||||||||||| || |
|
|
| T |
16954878 |
atacaaataaaaggcaccgtatataggcggaacatccgaaaataaacacgct-aaaaacacccctgaagaaaacaaccacaaaaatacacgtcaccacct |
16954780 |
T |
 |
| Q |
167 |
aaaactgactcctacacgagaacaaccact |
196 |
Q |
| |
|
||||| ||| || || || |||||||||| |
|
|
| T |
16954779 |
aaaacagacatcttcaagaaaacaaccact |
16954750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 36674872 - 36674810
Alignment:
| Q |
55 |
ggtgaaattagaaatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacacc |
117 |
Q |
| |
|
||||||||| || ||||||| |||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
36674872 |
ggtgaaattggagatacaaacaaaaggcgtcgtatataggcggaatatccgaaaataaacacc |
36674810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 6492859 - 6492934
Alignment:
| Q |
105 |
gaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatctaaaactgactcct |
179 |
Q |
| |
|
|||||||||||||||||||||||| |||| || |||| |||||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
6492859 |
gaaaataaacaccataaaaaacacctatgaggacaacatccaccaaaattcacgtcaccacctaaaacagactcct |
6492934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 16828791 - 16828920
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataac-accaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||| ||| ||||||||||||||||| ||||||||||||| | | | ||| || | ||| || ||| ||||||||||||||| ||| |||| |
|
|
| T |
16828791 |
aatacaaacaaaatgcgccgtatataggcggaacacccgaaaataaacatcct-agaaatacccctgaagaaaacaaccaccaaaatacacatcatcatc |
16828889 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccact |
196 |
Q |
| |
|
|||||||| | ||| || || |||||||||| |
|
|
| T |
16828890 |
taaaactggccccttcaagaaaacaaccact |
16828920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 28534195 - 28534240
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataa |
112 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
28534195 |
aatacaaataaaaggcgccgtatataggcggaacacccgaaaataa |
28534240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 249
Target Start/End: Complemental strand, 33719355 - 33719174
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| ||| |||| | ||||||||||||||| ||||| |||||||| | |||||||||||||| || |||| |||||||||||| ||||| | |
|
|
| T |
33719355 |
aatacaaacaaacggcgctgaatataggcggaacat-cgaaagtaaacaccct-aaaaacactcatgaggacaacacccaccaaaatacctatcaccgcc |
33719258 |
T |
 |
| Q |
166 |
taaaactgactcctacac-gagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
|||||| ||||||| ||| | ||| ||| || || ||| |||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
33719257 |
taaaaccgactccttcacaaaaaacgacctctgtaaaaatgatatccaacactactcatcgtcactactcac-cccaaagaaaaa |
33719174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 3478729 - 3478683
Alignment:
| Q |
77 |
aaaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
3478729 |
aaaggcgccgtatataggcggaacacccgaaaataaacaccctaaaa |
3478683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 6716427 - 6716608
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacacc--ataaaaaacactcatgatgataacacc-accaaaatacacgtcacca |
163 |
Q |
| |
|
||||||||| ||||| | |||||||| ||||||| | ||||||||||||| | |||||||||||| || ||||||||| ||| || |||| | ||||| |
|
|
| T |
6716427 |
aatacaaattaaaggggccgtatataaccggaacacctgaaaataaacaccctaaaaaaaacactcacgaggataacaccaacccaagtacatgacacca |
6716526 |
T |
 |
| Q |
164 |
tctaaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaa |
247 |
Q |
| |
|
||||||| |||||| ||||| ||| |||||| || ||||| |||| |||| | | | |||||||||||| ||||| |||| |
|
|
| T |
6716527 |
cctaaaac--actccttcacgaaaacgaccactgtaaaaacggtatctcacaccacccattgtcactactcacccccaacgaaa |
6716608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 23983634 - 23983578
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
||||||||| |||||| |||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
23983634 |
aatacaaattaaaggcatcgtatataggcggagcatccaaaaataaacatcataaaa |
23983578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 26385857 - 26385912
Alignment:
| Q |
76 |
aaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcat |
132 |
Q |
| |
|
||||| || ||||||||||||||||| || ||||||||||||||||||| ||||||| |
|
|
| T |
26385857 |
aaaagacgccgtatataggcggaacaccc-aaaataaacaccataaaaatcactcat |
26385912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 2331792 - 2331832
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaac |
126 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
2331792 |
cgtatatagacggaacatcc-aaaataaacaccataaaaaac |
2331832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 2339325 - 2339365
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaataaacaccataaaaaac |
