View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1350_low_6 (Length: 623)

Name: NF1350_low_6
Description: NF1350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1350_low_6
NF1350_low_6
[»] chr1 (38 HSPs)
chr1 (46-594)||(5293027-5293568)
chr1 (134-304)||(5181047-5181218)
chr1 (131-241)||(35069862-35069973)
chr1 (166-308)||(39616332-39616476)
chr1 (131-262)||(44615427-44615559)
chr1 (131-262)||(44793010-44793142)
chr1 (131-232)||(23058471-23058573)
chr1 (131-304)||(29936421-29936601)
chr1 (59-124)||(48125763-48125828)
chr1 (131-307)||(49250680-49250857)
chr1 (136-255)||(10778526-10778646)
chr1 (131-304)||(12495015-12495189)
chr1 (219-305)||(13020687-13020773)
chr1 (131-304)||(36187130-36187304)
chr1 (47-124)||(36421698-36421775)
chr1 (137-306)||(16408953-16409122)
chr1 (131-278)||(41476888-41477036)
chr1 (249-304)||(3627907-3627962)
chr1 (188-266)||(13798300-13798379)
chr1 (133-247)||(34085242-34085357)
chr1 (219-306)||(50426563-50426650)
chr1 (131-273)||(51421863-51422006)
chr1 (140-268)||(13692645-13692772)
chr1 (136-301)||(19572425-19572591)
chr1 (131-304)||(34673192-34673366)
chr1 (47-104)||(2581505-2581561)
chr1 (131-196)||(10450078-10450143)
chr1 (140-252)||(19003628-19003741)
chr1 (47-123)||(23719535-23719610)
chr1 (131-262)||(29871237-29871369)
chr1 (48-124)||(39219191-39219267)
chr1 (61-124)||(33293600-33293663)
chr1 (47-124)||(8880380-8880457)
chr1 (131-204)||(12718783-12718856)
chr1 (131-204)||(16237315-16237388)
chr1 (64-97)||(47644966-47644999)
chr1 (220-304)||(24236671-24236755)
chr1 (67-123)||(25181156-25181212)
[»] chr8 (24 HSPs)
chr8 (131-304)||(27777108-27777282)
chr8 (47-234)||(29918538-29918715)
chr8 (130-309)||(43113531-43113711)
chr8 (136-309)||(27932422-27932597)
chr8 (131-263)||(15173831-15173964)
chr8 (208-304)||(11254925-11255021)
chr8 (133-304)||(40248281-40248453)
chr8 (131-232)||(40789593-40789695)
chr8 (131-300)||(14687403-14687573)
chr8 (131-264)||(20399596-20399730)
chr8 (213-305)||(2075743-2075835)
chr8 (47-123)||(5793516-5793592)
chr8 (131-266)||(14155536-14155672)
chr8 (137-304)||(45236075-45236243)
chr8 (150-260)||(6388470-6388581)
chr8 (131-204)||(17469259-17469332)
chr8 (130-215)||(30904049-30904134)
chr8 (220-300)||(17084027-17084107)
chr8 (120-309)||(34777059-34777243)
chr8 (134-252)||(15068550-15068668)
chr8 (61-124)||(17108321-17108384)
chr8 (131-232)||(2183588-2183690)
chr8 (136-252)||(27056517-27056634)
chr8 (67-116)||(36274993-36275042)
[»] chr5 (33 HSPs)
chr5 (133-300)||(29245866-29246034)
chr5 (67-304)||(16311204-16311431)
chr5 (131-204)||(12712569-12712642)
chr5 (131-204)||(12773833-12773906)
chr5 (47-265)||(29664902-29665107)
chr5 (131-252)||(28568984-28569106)
chr5 (131-263)||(2681220-2681353)
chr5 (131-306)||(6155829-6156003)
chr5 (131-198)||(12250974-12251041)
chr5 (133-295)||(12866471-12866634)
chr5 (131-304)||(4920830-4921004)
chr5 (135-232)||(23044974-23045072)
chr5 (133-307)||(4583125-4583300)
chr5 (134-204)||(10822538-10822608)
chr5 (133-294)||(12834495-12834657)
chr5 (133-305)||(15890213-15890385)
chr5 (68-123)||(18451967-18452022)
chr5 (213-308)||(40517893-40517988)
chr5 (131-264)||(5908639-5908773)
chr5 (130-196)||(38006489-38006555)
chr5 (67-124)||(12457468-12457525)
chr5 (62-124)||(16366528-16366591)
chr5 (213-304)||(17853204-17853295)
chr5 (213-304)||(35311900-35311991)
chr5 (71-137)||(40187723-40187790)
chr5 (213-299)||(6092445-6092531)
chr5 (46-104)||(39887202-39887260)
chr5 (131-292)||(40187580-40187741)
chr5 (131-200)||(17153173-17153242)
chr5 (131-300)||(22694817-22694986)
chr5 (131-204)||(32574950-32575023)
chr5 (68-124)||(17153121-17153177)
chr5 (136-200)||(35311831-35311895)
[»] chr7 (32 HSPs)
chr7 (167-304)||(37218050-37218188)
chr7 (130-306)||(45885673-45885850)
chr7 (131-232)||(27063147-27063249)
chr7 (133-303)||(10072477-10072648)
chr7 (131-305)||(12980386-12980561)
chr7 (136-305)||(3226855-3227025)
chr7 (130-304)||(30650639-30650814)
chr7 (131-304)||(3157092-3157265)
chr7 (131-204)||(18683983-18684056)
chr7 (131-199)||(32546201-32546269)
chr7 (130-307)||(5377093-5377271)
chr7 (130-204)||(25979928-25980002)
chr7 (131-204)||(3920547-3920620)
chr7 (136-252)||(33841092-33841208)
chr7 (47-124)||(36251010-36251087)
chr7 (137-252)||(8906551-8906667)
chr7 (210-305)||(37182363-37182458)
chr7 (210-309)||(39317084-39317183)
chr7 (61-197)||(4101492-4101617)
chr7 (131-264)||(7780017-7780151)
chr7 (219-264)||(23475225-23475270)
chr7 (59-116)||(31345474-31345531)
chr7 (216-264)||(19439972-19440020)
chr7 (219-307)||(24753261-24753349)
chr7 (47-123)||(43550497-43550573)
chr7 (131-198)||(22973397-22973464)
chr7 (135-273)||(38152900-38153038)
chr7 (131-295)||(16079022-16079187)
chr7 (219-264)||(23457157-23457202)
chr7 (219-304)||(23533526-23533611)
chr7 (49-117)||(3774007-3774075)
chr7 (135-199)||(45380120-45380184)
[»] scaffold0184 (1 HSPs)
scaffold0184 (131-238)||(2973-3081)
[»] chr4 (51 HSPs)
chr4 (139-252)||(31415894-31416008)
chr4 (131-238)||(14605902-14606010)
chr4 (59-304)||(12075543-12075777)
chr4 (131-304)||(6382183-6382357)
chr4 (131-308)||(11122776-11122954)
chr4 (131-304)||(19882967-19883141)
chr4 (131-304)||(47550264-47550438)
chr4 (47-124)||(36919060-36919137)
chr4 (131-306)||(11028083-11028259)
chr4 (131-305)||(26564841-26565016)
chr4 (168-305)||(7334107-7334244)
chr4 (47-124)||(7334266-7334341)
chr4 (131-304)||(5902531-5902699)
chr4 (131-204)||(29527822-29527895)
chr4 (131-200)||(30266346-30266415)
chr4 (131-200)||(30285773-30285842)
chr4 (47-124)||(42907824-42907900)
chr4 (145-265)||(17112972-17113092)
chr4 (149-247)||(43309511-43309610)
chr4 (61-305)||(4741127-4741359)
chr4 (213-304)||(25265080-25265167)
chr4 (131-204)||(10574431-10574504)
chr4 (131-204)||(31782623-31782696)
chr4 (131-199)||(21544589-21544657)
chr4 (220-304)||(42299888-42299972)
chr4 (47-122)||(21714058-21714133)
chr4 (153-263)||(30672993-30673104)
chr4 (68-123)||(36306743-36306798)
chr4 (131-198)||(45065259-45065326)
chr4 (64-122)||(24474524-24474582)
chr4 (49-123)||(25265229-25265302)
chr4 (47-85)||(39665720-39665758)
chr4 (76-122)||(43553412-43553458)
chr4 (191-263)||(39086227-39086300)
chr4 (131-196)||(47103748-47103813)
chr4 (131-307)||(7985034-7985206)
chr4 (146-198)||(15733544-15733596)
chr4 (131-266)||(25941148-25941284)
chr4 (208-304)||(36919211-36919307)
chr4 (47-129)||(30034611-30034693)
chr4 (133-245)||(10302096-10302209)
chr4 (47-124)||(21956895-21956971)
chr4 (47-124)||(25298914-25298990)
chr4 (213-254)||(43553539-43553580)
chr4 (131-163)||(568427-568459)
chr4 (131-199)||(1866566-1866634)
chr4 (131-263)||(19534465-19534592)
chr4 (126-198)||(23927659-23927731)
chr4 (47-99)||(35304623-35304674)
chr4 (47-99)||(37384210-37384262)
chr4 (61-113)||(50376443-50376495)
[»] scaffold0005 (1 HSPs)
scaffold0005 (131-238)||(211368-211476)
[»] chr2 (28 HSPs)
chr2 (134-309)||(37106700-37106876)
chr2 (131-300)||(24414046-24414216)
chr2 (131-307)||(30846951-30847128)
chr2 (131-199)||(3547171-3547239)
chr2 (131-232)||(43371558-43371660)
chr2 (134-294)||(37472679-37472840)
chr2 (131-204)||(38342530-38342603)
chr2 (213-304)||(9632474-9632565)
chr2 (131-198)||(18485653-18485720)
chr2 (131-304)||(31942095-31942270)
chr2 (180-305)||(12341654-12341780)
chr2 (47-109)||(13531881-13531943)
chr2 (134-204)||(24051635-24051705)
chr2 (131-232)||(30978932-30979032)
chr2 (131-196)||(14331532-14331597)
chr2 (131-176)||(30696929-30696974)
chr2 (47-123)||(13954677-13954753)
chr2 (47-123)||(14095884-14095960)
chr2 (47-115)||(25210309-25210377)
chr2 (213-304)||(13830823-13830914)
chr2 (131-197)||(44057887-44057954)
chr2 (47-85)||(31600887-31600925)
chr2 (253-303)||(34544233-34544283)
chr2 (61-123)||(37309812-37309874)
chr2 (219-304)||(6027811-6027896)
chr2 (219-303)||(18106029-18106114)
chr2 (135-163)||(25210386-25210414)
chr2 (47-99)||(40359276-40359328)
[»] chr3 (26 HSPs)
chr3 (131-305)||(39655182-39655357)
chr3 (131-273)||(54317148-54317291)
chr3 (131-307)||(23546855-23547026)
chr3 (131-304)||(42758378-42758552)
chr3 (131-306)||(29284340-29284516)
chr3 (130-253)||(34119659-34119783)
chr3 (213-300)||(23580914-23581001)
chr3 (131-304)||(4015954-4016128)
chr3 (135-232)||(35687473-35687571)
chr3 (130-305)||(4557214-4557390)
chr3 (131-232)||(19111738-19111840)
chr3 (213-307)||(22535748-22535842)
chr3 (208-266)||(42243469-42243527)
chr3 (219-304)||(29858485-29858570)
chr3 (213-306)||(49580151-49580244)
chr3 (131-263)||(52198159-52198292)
chr3 (131-223)||(40796129-40796221)
chr3 (59-110)||(40890290-40890340)
chr3 (213-307)||(6738312-6738406)
chr3 (210-304)||(44106704-44106797)
chr3 (133-306)||(48390725-48390899)
chr3 (131-267)||(4553194-4553331)
chr3 (219-304)||(10371183-10371268)
chr3 (188-304)||(43582638-43582755)
chr3 (213-306)||(52572696-52572789)
chr3 (150-253)||(27252588-27252691)
[»] chr6 (20 HSPs)
chr6 (131-264)||(256442-256576)
chr6 (130-263)||(9458666-9458800)
chr6 (131-304)||(27738776-27738950)
chr6 (131-263)||(18908897-18909030)
chr6 (130-304)||(28079606-28079781)
chr6 (131-295)||(5863302-5863467)
chr6 (131-204)||(29199896-29199969)
chr6 (213-305)||(30986340-30986432)
chr6 (131-262)||(32053092-32053218)
chr6 (131-264)||(32853848-32853982)
chr6 (130-306)||(20349067-20349244)
chr6 (131-305)||(27534688-27534863)
chr6 (61-116)||(34179096-34179152)
chr6 (61-124)||(13769017-13769080)
chr6 (213-304)||(31496521-31496612)
chr6 (213-304)||(31501907-31501998)
chr6 (131-244)||(12678064-12678178)
chr6 (131-263)||(13769076-13769209)
chr6 (136-304)||(32532549-32532718)
chr6 (219-307)||(12309671-12309759)
[»] scaffold0519 (1 HSPs)
scaffold0519 (208-304)||(10372-10468)
[»] scaffold0008 (2 HSPs)
scaffold0008 (131-244)||(67753-67867)
scaffold0008 (131-244)||(75596-75710)
[»] scaffold0059 (1 HSPs)
scaffold0059 (131-223)||(70099-70192)
[»] scaffold0013 (2 HSPs)
scaffold0013 (131-200)||(105484-105553)
scaffold0013 (131-232)||(128103-128205)
[»] scaffold0795 (1 HSPs)
scaffold0795 (202-307)||(300-404)
[»] scaffold0244 (1 HSPs)
scaffold0244 (135-244)||(4552-4661)
[»] scaffold0036 (1 HSPs)
scaffold0036 (131-204)||(33397-33470)
[»] scaffold0015 (1 HSPs)
scaffold0015 (131-196)||(55917-55981)


Alignment Details
Target: chr1 (Bit Score: 441; Significance: 0; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 46 - 594
Target Start/End: Complemental strand, 5293568 - 5293027
Alignment:
Q  46 ttgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggttt 145  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||    
T  5293568 ttgaaatagttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggt------tt 5293475  T
Q  146 ggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtcaaagcggagaaaaccc 245  Q
    || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  5293474 ggagtgggtacatatatccctgttatccgtcctgtaccagtattttgaaatcggagaaacccaaactcatactcaaacacagtcaaagcggagaaaaccc 5293375  T
Q  246 gttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattgttaagttgcacatcgtgaacgagattcgtaaattttc 345  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  5293374 gttaaattgggtttagttcaggcgggtatccgcatgtatgtgttttgttgtcatatctaattgttaagttgcacgtcgtgaacgagattcgtaaattttc 5293275  T
