View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1350_low_45 (Length: 251)

Name: NF1350_low_45
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1350_low_45
NF1350_low_45
[»] chr8 (45 HSPs)
chr8 (7-141)||(13138260-13138394)
chr8 (7-142)||(6470843-6470978)
chr8 (7-141)||(29790941-29791075)
chr8 (7-141)||(1580893-1581027)
chr8 (15-140)||(40013651-40013776)
chr8 (137-245)||(1581439-1581547)
chr8 (15-142)||(45081810-45081937)
chr8 (7-140)||(8351008-8351141)
chr8 (15-140)||(30289924-30290049)
chr8 (52-140)||(38845200-38845288)
chr8 (15-140)||(2805612-2805737)
chr8 (136-245)||(43976593-43976702)
chr8 (15-143)||(38739654-38739782)
chr8 (7-140)||(43066127-43066259)
chr8 (50-140)||(3293273-3293363)
chr8 (51-140)||(45253749-45253839)
chr8 (12-129)||(14522391-14522508)
chr8 (15-140)||(30380530-30380655)
chr8 (15-140)||(37709899-37710024)
chr8 (135-244)||(12532360-12532469)
chr8 (51-134)||(886239-886322)
chr8 (139-242)||(14523205-14523308)
chr8 (50-140)||(2986339-2986428)
chr8 (7-112)||(12893559-12893664)
chr8 (55-140)||(14847210-14847295)
chr8 (12-121)||(44123692-44123801)
chr8 (52-143)||(31127978-31128069)
chr8 (15-123)||(23248794-23248902)
chr8 (15-107)||(39361158-39361250)
chr8 (52-143)||(18809273-18809364)
chr8 (50-120)||(10657998-10658068)
chr8 (52-143)||(11854521-11854612)
chr8 (12-121)||(9302486-9302595)
chr8 (50-118)||(25256356-25256424)
chr8 (51-140)||(23764623-23764713)
chr8 (188-245)||(12795972-12796029)
chr8 (52-121)||(42785917-42785986)
chr8 (105-140)||(6471071-6471106)
chr8 (70-140)||(7603495-7603563)
chr8 (62-137)||(10536953-10537028)
chr8 (52-111)||(25173843-25173902)
chr8 (50-79)||(6470784-6470813)
chr8 (135-175)||(5423462-5423502)
chr8 (105-141)||(14522605-14522641)
chr8 (139-175)||(42373926-42373962)
[»] chr4 (72 HSPs)
chr4 (7-140)||(18360101-18360234)
chr4 (7-140)||(36602694-36602827)
chr4 (7-141)||(23255934-23256068)
chr4 (7-142)||(39786485-39786619)
chr4 (50-145)||(4209358-4209453)
chr4 (12-140)||(5123290-5123418)
chr4 (135-245)||(44991798-44991908)
chr4 (15-140)||(3901275-3901400)
chr4 (15-144)||(4264130-4264259)
chr4 (15-140)||(46212486-46212611)
chr4 (12-140)||(55190847-55190975)
chr4 (135-245)||(12191472-12191582)
chr4 (135-241)||(40445715-40445821)
chr4 (50-140)||(46803631-46803721)
chr4 (15-140)||(28166274-28166399)
chr4 (15-140)||(45198476-45198601)
chr4 (15-146)||(26205840-26205971)
chr4 (50-140)||(3442515-3442605)
chr4 (50-140)||(47579287-47579377)
chr4 (15-140)||(5735271-5735396)
chr4 (7-140)||(7738947-7739080)
chr4 (7-140)||(39260260-39260391)
chr4 (15-142)||(6494586-6494713)
chr4 (15-138)||(28151993-28152116)
chr4 (15-140)||(5744219-5744344)
chr4 (15-140)||(21859055-21859180)
chr4 (15-140)||(21914918-21915043)
chr4 (12-121)||(50033039-50033148)
chr4 (52-140)||(19634021-19634109)
chr4 (137-245)||(32409470-32409578)
chr4 (15-135)||(37688169-37688289)
chr4 (50-121)||(19731336-19731407)
chr4 (52-143)||(25644356-25644447)
chr4 (136-231)||(38068458-38068553)
chr4 (7-109)||(3443515-3443617)
chr4 (7-125)||(42187107-42187225)
chr4 (51-140)||(19170711-19170800)
chr4 (51-140)||(19652427-19652516)
chr4 (135-235)||(51175474-51175574)
chr4 (50-125)||(1377047-1377122)
chr4 (15-138)||(49768447-49768570)
chr4 (52-121)||(19631327-19631396)
chr4 (12-121)||(50035558-50035667)
chr4 (50-118)||(19525885-19525953)
chr4 (52-118)||(6923113-6923179)
chr4 (57-112)||(23603825-23603880)
chr4 (137-219)||(31767883-31767965)
chr4 (7-109)||(50971491-50971592)
chr4 (50-135)||(20678758-20678843)
chr4 (50-114)||(53568380-53568444)
chr4 (57-121)||(55014281-55014345)
chr4 (52-108)||(55997146-55997202)
chr4 (52-118)||(26659862-26659928)
chr4 (137-245)||(45832162-45832267)
chr4 (56-121)||(51737130-51737195)
chr4 (70-141)||(39195672-39195743)
chr4 (70-121)||(14958027-14958078)
chr4 (52-111)||(10181017-10181076)
chr4 (62-121)||(31486305-31486364)
chr4 (187-244)||(13665798-13665855)
chr4 (187-244)||(13678655-13678712)
chr4 (142-220)||(39719016-39719098)
chr4 (192-244)||(17058848-17058900)
chr4 (53-89)||(27976744-27976780)
chr4 (52-111)||(39193941-39194000)
chr4 (187-245)||(38068090-38068148)
chr4 (139-169)||(38068420-38068450)
chr4 (187-245)||(38168168-38168226)
chr4 (139-169)||(51175437-51175467)
chr4 (137-175)||(56228561-56228599)
chr4 (137-169)||(12191433-12191465)
chr4 (137-169)||(44991915-44991947)
[»] chr5 (45 HSPs)
chr5 (7-140)||(4924966-4925099)
chr5 (7-140)||(35290286-35290419)
chr5 (50-141)||(37516143-37516234)
chr5 (7-140)||(39036410-39036543)
chr5 (7-140)||(5213050-5213183)
chr5 (54-143)||(32334815-32334904)
chr5 (51-130)||(37843747-37843826)
chr5 (50-140)||(35448168-35448258)
chr5 (15-141)||(42148306-42148432)
chr5 (15-140)||(29627268-29627393)
chr5 (15-140)||(38697963-38698088)
chr5 (15-140)||(40512816-40512941)
chr5 (51-140)||(41411330-41411419)
chr5 (7-128)||(43517188-43517309)
chr5 (50-141)||(23988578-23988669)
chr5 (51-141)||(1830653-1830743)
chr5 (50-143)||(30779916-30780009)
chr5 (51-140)||(40316121-40316210)
chr5 (15-139)||(5364421-5364545)
chr5 (51-130)||(14475406-14475485)
chr5 (15-140)||(39894781-39894906)
chr5 (50-140)||(19889654-19889744)
chr5 (15-140)||(32002150-32002275)
chr5 (50-121)||(42421704-42421775)
chr5 (137-250)||(8516952-8517065)
chr5 (52-118)||(4300005-4300071)
chr5 (52-118)||(16048105-16048171)
chr5 (7-121)||(25563519-25563633)
chr5 (55-143)||(43067226-43067314)
chr5 (52-143)||(970135-970226)
chr5 (81-140)||(16954690-16954749)
chr5 (52-143)||(39405761-39405852)
chr5 (52-118)||(22613882-22613948)
chr5 (55-121)||(19087946-19088012)
chr5 (50-112)||(19868856-19868918)
chr5 (50-123)||(2863971-2864044)
chr5 (52-121)||(15268129-15268198)
chr5 (136-175)||(15958817-15958856)
chr5 (52-107)||(24520242-24520296)
chr5 (52-111)||(21961256-21961315)
chr5 (187-245)||(4898193-4898251)
chr5 (105-145)||(14475225-14475265)
chr5 (137-169)||(15958864-15958896)
chr5 (92-140)||(37304358-37304406)
chr5 (105-141)||(37843574-37843610)
[»] chr7 (51 HSPs)
chr7 (139-245)||(584022-584128)
chr7 (7-140)||(21392018-21392151)
chr7 (15-144)||(19072765-19072894)
chr7 (7-140)||(31466486-31466619)
chr7 (15-140)||(36819696-36819821)
chr7 (15-140)||(42086774-42086899)
chr7 (12-140)||(23474102-23474230)
chr7 (15-141)||(47080979-47081105)
chr7 (15-140)||(2400285-2400410)
chr7 (15-140)||(28185544-28185669)
chr7 (15-140)||(37951081-37951206)
chr7 (15-140)||(47713638-47713763)
chr7 (7-136)||(48531326-48531455)
chr7 (15-142)||(36905524-36905651)
chr7 (138-241)||(43786637-43786740)
chr7 (50-140)||(44479891-44479981)
chr7 (15-140)||(32619078-32619203)
chr7 (15-140)||(36859344-36859469)
chr7 (7-130)||(47537933-47538056)
chr7 (7-139)||(31110625-31110755)
chr7 (135-244)||(44592048-44592157)
chr7 (52-143)||(10464288-10464379)
chr7 (52-143)||(37231737-37231828)
chr7 (135-245)||(2842510-2842620)
chr7 (50-140)||(34478182-34478272)
chr7 (135-245)||(48557910-48558019)
chr7 (7-140)||(42834420-42834553)
chr7 (52-143)||(35500920-35501011)
chr7 (50-141)||(31497874-31497965)
chr7 (52-118)||(36643184-36643250)
chr7 (55-140)||(4612263-4612348)
chr7 (135-240)||(8515582-8515683)
chr7 (74-140)||(47713774-47713840)
chr7 (50-121)||(27916613-27916684)
chr7 (7-101)||(18795268-18795362)
chr7 (52-130)||(4033301-4033379)
chr7 (55-145)||(42493806-42493896)
chr7 (52-116)||(2450712-2450777)
chr7 (65-121)||(38198500-38198556)
chr7 (70-121)||(33613235-33613286)
chr7 (7-106)||(39982242-39982341)
chr7 (7-113)||(29770602-29770708)
chr7 (188-245)||(8488744-8488801)
chr7 (135-175)||(8488834-8488874)
chr7 (105-143)||(34478005-34478043)
chr7 (139-169)||(48557873-48557903)
chr7 (137-169)||(583979-584011)
chr7 (137-169)||(43786595-43786627)
chr7 (137-169)||(44592009-44592041)
chr7 (70-142)||(47841253-47841325)
chr7 (205-245)||(48767866-48767906)
[»] chr1 (52 HSPs)
chr1 (136-245)||(49650068-49650177)
chr1 (7-141)||(25531777-25531911)
chr1 (136-245)||(26991806-26991915)
chr1 (7-140)||(32565746-32565879)
chr1 (7-140)||(30529178-30529311)
chr1 (136-245)||(35718867-35718976)
chr1 (15-140)||(48219778-48219903)
chr1 (15-142)||(48264947-48265074)
chr1 (139-244)||(30627166-30627271)
chr1 (7-140)||(37281092-37281225)
chr1 (15-140)||(39354400-39354525)
chr1 (15-140)||(50539260-50539385)
chr1 (135-245)||(12705224-12705335)
chr1 (15-142)||(50876362-50876489)
chr1 (15-141)||(32988485-32988611)
chr1 (50-140)||(38458729-38458819)
chr1 (54-140)||(48376158-48376244)
chr1 (50-140)||(52378989-52379079)
chr1 (51-140)||(23569846-23569935)
chr1 (13-140)||(3529176-3529303)
chr1 (50-140)||(29161842-29161932)
chr1 (7-117)||(45234973-45235083)
chr1 (135-245)||(45468014-45468124)
chr1 (142-245)||(47675909-47676012)
chr1 (7-121)||(16751581-16751695)
chr1 (55-136)||(4605002-4605083)
chr1 (55-144)||(49805428-49805517)
chr1 (7-123)||(31971515-31971631)
chr1 (50-118)||(47222236-47222304)
chr1 (52-140)||(50481278-50481366)
chr1 (54-121)||(38738153-38738220)
chr1 (52-143)||(16265030-16265121)
chr1 (52-143)||(16266159-16266250)
chr1 (52-143)||(26441634-26441725)
chr1 (52-143)||(43680066-43680157)
chr1 (50-112)||(42708532-42708594)
chr1 (52-143)||(3898744-3898835)
chr1 (52-143)||(24982348-24982439)
chr1 (50-113)||(1849726-1849789)
chr1 (50-99)||(41501779-41501828)
chr1 (57-121)||(14075754-14075818)
chr1 (52-121)||(23330471-23330540)
chr1 (52-121)||(21034703-21034772)
chr1 (137-169)||(30627282-30627314)
chr1 (137-175)||(30796686-30796724)
chr1 (187-245)||(46688790-46688847)
chr1 (52-121)||(31698761-31698830)
chr1 (137-169)||(12705342-12705374)
chr1 (50-121)||(23340812-23340881)
chr1 (137-169)||(26991923-26991955)
chr1 (137-169)||(35718984-35719016)
chr1 (137-169)||(49650028-49650060)
[»] chr3 (54 HSPs)
chr3 (7-141)||(25097315-25097449)
chr3 (50-140)||(46483551-46483641)
chr3 (136-245)||(55222350-55222459)
chr3 (7-142)||(29728226-29728361)
chr3 (7-142)||(27848950-27849084)
chr3 (7-129)||(32285304-32285426)
chr3 (15-140)||(7459956-7460081)
chr3 (15-144)||(21906992-21907121)
chr3 (7-140)||(38492052-38492184)
chr3 (53-140)||(34827322-34827409)
chr3 (15-137)||(10571280-10571402)
chr3 (15-141)||(37832899-37833025)
chr3 (17-135)||(51392430-51392548)
chr3 (15-140)||(8559141-8559266)
chr3 (15-140)||(18659052-18659177)
chr3 (15-140)||(43137851-43137976)
chr3 (51-140)||(49057856-49057945)
chr3 (52-140)||(53066375-53066462)
chr3 (55-140)||(54840304-54840389)
chr3 (7-127)||(10437295-10437415)
chr3 (52-140)||(15503025-15503113)
chr3 (50-130)||(38833674-38833754)
chr3 (7-135)||(47638060-47638188)
chr3 (50-130)||(51062400-51062480)
chr3 (52-123)||(45167316-45167387)
chr3 (50-140)||(1327311-1327401)
chr3 (50-140)||(3547591-3547681)
chr3 (53-121)||(45093739-45093807)
chr3 (50-121)||(9145521-9145592)
chr3 (50-121)||(28690535-28690606)
chr3 (135-245)||(19611096-19611207)
chr3 (50-121)||(35718026-35718097)
chr3 (50-141)||(48707014-48707105)
chr3 (135-245)||(3935775-3935885)
chr3 (54-140)||(52668660-52668746)
chr3 (7-143)||(17052861-17052997)
chr3 (52-143)||(4238793-4238884)
chr3 (50-121)||(7671484-7671555)
chr3 (52-143)||(32951309-32951400)
chr3 (52-118)||(10435156-10435222)
chr3 (52-121)||(36665038-36665107)
chr3 (81-140)||(16365449-16365508)
chr3 (60-142)||(52550797-52550879)
chr3 (72-141)||(39435228-39435297)
chr3 (187-245)||(47142759-47142817)
chr3 (187-244)||(23059106-23059163)
chr3 (50-118)||(48143787-48143854)
chr3 (139-220)||(5992251-5992329)
chr3 (187-245)||(1151627-1151685)
chr3 (139-169)||(19611059-19611089)
chr3 (135-172)||(1292507-1292544)
chr3 (137-174)||(3935886-3935923)
chr3 (105-146)||(53066596-53066637)
chr3 (137-169)||(1292468-1292500)
[»] chr6 (22 HSPs)
chr6 (7-140)||(643559-643692)
chr6 (15-142)||(11114563-11114690)
chr6 (50-140)||(30237165-30237256)
chr6 (51-144)||(13207125-13207218)
chr6 (51-140)||(33121542-33121631)
chr6 (7-140)||(18991904-18992036)
chr6 (15-142)||(31854816-31854943)
chr6 (15-140)||(24150741-24150866)
chr6 (7-140)||(25435412-25435544)
chr6 (15-115)||(29986294-29986394)
chr6 (52-123)||(22020293-22020364)
chr6 (50-143)||(29403641-29403734)
chr6 (15-144)||(7098009-7098134)
chr6 (135-219)||(17096442-17096526)
chr6 (50-144)||(8796046-8796140)
chr6 (50-142)||(20662230-20662323)
chr6 (53-118)||(25163186-25163251)
chr6 (50-121)||(19068939-19069010)
chr6 (186-245)||(19687609-19687668)
chr6 (52-142)||(16434701-16434791)
chr6 (138-175)||(19687414-19687451)
chr6 (105-140)||(16696016-16696051)
[»] chr2 (47 HSPs)
chr2 (7-140)||(7443019-7443152)
chr2 (13-139)||(41463651-41463777)
chr2 (15-140)||(23671376-23671501)
chr2 (50-140)||(14372077-14372167)
chr2 (7-140)||(9877211-9877344)
chr2 (15-140)||(18718239-18718364)
chr2 (7-140)||(30708728-30708861)
chr2 (51-140)||(32776072-32776161)
chr2 (15-140)||(34826912-34827037)
chr2 (15-140)||(42038523-42038648)
chr2 (15-137)||(14707670-14707792)
chr2 (50-140)||(40425420-40425510)
chr2 (15-140)||(3987368-3987493)
chr2 (15-140)||(41172893-41173018)
chr2 (13-141)||(44283413-44283541)
chr2 (135-245)||(12184683-12184793)
chr2 (7-140)||(4045361-4045494)
chr2 (137-245)||(28967631-28967739)
chr2 (135-250)||(10624774-10624889)
chr2 (52-123)||(44330401-44330472)
chr2 (135-249)||(14332369-14332483)
chr2 (15-145)||(16941947-16942077)
chr2 (15-145)||(17012612-17012742)
chr2 (50-140)||(20517419-20517509)
chr2 (50-144)||(24283129-24283222)
chr2 (15-140)||(27559575-27559700)
chr2 (51-140)||(38963519-38963608)
chr2 (52-143)||(40598125-40598216)
chr2 (7-140)||(4045850-4045983)
chr2 (15-123)||(36199087-36199195)
chr2 (50-121)||(38137701-38137772)
chr2 (50-121)||(40898659-40898730)
chr2 (50-141)||(332277-332366)
chr2 (50-140)||(13399276-13399366)
chr2 (7-141)||(39418148-39418282)
chr2 (7-91)||(30776321-30776405)
chr2 (62-130)||(38588072-38588140)
chr2 (55-121)||(4083226-4083292)
chr2 (70-123)||(5030462-5030515)
chr2 (12-121)||(42951359-42951468)
chr2 (52-98)||(43925254-43925300)
chr2 (136-203)||(36749917-36749984)
chr2 (50-89)||(7106329-7106368)
chr2 (106-147)||(20917722-20917763)
chr2 (187-247)||(3703518-3703578)
chr2 (52-111)||(25786591-25786651)
chr2 (105-141)||(32775902-32775938)
[»] scaffold0051 (1 HSPs)
scaffold0051 (50-142)||(41388-41480)
[»] scaffold0366 (2 HSPs)
scaffold0366 (50-145)||(14054-14149)
scaffold0366 (15-145)||(10388-10518)
[»] scaffold0459 (1 HSPs)
scaffold0459 (15-145)||(12747-12877)
[»] scaffold0092 (1 HSPs)
scaffold0092 (15-140)||(44244-44369)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-144)||(15344-15481)
[»] scaffold0027 (1 HSPs)
scaffold0027 (15-141)||(117320-117446)
[»] scaffold0111 (1 HSPs)
scaffold0111 (50-121)||(38531-38602)
[»] scaffold0086 (1 HSPs)
scaffold0086 (187-245)||(33259-33317)
[»] scaffold0340 (1 HSPs)
scaffold0340 (55-140)||(14345-14430)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-244)||(11510-11571)
[»] scaffold0294 (1 HSPs)
scaffold0294 (52-93)||(12619-12660)
[»] scaffold0568 (1 HSPs)
scaffold0568 (192-244)||(781-833)
[»] scaffold0687 (1 HSPs)
scaffold0687 (70-140)||(1177-1245)


Alignment Details
Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 13138260 - 13138394
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13138260 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 13138359  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||| ||||||||||||||||||||||    
T  13138360 caactaggtcatttattgagggacagagggagtaa 13138394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 6470978 - 6470843
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6470978 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagt 6470879  T
Q  107 caactaggtcatctattgagggacagagggagtaat 142  Q
    |||||||||||| ||||||||||| | |||||||||    
T  6470878 caactaggtcatatattgagggacggtgggagtaat 6470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 29791075 - 29790941
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29791075 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 29790976  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||| |||| |||||| ||||||||||    
T  29790975 caactaggtcatttatttagggacggagggagtaa 29790941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 1580893 - 1581027
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  1580893 tcgatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagt 1580992  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||| |||| |||||| ||||||||||    
T  1580993 caactaggtcatttattcagggacggagggagtaa 1581027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 40013776 - 40013651
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40013776 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 40013677  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  40013676 tcatttattaagggacggagggagta 40013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 1581439 - 1581547
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtac 236  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||||| |||| |||||||||||||||| | |||||||||||||    
T  1581439 agtaataaaatgtgtactacttggtcccacttgtaaaaatgagtaataagtaaattatttttgtttaatgatgtaaagatagtgggacatatttaagtac 1581538  T
Q  237 ttttcattg 245  Q
    |||||||||    
T  1581539 ttttcattg 1581547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 45081937 - 45081810
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45081937 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 45081838  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    | || |||| |||||| |||||||||||    
T  45081837 ttatttatttagggacggagggagtaat 45081810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 8351008 - 8351141