126 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
2339325 |
cgtatatagacggaacatcc-aaaataaacaccataaaaaac |
2339365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 8745410 - 8745357
Alignment:
| Q |
201 |
aaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaagaccc |
254 |
Q |
| |
|
|||| ||||||||||| ||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
8745410 |
aaacaatatccaacaccatccttcgtcactactcacccccaaagaaaaacaccc |
8745357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 42532950 - 42533007
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaa |
124 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| | | ||||||||||| |||||| |
|
|
| T |
42532950 |
aatacaaccaaaaggcgccgtatataggcggaacacctggaaataaacaccctaaaaa |
42533007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 24324520 - 24324607
Alignment:
| Q |
98 |
aacatccgaaaataaacaccataaaaaacactcatgatgataacac-caccaaaatacacgtcaccatctaaaactgactcctacacga |
185 |
Q |
| |
|
|||| |||||||||||||| |||||| ||| | ||| || ||||| |||||||||||||||||||| |||||| ||||||| ||||| |
|
|
| T |
24324520 |
aacacccgaaaataaacactctaaaaa-cacccttgaggacaacactcaccaaaatacacgtcaccacttaaaacagactccttcacga |
24324607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 25438730 - 25438690
Alignment:
| Q |
85 |
cgtatataggcggaacatccgaaaa-taaacaccataaaaa |
124 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
25438730 |
cgtatataggcggaacacccgaaaagtaaacaccataaaaa |
25438690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 246
Target Start/End: Complemental strand, 58518 - 58339
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataacacca-ccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||| ||| |||||||| |||||||||| ||||| || |||||||| ||| |||||| ||| ||||| | | || || ||||| ||||| |||||| | |
|
|
| T |
58518 |
aatagaaacaaaaggcgccgtatataggtagaacacccaaaaataaataccctaaaaa-cacccatgagaacaccatcagccaaagtacacatcaccacc |
58420 |
T |
 |
| Q |
166 |
taaaactgactcctacacgagaacaaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaa |
246 |
Q |
| |
|
||||| ||||||| ||||| ||| |||| | || || |||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
58419 |
aaaaacagactccttcacgaaaacgaccattgtaaaactgatatccaacactacccgtcgtcactactcacacccaaagaa |
58339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 15120293 - 15120404
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacactcatgatgataaca-ccaccaaaatacacgtcaccatc |
165 |
Q |
| |
|
|||||||| |||| |||||||| ||||| ||||||| || |||||||||| ||||||||| ||||| || |||| |||||||||||||| |||||| | |
|
|
| T |
15120293 |
aatacaaactaaagacgacgtatgtaggcagaacatctgacaataaacaccctaaaaaacatccatgaggacaacatccaccaaaatacacatcaccacc |
15120392 |
T |
 |
| Q |
166 |
taaaactgactc |
177 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
15120393 |
taaaacagactc |
15120404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 3880411 - 3880469
Alignment:
| Q |
191 |
accactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||||||| |
|
|
| T |
3880411 |
accactataaaaacgatatccaacaccatctgtcgtcactactcaccccctaagaaaaa |
3880469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 17278163 - 17278214
Alignment:
| Q |
77 |
aaaggcgacgtatataggcggaacatccgaaaataaacaccataaaaaacac |
128 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
17278163 |
aaaggcgtcgtatataggcggaacacccgaaaataaacatcataaaagacac |
17278214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 20500323 - 20500278
Alignment:
| Q |
86 |
gtatataggcggaacatccgaaaataaacaccataaaaaacactcat |
132 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||| |||||||| |
|
|
| T |
20500323 |
gtatataggcggaacaccc-aaaataaacaccataaaagacactcat |
20500278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 20701614 - 20701674
Alignment:
| Q |
189 |
caaccactatataaacgatatccaacactatctgtcgtcactactcacacccaaagaaaaa |
249 |
Q |
| |
|
|||||||| || ||||||||||||| |||| | |||||||||||||| |||||| ||||| |
|
|
| T |
20701614 |
caaccactgtaaaaacgatatccaatactacccatcgtcactactcacccccaaaaaaaaa |
20701674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1613 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1613
Description:
Target: scaffold1613; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 686 - 742
Alignment:
| Q |
67 |
aatacaaataaaaggcgacgtatataggcggaacatccgaaaataaacaccataaaa |
123 |
Q |
| |
|
|||||||| |||| || |||||||| | |||||| ||||||||||||||||||||| |
|
|
| T |
686 |
aatacaaactaaagacgtcgtatatatgtggaacacccgaaaataaacaccataaaa |
742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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