Q  346 aatcactatcattattttcgtaaattttcaattactattatcattttatctatctaannnnnnnnatcaaagctttaaatccgaacagtccgatcaaaat 445  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  5293274 aatcactatcattattttcgtaaattttcaattattattatcattttatctatctaa-tttttttatcaaagctttaaatccgaacagtccgatcaaaat 5293176  T
Q  446 cagacgatggtagatattgtaacttccctaatgccctaaagcgtgtagtcttactatagtgaattgaggttcgagaataagtcataaggcactcgcactg 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5293175 cagacgatggtagatattgtaacttccctaatgccctaaagcgtgtagtcttactatagtgaattgaggttcgagaataagtcataaggcactcgcactg 5293076  T
Q  546 acattgagagaagtggagaaaggactgagaaagtactacaccaagttgt 594  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5293075 acattgagagaagtggagaagggactgagaaagtactacaccaagttgt 5293027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 134 - 304
Target Start/End: Original strand, 5181047 - 5181218
Alignment:
Q  134 gggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaa 232  Q
    ||||||||||||||||||||| | |||||  | |||| ||||||  |||| ||||||||||||||| | ||||  | || |||||  |||| ||||||||    
T  5181047 gggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaa 5181146  T
Q  233 gcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
      || |||||||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||| ||||||||    
T  5181147 atggggaaaacccgtcaaattgaatttggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 5181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 35069973 - 35069862
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||| |||||| ||||| ||||||||| | ||||| |||||||||| ||||  |||||    
T  35069973 tttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcatacccaaatccagtc 35069874  T
Q  230 aaagcggagaaa 241  Q
    |||  |||||||    
T  35069873 aaattggagaaa 35069862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 39616332 - 39616476
Alignment:
Q  166 tgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||||| ||||||| |||| || ||||||||| || |||| |  | |||||||| ||||| |||||||| ||| |||||| ||| ||||||||||||||||    
T  39616332 tgttacccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtttggttc 39616431  T
Q  265 aggcaggtatccgc-atgtatgtgttttgttgtcatgcctaattg 308  Q
     ||| |||| ||||   ||||| ||||||||||||||||||||||    
T  39616432 gggcgggtaaccgcggggtatgagttttgttgtcatgcctaattg 39616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 44615559 - 44615427
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||| ||||||||||||||| |||||  |||||| ||||||  |||| || |||| ||||| | |||| |  |||||||||| ||||| |||||    
T  44615559 tttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtc 44615460  T
Q  230 aaagcggagaaaacccgttaaattgagtttggt 262  Q
    ||| |||  ||||||||| ||||||||||||||    
T  44615459 aaaacgggaaaaacccgtcaaattgagtttggt 44615427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 44793010 - 44793142
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||| ||||||||||||||| |||||  |||||| ||||||  |||| || |||| ||||| | |||| |  |||||||||| ||||| |||||    
T  44793010 tttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtc 44793109  T
Q  230 aaagcggagaaaacccgttaaattgagtttggt 262  Q
    ||| |||  ||||||||| ||||||||||||||    
T  44793110 aaaacgggaaaaacccgtcaaattgagtttggt 44793142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 23058471 - 23058573
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||| | |||| |||||  ||||  | ||||||||||||||| ||||| |||| ||||||||||| |||||    
T  23058471 tttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaaacccagtc 23058570  T
Q  230 aaa 232  Q
    |||    
T  23058571 aaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 29936421 - 29936601
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-------ctgaaactcatactcaaac 223  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| ||||||||| ||||| ||||       |  | |||||||| |||||    
T  29936421 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaacccatacccatactcatacccaaac 29936520  T
Q  224 acagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
      ||||||| ||| |||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||||||||||||    
T  29936521 ttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgccta 29936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 48125828 - 48125763
Alignment:
Q  59 gagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||||||||||||||||||||||| | || |||||||| |||| ||||||| |||||||||||    
T  48125828 gagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgg 48125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 307
Target Start/End: Complemental strand, 49250857 - 49250680
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| | ||||| ||| |||||  |  ||| ||||||  |||| || |||||| ||||| |||| || | || ||||| ||||| |||||    
T  49250857 tttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtc 49250758  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||| |||||||||||||| ||||||| |||||||| ||| | || || |  |||||  ||||||||||||||||||||    
T  49250757 aaaacggagaaaacccgtcaaattgaatttggttcgggcggataaccacgggtatgaattttgttgtcatgcctaatt 49250680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 10778646 - 10778526
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| ||||||| ||  |||| | | |||| ||||||  |||| || |||||||||||| | ||||| |||||||||| ||||| ||||||||||    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagc 10778547  T
Q  235 ggagaaaacccgttaaattga 255  Q
    ||| ||||||||| |||||||    
T  10778546 ggaaaaaacccgtcaaattga 10778526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 12495015 - 12495189
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| | ||||||||| |||||  | ||||  |||||  || | || |||||||||||| | ||||  |||| |||||  |||| |||||    
T  12495015 tttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtc 12495114  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||| || ||||| |||| ||||||  |||||||||||  |||| || ||||||||  |||||||||||||||||    
T  12495115 aaagtggggaaaatccgtcaaattggatttggttcaggtgggtaaccacatgtatgaattttgttgtcatgccta 12495189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 13020687 - 13020773
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||||| |||||||  |||||||||||||| | |||||||||||||| | |||||| |||||  |||  |||||||||||||||||||    
T  13020687 caaacccagtcaagacggagaaaacccgtcagattgagtttggttcggacaggtaaccgcagatataggttttgttgtcatgcctaa 13020773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 36187304 - 36187130
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    ||||||||||||||  |||||||||| |||||  | |||| ||||||  |||| || |||||| ||||| |||| |  | || ||||| ||||| |||||    
T  36187304 tttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtc 36187205  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| ||| |||||||||  |||||||||||||||| ||| |||| |  |  ||||| ||||||||| ||||||||    
T  36187204 aaaacggggaaaacccgccaaattgagtttggttcgggcgggtaacgacgggtatgggttttgttgccatgccta 36187130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 36421698 - 36421775
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| ||| ||||| |||||| ||||||||||| || ||||||||||||| |||| | ||||| |||||||||||    
T  36421698 tgaaatgatttagagttcgagtttttatttatataagagggataataaattgattttctatattcgagacgagtttgg 36421775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 306
Target Start/End: Original strand, 16408953 - 16409122
Alignment:
Q  137 tatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcg 235  Q
    |||||||| ||||| ||||| |||||  |||||| ||||||  |||| || ||||||||| || |||| |  | || ||||| ||||| |||||||| ||    
T  16408953 tatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacg 16409052  T
Q  236 gagaaaacccgttaaattgagtttggttc-aggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    | |||||||||| |||||| ||||| ||| |||  |||| |||  |||||| ||||||||||||||||||||    
T  16409053 gggaaaacccgtcaaattgggtttgattcgagg--ggtaaccgtgtgtatgggttttgttgtcatgcctaat 16409122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 278
Target Start/End: Complemental strand, 41477036 - 41476888
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg-gagaaactgaaactcatactcaaacacagtc 229  Q
    ||||||||||| || ||||||||||||||||||   ||||||||||| ||||  |||||||  |||||  | ||||  ||||||||| |||||| |||||    
T  41477036 tttgggtatggattcggggtgggtacatatatccacgttatccgtcccgtactcgtattttccaatcgaaaaaaacccaaactcatattcaaactcagtc 41476937  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgc 278  Q
    |||||||  ||||||| | ||| |  ||||||||| | | |||||||||    
T  41476936 aaagcgggaaaaacccatcaaaataggtttggttcggacgggtatccgc 41476888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 3627962 - 3627907
Alignment:
Q  249 aaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||||||||||||||| ||| |||| |||| |||||| ||||||||||||||||||    
T  3627962 aaattgagtttggttcgggcgggtaaccgcgtgtatgagttttgttgtcatgccta 3627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 13798300 - 13798379
Alignment:
Q  188 ttttgaaatcgg-agaaactgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcag 266  Q
    |||||||||||| | ||||  |||||||||| ||||| |||||| | ||| ||||||||||||||||| |||||||||||    
T  13798300 ttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggtttggttcag 13798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 34085242 - 34085357
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| |||||||||||||||| | | |||| || |||  |||  || |||||||||| ||| ||||  |||||||||  | ||| |||||||    
T  34085242 tgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaa 34085341  T
Q  232 agcggagaaaacccgt 247  Q
    ||||||||||||||||    
T  34085342 agcggagaaaacccgt 34085357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 50426650 - 50426563
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    ||||| |||||||| ||||||||||| ||||||||| |||||||||  || |||| ||||  |||||  |||||||| ||||||||||    
T  50426650 caaacccagtcaaaacggagaaaacctgttaaattgggtttggttcgagccggtaaccgcgggtatggattttgttgccatgcctaat 50426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 51421863 - 51422006
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| |||||||||||||||||   ||||| ||||||  |||| || |||||| ||| ||| ||||  | || ||||| ||||| |||||    
T  51421863 tttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtc 51421962  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggta 273  Q
    |||  || |||||||| | |||||| ||||||||| ||| ||||    
T  51421963 aaaatggggaaaacccatcaaattgggtttggttcgggcgggta 51422006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 13692645 - 13692772
Alignment:
Q  140 gggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtcaaagcggag 238  Q
    ||||||||||||||||| |||  ||||||| ||||||| |||||  | || ||||||||| | ||||| |||||||||||||||| || |  ||||||      
T  13692645 gggtttggggtgggtacctat--ctctgttttccgtcccgtacccatgttatgaaatcgggaaaaactcaaactcatactcaaacccaatttaagcgggt 13692742  T
Q  239 aaaacccgttaaattgagtttggttcaggc 268  Q
    ||||||| | ||||||| |||| |||||||    