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8351008 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcactggtacgtgtgtcagagt 8351107  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||||||| |||  |||| |||||| |||||||||    
T  8351108 caactagatcacttatttagggacggagggagta 8351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 30290049 - 30289924
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  30290049 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactagg 30289950  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  30289949 tcatttatttagggacggagggagta 30289924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 38845288 - 38845200
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||    
T  38845288 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 38845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 2805612 - 2805737
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||    
T  2805612 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactggg 2805711  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  2805712 tcatttatttagggacggagggagta 2805737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 245
Target Start/End: Original strand, 43976593 - 43976702
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagta 235  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| ||||| |||| ||||| |||| |||||||||||||||| |  |||||||||||    
T  43976593 gagtaataaaatgtgtactacttggtcccacttgtaaaaaggagtaataggtcaattgtttttgtttaatgatgtaaagatagtgggatatatttaagta 43976692  T
Q  236 cttttcattg 245  Q
    ||||||||||    
T  43976693 cttttcattg 43976702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 38739782 - 38739654
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  38739782 tatttttaaaatattaaatttttataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 38739683  T
Q  115 tcatctattgagggacagagggagtaata 143  Q
    |||| |||| | |||| ||||||||||||    
T  38739682 tcatttatttaaggacggagggagtaata 38739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 43066259 - 43066127
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43066259 tcgatgaatatttttaaaatattaaatttttataattttttt-agtaaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 43066161  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||| |||| |||||| |||| ||||    
T  43066160 caactaggtcatttatttagggacggaggtagta 43066127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 3293273 - 3293363
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||| |||||| |||||||||    
T  3293273 agtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactagatcatttatttagggacggagggagta 3293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 45253839 - 45253749
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgt-gtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||    
T  45253839 gtagagaattgaagatatcaaaaataaaacatatgcattggtacgtgtcgtcggagtcaactagatcatctattaagggacagagggagta 45253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 14522508 - 14522391
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||    
T  14522508 gaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgttaaaatcaact 14522409  T
Q  112 aggtcatctattgaggga 129  Q
    || |||||||||||||||    
T  14522408 agatcatctattgaggga 14522391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 30380655 - 30380530
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||     
T  30380655 tatttttaaaatattaaatttttttaattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattaga 30380556  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||  |||| |||||| |||||||||    
T  30380555 tcacttatttagggacggagggagta 30380530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 37710024 - 37709899
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  37710024 tatttttaaaatattaaatttttataagtttttttaatagagaattgaagatatcaaagataaaacatatacattggtatgtgtgttagagtcaactagg 37709925  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  37709924 tcatttatttagggacggagggagta 37709899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 12532469 - 12532360
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||||| || ||| |||||||| | ||| || ||||||||||||| |||| |||||||||||||||| | ||| |||||||    
T  12532469 ggagtaataaaatgtgtactacttgatcacacctgtaaaaatgagtaataagtaaattatttttgtttaatgatgtaaagatagtgggacatgtttaagt 12532370  T
Q  235 acttttcatt 244  Q
    ||||||||||    
T  12532369 acttttcatt 12532360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 886239 - 886322
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagag 134  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |  |||||||||    
T  886239 gtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaaccaggtcatctaatatgggacagag 886322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 14523308 - 14523205
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtactt 238  Q
    ||||||||| || |||||||||||||||||||||||| | ||| || ||||||||||||| |||| ||||||||||||||||   |||||||||||||||    
T  14523308 taataaaatatgcactacttggtcccacttgtaaaaaggagtaatatgtaaattatttttgtttaatgatgtaaagatagtggaacatatttaagtactt 14523209  T
Q  239 ttca 242  Q
    ||||    
T  14523208 ttca 14523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 2986428 - 2986339
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||| || ||| |||||||||    
T  2986428 agtagagaattgaagatatcaa-gataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttattcagagacggagggagta 2986339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 12893664 - 12893559
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||  |||        ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  12893664 tcgatgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcggagt 12893565  T
Q  107 caacta 112  Q
    ||||||    
T  12893564 caacta 12893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 14847295 - 14847210
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||||||  ||||||||    
T  14847295 agaattaaagatatcaaagataaaacatatgcattggtgcgtgtgtcggaatcaactaggtcatctatcgagggacgtagggagta 14847210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 44123801 - 44123692
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||  |||        ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  44123801 gaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaact 44123702  T
Q  112 aggtcatcta 121  Q
    || |||||||    
T  44123701 agatcatcta 44123692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 31127978 - 31128069
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||| || |  |||||||||| |||||||    
T  31127978 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaaatcatttaatatgggacagaggaagtaata 31128069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 23248902 - 23248794
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| |||||||||||||||||||||||||| ||  ||||| |||||||||||||    
T  23248902 tatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattgatatatgtgttagagtcaactagg 23248803  T
Q  115 tcatctatt 123  Q
    |||| ||||    
T  23248802 tcatttatt 23248794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 39361250 - 39361158
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtc 107  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  39361250 tatttttaaaatattaaatttttataaaattttttagtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagtc 39361158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 18809364 - 18809273
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||| || |  ||||  ||||||||||||    
T  18809364 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaactcaactagatcatttaatatgggatggagggagtaata 18809273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 10658068 - 10657998
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatct 120  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||| |||||||    
T  10658068 agtagagaattgaagatatcaaagataaaacatatgtgttggtacatgtgtcggagtcaactaagtcatct 10657998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 11854612 - 11854521
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||  |||||||||| || | || |  ||||| ||||||||||||    
T  11854612 tagagaattgaagatatcaaaaataaaatatatgcattggtacgtgtgtcgaagtcaactagatcgtttaatatgggacggagggagtaata 11854521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 9302486 - 9302595
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||  |||        ||| ||||||||||||||||||||||||||||||| ||||  || ||||| ||||||||| |    
T  9302486 gaatatttttaaaatattaaattttcataaatttttttagttgagaattgaagatatcaaagataaaacatatacatttatatgtgtgccagagtcaatt 9302585  T
Q  112 aggtcatcta 121  Q
    ||||||||||    
T  9302586 aggtcatcta 9302595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 25256424 - 25256356
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    ||||||||||||||||||||||||||||||||| ||||||||||   ||||| ||||||||||| ||||    
T  25256424 agtagagaattgaagatatcaaagataaaacatttgcattggtataagtgtcggagtcaactagatcat 25256356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 23764623 - 23764713
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacg-tgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| ||||||  |||||||||| | || ||| ||||||| ||| |||||    
T  23764623 gtagagaattgaatatatcaaatataaaacatatgcattggtacgttgtgtcgaagtcaactagattatttatcgagggacggagagagta 23764713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 12796029 - 12795972
Alignment:
Q  188 aaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    ||||||||||| |||| |||||||||| ||||| | | ||||||||||||||||||||    
T  12796029 aaattatttttgtttaatgatgtaaagttagtggggcctatttaagtacttttcattg 12795972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 42785986 - 42785917
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||| |||| ||| ||| |||||||||  |||||||||||||  |||||| |||||||||||||||||||    
T  42785986 tagataattaaagttattaaagataaataatatgcattggtatatgtgtctgagtcaactaggtcatcta 42785917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 6471071 - 6471106
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6471071 gtcaactaggtcatctattaagggacagagggagta 6471106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 7603495 - 7603563
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||| |||||||||| ||  ||||||| ||||||||||| |||||| | ||||||| ||||||||    
T  7603495 aaagataaaaaatatgcattgata--tgtgtcatagtcaactaggccatctaataagggacaaagggagta 7603563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 10536953 - 10537028
Alignment:
Q  62 aagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagaggga 137  Q
    ||||||| |||||||||| ||||| || ||||  ||||||||| |||| ||||||||||| | |||||| ||||||    
T  10536953 aagatattaaagataaaaaatatgaatcggtatatgtgtcagaatcaattaggtcatctaataagggacggaggga 10537028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 25173843 - 25173902
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||| |||||||||||| |||||||||||||||| ||||||| | ||| |||| ||||||    
T  25173843 tagaaaattgaagatattaaagataaaacatatgtattggtatgcgtgacagaatcaact 25173902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 79
Target Start/End: Original strand, 6470784 - 6470813
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaa 79  Q
    ||||||||||||||||||||||||||||||    
T  6470784 agtagagaattgaagatatcaaagataaaa 6470813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 5423462 - 5423502
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    |||| ||||||||||||| |||||| |||||||||||||||    
T  5423462 ggagcaataaaatgtgtattacttgttcccacttgtaaaaa 5423502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 14522605 - 14522641
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagtaa 141  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  14522605 gtcaactaggtcatctattaagggacggagggagtaa 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 42373926 - 42373962
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  42373926 taataaaatgtgtactatttgatcccacttgtaaaaa 42373962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 18360101 - 18360234
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18360101 tcgatgaatatttttaaaatattgaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagt 18360200  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||| |||||||||    
T  18360201 caactaggtcatctattgagggacggagggagta 18360234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 36602827 - 36602694
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36602827 tcgatgaatatttttaaaatattgaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagt 36602728  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||| |||||||||    
T  36602727 caactaggtcatctattgagggacggagggagta 36602694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 23256068 - 23255934
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||||||||||| |||        ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  23256068 tcgatgaatatttttaaaatattgaatttttataatttattttagtagagaattgaagatatcaaatataaaatatatgcattggtacgtgtgtcagagt 23255969  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||||||||||||||| ||||||||||    
T  23255968 caactaggtcatctattgagggacggagggagtaa 23255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 39786485 - 39786619
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39786485 tcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagt 39786583  T
Q  107 caactaggtcatctattgagggacagagggagtaat 142  Q
    |||||||||||||||||||||||| |||||||||||    
T  39786584 caactaggtcatctattgagggacggagggagtaat 39786619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 4209453 - 4209358
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataaa 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  4209453 agtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagtaataaa 4209358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 5123290 - 5123418
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||| |||        |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5123290 gaatatttttaaaatattaaatttttataattttttttagtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 5123389  T
Q  112 aggtcatctattgagggacagagggagta 140  Q
    | ||||||||||||||||  |||||||||    
T  5123390 aagtcatctattgagggatggagggagta 5123418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 44991908 - 44991798
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||| |||||||||||||||| | |||||||||||    
T  44991908 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaggagtaataggtaaattatttttgtttaatgatgtaaagatagtgggacatatttaagt 44991809  T
Q  235 acttttcattg 245  Q
    | |||||||||    
T  44991808 atttttcattg 44991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 3901275 - 3901400
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3901275 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 3901374  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  3901375 tcatttatttagggacggagggagta 3901400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 4264259 - 4264130
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4264259 tatttttaaaatattaaatttttataattttttttactagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 4264160  T
Q  115 tcatctattgagggacagagggagtaataa 144  Q
    |||| ||||||||||| |||||||||||||    
T  4264159 tcatttattgagggacggagggagtaataa 4264130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 46212486 - 46212611
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46212486 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 46212585  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  46212586 tcatttatttagggacggagggagta 46212611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 55190847 - 55190975
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||| |||        | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55190847 gaatatttttaaaatattaaatttttataattttttttaatagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaact 55190946  T
Q  112 aggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||| |||| ||||    
T  55190947 aggtcatctattgagggacggaggaagta 55190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 12191472 - 12191582
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |  || || ||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  12191472 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaggaataatatgtaaattatttttgtttaatgatgtaaagatagtgagacatatttaagt 12191571  T
Q  235 acttttcattg 245  Q
    | |||||||||    
T  12191572 atttttcattg 12191582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 40445715 - 40445821
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||| |||| |||||||||||||||| |||||||||||||    
T  40445715 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaggagtaataggtaaatcatttttgtttaatgatgtaaagatagtgggccatatttaagt 40445814  T
Q  235 acttttc 241  Q
    | |||||    
T  40445815 atttttc 40445821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 46803721 - 46803631
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||    
T  46803721 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 46803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 28166399 - 28166274
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  28166399 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 28166300  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  28166299 tcatttatttagggacggagggagta 28166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 45198476 - 45198601
