View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1350_low_38 (Length: 290)
Name: NF1350_low_38
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1350_low_38 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 14335495 - 14335627
Alignment:
| Q |
51 |
aatatgaagttgagtcaagcaaacagaaaccactacaatgaagaatacatgaaaaaagttatatatattatcttcaagaccaagcatcacattgacatca |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14335495 |
aatatgaagttgagtcaagcaaacagaaaccactacaatgaagaatacatgaaaaaagttatatatattatcgtcaagaccaagcatcacattgacatca |
14335594 |
T |
|
| Q |
151 |
taaaataataaatgaaacacatgaagaatgatt |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
14335595 |
taaaataataaatgaaacacatgaagaatgatt |
14335627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University