T  13692743 aaaacccatcaaattgaatttgattcaggc 13692772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 301
Target Start/End: Complemental strand, 19572591 - 19572425
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| ||||||||||| |||||  | |||| | ||||  |||| || |||||||||| ||| ||||  | || ||||| ||||| ||||||||      
T  19572591 gtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaat 19572492  T
Q  235 ggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgc 301  Q
    || |||||||||| |||||  ||||||||| ||| |||| || || ||||| ||||||||| |||||    
T  19572491 ggggaaaacccgtcaaattaggtttggttcgggcgggtaaccacaagtatgggttttgttgccatgc 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 34673366 - 34673192
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  | |||| | |||   |||| || ||||||||| || | ||||  |||| ||||| ||||| ||||     
T  34673366 tttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccagtt 34673267  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||  || ||||| ||||||||||| ||||||||| ||| ||||  | |  ||||| ||||||||||||||||||    
T  34673266 aaaatggggaaaatccgttaaattgggtttggttcgggcgggtaatcactggtatgagttttgttgtcatgccta 34673192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 2581505 - 2581561
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttc 104  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||| |||||||| ||||    
T  2581505 tgaaatgatttagagtttgagtttctatttatataaaag-gatattaaattgattttc 2581561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 10450143 - 10450078
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaat 196  Q
    |||||||||| ||| |||||||||||||||||| |||||| ||| || ||||| ||||||| ||||    
T  10450143 tttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaat 10450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 19003741 - 19003628
Alignment:
Q  140 gggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaagcggag 238  Q
    ||||||||||||| |||||||||| | |||||||||||  |||| |||||||| |||||| | ||||   ||| ||||| |||||  ||||||| ||| |    
T  19003741 gggtttggggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcgggg 19003642  T
Q  239 aaaacccgttaaat 252  Q
    ||||||||| ||||    
T  19003641 aaaacccgtcaaat 19003628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 23719535 - 23719610
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||||| |||  |||||||||||||||||||||||||  | || |||||||| |||  ||||||||||||||||||    
T  23719535 tgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattga-tttgtacattcgggacgagtttg 23719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 29871369 - 29871237
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||| |||  |||||||||| |||||  | |||| | ||||  ||||  | ||||||||||||||||| |  |||||||||| |||||  ||||    
T  29871369 tttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtc 29871270  T
Q  230 aaagcggagaaaacccgttaaattgagtttggt 262  Q
    ||| ||  |||||||||| ||||||||||||||    
T  29871269 aaaacgaggaaaacccgtcaaattgagtttggt 29871237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 39219191 - 39219267
Alignment:
Q  48 gaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    |||||| ||| | ||||||||||||||||||||||||| | ||||||||| | |||| |||||  | ||||||||||    
T  39219191 gaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgg 39219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 33293663 - 33293600
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||||||||||| ||||||||  | || |||||||| |||| |||||||| ||||||||||    
T  33293663 gtttgagtttctattgatataaaatgggtactaaattgattttctacattcggaacgagtttgg 33293600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 8880380 - 8880457
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| |||  |||||||||||||||||||| ||||| | ||||||||| | ||| | |||| |||||| ||||||    
T  8880380 tgaaatgatttaaagtttgagtttctatttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgg 8880457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 12718856 - 12718783
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    ||||||||||||||  |||||||||||||||| || |||| |||||  ||||  ||||| ||||||||| ||||    
T  12718856 tttgggtatgggttcagggtgggtacatatatttccgttacccgtctcgtacacgtattatgaaatcggggaaa 12718783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 16237388 - 16237315
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| |||||  |||||||||||   |||| ||||||  |||| ||||||||||||||| ||||    
T  16237388 tttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaa 16237315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 47644999 - 47644966
Alignment:
Q  64 tgagtttctatttatataaaagtgataataaatt 97  Q
    |||||||||||||||||||||| |||||||||||    
T  47644999 tgagtttctatttatataaaagggataataaatt 47644966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 24236755 - 24236671
Alignment:
Q  220 aaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||| |||||||| |||  ||||||||| |||||||||||||||| ||| |||| ||    ||||| ||||||||| ||||||||    
T  24236755 aaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggtatgagttttgttgccatgccta 24236671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 25181156 - 25181212
Alignment:
Q  67 gtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||||||||||||| ||| |||| ||||||||||||  ||| | ||||||||||||    
T  25181156 gtttctatttatatagaagggatagtaaattgactttttacaattgggacgagtttg 25181212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 27777282 - 27777108
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| | ||||||||||| | |||| |||||||| |||||||||| ||| ||||| |||| ||||| ||||| |||||    
T  27777282 tttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtc 27777183  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| |||||||||||||| ||||| |||||||||| |  ||||| | ||  ||||| ||||||||||||||||||    
T  27777182 aaaacggagaaaacccgtcaaattaagtttggttcggataggtacctgcgggtatgagttttgttgtcatgccta 27777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 47 - 234
Target Start/End: Original strand, 29918538 - 29918715
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggtttg 146  Q
    ||||||| ||| | ||||||||||||||||||||||||| | ||||||||||| |||  ||||| |||||| |||||            |||||| || |    
T  29918538 tgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgt-----------gtatggtttcg 29918626  T
Q  147 gggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtcaaagc 234  Q
    |||||||||||||||||| ||||| |||| |||||| ||| |||||||||| ||| ||||| |||||||||| ||||  ||||||||||    
T  29918627 gggtgggtacatatatctttgttacccgttctgtacatgtgttttgaaatcgggaaaaactcaaactcatacccaaaaccagtcaaagc 29918715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 130 - 309
Target Start/End: Complemental strand, 43113711 - 43113531
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagt 228  Q
    ||||||||||| ||| ||||||||||| |||||  |||||| ||||||  | || || |||||||||||| | ||||  || ||||||| ||||| ||||    
T  43113711 atttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagt 43113612  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattgt 309  Q
    |||||| | ||||||||||||||||| ||||||||| ||  |||| || |  ||||| ||||| ||| |||||||| ||||    
T  43113611 caaagcagggaaaacccgttaaattgggtttggttcgggtgggtaaccacgggtatgagttttattgccatgcctatttgt 43113531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 136 - 309
Target Start/End: Original strand, 27932422 - 27932597
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| ||||||||||| |||||  | ||||  |||||  |||| || |||||||||||| |||| |  | || ||||| ||||| |||||||| |    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T
Q  235 ggagaaaacccgttaaattgagtttggttcaggcaggtatcc-gcatgtatgtgttttgttgtcatgcctaattgt 309  Q
    || |||||||||| |||||| ||||||||| ||| |||| || ||  ||||| |||||||||||||||||||||||    
T  27932522 ggggaaaacccgtcaaattgggtttggttcgggcgggtaacccgcgggtatgagttttgttgtcatgcctaattgt 27932597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 15173964 - 15173831
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||| ||||| ||| | ||||| ||||||||||||  ||| |||||| ||||| ||||||||||||| ||| ||||| |||| ||||| ||||| |||||    
T  15173964 tttgagtatgagttcgaggtggatacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtc 15173865  T
Q  230 aaagcggagaaaacccgttaaattgagtttggtt 263  Q
    ||| | |||||||||||| |||| ||| ||||||    
T  15173864 aaatcagagaaaacccgtcaaatcgaggttggtt 15173831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 11255021 - 11254925
Alignment:
Q  208 aaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||| ||||| |||||  ||||||| |||| ||||||||| ||||||  |||||||| | |||||| ||||||||||| ||||||||||||||||||    
T  11255021 aaacccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 11254925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 304
Target Start/End: Complemental strand, 40248453 - 40248281
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| ||| ||||||| |||||  | ||||||||||   |||| || |||||||||||| |||| |  | || ||||| ||||| |||||||    
T  40248453 tgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaa 40248354  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    | |||  ||||||||| |||||| |||||||||||||  ||| ||||  ||||| ||||||||||||| ||||    
T  40248353 aacgggaaaaacccgtcaaattgggtttggttcaggcgagtaaccgcgggtatgggttttgttgtcataccta 40248281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 40789593 - 40789695
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||||| |||||| |||| |||||| || | ||||  ||||||||| |||||| |||||    
T  40789593 tttgggtataggttcggggtgggtacatatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaaactcatattcaaactcagtc 40789692  T
Q  230 aaa 232  Q
    |||    
T  40789693 aaa 40789695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 300
Target Start/End: Original strand, 14687403 - 14687573
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||| |||||||||| |||||   |||||  ||||||| |||||||||||| | ||||  |||  ||||| ||||| || ||    
T  14687403 tttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaatc 14687502  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatg 300  Q
    |||| || |||||||||  |||||| ||| ||||  || ||| | ||||  ||||| ||||||||||||||    
T  14687503 aaagtggggaaaacccgccaaattgggttaggttttggtaggcacccgcgggtatgggttttgttgtcatg 14687573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 20399596 - 20399730
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||| ||||||| ||||||||||  |||||  | |||| ||||||  |||| || |||||||||||||| ||||  |||| ||||| ||||| |||||    
T  20399596 tttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtc 20399695  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||| ||| |||||| ||| |||||| |||||||||    
T  20399696 aaaacggggaaaactcgtcaaattgggtttggttc 20399730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 2075835 - 2075743
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||||| ||||| |||||||| ||||||||| |||| |||||| ||||||||||||| |||| || |   |||| ||||||||| |||||||||    
T  2075835 catacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaaccacggatatgagttttgttgccatgcctaa 2075743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 5793516 - 5793592