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  45198476 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 45198575  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  45198576 tcatttatttagggacggagggagta 45198601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 26205840 - 26205971
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||     
T  26205840 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaga 26205939  T
Q  115 tcatctattgagggacagagggagtaataaaa 146  Q
    |||| |||| |||||| ||||||||| |||||    
T  26205940 tcatttatttagggacggagggagtattaaaa 26205971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 3442515 - 3442605
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||| |||||||||    
T  3442515 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagta 3442605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 47579377 - 47579287
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||| |||||||||    
T  47579377 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacggagggagta 47579287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 5735396 - 5735271
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  5735396 tatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 5735297  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  5735296 tcatttatttagggacggagggagta 5735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 7738947 - 7739080
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  7738947 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattgatacgtgtgtcggagt 7739046  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||| |||| |||||| || ||||||    
T  7739047 caactaggtcatttatttagggacggatggagta 7739080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 39260260 - 39260391
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  39260260 tcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaatatatgtattggtacatgtgtcagagt 39260358  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||||||| |||||||||||||||| |||||||||    
T  39260359 caactagatcatctattgagggac-gagggagta 39260391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 6494713 - 6494586
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  6494713 tatttttaaaatattaaatttttataaatttttttagtagagaattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactagg 6494614  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    |||| |||| |||||| |||| ||||||    
T  6494613 tcatttatttagggacggaggaagtaat 6494586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 28152116 - 28151993
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28152116 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactagg 28152017  T
Q  115 tcatctattgagggacagagggag 138  Q
    |||| |||| | |||| |||||||    
T  28152016 tcatttatttaaggacggagggag 28151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 5744219 - 5744344
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  5744219 tatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactagg 5744318  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  5744319 tcatttatttagggacggagggagta 5744344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 21859055 - 21859180
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  21859055 tatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagg 21859154  T
Q  115 tcatctattgagggacagagggagta 140  Q
    | || |||| |||||| |||||||||    
T  21859155 ttatttatttagggacggagggagta 21859180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 21914918 - 21915043
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  21914918 tatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagg 21915017  T
Q  115 tcatctattgagggacagagggagta 140  Q
    | || |||| |||||| |||||||||    
T  21915018 ttatttatttagggacggagggagta 21915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 50033148 - 50033039
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||  |||        |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50033148 gaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 50033049  T
Q  112 aggtcatcta 121  Q
    | ||||||||    
T  50033048 aagtcatcta 50033039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 19634021 - 19634109
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||  ||||||||    
T  19634021 tagagaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcggagtcaactagatcatctattaagggacgaagggagta 19634109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 32409470 - 32409578
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtac 236  Q
    |||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| ||||||||||||| || | ||| |||||||||    
T  32409470 agtaataaaatgtgtactacttagtcccacttgtaaaaatgagtaataggtaaattacttttgtttaatgatgtaaagataatgtgtcatgtttaagtac 32409569  T
Q  237 ttttcattg 245  Q
    |||||||||    
T  32409570 ttttcattg 32409578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 37688169 - 37688289
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||     
T  37688169 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcatctaga 37688268  T
Q  115 tcatctattgagggacagagg 135  Q
    |||| |||| |||||| ||||    
T  37688269 tcatttatttagggacggagg 37688289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 19731336 - 19731407
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19731336 agtagagcattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatcta 19731407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 25644447 - 25644356
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  ||||||||||||||||||    
T  25644447 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacagagggagtaata 25644356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 38068458 - 38068553
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatattta 231  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||||| |||| |||||||||||||||| | ||||||||    
T  38068458 gagtaataaaatgtgtactacttggtcccacttgtaaaaaggagtaatatgtaaattatttttctttaatgatgtaaagatagtgggacatattta 38068553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 3443515 - 3443617
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3443515 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcagagt 3443614  T
Q  107 caa 109  Q
    |||    
T  3443615 caa 3443617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 42187107 - 42187225
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  42187107 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaatatatgcattggtacgtatgtcagagt 42187206  T
Q  107 caactaggtcatctattga 125  Q
    ||||||  |||||||||||    
T  42187207 caactaaatcatctattga 42187225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 19170711 - 19170800
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||| ||| |||||    
T  19170711 gtagagaattgaagatattaaagataaaatatatgcattggtacatgtgtcgaagtcaactaggtcatctattgagggacggagcgagta 19170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 19652427 - 19652516
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||| ||||||||||| |||| ||||    
T  19652427 gtagagaattgaagatatcaaagataaaacatatgaattggtacgtatgtcggagtcaactagatcatatattgagggacggaggaagta 19652516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 51175474 - 51175574
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    |||||| ||||||||||||||||||||| |||||||||||| | ||| |||||||||||||||  |||| |||||||||||||||| | |||||||||||    
T  51175474 ggagtactaaaatgtgtactacttggtcgcacttgtaaaaaggagtaataggtaaattattttcgtttaatgatgtaaagatagtgggacatatttaagt 51175573  T
Q  235 a 235  Q
    |    
T  51175574 a 51175574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 1377122 - 1377047
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattga 125  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||    
T  1377122 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcatagtcaactacgtcatttattga 1377047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 49768570 - 49768447
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||| |    
T  49768570 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatatgtatgtcatagtcaactaag 49768471  T
Q  115 tcatctattgagggacagagggag 138  Q
    |||| |||| |||||| |||||||    
T  49768470 tcatttatttagggacggagggag 49768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 19631396 - 19631327
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  19631396 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaattaagtcatcta 19631327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 50035667 - 50035558
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||  |||        ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  50035667 gaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaact 50035568  T
Q  112 aggtcatcta 121  Q
    || |||||||    
T  50035567 agatcatcta 50035558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 19525885 - 19525953
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  19525885 agtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcat 19525953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 6923113 - 6923179
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  6923113 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcat 6923179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 23603825 - 23603880
Alignment:
Q  57 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23603825 aattgaagatatcaaagataaaacagatgcattggtacgtgtgtcagagtcaacta 23603880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 31767965 - 31767883
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagt 219  Q
    |||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||| |||| | ||||||| |||||    
T  31767965 agtaataaaatgtgtactacttagtcccacttgtaaaaatgagtaataggtaaattatttttgtttaatcatgtaaatatagt 31767883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 50971592 - 50971491
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  50971592 tcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattaaatatatcaaa-ataaaacatatgcattggtacgtgtgtcagagt 50971494  T
Q  107 caa 109  Q
    |||    
T  50971493 caa 50971491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 20678758 - 20678843
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagg 135  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||  |||||||||||||||||| |||| |||| |||||| ||||    
T  20678758 agtagagaattgaaaatatcaaagataaaatatatgcattgatatatgtgtcagagtcaactagatcatttatttagggacggagg 20678843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 53568444 - 53568380
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    |||| |||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  53568444 agtaaagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcggagtcaactagg 53568380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 55014345 - 55014281
Alignment:
Q  57 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  55014345 aattgaatatatcaaagataaaacatatgcattagtacgtgtgtcggagtcaactaggttatcta 55014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 55997202 - 55997146
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtca 108  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  55997202 tagagaattgaagatatcaaagataaaacgtatgcattggtacgtgtgtcggagtca 55997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 26659928 - 26659862
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    |||||||||||||||||||||| ||||||||||||| || ||| |||||| ||||||||||||||||    
T  26659928 tagagaattgaagatatcaaagctaaaacatatgcagtgatacatgtgtcggagtcaactaggtcat 26659862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 45832267 - 45832162
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtac 236  Q
    |||||||||||||||||||||||||||||||| ||||||   ||| || ||||||||||||| ||||   |||||||||||||    |||||||||||||    
T  45832267 agtaataaaatgtgtactacttggtcccacttttaaaaagcagtaataagtaaattatttttgttta---atgtaaagatagtagaacatatttaagtac 45832171  T
Q  237 ttttcattg 245  Q
     ||||||||    
T  45832170 ctttcattg 45832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 51737130 - 51737195
Alignment:
Q  56 gaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||||| |||| |||||||||||||||||||||||||||||||| |||||||| |||| |||||    
T  51737130 gaattgaaaatataaaagataaaacatatgcattggtacgtgtgtcggagtcaacaaggttatcta 51737195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 39195672 - 39195743
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||||| | ||||||  |||||||||    
T  39195672 aaagataaaaaatatgcattgatatgtgtgtcagagtcaactaggtcatctaataagggacgaagggagtaa 39195743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 14958078 - 14958027
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  14958078 aaagatataaaatatgcattggtatgtgtgtcagagtcaactaggtcatcta 14958027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 10181076 - 10181017
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||| ||||||| |||| |||||||||||||||| ||||||| ||||| |||||||||||    
T  10181076 tagataattgaaaatattaaagataaaacatatgtattggtatgtgtgacagagtcaact 10181017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 31486364 - 31486305
Alignment:
Q  62 aagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||| ||| |||||| ||||||||| ||| |||||| ||||||||||||||||||||    
T  31486364 aagatattaaaaataaaagatatgcattagtatgtgtgttagagtcaactaggtcatcta 31486305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 13665855 - 13665798
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcatt 244  Q
    |||||||||||| |||| ||||| |||| ||||| | |||||||||||||||||||||    
T  13665855 taaattatttttgtttaatgatgcaaagttagtggggcatatttaagtacttttcatt 13665798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 13678712 - 13678655
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcatt 244  Q
    |||||||||||| |||| ||||| |||| ||||| | |||||||||||||||||||||    
T  13678712 taaattatttttgtttaatgatgcaaagttagtggggcatatttaagtacttttcatt 13678655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 39719016 - 39719098
Alignment:
Q  142 taaaatgtgtactacttg----gtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtg 220  Q
    ||||||||||||||||||    |||||||||||||||| |  || ||| |||||||||||| |||| | ||||||||||||||    
T  39719016 taaaatgtgtactacttgagtagtcccacttgtaaaaatgaataatagataaattatttttgtttaataatgtaaagatagtg 39719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 17058900 - 17058848
Alignment:
Q  192 tatttttatttattgatgtaaagatagtgagccatatttaagtacttttcatt 244  Q
    ||||||| |||| |||||||||||||||| | | |||||||||||||||||||    
T  17058900 tatttttgtttaatgatgtaaagatagtggggcctatttaagtacttttcatt 17058848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 27976744 - 27976780
Alignment:
Q  53 agagaattgaagatatcaaagataaaacatatgcatt 89  Q
    |||||||||||||||| ||||||||||||||||||||    
T  27976744 agagaattgaagatattaaagataaaacatatgcatt 27976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 39194000 - 39193941
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    ||||||||  ||||||| |||||||||| |||||||||| ||  ||||||||||||||||    
T  39194000 tagagaatgaaagatattaaagataaaagatatgcattgatatatgtgtcagagtcaact 39193941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 38068090 - 38068148
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||||| |||| |||||||||| ||||| | | ||||||||||||||| ||||    
T  38068090 taaattatttttgtttaatgatgtaaagttagtggggcctatttaagtactttttattg 38068148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 38068420 - 38068450
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||||||||    
T  38068420 taataaaatgtgtactacttggtcccacttg 38068450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 38168226 - 38168168
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||||| |||| |||||||||  ||||| | | ||||||||||||||||||||    
T  38168226 taaattatttttgtttaatgatgtaaaattagtggggcttatttaagtacttttcattg 38168168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 51175437 - 51175467
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||||||||    
T  51175437 taataaaatgtgtactacttggtcccacttg 51175467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 56228599 - 56228561
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  56228599 agtaataaaatatgtactacttggccccacttgtaaaaa 56228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 12191433 - 12191465
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||| |||||||||||||||||||||||||    
T  12191433 agtaatataatgtgtactacttggtcccacttg 12191465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 44991947 - 44991915
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||||||||||||||| |||||||||||||    
T  44991947 agtaataaaatgtgtactatttggtcccacttg 44991915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 4924966 - 4925099
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4924966 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagggt 4925065  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||| |||||||||    
T  4925066 caactaggtcatctattgagggacggagggagta 4925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 35290419 - 35290286
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35290419 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtacgtgtgtcagagt 35290320  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||| |||||||||    
T  35290319 caactaggtcatctattgagggacggagggagta 35290286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 37516234 - 37516143
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  37516234 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagtaa 37516143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 39036543 - 39036410
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39036543 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatacattggtacgtgtgtcagagt 39036444  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||| ||||||||||||| ||| |||||||||    
T  39036443 caactatgtcatctattgagagacggagggagta 39036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 5213050 - 5213183
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5213050 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagt 5213149  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||  |||| |||||| |||||||||    
T  5213150 caactaggtcacttattcagggacggagggagta 5213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 32334815 - 32334904
Alignment:
Q  54 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  32334815 gagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacagagggagtaata 32334904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 37843747 - 37843826
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 130  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37843747 gtagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 37843826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 35448168 - 35448258
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||    
T  35448168 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 35448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 42148432 - 42148306
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  42148432 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 42148333  T
Q  115 tcatctattgagggacagagggagtaa 141  Q
    |||| |||| |||||| ||||||||||    
T  42148332 tcatttatttagggacggagggagtaa 42148306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 29627393 - 29627268
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  29627393 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactagg 29627294  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  29627293 tcatttatttagggacggagggagta 29627268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 38698088 - 38697963
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38698088 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattagg 38697989  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  38697988 tcatttatttagggacggagggagta 38697963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 40512816 - 40512941
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40512816 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 40512915  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||  |||| |||||| |||||||||    
T  40512916 tcacttatttagggacggagggagta 40512941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 41411330 - 41411419
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||    
T  41411330 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaagtcatctattgagggacggagggagta 41411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 43517188 - 43517309
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| | ||||| |||        ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  43517188 tcgatgaatatttttaaaatattaattttttataattttttttagtagagaattgatgatatcaaagataaaacatatgcattagtacgtgtgtcagagt 43517287  T
Q  107 caactaggtcatctattgaggg 128  Q
    ||||||||||||||||||||||    
T  43517288 caactaggtcatctattgaggg 43517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 23988669 - 23988578
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||||||    
T  23988669 agtagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaa 23988578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 1830743 - 1830653
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||| ||||||||||    
T  1830743 gtagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagtaa 1830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 30779916 - 30780009
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  30779916 agtagtgaattgaagatatgaaagataaaacatatgtattggtacgtgtgtcggagtcaactaggtcatctattgaggaacggagggagtaata 30780009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 40316210 - 40316121
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||| |||||||||    
T  40316210 gtagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 40316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 5364545 - 5364421
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5364545 tatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 5364446  T
Q  115 tcatctattgagggacagagggagt 139  Q
    |||  |||| |||||| ||||||||    
T  5364445 tcacttatttagggacggagggagt 5364421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 14475406 - 14475485
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 130  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  14475406 gtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactaggtcatctattaagggac 14475485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 39894906 - 39894781
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||     
T  39894906 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactaga 39894807  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||  |||| |||||| |||||||||    
T  39894806 tcacttatttagggacggagggagta 39894781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 19889744 - 19889654
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |  | |||||||||||||    
T  19889744 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactaggtcctctaatatgagacagagggagta 19889654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 32002150 - 32002275
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||     
T  32002150 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaagtaga 32002249  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| | |||| |||||||||    
T  32002250 tcatttatttaaggacggagggagta 32002275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 42421775 - 42421704
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  42421775 agtagagaattgaagatatcaaagataaaacatatgcataggtacgtgtgtcggagtcaactagatcatcta 42421704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 8517065 - 8516952
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtac 236  Q
    ||||||||||||||||||| ||||||| |||||||||||   ||||||| |||||||||||| |||| ||||||||||||||||   ||||||||||||     
T  8517065 agtaataaaatgtgtactatttggtcctacttgtaaaaagtagtagtagataaattatttttgtttaatgatgtaaagatagtggaacatatttaagtat 8516966  T
Q  237 ttttcattgtagtt 250  Q
    |||| |||| ||||    
T  8516965 tttttattggagtt 8516952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 4300005 - 4300071
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  4300005 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcat 4300071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 16048171 - 16048105
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  16048171 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcat 16048105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 25563633 - 25563519
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||| | ||||||||||||||||||||||||||||||||||| ||||||||   |||    
T  25563633 tcgatgaatatttttaaaatattaaatttttataatttgttttagtataaaattgaagatatcaaagataaaacatatgcattggaacgtgtgttgaagt 25563534  T
Q  107 caactaggtcatcta 121  Q
    |||||||||||||||    
T  25563533 caactaggtcatcta 25563519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 43067314 - 43067226
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  ||||| |||| |||||||    
T  43067314 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggaggaagtaata 43067226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 970226 - 970135
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||| || |  | ||| ||||||||||||    
T  970226 tagagaattgaagataacaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaata 970135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 16954749 - 16954690
Alignment:
Q  81 atatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  16954749 atatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggacggagggagta 16954690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 39405852 - 39405761
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||| |||| || |  ||||| ||||||||||||    
T  39405852 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtctcgaagtcaactagatcatttaatatgggacggagggagtaata 39405761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 22613882 - 22613948
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  22613882 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtctaagtcaactagatcat 22613948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 19087946 - 19088012
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  19087946 agaattgaagatatcataaataaaacttatgcattggtacgtgtgtcggagtcaactacgtcatcta 19088012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 19868856 - 19868918
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 112  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  19868856 agtagacaattgaaaatagcaaagataaaacatatgcattggtacgtgtgtcggagtcaacta 19868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 2864044 - 2863971
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctatt 123  Q
    ||||||||||||||||||||||||||||| | |||  |||||||| |||| | ||||||||||| |||||||||    
T  2864044 agtagagaattgaagatatcaaagataaagcgtatatattggtacatgtgacggagtcaactagatcatctatt 2863971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 15268198 - 15268129
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||||||||||| ||| ||||||||||||||||  |||||||||| ||||||||||  |||||||    
T  15268198 tagagaattgaagatattaaaaataaaacatatgcattaatacgtgtgtcggagtcaactaaatcatcta 15268129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 15958856 - 15958817
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15958856 gagtaataaaatgtgtactacttggtcccacttgtaaaaa 15958817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 24520296 - 24520242
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtc 107  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||| |||||    
T  24520296 tagagaattgaagatatcaaa-ataaaacatatacattgatacgtgtgtcggagtc 24520242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 21961315 - 21961256
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||| |||| ||||||| |||||||||||||||| |||| || ||||| |||||||||||    
T  21961315 tagataattaaagatattaaagataaaacatatgaattgatatgtgtgacagagtcaact 21961256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 4898193 - 4898251
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||||| | || | |||||||| ||||||| | ||||||||||||||||||||    
T  4898193 taaattatttttgtataataatgtaaagctagtgagacttatttaagtacttttcattg 4898251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 14475265 - 14475225
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagtaataaa 145  Q
    ||||||||||||||||||||| |||| ||||||||| ||||    
T  14475265 gtcaactaggtcatctattgaaggacggagggagtactaaa 14475225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 15958896 - 15958864
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||| ||||||    
T  15958896 agtaataaaatgtgtactacttggtctcacttg 15958864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 37304358 - 37304406
Alignment:
Q  92 tacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||    
T  37304358 tacgtgtatcagagtcaactaggtcacttattcagggacggagggagta 37304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 37843610 - 37843574
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagtaa 141  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  37843610 gtcaagtaggtcatctattgagggacggagggagtaa 37843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 584022 - 584128
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtactt 238  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  584022 taataaaatgtgtactacttggtctcacttgtaaaaaagagtagtaggtaaattatttttgtttaatgatgtaaagatagtgagacatatttaagtactt 584121  T
Q  239 ttcattg 245  Q
    |||||||    
T  584122 ttcattg 584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 21392151 - 21392018
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21392151 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 21392052  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||||||| ||||||||||| ||||||||||||||    
T  21392051 caactagatcatctattgaaggacagagggagta 21392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 19072894 - 19072765
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  19072894 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactagg 19072795  T
Q  115 tcatctattgagggacagagggagtaataa 144  Q
    |||| |||| |||||| |||||||||||||    
T  19072794 tcatttatttagggacggagggagtaataa 19072765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 31466486 - 31466619
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31466486 tcgatgaatatttttaaaatattaaatttttataattttttttagtatagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 31466585  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||  |||| |||||| |||||||||    
T  31466586 caactaggtcacttatttagggacggagggagta 31466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 36819821 - 36819696
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36819821 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 36819722  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  36819721 tcatttatttagggacggagggagta 36819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 42086774 - 42086899
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42086774 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 42086873  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||  |||||||||    
T  42086874 tcatttatttagggatggagggagta 42086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 23474102 - 23474230
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23474102 gaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaact 23474201  T
Q  112 aggtcatctattgagggacagagggagta 140  Q
    ||||||  |||| |||||| || ||||||    
T  23474202 aggtcacttatttagggacggaaggagta 23474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 47081105 - 47080979
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47081105 tatttttaaaatattaaatttttataattttttttagtagagaatttaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 47081006  T
Q  115 tcatctattgagggacagagggagtaa 141  Q
    ||||  ||| |||||| ||||||||||    
T  47081005 tcattcatttagggacggagggagtaa 47080979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 2400410 - 2400285
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  2400410 tatttttaaaatattaaatttttataatattttttagtagagaatggaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactagg 2400311  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  2400310 tcatttatttagggacggagggagta 2400285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 28185544 - 28185669
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  28185544 tatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagg 28185643  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  28185644 tcatttatttagggacggagggagta 28185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 37951081 - 37951206
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37951081 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgcgtcagagtcaactagg 37951180  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| | |||| |||||||||    
T  37951181 tcatttatttatggacggagggagta 37951206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 47713638 - 47713763
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47713638 tatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 47713737  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||  |||| |||||| |||||||||    
T  47713738 tcacttatttagggacggagggagta 47713763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 48531455 - 48531326
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  48531455 tcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagt 48531356  T
Q  107 caactaggtcatctattgagggacagaggg 136  Q
    ||||||  ||||||||||||| || |||||    
T  48531355 caactaaatcatctattgaggaacggaggg 48531326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 36905651 - 36905524
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||      
T  36905651 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaaa 36905552  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    |||| |||| |||||| |||||||||||    
T  36905551 tcatttatttagggacggagggagtaat 36905524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 43786637 - 43786740
Alignment:
Q  138 gtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtact 237  Q
    |||||||||||||||||| |||||| |||||||||||| | ||| || ||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  43786637 gtaataaaatgtgtactatttggtctcacttgtaaaaaggagtaatatgtaaattatttttgtttaatgatgtaaagatagtgagacatatttaagtact 43786736  T
Q  238 tttc 241  Q
    ||||    
T  43786737 tttc 43786740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 44479891 - 44479981
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||| |||| ||||    
T  44479891 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggaggaagta 44479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 32619078 - 32619203
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |    
T  32619078 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaaaataaaacatatgcattgatatgtgtgtcagagtcaactaag 32619177  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  32619178 tcatttatttagggacggagggagta 32619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 36859344 - 36859469