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||||| ||| | |||||||||||||||||||||||| ||||||| |||||| |||  |||||  |||||||||||    
T  5793516 tgaaatgatttagggtttgagtttctatttatataaaaatgataattaattgattttttacatttaggacgagtttg 5793592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 14155536 - 14155672
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtc 229  Q
    ||||||||||  |||||||||| || |||||||   |||| || || | |||| || |||||||||||| | ||||  |||||||||| ||||| |||||    
T  14155536 tttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtc 14155635  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcag 266  Q
    | | ||| |||||||||| |||||| |||||||||||    
T  14155636 ataccggggaaaacccgtcaaattgggtttggttcag 14155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 45236075 - 45236243
Alignment:
Q  137 tatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcg 235  Q
    |||||||| ||||||||||| |||||  |  ||| ||||||  |||| || |||||||||| | |||| || | || ||||||||||| |||||||| ||    
T  45236075 tatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacg 45236174  T
Q  236 gagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    | |||||||||| ||||||  ||||| |||| |||||| | ||  || || ||||||||| ||||||||    
T  45236175 gggaaaacccgtcaaattggttttggctcagacaggtaactgcgggtttgggttttgttgccatgccta 45236243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 6388581 - 6388470
Alignment:
Q  150 tgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaa-actgaaactcatactcaaacacagtcaaagcggagaaaacccgtt 248  Q
    ||||||| |||||| | |||| ||||| |||||| || |||| ||||||| ||| ||  |||| ||||| ||||| |||||||| |||||||| |||||     
T  6388581 tgggtacctatatccccgttacccgtcttgtacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaaacggagaaagcccgtc 6388482  T
Q  249 aaattgagtttg 260  Q
    ||||||||||||    
T  6388481 aaattgagtttg 6388470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 17469259 - 17469332
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||||||||||||||| |||||  | |||| ||||||  |||| || |||||||||||| ||||    
T  17469259 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaa 17469332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 30904049 - 30904134
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcat 215  Q
    |||||||||||||| |||||||||||| ||||||||  ||| |||||  ||||| || |||||||||||  |||||  ||||||||    
T  30904049 atttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgttttgaaatcgaggaaacccaaactcat 30904134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 17084107 - 17084027
Alignment:
Q  220 aaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatg 300  Q
    |||| |||||||||||| |||||||||| || |||| |||||||| ||  |||| || || ||||| ||||||||||||||    
T  17084107 aaacccagtcaaagcggggaaaacccgtcaacttgaatttggttcgggtgggtacccacaagtatgggttttgttgtcatg 17084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 309
Target Start/End: Original strand, 34777059 - 34777243
Alignment:
Q  120 tttggtatgaatttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactc 219  Q
    ||||| ||| ||||||||||||||| ||||||||||| || ||  ||||||  ||| |  |||| || |||||| ||||| ||||    ||| ||||| |    
T  34777059 tttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgg-gaaa----aacccataccc 34777153  T
Q  220 aaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattgt 309  Q
    |||| |||||||| |||  |||||||||||||||| ||||||||| | | ||||  | |  ||||| ||||||||| |||||||| ||||    
T  34777154 aaacccagtcaaaacgggaaaaacccgttaaattgggtttggttcggacgggtaatcacgggtatgagttttgttgccatgcctatttgt 34777243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 15068668 - 15068550
Alignment:
Q  134 gggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaa 232  Q
    ||||||||||| ||||||| |||||||||| | |||| | |||| ||||| ||||||||||||||| | ||||   ||| ||||| || || ||||||||    
T  15068668 gggtatgggttcggggtggatacatatatc-ccgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccagacccagtcaaa 15068570  T
Q  233 gcggagaaaacccgttaaat 252  Q
     ||| |||||||||| ||||    
T  15068569 tcggggaaaacccgtcaaat 15068550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 17108321 - 17108384
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    |||| |||||||||||||||||||  ||||||||||||| |||  ||| |||||| ||||||||    
T  17108321 gtttaagtttctatttatataaaatggataataaattgattttttacaatcgggatgagtttgg 17108384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 2183690 - 2183588
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaact-gaaactcatactcaaacacagtc 229  Q
    |||| ||||| ||| ||||||||||||||||||||  ||| |  ||  ||||| |||||||||||||||||||| |  ||||||||||  |||| |||||    
T  2183690 tttgagtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaatccaaactcatacctaaacccagtc 2183591  T
Q  230 aaa 232  Q
    |||    
T  2183590 aaa 2183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 27056634 - 27056517
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| |||||||||| ||||| | | |||| ||||||  |||||||| ||||||||| ||| ||||  |||| ||||  ||||| ||| ||||||    
T  27056634 gtatgggttcggggtgggtagatataaccccgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagc 27056535  T
Q  235 ggagaaaacccgttaaat 252  Q
    |  |||||||||| ||||    
T  27056534 gaggaaaacccgtcaaat 27056517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 36274993 - 36275042
Alignment:
Q  67 gtttctatttatataaaagtgataataaattgactttcaacattcgggac 116  Q
    ||||||||||||||||||| |||| |||||||| |||  |||||||||||    
T  36274993 gtttctatttatataaaagggatagtaaattgattttttacattcgggac 36275042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 29246034 - 29245866
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||||||||||||||| |||||   |||||| |||||  |||| || ||||||||||||||||| || | || ||||| |||||  ||||||    
T  29246034 tgggtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaa 29245935  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatg 300  Q
    | ||| |||||||||| |||||||||||||||| ||| |||| ||||  ||||| ||||||||||||||    
T  29245934 aacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccgcgggtatgggttttgttgtcatg 29245866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 304
Target Start/End: Complemental strand, 16311431 - 16311204
Alignment:
Q  67 gtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggtttggggtgggtacatatatctct 166  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||  |||||     |||      ||||||| ||||||||||| |||||| ||    
T  16311431 gtttctatttatataaaagggataataaattgattttcaacattcgagacaggtttg-----aat------atgggttcggggtgggtacctatatccct 16311343  T
Q  167 gttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttca 265  Q
    ||||||||||  ||||  || |||||||||||| | ||||| |||||||||  ||||| || |||||||||  |||| |||| |||||  ||||||||||    
T  16311342 gttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaaaccgtcaaattaggtttggttca 16311243  T
Q  266 ggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| |||| ||||   |||| |||||||||| |||||||    
T  16311242 ggcgggtacccgcggatatgagttttgttgttatgccta 16311204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 12712642 - 12712569
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  12712642 tttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaa 12712569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 12773906 - 12773833
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||| ||||||||| | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  12773906 tttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaa 12773833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 47 - 265
Target Start/End: Original strand, 29664902 - 29665107
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggtttg 146  Q
    ||||||| ||| ||||||||||||||||||| ||||||| | || |||||||| |||  |||||||||||| ||||||           ||||| ||| |    
T  29664902 tgaaatgatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgg-----------gtatgagttcg 29664990  T
Q  147 gggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtcaaagcggagaaaacccg 246  Q
      |||||||| |||||| | |||| || || |||||| || |||||||||||||| |||  |||||||||| ||||| || |||||||||| ||||||||    
T  29664991 aagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatcggag-aacccaaactcatacacaaactcaatcaaagcgga-aaaacccg 29665088  T
Q  247 ttaaattgagtttggttca 265  Q
    | ||||||| |||||||||    
T  29665089 tcaaattgaatttggttca 29665107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 28569106 - 28568984
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaact-gaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||| | |||| |||||| ||||| | ||||||||||||| |||| |  |||||||||| ||||| |||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  230 aaagcggagaaaacccgttaaat 252  Q
    ||| | | |||||||||| ||||    
T  28569006 aaatcagggaaaacccgtcaaat 28568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 2681220 - 2681353
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||| |||  ||||| |  ||| || ||| ||||||||||||||||||||| | ||||  |||||||| | ||||| |||||    
T  2681220 tttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaactcagtc 2681319  T
Q  230 aaagcggagaaaacccgttaaattgagtttggtt 263  Q
    ||| ||| |||||||||| |||||||| ||||||    
T  2681320 aaatcggggaaaacccgtcaaattgaggttggtt 2681353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 306
Target Start/End: Complemental strand, 6156003 - 6155829
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| |||||||||||||||||  ||  || | ||||| |||| || |||||||||||| |||| |  |||| ||||| ||||| |||||    
T  6156003 tttgggtatgggttcggggtgggtacatatatacct--tacctgtcctatacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtc 6155906  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    ||| || |||||||||||||||||   |||||| | ||  | || ||||| ||||| ||||||||| ||||||||||    
T  6155905 aaaacgaagaaaacccgttaaatttgatttggtacgggtggataaccgcaggtatgagttttgttgccatgcctaat 6155829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 12250974 - 12251041
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg 198  Q
    ||||||||||||||  | |||||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  12250974 tttgggtatgggttcagagtgggtacatatatctctgttacccgtccggtacccgtattttgaaatcg 12251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 12866634 - 12866471
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| | ||||||||| |||||  |||||| ||||||  ||||  | |||||||||||||| ||||| | || ||||| ||||| |||||||    
T  12866634 tgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaa 12866535  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttg 295  Q
    |  || |||||||||| ||||||  |||||||| | | |||| || |||||||| |||||||||    
T  12866534 aatggggaaaacccgtcaaattggatttggttcggacgggtaaccacatgtatgggttttgttg 12866471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 4920830 - 4921004
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||| ||| |||||  | |||| ||||||  |||| || |||||| ||||| |||| |  | || ||||  ||||| |||||    
T  4920830 tttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtc 4920929  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| |||||||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||| ||||||||    