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  36859344 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgttagagtcaattagg 36859443  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| ||| || |||||||||    
T  36859444 tcatttatttaggaacggagggagta 36859469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 47538056 - 47537933
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |    
T  47538056 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtatatcagaat 47537957  T
Q  107 caactaggtcatctattgagggac 130  Q
    ||| ||| |||| |||||||||||    
T  47537956 caattagatcatttattgagggac 47537933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 31110755 - 31110625
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||||||||  |  |||||||||||    
T  31110755 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgcattg--agatgtgtcagagt 31110658  T
Q  107 caactaggtcatctattgagggacagagggagt 139  Q
    |||||||||||| |||| |||||| ||||||||    
T  31110657 caactaggtcatttatttagggacggagggagt 31110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 44592048 - 44592157
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    |||||||||||||||||||||||||||| || ||||||||| | ||| || |||||||||| || |||| ||||||||||||| || | |||||||||||    
T  44592048 ggagtaataaaatgtgtactacttggtcgcatttgtaaaaatgagtaatatgtaaattattgttgtttaatgatgtaaagataatgggacatatttaagt 44592147  T
Q  235 acttttcatt 244  Q
    ||||||||||    
T  44592148 acttttcatt 44592157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 10464288 - 10464379
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||| || |  ||||| ||||||||||||    
T  10464288 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagtcaactatatcatttaatatgggacggagggagtaata 10464379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 37231737 - 37231828
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  ||||| ||||||||||||    
T  37231737 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaata 37231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 2842510 - 2842620
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||||| |||||||||||||||   ||| || ||||||||||||| |||| ||||||| |||||||| | ||||||||| |    
T  2842510 ggagtaataaaatgtgtactacttgatcccacttgtaaaaataagtaatatgtaaattatttttgtttaatgatgtacagatagtgggacatatttaaat 2842609  T
Q  235 acttttcattg 245  Q
    | |||||||||    
T  2842610 atttttcattg 2842620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 34478182 - 34478272
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || || |  ||||| |||||||||    
T  34478182 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggttatttaatatgggacggagggagta 34478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 48557910 - 48558019
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||| |||||||||||||||||| |||||| | ||| |||||||||||||||| || | |||||||||||||||| |   |||||||||    
T  48557910 ggagtaataaaatgtatactacttggtcccacttctaaaaatgagtaataggtaaattatttttgttcaatgatgtaaagatagtgcg-attatttaagt 48558008  T
Q  235 acttttcattg 245  Q
    |||||||||||    
T  48558009 acttttcattg 48558019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 42834420 - 42834553
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||||||||||||||||| |||||||| |||| ||| |||    
T  42834420 tcgatgaatatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatacattggtatgtgtatcaaagt 42834519  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||| |||||||| |||| || ||| |||||||||    
T  42834520 caaataggtcatttatttagagacggagggagta 42834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 35500920 - 35501011
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||| || |  ||||| ||||||||||||    
T  35500920 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagttaactagatcatttaatatgggacggagggagtaata 35501011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 31497874 - 31497965
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| ||||| |  ||||| ||||||||||    
T  31497874 agtagataattgaagatatcaaagataaaacatatgtattagtatgtgtgtcggagtcaactaggttatctaatatgggaccgagggagtaa 31497965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 36643250 - 36643184
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||||    
T  36643250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaattagatcat 36643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 4612263 - 4612348
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||| |||||| |||||||||||||  |||||||||||||||| |||||| |||| ||||||  ||||||||    
T  4612263 agaattgaagatatcaaacataaaatatatgcattggtatttgtgtcagagtcaactgggtcatttatttagggacgtagggagta 4612348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 8515683 - 8515582
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||    || ||||||||||| |||| ||||||||||| |||| | |||||||||||    
T  8515683 ggagtaataaaatgtgtattacttggtcccacttgtaaaaaggagt----ggaaaattatttttgtttaatgatgtaaagacagtgggacatatttaagt 8515588  T
Q  235 actttt 240  Q
    | ||||    
T  8515587 attttt 8515582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 47713774 - 47713840
Alignment:
Q  74 ataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||  |||| |||||| |||||||||    
T  47713774 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 27916684 - 27916613
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||| |||||  || ||||||||||||||||    
T  27916684 agtagataattgaagatatcaaaaataaaacatatacattggtacatgtgttggactcaactaggtcatcta 27916613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 18795268 - 18795362
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtc 101  Q
    |||| |||||||||||||||||| ||||||  |||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  18795268 tcgatgaatatttttaaaatattaaattttcataattttttttagtagagaatttaagatatcaaagataaaacatatacattagtacgtgtgtc 18795362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 4033379 - 4033301
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 130  Q
    |||| |||| || |||| |||||||||| |||||||||| || ||||||||||||||||||| ||||||| | ||||||    
T  4033379 tagataattaaatatattaaagataaaaaatatgcattgatatgtgtgtcagagtcaactagatcatctaataagggac 4033301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 42493806 - 42493896
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataaa 145  Q
    |||||| ||||||| |||||||||| |||| ||||| || ||||| |||||||||||  ||||| || |  ||||||||||||||||||||    
T  42493806 agaattaaagatattaaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcatttaatatgggacagagggagtaataaa 42493896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 2450777 - 2450712
Alignment:
Q  52 tagagaattgaagatatcaaagataaaa-catatgcattggtacgtgtgtcagagtcaactaggtc 116  Q
    ||||||||||||||||| |||||||||| |||||||||||||||  ||||| |||| |||||||||    
T  2450777 tagagaattgaagatattaaagataaaaacatatgcattggtacaggtgtcggagtaaactaggtc 2450712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 38198556 - 38198500
Alignment:
Q  65 atatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||| |||||||||| |||||||||| || |||| ||||||||||||||||||||||    
T  38198556 atattaaagataaaaaatatgcattgatatgtgtatcagagtcaactaggtcatcta 38198500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 33613286 - 33613235
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||| ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  33613286 aaagttaaaacatatgcattggtatgcgtgtcggagtcaactaggtcatcta 33613235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 39982242 - 39982341
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| ||         | ||||||||||||||||| ||||||||||||||||||||  || ||||| ||||||    
T  39982242 tcgatgaatatttttaaaatattaaatttttatatatttttctaatagagaattgaagatattaaagataaaacatatgcattattatgtgtgacagagt 39982341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 29770602 - 29770708
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||  |||        | ||||| ||||||||||||||| |||||| |||||||| ||||||| ||||  |||    
T  29770602 tcgatgaatatttttaaaatattaaattttcataattttttttaatagagcattgaagatatcaaaaataaaaaatatgcatcggtacgtatgtcgaagt 29770701  T
Q  107 caactag 113  Q
    |||||||    
T  29770702 caactag 29770708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 8488801 - 8488744
Alignment:
Q  188 aaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    ||||||||||| |||| |||||||||||||||| | |||||||||||| |||| ||||    
T  8488801 aaattatttttgtttaatgatgtaaagatagtgggacatatttaagtattttttattg 8488744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 8488874 - 8488834
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  8488874 ggagtaataaaatgtgtattacttgatcccacttgtaaaaa 8488834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 34478043 - 34478005
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  34478043 gtcaactaggtcatttattgagggacggagggagtaata 34478005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 48557873 - 48557903
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||||||||    
T  48557873 taataaaatgtgtactacttggtcccacttg 48557903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 583979 - 584011
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||||||| |||||||||||||||||||||    
T  583979 agtaataaaatatgtactacttggtcccacttg 584011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 43786595 - 43786627
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||||||||| |||||||||||||||||||    
T  43786595 agtaataaaatgtatactacttggtcccacttg 43786627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 44592009 - 44592041
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||||||||||||||||||||| |||||||    
T  44592009 agtaataaaatgtgtactacttggttccacttg 44592041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 47841253 - 47841325
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaat 142  Q
    |||||||||| |||||||||||||  |||||||||||||  ||| ||||||| |   ||||| ||||||||||    
T  47841253 aaagataaaaaatatgcattggtatatgtgtcagagtcagttagatcatctaatataggacaaagggagtaat 47841325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 48767866 - 48767906
Alignment:
Q  205 tgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||| ||||||| |||||||||| |||||||||||    
T  48767866 tgatgtaaagttagtgagacatatttaagcacttttcattg 48767906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 136 - 245
Target Start/End: Original strand, 49650068 - 49650177
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagta 235  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  49650068 gagtaataaaatgtgtactacttggtcccacttgtaaaaatgagtaataggtaaattatttttgtttaatgatgtaaagatagtgagacatatttaagta 49650167  T
Q  236 cttttcattg 245  Q
    ||||||||||    
T  49650168 cttttcattg 49650177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 25531911 - 25531777
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25531911 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 25531812  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||| |||| |||||| ||||||||||    
T  25531811 caactaggtcatttatttagggacggagggagtaa 25531777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 26991915 - 26991806
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagta 235  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26991915 gagtaataaaatgtgtactacttggtcccacttgtaaaaaggagtaatatgtaaattatttttgtttaatgatgtaaagatagtgagacatatttaagta 26991816  T
Q  236 cttttcattg 245  Q
    ||||||||||    
T  26991815 cttttcattg 26991806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 32565879 - 32565746
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32565879 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagagaaaacatatgcattggtacgtgtgtcagagt 32565780  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||| |||||||||||| |||| |||||||||    
T  32565779 caactaagtcatctattgaaggacggagggagta 32565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 30529178 - 30529311
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  30529178 tcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagt 30529277  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||| ||||||||||| |||||||||    
T  30529278 caactaggtcatttattgagggacggagggagta 30529311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 35718976 - 35718867
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagta 235  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||| |||| | | |||||||||||||| ||||||||||||    
T  35718976 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagagtaataagtaaattatttttgtttaataaagtaaagatagtgagacatatttaagta 35718877  T
Q  236 cttttcattg 245  Q
    ||||||||||    
T  35718876 cttttcattg 35718867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 48219778 - 48219903
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48219778 tatttttaaaatattaaatttttataattatttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 48219877  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  48219878 tcatttatttagggacggagggagta 48219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 48264947 - 48265074
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  48264947 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 48265046  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    |||| |||| |||||| |||||||||||    
T  48265047 tcatttatttagggacggagggagtaat 48265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 30627271 - 30627166
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtactt 238  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||| |||||||||||||||| | |||||||||||| ||    
T  30627271 taataaaatgtgtactacttggtcccacttgtaaaaatgagtaataggtaaattatttttgtttaatgatgtaaagatagtgggacatatttaagtattt 30627172  T
Q  239 ttcatt 244  Q
    ||||||    
T  30627171 ttcatt 30627166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 37281225 - 37281092
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||| |||||||||||| ||||||| ||| || |||||||||    
T  37281225 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatataaaagataaaacacatgcatttgtatgtttgtcagagt 37281126  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||| ||||||||    
T  37281125 caactaggtcatctattgagggacaaagggagta 37281092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 39354400 - 39354525
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39354400 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 39354499  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| ||||||  ||||||||    
T  39354500 tcatttatttagggacgtagggagta 39354525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 50539385 - 50539260
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  50539385 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 50539286  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  50539285 tcatttatttagggacggagggagta 50539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 12705335 - 12705224
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattat-ttttatttattgatgtaaagatagtgagccatatttaag 233  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||| |||| |||| |||||||| ||||||||| ||||||||||    
T  12705335 ggagtaataaaatgtgtactatttggtcccacttgtaaaaatgagtaataggtaaattattttttgtttaatgatgtaatgatagtgagacatatttaag 12705236  T
Q  234 tacttttcattg 245  Q
    ||||||||||||    
T  12705235 tacttttcattg 12705224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 50876489 - 50876362
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  50876489 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactagg 50876390  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    |||| |||| |||||| |||||||||||    
T  50876389 tcatttatttagggacggagggagtaat 50876362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 32988485 - 32988611
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32988485 tatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 32988584  T
Q  115 tcatctattgagggacagagggagtaa 141  Q
    |||| |||| || ||| ||||||||||    
T  32988585 tcatttatttagagacggagggagtaa 32988611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 38458819 - 38458729
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||| ||||    
T  38458819 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggaggaagta 38458729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 48376244 - 48376158
Alignment:
Q  54 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||||||||    
T  48376244 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagttaactaggtcatctattgaagaacagagggagta 48376158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 52379079 - 52378989
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| |||||| |||||||||    
T  52379079 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 52378989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 23569846 - 23569935
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||| |||||||||    
T  23569846 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttattgagggacggagggagta 23569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 3529303 - 3529176
Alignment:
Q  13 aatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 112  Q
    ||||||||||||||||| ||||||  |||        |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3529303 aatatttttaaaatattaaattttcataaattgttttagtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 3529204  T
Q  113 ggtcatctattgagggacagagggagta 140  Q
    | ||||  ||| |||||| |||||||||    
T  3529203 gatcattaattaagggacggagggagta 3529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 29161932 - 29161842
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||||    
T  29161932 agtagaaaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcagagtcaactagatcatttattgagggatagaggaagta 29161842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 45234973 - 45235083
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45234973 tcgatgaatatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 45235072  T
Q  107 caactaggtca 117  Q
    |||||| ||||    
T  45235073 caactaagtca 45235083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 45468124 - 45468014
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||| |||||||| |||||||| | ||| |||||||||||||||| |||| |||||||||||||||| | ||||||||| |    
T  45468124 ggagtaataaaatgtgtactactcggtcccacctgtaaaaaggagtaataggtaaattatttttgtttaatgatgtaaagatagtgggacatatttaaat 45468025  T
Q  235 acttttcattg 245  Q
    | |||||||||    
T  45468024 atttttcattg 45468014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 47676012 - 47675909
Alignment:
Q  142 taaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttc 241  Q
    |||||||||||||||||| ||||||||||||||| | ||| ||||||||||| |||| |||| |||||||||||||||| | |||||||||||| |||||    
T  47676012 taaaatgtgtactacttgatcccacttgtaaaaaggagtaataggtaaattacttttgtttaatgatgtaaagatagtgggacatatttaagtatttttc 47675913  T
Q  242 attg 245  Q
    ||||    
T  47675912 attg 47675909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 16751581 - 16751695
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||  |||        || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  16751581 tcgatgaatatttttaaaatattaaattttcataattgtgtttagaagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagt 16751680  T
Q  107 caactaggtcatcta 121  Q
    |||||||||||||||    
T  16751681 caactaggtcatcta 16751695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 4605083 - 4605002
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagaggg 136  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||    
T  4605083 agaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactagatcatctatcgagggacggaggg 4605002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 49805428 - 49805517
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataa 144  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |||||| |||||||| ||||    
T  49805428 agaattgaagatatcaaagataaaacatatgcattggtatgtttgtcagagtcaactagatcatttatttagggacggagggagtgataa 49805517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 31971515 - 31971631
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||  |||        |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  31971515 tcgatgaatatttttaaaatattaaattttcataattttttttagtagagagttgaatatatcaaagataaaacatatgcattggtacatgtgtcagagt 31971614  T
Q  107 caactaggtcatctatt 123  Q
    ||||||| |||||||||    
T  31971615 caactagatcatctatt 31971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 47222304 - 47222236
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47222304 agtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcat 47222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 50481366 - 50481278
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |  ||||| |||||||||    
T  50481366 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggaatcaactaagtcatctaatatgggacggagggagta 50481278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 38738153 - 38738220
Alignment:
Q  54 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38738153 gagaattgaacatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatcta 38738220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 16265121 - 16265030
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  | ||| ||||||||||||    
T  16265121 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaata 16265030  T

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Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 16266250 - 16266159
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  ||||| |||||| |||||    
T  16266250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggaataata 16266159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 26441725 - 26441634
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  || || ||||||||||||    
T  26441725 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatggaacggagggagtaata 26441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 43680157 - 43680066
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||| |||| || |  ||||| ||||||||||||    
T  43680157 tagagaattgaagatatcaaagataaaacatatgcattggtacgcgtgtcgaagtcaactagatcatttaatatgggacggagggagtaata 43680066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 42708594 - 42708532
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  42708594 agtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaacta 42708532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 3898744 - 3898835
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||| || |  ||||| ||||||||||||    
T  3898744 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtctgtcgaagtcaactagatcatttaatatgggacggagggagtaata 3898835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 24982439 - 24982348
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||| |||| || |  | ||| ||||||||||||    
T  24982439 tagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaata 24982348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 1849789 - 1849726
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactag 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  1849789 agtatagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactag 1849726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 41501779 - 41501828
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41501779 agtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtg 41501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 14075818 - 14075754
Alignment:
Q  57 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| | |||||||    
T  14075818 aattgaagatatcaaatataaaacatatgcattggtatgtgtgtcggagtcaactcgatcatcta 14075754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 23330540 - 23330471
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| | |||| || |||||||| |||||||    
T  23330540 tagagaattgaagatatgaaagataaaacatatgcattgatacatatgtcggaatcaactagatcatcta 23330471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 21034703 - 21034772
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||| ||||||||||||||||||||||| | || |||| ||||||| ||||||| || |||||||    
T  21034703 tagagaattaaagatatcaaagataaaacatataccttagtacatgtgtcaaagtcaaccagatcatcta 21034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 30627314 - 30627282
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||||||||||    
T  30627314 agtaataaaatgtgtactacttggtcccacttg 30627282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 30796686 - 30796724
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  30796686 agtaataaaatgtgtactacttagtctcacttgtaaaaa 30796724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 46688847 - 46688790
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||||| | || |||||||||| ||||| ||| ||||||||||||||||||||    
T  46688847 taaattatttttgtataatgatgtaaagttagtgggcc-tatttaagtacttttcattg 46688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 31698761 - 31698830
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||| |||| || |||| |||||| ||| |||||||||| || ||||||||||||||||||  |||||||    
T  31698761 tagataattaaatatattaaagattaaatatatgcattgatatgtgtgtcagagtcaactaaatcatcta 31698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 12705374 - 12705342
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||| ||||||    
T  12705374 agtaataaaatgtgtactacttggtctcacttg 12705342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 23340881 - 23340812
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||| ||||||||||||||||| ||||||||  ||| |||  |||||||||| |||||||||| || |||||    
T  23340881 agtatagaattgaagatatcaacgataaaac--atgtattattacgtgtgtcggagtcaactaagttatcta 23340812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 26991955 - 26991923
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||| ||||||||||||||||    
T  26991955 agtaataaaatgtgtattacttggtcccacttg 26991923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 35719016 - 35718984
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||| |||||||||||||||||||||||||||    
T  35719016 agtaacaaaatgtgtactacttggtcccacttg 35718984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 49650028 - 49650060
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||||||||||||||||||| |||||||||    
T  49650028 agtaataaaatgtgtactacttgatcccacttg 49650060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 25097315 - 25097449
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25097315 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgttagagt 25097414  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    |||||| |||||||||||||| || ||||||||||    
T  25097415 caactaagtcatctattgaggtacggagggagtaa 25097449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 46483641 - 46483551
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  46483641 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggatggagta 46483551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 136 - 245
Target Start/End: Original strand, 55222350 - 55222459
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagta 235  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  55222350 gagtaataaaatgtgtactacttggtcccacttgtaaaaatgagtaataggtaaattatttttgtttaatgatgtaaagatagtgagacatatttaagta 55222449  T
Q  236 cttttcattg 245  Q
     |||||||||    
T  55222450 attttcattg 55222459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 29728226 - 29728361
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  29728226 tcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagt 29728325  T
Q  107 caactaggtcatctattgagggacagagggagtaat 142  Q
    |||||||||||| ||||||||||| |||||||||||    
T  29728326 caactaggtcatttattgagggacggagggagtaat 29728361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 27849084 - 27848950
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||    
T  27849084 tcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcaaagt 27848986  T
Q  107 caactaggtcatctattgagggacagagggagtaat 142  Q
    ||||||||||||||| |||||||| |||||||||||    
T  27848985 caactaggtcatctaatgagggacggagggagtaat 27848950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 32285304 - 32285426
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||| ||| |||        |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32285304 tcgatgaatatttttaaaatattaaatctttataagtttttttagtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagt 32285403  T
Q  107 caactaggtcatctattgaggga 129  Q
    |||||||||| ||||||||||||    
T  32285404 caactaggtcgtctattgaggga 32285426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 7459956 - 7460081
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7459956 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 7460055  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||| ||||    
T  7460056 tcatttatttagggacggaggaagta 7460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 21907121 - 21906992
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  21907121 tatttttaaaatattaaatttttataattttttttactagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 21907022  T
Q  115 tcatctattgagggacagagggagtaataa 144  Q
    |||| ||||||||||| |||||||||||||    
T  21907021 tcatttattgagggacggagggagtaataa 21906992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 38492184 - 38492052
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38492184 tcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagt 38492086  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||  |||| |||||| |||||||||    
T  38492085 caactaggtcacttattcagggacggagggagta 38492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 34827409 - 34827322
Alignment:
Q  53 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||    
T  34827409 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 34827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 10571280 - 10571402
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  10571280 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagg 10571379  T
Q  115 tcatctattgagggacagaggga 137  Q
    |||| ||| ||||||| ||||||    
T  10571380 tcatttatcgagggacggaggga 10571402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 37833025 - 37832899
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  37833025 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagtcaactatg 37832926  T
Q  115 tcatctattgagggacagagggagtaa 141  Q
    |||| |||| |||||| ||||||||||    
T  37832925 tcatttatttagggacggagggagtaa 37832899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 51392430 - 51392548
Alignment:
Q  17 tttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtc 116  Q
    ||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  51392430 tttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtc 51392529  T
Q  117 atctattgagggacagagg 135  Q
    || |||| |||||||||||    
T  51392530 atttatttagggacagagg 51392548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 8559141 - 8559266
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  8559141 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 8559240  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| || ||||||    
T  8559241 tcatttatttagggacggatggagta 8559266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 18659177 - 18659052
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  18659177 tatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 18659078  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  18659077 tcatttatttagggacggagggagta 18659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 43137976 - 43137851
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||     
T  43137976 tatttttaaaatattaaatttttataattatttttagtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 43137877  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  43137876 tcatttatttagggacggagggagta 43137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 49057945 - 49057856
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||| |||| ||||    
T  49057945 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattgagggacggaggaagta 49057856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 53066462 - 53066375
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  53066462 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaacta-gtcatctattgagggacggagggagta 53066375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 54840304 - 54840389
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||  |||||||||    
T  54840304 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 54840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 10437415 - 10437295
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  10437415 tcgatgaatatttttaaaatattaaatttttataagtttttttagtaaagaattgaagatatcaaagataaaacatataaattggtacgtgtgtcagagt 10437316  T
Q  107 caactaggtcatctattgagg 127  Q
    |||||| |||||||| |||||    
T  10437315 caactaagtcatctactgagg 10437295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 15503113 - 15503025
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||| |||||||||    
T  15503113 tagagaattgaatatatcaaagataaaacatatgcattgatacgtatgtcggagtcaattaggtcatctattgagggacggagggagta 15503025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 38833754 - 38833674
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||    
T  38833754 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggac 38833674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 47638188 - 47638060
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |    
T  47638188 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtacgtgtatcagaat 47638089  T
Q  107 caactaggtcatctattgagggacagagg 135  Q
    ||| || ||||||||||||| ||| ||||    
T  47638088 caattaagtcatctattgagtgacggagg 47638060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 51062480 - 51062400
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||    
T  51062480 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggac 51062400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 45167387 - 45167316
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  45167387 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 45167316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 1327401 - 1327311
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||| |||| |||||| |||||||||    
T  1327401 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtaagagtcaactagatcatttatttagggacggagggagta 1327311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 3547591 - 3547681
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |  ||||| |||||||||    
T  3547591 agtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaattaggtcatctaatatgggacggagggagta 3547681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 45093807 - 45093739
Alignment:
Q  53 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  45093807 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaaatcatcta 45093739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 9145592 - 9145521