T  4920930 aaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 4921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 23045072 - 23044974
Alignment:
Q  135 ggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaa 232  Q
    |||||||||| |||||||||||||||||||| |||| || ||| ||||| ||||||||||||||| | ||||  |||| ||||| ||||| ||||||||    
T  23045072 ggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccatacccaaactcagtcaaa 23044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 307
Target Start/End: Original strand, 4583125 - 4583300
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaa 231  Q
    ||||||||||||||||||||| || |||||  | |||| ||||||  |||| || |||||||||||| |||| |  | || ||||  ||||| || ||||    
T  4583125 tgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaa 4583224  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    | ||| |||||||||| |||||| ||||||||| ||| |||| |||    |||| ||||||||| |||||||||||    
T  4583225 aacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgtggatatgagttttgttgccatgcctaatt 4583300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 10822608 - 10822538
Alignment:
Q  134 gggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    ||||||||||| |||||||||||||||| | | |||| ||||||| |||| || |||||||||||||||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaa 10822538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 133 - 294
Target Start/End: Complemental strand, 12834657 - 12834495
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| ||||| ||||| |||||  |||||| ||||||  || |  | ||||||||| ||||||| |  | || ||||| ||||| |||||||    
T  12834657 tgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaa 12834558  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgtt 294  Q
    |  || |||||||||| |||||||||||||||| | | |||| || |||||||| ||||||||    
T  12834557 aatggggaaaacccgtcaaattgagtttggttcggacgggtaaccacatgtatgggttttgtt 12834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 305
Target Start/End: Original strand, 15890213 - 15890385
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| ||| ||||||| |||||  | |||| ||||||  |||| || ||||||||||||||||| |  | || ||||  |||||  ||||||    
T  15890213 tgggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaa 15890311  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    | |||  ||||||||| ||||||  |||||||| ||| |||| ||||  ||||| |||||||||||||||||||    
T  15890312 aacgggaaaaacccgtcaaattggatttggttcgggcgggtaaccgcgagtatgggttttgttgtcatgcctaa 15890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 18452022 - 18451967
Alignment:
Q  68 tttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    |||||||| ||||||||| ||||||||||||| |||| ||| ||||||||||||||    
T  18452022 tttctattaatataaaagggataataaattgattttctacaatcgggacgagtttg 18451967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 40517893 - 40517988
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattg 308  Q
    ||||| ||||| |||||||| |||  |||| |||| ||||||| |||||||||||| |||| || |  ||||| ||||||||| ||||||||||||    
T  40517893 catacccaaacccagtcaaaacgggaaaaatccgtcaaattgaatttggttcaggcgggtaaccacgggtatgggttttgttgccatgcctaattg 40517988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 5908773 - 5908639
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    ||||||||||||||||||||| ||||||||||  | |||| ||||||  |||| || ||| || ||||| | ||||| | || ||||| ||||| || ||    
T  5908773 tttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatc 5908674  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttc 264  Q
    |||  || |||||||||| |||||| |||||||||    
T  5908673 aaaatggggaaaacccgtcaaattgggtttggttc 5908639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 38006555 - 38006489
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaat 196  Q
    ||||||||||||||| ||||||||||| ||||| |||||||  |||||  |||| ||||||||||||    
T  38006555 atttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaat 38006489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 12457468 - 12457525
Alignment:
Q  67 gtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    |||||||||||||| |||| | ||||||||||| |||| |||||||||||| ||||||    
T  12457468 gtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgg 12457525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 16366591 - 16366528
Alignment:
Q  62 tttgagtttctatttatataaaagtga-taataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||||||| |||||||||||| || ||||||| | | |||| |||||||||||||||||||    
T  16366591 tttgagtttctttttatataaaagggagtaataaaataattttctacattcgggacgagtttgg 16366528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 17853295 - 17853204
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| ||||| || ||||| ||| |||||||||| |||||  ||||||||||||  |||| ||||  ||||| ||||||||| ||||||||    
T  17853295 catacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcaggtgggtaaccgcgggtatgcgttttgttgccatgccta 17853204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 35311900 - 35311991
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| ||||| |||||||| |||| |||| |||| |||||| ||||||||| ||| |||| ||||   |||| ||||| ||||||||||||    
T  35311900 catacccaaactcagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaaccgcggatatgagttttattgtcatgccta 35311991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 40187790 - 40187723
Alignment:
Q  71 ctatttatataaaagtgataataaattgactttcaacattcgggacgagttt-ggtatgaatttgggt 137  Q
    ||||||||||||||| | ||||||||| | |||| | ||||||||||||||| ||||||| |||||||    
T  40187790 ctatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatgagtttgggt 40187723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 6092531 - 6092445
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcat 299  Q
    ||||| ||||| || ||||| ||| |||||||||||||||||| |||||||| ||| |||| ||    ||||| |||||||||||||    
T  6092531 catacccaaacccaatcaaaacggggaaaacccgttaaattgaatttggttcgggcgggtaacctagggtatgagttttgttgtcat 6092445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 39887260 - 39887202
Alignment:
Q  46 ttgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttc 104  Q
    |||||||| ||| || || ||||||||||||||||||||| || |||||||||| ||||    
T  39887260 ttgaaatgatttagatttcgagtttctatttatataaaagagagaataaattgattttc 39887202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 131 - 292
Target Start/End: Complemental strand, 40187741 - 40187580
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||| ||||||| ||  ||| |||||||| |||| |||||  | ||| || ||||||||| || |||| |  ||||||||   ||||| |||||    
T  40187741 tttgggtatgagtttggg-tgaatacctatatctccgttacccgtctcgcacccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtc 40187643  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttg 292  Q
    ||||||  |||||||||| ||| |||||||||||| | | |||| ||||| ||||| ||||||    
T  40187642 aaagcgaggaaaacccgtcaaaatgagtttggttcggacgggtacccgcaggtatgagttttg 40187580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 17153173 - 17153242
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgga 200  Q
    |||||||||||||||||| || |||||||||||   ||||||||||| |||||  | |||| ||||||||    
T  17153173 tttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaaatcgga 17153242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 300
Target Start/End: Complemental strand, 22694986 - 22694817
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtca 230  Q
    |||||||||||||| ||||||||||| | |||  | ||||  |||||  |||| ||||||||| ||||| |||||  | || ||||| ||||| |||| |    
T  22694986 tttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgagatcggggaaacccatacccatacccaaacccagtta 22694887  T
Q  231 aagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatg 300  Q
    || |||  |||  |||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||| ||||    
T  22694886 aaacgggaaaattccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 22694817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 32575023 - 32574950
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    ||||||| |||||| ||| ||||||||||||||  ||||| || ||| ||| |||| |||||||||||| ||||    
T  32575023 tttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctgtgttttgaaatcggggaaa 32574950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 17153121 - 17153177
Alignment:
Q  68 tttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||||||| || ||| | ||||||||||| |||| |||||||||||| ||||||    
T  17153121 tttctatttatctagaaggggtaataaattgattttctacattcgggacgggtttgg 17153177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 35311831 - 35311895
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgga 200  Q
    ||||||||| || |||||||| ||||| ||||||| ||||||  |||| || |||||||||||||    
T  35311831 gtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaatcgga 35311895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 304
Target Start/End: Original strand, 37218050 - 37218188
Alignment:
Q  167 gttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttca 265  Q
    |||| |||||| |||||||| ||||||||| ||| ||| || |||||||||| ||||| |||||||| ||| |||||||| | ||||||||||||||||     
T  37218050 gttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcg 37218149  T
Q  266 ggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||  |||||||||  ||||| ||||||||||||||||||    
T  37218150 ggtgggtatccgctggtatgagttttgttgtcatgccta 37218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 306
Target Start/End: Complemental strand, 45885850 - 45885673
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagt 228  Q
    |||| |||||||||| ||||||||||| |||||   ||||| ||||||  |||| || |||||| ||||| |||| || | || ||||| ||||| ||||    
T  45885850 attttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagt 45885751  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    |||| ||||||||||||||||||||| |||||||||  || |||| || |  ||||| ||||||||| ||||||||||    
T  45885750 caaaacggagaaaacccgttaaattgggtttggttcgagcgggtaaccacgggtatgggttttgttgccatgcctaat 45885673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 27063147 - 27063249
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg-gagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||| ||| |||||| ||||||||||| | ||||||||||||||||| |||||||||||||| |  ||||| |||||||||| ||||| |||||    
T  27063147 tttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcatacccaaacccagtc 27063246  T
Q  230 aaa 232  Q
    |||    
T  27063247 aaa 27063249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 133 - 303
Target Start/End: Original strand, 10072477 - 10072648
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| ||||||||||| |||||  | |||| |||| |  |||| || |||||||||||| | ||||  | || ||||| ||||| |||||||    
T  10072477 tgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaa 10072576  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcct 303  Q
    | ||| |||||||||| |||||| ||||||||| ||| |||| ||||  ||||| ||||||||| |||||||    
T  10072577 aacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcct 10072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 305