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9145592 agtagaaaattcaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatcta 9145521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 28690606 - 28690535
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28690606 agtagagcattgaagatatcaaagataaaacatatgcattggtatgtgtgtcggagtcaactaggtcatcta 28690535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 19611096 - 19611207
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagc-gtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaag 233  Q
    |||| |||||||||||||||| |||||| |||||||  |||||  ||| || ||||||||||||| |||| |||||||||||||||| | ||||||||||    
T  19611096 ggagcaataaaatgtgtactatttggtctcacttgtttaaaaggagtaataagtaaattatttttgtttaatgatgtaaagatagtgggacatatttaag 19611195  T
Q  234 tacttttcattg 245  Q
    ||||||||||||    
T  19611196 tacttttcattg 19611207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 35718026 - 35718097
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35718026 agtagaaaattgaagatatcaaggataaaacatatgcattggtacgtgtgtcagagtcaactaaatcatcta 35718097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 48707014 - 48707105
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||  |||  |||| |||||| ||||||||||    
T  48707014 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagaatcaactaaatcacttatttagggacggagggagtaa 48707105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 3935885 - 3935775
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||| ||||||| ||| || | ||| |||||| | ||| ||| |||||||||||| |||| ||||||||||||| |||| |||||||||||    
T  3935885 ggagtaataaaatatgtactatttgatctcccttataaaaaggagtaatagataaattatttttgtttaatgatgtaaagataatgagacatatttaagt 3935786  T
Q  235 acttttcattg 245  Q
    |||||||||||    
T  3935785 acttttcattg 3935775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 52668660 - 52668746
Alignment:
Q  54 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||| ||||||||||||||| |||||||||| || ||||||||||| |||||||||||| |||| |||||| |||||||||    
T  52668660 gagaattgaaaatatcaaagataaaatatatgcattgatatgtgtgtcagagccaactaggtcatttatttagggacggagggagta 52668746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 17052997 - 17052861
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||  |||        | |||| |||||||||||||||||||||||||||||||||||||||||||||  |||    
T  17052997 tcgatgaatatttttaaaatattaaattttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 17052898  T
Q  107 caactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||| |||| || |  | ||| ||||||||||||    
T  17052897 caactagatcatttaatatgagacggagggagtaata 17052861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 4238793 - 4238884
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| || |  || || ||||||||||||    
T  4238793 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatggaacggagggagtaata 4238884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 7671484 - 7671555
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || ||| || ||||||||||||||||    
T  7671484 agtagagaattgaagatatcaaagataaaacatatgcattgatacatgcgtctgaatcaactaggtcatcta 7671555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 32951309 - 32951400
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||| |||| || |  ||||| ||||||||||||    
T  32951309 tagagaattgaagataccaaagataaaacatatgcattggtatgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaata 32951400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 10435222 - 10435156
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  10435222 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcat 10435156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 36665107 - 36665038
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||    
T  36665107 tagagaaatgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaattaagtcatcta 36665038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 16365449 - 16365508
Alignment:
Q  81 atatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  16365449 atatgcattggtacgtgtgtcagagtcaactagatcgtctattgagggacagagagagta 16365508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 52550797 - 52550879
Alignment:
Q  60 tgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaat 142  Q
    |||||||||| ||||||||||||||||||| |||||| |||| |||||||||| |||||||| |  ||||| ||| |||||||    
T  52550797 tgaagatatcgaagataaaacatatgcattagtacgtatgtcggagtcaactaagtcatctaatatgggacggagagagtaat 52550879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 39435228 - 39435297
Alignment:
Q  72 agataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    |||||||| ||||| |||||||  ||||||||| |||||||||||||||| | |||||| ||||||||||    
T  39435228 agataaaaaatatgtattggtatatgtgtcagaatcaactaggtcatctaataagggacggagggagtaa 39435297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 47142759 - 47142817
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||||| |||| |||||||||| ||||||| | |||||||||| |||||||||    
T  47142759 taaattatttttgtttagtgatgtaaagttagtgagacctatttaagtagttttcattg 47142817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 23059106 - 23059163
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcatt 244  Q
    |||||||||||| |||| ||||| |||| ||||| | |||||||||||||||||||||    
T  23059106 taaattatttttgtttaatgatgcaaagttagtggggcatatttaagtacttttcatt 23059163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 48143854 - 48143787
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    |||| ||||||||| |||||||||||||| |||||| ||||||| | ||||| ||||||||||| ||||    
T  48143854 agtacagaattgaa-atatcaaagataaaccatatgtattggtatgagtgtcggagtcaactagatcat 48143787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 5992329 - 5992251
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtg 220  Q
    ||||||||| |||  || ||||| ||||||||||||| |   ||||  ||||||||||||||||| ||||||||||||||||    
T  5992329 taataaaatatgttatatttggttccacttgtaaaaatg---agtatataaattatttttatttaatgatgtaaagatagtg 5992251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 1151685 - 1151627
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    |||||||||||| |||| |||||||||| ||||| | | ||||||||||||||| ||||    
T  1151685 taaattatttttgtttaatgatgtaaagttagtggggcctatttaagtactttttattg 1151627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 19611059 - 19611089
Alignment:
Q  139 taataaaatgtgtactacttggtcccacttg 169  Q
    |||||||||||||||||||||||||||||||    
T  19611059 taataaaatgtgtactacttggtcccacttg 19611089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 1292507 - 1292544
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaa 172  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  1292507 ggagtaataaaatgtgtactacttgatcccacatgtaa 1292544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 3935923 - 3935886
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaa 174  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  3935923 agtaataaaatgtgtactacttaatcccacttgtaaaa 3935886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 53066596 - 53066637
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagtaataaaa 146  Q
    ||||||||| ||||||||| |||||| |||||||||||||||    
T  53066596 gtcaactagatcatctattaagggacggagggagtaataaaa 53066637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 1292468 - 1292500
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttg 169  Q
    ||||||||||||||||||| |||||||||||||    
T  1292468 agtaataaaatgtgtactaattggtcccacttg 1292500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 8e-39; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 643559 - 643692
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  643559 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 643658  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||| |||| |||||| |||||||||    
T  643659 caactaggtcatttatttagggacggagggagta 643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 11114690 - 11114563
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  11114690 tatttttaaaatattaaatttttataattttttttagtagagaatcgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactagg 11114591  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    |||| ||||||||||| |||||||||||    
T  11114590 tcatttattgagggacggagggagtaat 11114563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 30237256 - 30237165
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaa-catatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30237256 agtagagaatcgaagatatcaaagataaaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 30237165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 13207125 - 13207218
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataa 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||    
T  13207125 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctaatgtaggacggagagagtaataa 13207218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 33121631 - 33121542
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||| |||||||||    
T  33121631 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattaagggacggagggagta 33121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 18992036 - 18991904
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18992036 tcgatgaatatttttaaaatattaaatttttataattttttt-agtagaaaattgaagatatcaaaaataaaacatatgcattggtacgtgtgtcagagt 18991938  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||  |||| |||||| |||||||||    
T  18991937 caactaggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 31854943 - 31854816
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||    
T  31854943 tatttttaaaatattaaatttttataattttttataatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactggg 31854844  T
Q  115 tcatctattgagggacagagggagtaat 142  Q
    |||| |||| |||||| |||||||||||    
T  31854843 tcatttatttagggacggagggagtaat 31854816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 24150866 - 24150741
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24150866 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagagtcaactagg 24150767  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| ||| || || ||||||    
T  24150766 tcatttatttaggaacggatggagta 24150741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 25435544 - 25435412
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| ||||||||||||||||||  |||||| |||        |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  25435544 tcgatgaatatttttaaaatattatatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtca-agt 25435446  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||||||| |||| |||||||| || |||||||||    
T  25435445 caactagatcatttattgaggaacggagggagta 25435412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 29986294 - 29986394
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29986294 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 29986393  T
Q  115 t 115  Q
    |    
T  29986394 t 29986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 22020364 - 22020293
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  22020364 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 22020293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 29403734 - 29403641
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||| | |||| ||| ||||||||    
T  29403734 agtagagaattgaagatatcaaagataaaacatacgcattggtatgtgtgtcagagtcaactaagtcatttattaaaggacggagagagtaata 29403641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 7098009 - 7098134
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  7098009 tatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 7098108  T
Q  115 tcatctattgagggacagagggagtaataa 144  Q
    ||    ||| |||||| |||||||||||||    
T  7098109 tc----atttagggacggagggagtaataa 7098134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 17096526 - 17096442
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagt 219  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||||||    
T  17096526 ggagtaataaaatgtgtactacttagtcccacttgtaaaaaagagtaatagataaattatttttgtttaatgatgtaaagatagt 17096442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 8796140 - 8796046
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataa 144  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| | || |||| |||||| ||| |||||||||    
T  8796140 agtagagaattaaagatatcaaagataaaacatatacattggtatgtgtgtcagagtcaactagatgatttatttagggacggagtgagtaataa 8796046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 20662230 - 20662323
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta-ttgagggacagagggagtaat 142  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||| || ||||||||| |||| ||||||    
T  20662230 agtagagaattgaagatattaaagataaaacatatgcattggtatgtatgtcagaggcaactaggtcatttatttgagggacggaggaagtaat 20662323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 25163251 - 25163186
Alignment:
Q  53 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||    
T  25163251 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaaatcaactagatcat 25163186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 19068939 - 19069010
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||||||| || |||| ||||| ||||||||    
T  19068939 agtagagaactgaagatatcaaagataaaatatatgtattggtacgtgtatcggagttaactaagtcatcta 19069010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 19687609 - 19687668
Alignment:
Q  186 gtaaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    ||||||||||||| |||| ||||||||||||| || | ||||||||||||||||||||||    
T  19687609 gtaaattatttttgtttaatgatgtaaagatactgggacatatttaagtacttttcattg 19687668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 16434701 - 16434791
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaat 142  Q
    |||| |||| ||||||| |||||||| | ||||||||||||| | ||||| ||||||||||| ||||||| |  ||||| |||||||||||    
T  16434701 tagataattaaagatattaaagataagaaatatgcattggtatgagtgtctgagtcaactagttcatctaatatgggacggagggagtaat 16434791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 19687414 - 19687451
Alignment:
Q  138 gtaataaaatgtgtactacttggtcccacttgtaaaaa 175  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  19687414 gtaataaaatgtgtactacttggtctcacttgtaaaaa 19687451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 16696051 - 16696016
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||| |||||||||    
T  16696051 gtcaactaggtcatctattgagggacggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 7443019 - 7443152
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7443019 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 7443118  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||  |||| |||||| |||||||||    
T  7443119 caactaggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 41463651 - 41463777
Alignment:
Q  13 aatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 112  Q
    ||||||||||||||||| ||||||  |||        |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41463651 aatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaacta 41463750  T
Q  113 ggtcatctattgagggacagagggagt 139  Q
    |||||| ||||||||||| ||||||||    
T  41463751 ggtcatttattgagggacggagggagt 41463777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 23671501 - 23671376
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23671501 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 23671402  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  23671401 tcatttatttagggacggagggagta 23671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 14372167 - 14372077
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||    
T  14372167 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 14372077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 9877211 - 9877344
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| ||||||| |||||||||| ||||||| |||        ||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||    
T  9877211 tcgatgaatattgttaaaatattaaatttttataatattttttagtagagaattaaagatatcaaagataaaacatatgcattcacacgtgtgtcagagt 9877310  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||| |||||||||    
T  9877311 caactaggtcatctattgagggacggagggagta 9877344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 18718364 - 18718239
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18718364 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactagg 18718265  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  18718264 tcatttatttagggacggagggagta 18718239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 30708861 - 30708728
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30708861 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagt 30708762  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||  |||| || ||| |||||||||    
T  30708761 caactaggtcacttattcagagacggagggagta 30708728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 32776072 - 32776161
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| |||||||||    
T  32776072 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactaggtcatctattaagggacggagggagta 32776161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 34827037 - 34826912
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||||||||||| |||        | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  34827037 tatttttaaaatattgaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactagg 34826938  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  34826937 tcatttatttagggacggagggagta 34826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 42038648 - 42038523