Target Start/End: Original strand, 12980386 - 12980561
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  |  ||| ||||||  |||| || |||||||||||| |||| |  |||| ||||| ||||| |||||    
T  12980386 tttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaacccagtc 12980485  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    |||  || |||||||||||||||||||||||||||  || |||| || |  ||||| ||||||||| |||| ||||    
T  12980486 aaaatggggaaaacccgttaaattgagtttggttctagcgggtaaccacgggtatgagttttgttgccatgtctaa 12980561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 305
Target Start/End: Complemental strand, 3227025 - 3226855
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| ||||||||||| |||||  |||||| ||||||  |||| || |||||||||||| |||| |  | || ||||||||||| |||| ||| |    
T  3227025 gtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaac 3226926  T
Q  235 ggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    |  ||||| |||| |||||| ||||||||| | | |||| |||||||||||  |||||||| |||||||||    
T  3226925 gaggaaaatccgtcaaattgggtttggttcggacgggtaaccgcatgtatggattttgttgccatgcctaa 3226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 304
Target Start/End: Original strand, 30650639 - 30650814
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagt 228  Q
    ||||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| || |||||| || || | ||||| | || |||||  |||| ||||    
T  30650639 atttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagt 30650738  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||| ||| |||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||| ||||||||    
T  30650739 caaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgacatgccta 30650814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 3157092 - 3157265
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    ||||||||| |||| || |||||||| |||||| | |||||||||||  ||||  |||||||||||||| | ||||  |||| ||||| |||||  ||||    
T  3157092 tttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtc 3157191  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||||| ||||| |||  |||||  ||||||||| ||| |||| |||||||||||  ||||| || ||||||||    
T  3157192 aaagcggggaaaa-ccgacaaattaggtttggttcgggcgggtacccgcatgtatgatttttggtgccatgccta 3157265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 18683983 - 18684056
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| | ||||| |||||||||| |||||| |||||| ||||| ||||||||||||||| ||||    
T  18683983 tttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaa 18684056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 32546201 - 32546269
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg 199  Q
    |||||||||||||| |||||||||||||||||| | |||| |||| | ||||| |||||||||||||||    
T  32546201 tttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgg 32546269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 307
Target Start/End: Original strand, 5377093 - 5377271
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagt 228  Q
    ||||||||||||||| ||||||||||| |||||  |  ||| ||||||  ||||||| |||||||||||| | ||||  |||||||||||||| | || |    
T  5377093 atttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaat 5377192  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    |||| |||  |||| ||||||||||   ||||||||||  ||||| || |  |||||  |||| ||||||||| |||||    
T  5377193 caaaacgggaaaaatccgttaaattagatttggttcagataggtaaccacgggtatgaattttattgtcatgcgtaatt 5377271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 25980002 - 25979928
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    ||||||||||| ||||||||||||||||||||| || |||| |||||   ||||||| |||||||||||| ||||    
T  25980002 atttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaatcggggaaa 25979928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 3920547 - 3920620
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| ||||||||||| |||||  |||||||||||||  |||| || |||||||||||| ||||    
T  3920547 tttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaa 3920620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 33841092 - 33841208
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| |||||| ||||||||| |  ||||| ||||||  |||| || |||||||||||| | ||||| ||| |||||||||||| ||||||||||    
T  33841092 gtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattcatactcaaac-cagtcaaagc 33841190  T
Q  235 ggagaaaacccgttaaat 252  Q
    ||  ||||||||| ||||    
T  33841191 gggaaaaacccgtcaaat 33841208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 36251087 - 36251010
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||||||| |||||| ||||| |||||||||||||    ||||||||||| |||| |||||||||||| ||||||    
T  36251087 tgaaatggtttagagttttagtttttatttatataaaatatgtaataaattgattttctacattcgggacgggtttgg 36251010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 252
Target Start/End: Complemental strand, 8906667 - 8906551
Alignment:
Q  137 tatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcg 235  Q
    |||||||| |||||||||||||||| | | ||||| ||||   |||  || ||||||||||||||||| || |||| ||||| ||||  || ||||||||    
T  8906667 tatgggttcggggtgggtacatataaccccgttattcgtctcatactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcg 8906568  T
Q  236 gagaaaacccgttaaat 252  Q
    |||||||||||| ||||    
T  8906567 gagaaaacccgtcaaat 8906551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 37182363 - 37182458
Alignment:
Q  210 actcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    |||||||| ||||| |||||||| ||| |||||||||| |||||||||||| ||| ||| |||| ||||   |||| ||||||||| || ||||||    
T  37182363 actcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttgattcgggcgggtaaccgcggatatgggttttgttgccacgcctaa 37182458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 39317084 - 39317183
Alignment:
Q  210 actcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattgt 309  Q
    |||||||  ||||| |||||||| ||| |||||||||| |||||||||||||||| ||| | || ||||  |||||  |||||||| |||||||| ||||    
T  39317084 actcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcggataaccgcgagtatgaattttgttgccatgcctacttgt 39317183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 4101492 - 4101617
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggtttggggtgggtacatat 160  Q
    |||||||||| |||||| |||||| || ||||||||||| ||||||||||| ||||| |           || |||||||||||  || |||||||||||    
T  4101492 gtttgagtttttatttaaataaaattggtaataaattgattttcaacattcaggacggg-----------ttagggtatgggttcaggatgggtacatat 4101580  T
Q  161 atctctgttatccgtcctgtacctgtattttgaaatc 197  Q
    ||| |||| | || |||||||||||| ||||||||||    
T  4101581 atccctgtaacccatcctgtacctgtgttttgaaatc 4101617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 7780017 - 7780151
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    ||||||||| |||| ||||||||||| |||||  |  ||||||||||  |||| || |||||| ||||| |||| |  | || ||||| ||||| |||||    
T  7780017 tttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtc 7780116  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||| ||| ||||| |||| ||||||||||||||||    
T  7780117 aaaacggggaaaatccgtcaaattgagtttggttc 7780151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 23475270 - 23475225
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||||    
T  23475270 caaacccagtcaaagcggggaaaacccgtcaaattgagtttggttc 23475225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 31345474 - 31345531
Alignment:
Q  59 gagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggac 116  Q
    |||||||||||||||||||||||||| || || |||||||| |||  |||||||||||    
T  31345474 gagtttgagtttctatttatataaaaatggtagtaaattgattttttacattcgggac 31345531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 19440020 - 19439972
Alignment:
Q  216 actcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttc 264  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||||||    
T  19440020 actcaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttc 19439972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 24753261 - 24753349
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||||| |||||||| ||||||||| |||| ||||||| |||||||| | | |||| || |  ||||| ||||||||| |||||||||||    
T  24753261 caaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcggacgggtaaccacgggtatgggttttgttgccatgcctaatt 24753349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 43550573 - 43550497
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||||| ||| | ||||| ||||||||||||||| ||| | |||||||| ||||||| |||||| ||||| |||||    
T  43550573 tgaaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgggtttg 43550497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 22973397 - 22973464
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg 198  Q
    |||||||||||||| | |||||||||| ||||| |  ||| |||||| ||||| ||||||||||||||    
T  22973397 tttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcg 22973464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 38152900 - 38153038
Alignment:
Q  135 ggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaag 233  Q
    |||||||||| ||||||||||| |||||  | ||||||||| |  ||||  | |||||||||||| | ||||  | || ||||| ||||| ||||||||     
T  38152900 ggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaa 38152999  T
Q  234 cggagaaaacccgttaaattgagtttggttcaggcaggta 273  Q
    ||| ||||| |||| |||||||||||||||| ||| ||||    
T  38153000 cgg-gaaaatccgtcaaattgagtttggttcgggcgggta 38153038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 295
Target Start/End: Original strand, 16079022 - 16079187
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    ||||||||| ||||||||||||| || |||||  | |||| ||||||  |||| || |||||| ||||||| ||||  ||||| |||| ||||| |||||    
T  16079022 tttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccaaacttatacccaaactcagtc 16079121  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttg 295  Q
    ||| | || ||||| ||| |||||  ||||| ||| ||| |||| || |  ||||| |||||||||    
T  16079122 aaaaccgaaaaaactcgtcaaattaggtttgcttcgggcgggtaaccacgagtatgggttttgttg 16079187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 23457157 - 23457202
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||||| |||||||||||| |||||||||| |||||| |||||||||    
T  23457157 caaacccagtcaaagcggggaaaacccgtcaaattgggtttggttc 23457202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 23533611 - 23533526
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| |||||||| |||  ||||||||| |||||| ||||||||| ||  |||| ||||  |||||  |||||||||||||||||    
T  23533611 caaacccagtcaaatcgggaaaaacccgtcaaattgggtttggttcgggagggtacccgcgggtatggattttgttgtcatgccta 23533526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 3774007 - 3774075
Alignment:
Q  49 aaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacg 117  Q
    ||||| ||||| ||||| ||| ||| ||||||||||| | ||||||||||| |||| | ||||||||||    
T  3774007 aaatgattttgcgtttgggttcctaattatataaaaggggtaataaattgattttctaaattcgggacg 3774075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 45380120 - 45380184
Alignment:
Q  135 ggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg 199  Q
    |||||||||| ||||||||||| |||||  | |||| ||||||  |||| |||||||||||||||    
T  45380120 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgg 45380184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 2973 - 3081
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||| ||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||||| | ||||  |||||||||| ||||| |||||    
T  2973 tttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccagtc 3072  T
Q  230 aaagcggag 238  Q
    ||| |||||    
T  3073 aaatcggag 3081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 31416008 - 31415894
Alignment:
Q  139 tgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaact-gaaactcatactcaaacacagtcaaagcgga 237  Q
    |||||| |||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||| |  ||||| ||||  |||| |||||||| |||     
T  31416008 tgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaatcggagaaaatccaaacttatacctaaacccagtcaaatcggg 31415909  T
Q  238 gaaaacccgttaaat 252  Q
    |||||||||||||||    
T  31415908 gaaaacccgttaaat 31415894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 14606010 - 14605902
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||  ||||| ||||||||||||||||| ||||  |||| ||||| ||||| |||||    
T  14606010 tttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtc 14605911  T
Q  230 aaagcggag 238  Q
    ||| |||||    
T  14605910 aaatcggag 14605902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 12075777 - 12075543
Alignment:
Q  59 gagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggtttggggtgggtacat 158  Q
    |||||| |||||||||||||||||||  | ||||||||||| |||| |||||| |||||||||||            ||| | |||||||||||||||||    
T  12075777 gagttttagtttctatttatataaaatgggtaataaattgattttctacattccggacgagtttga-----------gtacgagtttggggtgggtacat 12075689  T
Q  159 atatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagt 257  Q
    || || || ||| | |||  ||||| || ||||||||| ||| ||| || |||||||||| ||||| |  |||||||||| ||||||||| |||||||||    
T  12075688 atctccctattacctgtcacgtacccgtgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagcgga-aaaacccgtcaaattgagt 12075590  T
Q  258 ttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||  || | |||||| || ||| |||| ||||| ||||||||||||    
T  12075589 ttgaatcggacaggtacccacatatatgggttttattgtcatgccta 12075543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 6382357 - 6382183
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| || |||||| |||||||||| |  | || ||||| ||||| |||||    
T  6382357 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccatacccatacccaaacccagtc 6382258  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||||| |||||||||| |||||| ||||| ||| ||| |||| || |  ||||| ||||| ||| ||||||||    
T  6382257 aaagcggggaaaacccgtcaaattgggtttgattcgggcgggtaaccacgggtatgggttttattgccatgccta 6382183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 308
Target Start/End: Complemental strand, 11122954 - 11122776
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||| ||||||||| ||||||||||| |||||  | |||| ||||||  |||| || ||| || |||||||||| |  | || ||||| ||||| |||||    
T  11122954 tttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccatacccatacccaaactcagtc 11122855  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattg 308  Q
    ||| |||| |||| |||| |||||||||||||||| ||| |||| || |  ||||| ||||||||| ||||||||||||    
T  11122854 aaaacggaaaaaatccgtcaaattgagtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctaattg 11122776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 19883141 - 19882967
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||| |||| |||| ||||||| ||| |||||| | |||| || ||| ||| | || |||| ||||||| |||| |  |||||||||||||||| || ||    
T  19883141 tttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactcatactcaaacccaatc 19883042  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||||||  ||||||||| |||||| ||||||||| ||| ||||| |||  ||||| ||||||||| ||||||||    
T  19883041 aaagcgggaaaaacccgtcaaattgggtttggttcgggcgggtattcgcgagtatgggttttgttgccatgccta 19882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 47550438 - 47550264
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  |||||| ||||||  |||| || |||||| ||||| |||| || | ||  |||| ||||| |||||    
T  47550438 tttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcatacctatacccaaacccagtc 47550339  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||  || ||||| |||  |||||||||||||||| ||| |||| || |||||||| ||||||||  ||||||||    
T  47550338 aaaatggggaaaatccgccaaattgagtttggttcgggcgggtaaccacatgtatgggttttgtttccatgccta 47550264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 36919060 - 36919137
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||| |||| |||| ||| ||||||||||    
T  36919060 tgaaatgatttagagtttgagtttctatttatataaaagtggtaataaactgattttctacatccggaacgagtttgg 36919137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 306
Target Start/End: Original strand, 11028083 - 11028259
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||| ||| ||||||||||| |||||  | |||| ||||||  |||| || |||||| ||||| |||| |  | || ||||| ||||  |||||    
T  11028083 tttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtc 11028182  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    ||| |||||||||||||| |||||| ||||||||| ||  |||| || | |||||| ||||||||| ||||||||||    
T  11028183 aaaacggagaaaacccgtcaaattgggtttggttcgggtgggtaaccacgtgtatgggttttgttgccatgcctaat 11028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 305
Target Start/End: Original strand, 26564841 - 26565016
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    ||||||||||| || ||||||||||| |||||  | |||| ||||||  |||| |  |||||||||||| |||| || |||||||||| ||||| |||||    
T  26564841 tttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtc 26564940  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||| || |||||| |||| ||||||  |||||||| ||  |||| || |  ||||| ||||||||| |||||||||    
T  26564941 aaaacgaagaaaatccgtcaaattggatttggttcgggtgggtaaccacgggtatgggttttgttgccatgcctaa 26565016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 305
Target Start/End: Complemental strand, 7334244 - 7334107
Alignment:
Q  168 ttatccgtcctgtacctgtattttgaaatcggagaaactgaaactc-atactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcag 266  Q
    |||||||||| ||||| || |||||||||||| |||| |  || || |||| ||||| ||||||||||||  ||||||||| |||||  |||||||||||    
T  7334244 ttatccgtcccgtacc-gtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaattaggtttggttcag 7334146  T
Q  267 gcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    || | || ||||| ||||| ||||||||| |||||||||    
T  7334145 gcggatacccgcaagtatgggttttgttgccatgcctaa 7334107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 7334341 - 7334266
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| ||| ||||||||||||||||||||| ||| |  |||||||||||| |||||||||| |||||||||||||    
T  7334341 tgaaatgatttagagtttgagtttctatttataaaaacg--ataataaattgattttcaacatttgggacgagtttgg 7334266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 5902699 - 5902531
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtca 230  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| || ||| || ||||| ||||     || ||||| ||||| ||||||    
T  5902699 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaa-----acccatacccaaacccagtca 5902605  T
Q  231 aagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    || ||| |||||||||| |||||||||||||||| ||| |||| || |  ||||  ||||||||| ||||||||    
T  5902604 aaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtataggttttgttgccatgccta 5902531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 29527822 - 29527895
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| |||||||||||||||||| | |||| |||||  ||||| ||||||||||||||| ||||    
T  29527822 tttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaa 29527895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 30266415 - 30266346
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgga 200  Q
    |||||||||||||| ||||||| |||||||||| | |||| |||||||||||| ||||| ||||||||||    
T  30266415 tttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcgga 30266346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 30285773 - 30285842
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgga 200  Q
    |||||||||||||| ||||||| |||||||||| | |||| |||||||||||| ||||| ||||||||||    
T  30285773 tttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcgga 30285842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 42907824 - 42907900
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| ||| | ||||||||||||||||||||||||| | || |||||||| |||| |||||||||||||||||||    
T  42907824 tgaaatgatttagggtttgagtttctatttatataaaagag-tagtaaattgattttctacattcgggacgagtttgg 42907900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 17113092 - 17112972
Alignment:
Q  145 tggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtcaaagcggagaaaacc 244  Q
    |||||||||| | ||||||||| ||| ||||   ||||| || ||||  ||||||||||| | |||||||| | ||||| |||||||||||||||||| |    
T  17113092 tggggtgggtgcctatatctcttttacccgtatcgtacccgtgttttagaatcggagaaaatcaaactcattcccaaactcagtcaaagcggagaaaatc 17112993  T
Q  245 cgttaaattgagtttggttca 265  Q
    ||| |||||| ||||| ||||    
T  17112992 cgtcaaattgtgtttgattca 17112972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 43309511 - 43309610
Alignment:
Q  149 gtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtcaaagcggagaaaacccgt 247  Q
    ||||| ||||||| | | |||| ||||||  |||| || |||||||||||| | ||||  |||||||||||||||| |||||||||||||||||||||||    
T  43309511 gtgggcacatataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgt 43309610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 305
Target Start/End: Complemental strand, 4741359 - 4741127
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatgaatttgggtatgggtttggggtgggtacatat 160  Q
    ||||||||||||||||||||||||  ||||||||||||| |||  |||||||| ||| ||||        ||   ||||||||| ||||||||||| |||    
T  4741359 gtttgagtttctatttatataaaatggataataaattga-tttatacattcggaacgggttt--------tt---gtatgggttcggggtgggtacttat 4741272  T
Q  161 atctctgttatccgtcctgtacctgtattttgaaatcg-gagaaactgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagttt 259  Q
    ||| |||||||||||||  ||||  | |||| |||||| |  ||||| |||||||||  ||||| |||||||| ||| ||||||  || || ||  ||||    
T  4741271 atccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaa-cggggaaaacttgtcaatttatgttt 4741173  T
Q  260 ggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||||| | | | || ||||||||||| |||||||||||||| ||||    
T  4741172 ggttcggacggatacccgcatgtatgagttttgttgtcatgtctaa 4741127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 25265167 - 25265080
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| ||||| ||||||||||||| ||||||||| ||||| ||||| ||||||||    |||||||| |||| ||||||||| ||||||||    
T  25265167 catacccaaacgcagtcaaagcggaaaaaacccgtcaaattaagtttagttcaggc----atccgcatatatgagttttgttgccatgccta 25265080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 10574504 - 10574431