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42038648 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 42038549  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||  |||| |||||| |||||||||    
T  42038548 tcacttatttagggacggagggagta 42038523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 14707670 - 14707792
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14707670 tatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 14707769  T
Q  115 tcatctattgagggacagaggga 137  Q
    |||| |||| |||||| ||||||    
T  14707770 tcatttatttagggacggaggga 14707792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 40425420 - 40425510
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||| |||||||||    
T  40425420 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagta 40425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 3987368 - 3987493
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||     
T  3987368 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaga 3987467  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  3987468 tcatttatttagggacggagggagta 3987493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 41172893 - 41173018
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  41172893 tatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaagtagg 41172992  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  41172993 tcatttatttagggacggagggagta 41173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 44283413 - 44283541
Alignment:
Q  13 aatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 112  Q
    ||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  44283413 aatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagaatcaacta 44283512  T
Q  113 ggtcatctattgagggacagagggagtaa 141  Q
    |||||| |||| | |||| ||||||||||    
T  44283513 ggtcatttatttaaggacggagggagtaa 44283541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 12184683 - 12184793
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||| |||||||| |||| ||||| ||||||||||| ||| |||||||||||| ||| |||| |||||||||||||||| | |||||||||||    
T  12184683 ggagtaataaattgtgtactgcttgatcccatttgtaaaaaagagtaataggtaaattatatttgtttaatgatgtaaagatagtgggacatatttaagt 12184782  T
Q  235 acttttcattg 245  Q
    |||||||||||    
T  12184783 acttttcattg 12184793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 4045361 - 4045494
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4045361 tcgatgaatatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 4045460  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    |||| |  |||| |||| |||||| |||||||||    
T  4045461 caaccaaatcatttatttagggacggagggagta 4045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 28967739 - 28967631
Alignment:
Q  137 agtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtac 236  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||| || ||||||||||||| |||| ||||||||||||| ||   |||||||||||||    
T  28967739 agtaataaaatgtatactacttggtcccacttgtaaaaatgagtaatatgtaaattatttttgtttaatgatgtaaagataatggaacatatttaagtac 28967640  T
Q  237 ttttcattg 245  Q
    |||||||||    
T  28967639 ttttcattg 28967631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 10624774 - 10624889
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||| |||||||||||||||| |||| | |||||||||||||| |  ||||||||||    
T  10624774 ggagtaataaaatgtgtactacttgctcccacttataaaaaggagtaataggtaaattatttttgtttaataatgtaaagatagtgggatatatttaagt 10624873  T
Q  235 acttttcattgtagtt 250  Q
    |||||| |||| ||||    
T  10624874 acttttaattggagtt 10624889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 44330472 - 44330401
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  44330472 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 44330401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 14332483 - 14332369
Alignment:
Q  135 ggagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttatttattgatgtaaagatagtgagccatatttaagt 234  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||| |||| ||||||||||||| ||   ||||||||||     
T  14332483 ggagtaataaaatgtgtactacttagtcccacttgtaaaaatgagtaataggtaaattatttttgtttaatgatgtaaagatactggaacatatttaagc 14332384  T
Q  235 acttttcattgtagt 249  Q
    || ||||||| ||||    
T  14332383 acatttcattatagt 14332369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 16941947 - 16942077
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||     
T  16941947 tatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 16942046  T
Q  115 tcatctattgagggacagagggagtaataaa 145  Q
    |||| |||| || ||| |||| |||| ||||    
T  16942047 tcatttatttagcgacggaggaagtactaaa 16942077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 17012612 - 17012742
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||     
T  17012612 tatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaga 17012711  T
Q  115 tcatctattgagggacagagggagtaataaa 145  Q
    |||| |||| || ||| |||| |||| ||||    
T  17012712 tcatttatttagcgacggaggaagtactaaa 17012742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 20517509 - 20517419
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| |||| || ||| |||||||||    
T  20517509 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattatgtcatttatttagagacggagggagta 20517419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 24283129 - 24283222
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataa 144  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||  |||||||||||||||||||||||| |||||| ||||||    
T  24283129 agtagagaattgaagatatcaaagataaaacatatgcatcagtacgtgtgtcggaaacaactaggtcatctattgagggac-gagggattaataa 24283222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 27559700 - 27559575
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        | ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||     
T  27559700 tatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactaga 27559601  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  27559600 tcatttatttagggacggagggagta 27559575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 38963608 - 38963519
Alignment:
Q  51 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| || |||||||||    
T  38963608 gtagagaattgaagaaatcaaagataaaacatatgcattggtacgtgtgtcgaagttaactaggtcatctattaaggaacggagggagta 38963519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 40598216 - 40598125
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |  ||||| ||||||||||||    
T  40598216 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaata 40598125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 4045983 - 4045850
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        |||||| |||| |||||||||||||||||||||||||||| |||||| ||||||| |    
T  4045983 tcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattaaagatatcaaagataaaacatatgcattagtacgtatgtcagaat 4045884  T
Q  107 caactaggtcatctattgagggacagagggagta 140  Q
    ||||||  ||||||||||||| |  |||||||||    
T  4045883 caactaaatcatctattgaggaatggagggagta 4045850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 36199087 - 36199195
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||     
T  36199087 tatttttaaaatattaaatttttataattttttttagtagagaatcgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaga 36199186  T
Q  115 tcatctatt 123  Q
    |||| ||||    
T  36199187 tcatttatt 36199195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 38137701 - 38137772
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  38137701 agtagggaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactagatcatcta 38137772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 40898730 - 40898659
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||||    
T  40898730 agtagagaattgaagatatcaaagataaaacatatacattagtacgtgtgtcggagtcaactagatcatcta 40898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 332366 - 332277
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaa 141  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||||||| ||||||||||| |  ||||| ||||||||||    
T  332366 agtagagaattgaagatatcaaagataaaacatatgcgttggtac--gtgtcggagtcaaataggtcatctaatatgggacggagggagtaa 332277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 13399276 - 13399366
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||| ||| ||||||||||||| |||||||| || || ||||| ||||||    
T  13399276 agtagagaattgaagatataaaaaataaaacgtatgcattggtacatgtatcagagtcaactaagtcatctaatgtggaacagaaggagta 13399366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 39418148 - 39418282
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||  |||        |||||| ||||||||||||||||||||||| ||||| ||||||| |||||||  |||    
T  39418148 tcgatgaatatttttaaaatattaaattttcataattttttttagtagataattgaagatatcaaagataaaatatatgtattggtaagtgtgtcgaagt 39418247  T
Q  107 caactaggtcatctattgagggacagagggagtaa 141  Q
    ||||||| |||||| |||||| |  ||||||||||    
T  39418248 caactagatcatctgttgaggaaaggagggagtaa 39418282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 30776321 - 30776405
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattgg 91  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||||||    
T  30776321 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgg 30776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 38588072 - 38588140
Alignment:
Q  62 aagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggac 130  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| |||| ||||||    
T  38588072 aagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactagatcatttatttagggac 38588140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 4083292 - 4083226
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||| ||||||| ||||||||||||||||||||| || ||||||| ||||||||||| |||||||    
T  4083292 agaattaaagatattaaagataaaacatatgcattgatatgtgtgtcggagtcaactagctcatcta 4083226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 5030462 - 5030515
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctatt 123  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  5030462 aaagataaaaaatatgcattggtatgtgtgtcaaagtcaactaggtcatctatt 5030515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 42951468 - 42951359
Alignment:
Q  12 gaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 111  Q
    |||||||||||||||||| ||||||  |||        |||| ||||| ||| |||||||| ||||||||||| ||||| |||||||||| |||||||||    
T  42951468 gaatatttttaaaatattaaattttcataatttttattagtaaagaatagaaaatatcaaaaataaaacatatacattgatacgtgtgtcggagtcaact 42951369  T
Q  112 aggtcatcta 121  Q
    || |||||||    
T  42951368 agatcatcta 42951359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 43925254 - 43925300
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgt 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  43925254 tagagaattgaagatatcaaagataaaacatatgcattagttcgtgt 43925300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 36749917 - 36749984
Alignment:
Q  136 gagtaataaaatgtgtactacttggtcccacttgtaaaaaagcgtagtaggtaaattatttttattta 203  Q
    ||||||||||||||||||| ||||| ||||||| |||||| | ||| || ||||||||||||| ||||    
T  36749917 gagtaataaaatgtgtactgcttggccccacttataaaaaggagtaatatgtaaattatttttgttta 36749984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 7106368 - 7106329
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcatt 89  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  7106368 agtagataattgaagatagcaaagataaaacatatgcatt 7106329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 20917763 - 20917722
Alignment:
Q  106 tcaactaggtcatctattgagggacagagggagtaataaaat 147  Q
    ||||||||||||| |||| |||||| ||||||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagtaataaaat 20917722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 3703578 - 3703518
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattgta 247  Q
    |||||||||||| |||| |||||||||| ||||| | | ||| ||||||||||| ||||||    
T  3703578 taaattatttttgtttaatgatgtaaagttagtgggacctatataagtactttttattgta 3703518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 25786651 - 25786591
Alignment:
Q  52 tagagaattgaagatatcaaagataaaaca-tatgcattggtacgtgtgtcagagtcaact 111  Q
    ||||||||||||||||| || ||||||| | |||||||||||| ||| | |||||||||||    
T  25786651 tagagaattgaagatattaaggataaaaaaatatgcattggtatgtgggacagagtcaact 25786591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 32775938 - 32775902
Alignment:
Q  105 gtcaactaggtcatctattgagggacagagggagtaa 141  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  32775938 gtcaactgggtcatctattgagggacggagggagtaa 32775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 41388 - 41480
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaat 142  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41388 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagtaat 41480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 14149 - 14054
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagtaataaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||| ||||||||||||||    
T  14149 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcagagtcaactaggtcacttatttagggacggagggagtaataaa 14054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 10518 - 10388
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10518 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactagg 10419  T
Q  115 tcatctattgagggacagagggagtaataaa 145  Q
    |||  |||| |||||| ||||||||||||||    
T  10418 tcacttatttagggacggagggagtaataaa 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 12877 - 12747
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12877 tatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactagg 12778  T
Q  115 tcatctattgagggacagagggagtaataaa 145  Q
    |||  |||| |||||| ||||||||||||||    
T  12777 tcacttatttagggacggagggagtaataaa 12747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 44244 - 44369
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  44244 tatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgcgtgtcagagtcaactagg 44343  T
Q  115 tcatctattgagggacagagggagta 140  Q
    |||| |||| |||||| |||||||||    
T  44344 tcatttatttagggacggagggagta 44369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 15344 - 15481
Alignment:
Q  7 tcgaagaatatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 106  Q
    |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||||   |||| ||||||||||||||||||||| |||||    
T  15344 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaacagtaaatcatatgcattggtacgtgtgttagagt 15443  T
Q  107 caactaggtcatctattgagggacagagggagtaataa 144  Q
    |||||||||||  |||| |||||| |||||||||||||    
T  15444 caactaggtcagttattcagggaccgagggagtaataa 15481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 117446 - 117320
Alignment:
Q  15 tatttttaaaatattgaatttttgtaannnnnnnnagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagg 114  Q
    ||||||||||||||| ||||||| |||        |||| | |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||     
T  117446 tatttttaaaatattaaatttttataattttttttagtaaataattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactaga 117347  T
Q  115 tcatctattgagggacagagggagtaa 141  Q
    |||| |||| |||||| ||||||||||    
T  117346 tcatttatttagggacggagggagtaa 117320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 38531 - 38602
Alignment:
Q  50 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatcta 121  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||  |||||||    
T  38531 agtagataattgaagatatcaaagataaaacatatgcattggtacgtatgtcgaagtcaactaaatcatcta 38602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 33317 - 33259
Alignment:
Q  187 taaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcattg 245  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  33317 taaattatttttatttaatgatgtaaagatagtgagacctatttaagtacttttcattg 33259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 14430 - 14345
Alignment:
Q  55 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    ||||||||||||||||||||||||||||||| ||| ||| || |||| || |||||||| | || ||||||||||| |||||||||    
T  14430 agaattgaagatatcaaagataaaacatatgtattagtaagtatgtcggaatcaactagattatttattgagggaccgagggagta 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 11571 - 11510
Alignment:
Q  183 taggtaaattatttttatttattgatgtaaagatagtgagccatatttaagtacttttcatt 244  Q
    |||||||||||||||| |||| ||||||||||||  || | |||||||||||||||||||||    
T  11571 taggtaaattatttttgtttaatgatgtaaagattatgggacatatttaagtacttttcatt 11510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 12619 - 12660
Alignment:
Q  52 tagagaattgaagatatcaaagataaaacatatgcattggta 93  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  12619 tagagaattgaagatattaacgataaaacatatgcattggta 12660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0568 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0568
Description:

Target: scaffold0568; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 833 - 781
Alignment:
Q  192 tatttttatttattgatgtaaagatagtgagccatatttaagtacttttcatt 244  Q
    ||||||| |||| |||||||||||||||| | | |||||||||||||||||||    
T  833 tatttttgtttaatgatgtaaagatagtggggcctatttaagtacttttcatt 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 1177 - 1245
Alignment:
Q  70 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacagagggagta 140  Q
    |||||||||| |||||||||| ||  ||||||| ||||||||||| |||||| | ||||||| ||||||||    
T  1177 aaagataaaaaatatgcattgata--tgtgtcatagtcaactaggccatctaataagggacaaagggagta 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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