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||| ||| |||| ||||||||||||| | |||| |||||| ||||||||||| ||||||||| ||||    
T  10574504 tttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaa 10574431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 31782623 - 31782696
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||| |||||||||||||||||||||| | |||| | || | ||||| ||||||||||||||| ||||    
T  31782623 tttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaa 31782696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 21544589 - 21544657
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg 199  Q
    |||||||||||||| |||||||||||||||||| |  ||| | |||| ||||| |||||||||||||||    
T  21544589 tttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgg 21544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 42299888 - 42299972
Alignment:
Q  220 aaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||| |||||||| |||| ||||||||| |||||||||||||||| |   |||| |||||| ||||  |||||||||||||||||    
T  42299888 aaactcagtcaaaccggaaaaaacccgtcaaattgagtttggttcggatgggtaaccgcatatatgaattttgttgtcatgccta 42299972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 21714133 - 21714058
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagttt 122  Q
    ||||||| ||| | ||||||||||||||||||||||||| | ||||||||| | |||| ||||| | |||||||||    
T  21714133 tgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttgagacgagttt 21714058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 30672993 - 30673104
Alignment:
Q  153 gtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaact-gaaactcatactcaaacacagtcaaagcggagaaaacccgttaaa 251  Q
    ||||||||||| |  |||||||||| ||||| ||||||| |||||||||||| |  |||||||||| ||||| || ||||| | | |||||||||| |||    
T  30672993 gtacatatatccccattatccgtcccgtacccgtattttaaaatcggagaaaatccaaactcatacccaaacccaatcaaatcagggaaaacccgtcaaa 30673092  T
Q  252 ttgagtttggtt 263  Q
    ||| | ||||||    
T  30673093 ttgtggttggtt 30673104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 36306743 - 36306798
Alignment:
Q  68 tttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    |||||||||||||||||| | ||||||||||| |||| |||||||||||| |||||    
T  36306743 tttctatttatataaaaggggtaataaattgattttctacattcgggacgggtttg 36306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 45065259 - 45065326
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg 198  Q
    |||||||||| ||| ||| |||||||||||||| ||||||  ||||| ||||| ||||||||||||||    
T  45065259 tttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcg 45065326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 24474582 - 24474524
Alignment:
Q  64 tgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagttt 122  Q
    |||||||||||||||||||||| ||||| || |||| |||  |||||||||||||||||    
T  24474582 tgagtttctatttatataaaagggataaaaatttgattttttacattcgggacgagttt 24474524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 25265302 - 25265229
Alignment:
Q  49 aaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||| ||| || |||||||||||||||||||| ||| ||||||||||||| |||| ||||||| || |||||||    
T  25265302 aaatgatttagaatttgagtttctatttatatagaag-gataataaattgattttctacattcgagatgagtttg 25265229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 39665720 - 39665758
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaag 85  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  39665720 tgaaatggttttgagtctgagtttctatttatataaaag 39665758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 43553412 - 43553458
Alignment:
Q  76 tatataaaagtgataataaattgactttcaacattcgggacgagttt 122  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||    
T  43553412 tatataaaaggggtaataaattgattttcaacattcgggacgagttt 43553458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 39086227 - 39086300
Alignment:
Q  191 tgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggtt 263  Q
    |||||||||||||| || |||||||||  ||||| || ||||| ||||||||| |||| |||||||||||||||    
T  39086227 tgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaaattgagtttggtt 39086300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 47103748 - 47103813
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaat 196  Q
    |||||||||||||| ||||||||||||||||||   |||| ||| || ||||| ||||||||||||    
T  47103748 tttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaat 47103813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 307
Target Start/End: Complemental strand, 7985206 - 7985034
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactg-aaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||| || ||||||| ||    |||||||||||  ||||  | ||||||||||||||||| |  ||||| |||| ||||| || ||    
T  7985206 tttgggtatgggttcgggatgagtacatacat----gttatccgtcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatc 7985111  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||| |   |||||||||| |||||| ||||||||||||| | || || ||  |||| ||||||||| |||||||||||    
T  7985110 aaaaccaggaaaacccgtcaaattgggtttggttcaggcggataaccaca-atatgagttttgttgacatgcctaatt 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 15733596 - 15733544
Alignment:
Q  146 ggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg 198  Q
    |||||||||||||||||||| |||| |||||  ||||| ||||||||||||||    
T  15733596 ggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcg 15733544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 25941148 - 25941284
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| ||| |  | |||| | |||| ||||| || |||||||||| ||| ||||  |||| ||| | |||||  | ||    
T  25941148 tttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaaatc 25941247  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcag 266  Q
    |||| || |||||||| ||||||||||||| ||||||    
T  25941248 aaagtggggaaaacccattaaattgagtttagttcag 25941284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 36919211 - 36919307
Alignment:
Q  208 aaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||||||||| ||||| |||| ||||||   ||||||||| |||||||||||||||| |    ||| ||||  ||||| ||||||||||||||||||    
T  36919211 aaactcatacccaaacccagttaaagcgagaaaaacccgtcaaattgagtttggttcggatgcgtacccgcgagtatgagttttgttgtcatgccta 36919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 30034611 - 30034693
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttggtatga 129  Q
    ||||||| ||| | ||||| ||||||||||||||||| | | || |||||||| ||| |||||||| ||||  ||||||||||    
T  30034611 tgaaatgatttagggtttgggtttctatttatataaatgaggtagtaaattgatttttaacattcgagacggatttggtatga 30034693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 10302096 - 10302209
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaa 231  Q
    |||||||||||| |||||||||||||||| | | |||| |||||   |||| ||| ||||||||||| | ||||  |||| ||||| ||||| || ||||    
T  10302096 tgggtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaa 10302195  T
Q  232 agcggagaaaaccc 245  Q
    | ||| ||||||||    
T  10302196 aacggggaaaaccc 10302209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 21956971 - 21956895
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| ||| | ||||| |||| |||||||||||||| | ||||||||||| |||| |||||||  ||||||||||    
T  21956971 tgaaatgatttagggtttgggtttttatttatataaaaggg-taataaattgattttctacattcgtaacgagtttgg 21956895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 25298990 - 25298914
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||| ||| ||||||||||| ||||||||| ||||| | | ||||||||| |||||||||| || ||| ||||||    
T  25298990 tgaaatgatttagagtttgagtt-ctatttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgg 25298914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 43553539 - 43553580
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattg 254  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||    
T  43553539 catacccaaactcagtcaaagcggagaaaacccgtcaaattg 43553580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 568427 - 568459
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatc 163  Q
    |||||||||||||| ||||||||||||||||||    
T  568427 tttgggtatgggttcggggtgggtacatatatc 568459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 1866634 - 1866566
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg 199  Q
    |||||||||||||| ||||||| ||||||||||    ||| |||||  ||||| |||||||||||||||    
T  1866634 tttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgg 1866566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 19534465 - 19534592
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtca 230  Q
    |||||||||| ||| | ||||||||| |||||  |||||| ||||||  ||||   ||||| ||||||||||||     |||||||| ||||| || | |    
T  19534465 tttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacccagattttaaaatcggagaaa-----actcatacccaaacccaatga 19534559  T
Q  231 aagcggagaaaacccgttaaattgagtttggtt 263  Q
    || |||||||||||||| ||||||  |||||||    
T  19534560 aaacggagaaaacccgtcaaattggatttggtt 19534592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 23927731 - 23927659
Alignment:
Q  126 atgaatttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg 198  Q
    |||| |||||||| ||||| ||||||| ||| ||||||  ||||| ||||| ||||| ||| |||||||||||    
T  23927731 atgagtttgggtaggggttcggggtggatacctatatccatgttaaccgtcttgtacttgtgttttgaaatcg 23927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 35304674 - 35304623
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattga 99  Q
    ||||||| ||| |||||||||||||| |||||||||||| | |||||||||||    
T  35304674 tgaaatgatttagagtttgagtttctttttatataaaag-ggtaataaattga 35304623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 37384210 - 37384262
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattga 99  Q
    ||||||| ||| | ||||||  ||||||||||||||||| |||||||||||||    
T  37384210 tgaaatgatttagggtttgaacttctatttatataaaagggataataaattga 37384262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 50376495 - 50376443
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgg 113  Q
    |||| |||||||||||||||||||  || |||||||||| |||| ||||||||    
T  50376495 gttttagtttctatttatataaaatggaaaataaattgattttctacattcgg 50376443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 211368 - 211476
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||  ||||| ||||||||||||||||| ||||  |||| ||||| ||||| |||||    
T  211368 tttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtc 211467  T
Q  230 aaagcggag 238  Q
    ||| |||||    
T  211468 aaatcggag 211476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 4e-21; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 134 - 309
Target Start/End: Original strand, 37106700 - 37106876
Alignment:
Q  134 gggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaa 232  Q
    ||||||||||| || |||||||| |||||  | |||| ||||||  |||| || |||||||||||| |||| |  | || ||||| ||||| ||||||||    
T  37106700 gggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaa 37106799  T
Q  233 gcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaattgt 309  Q
     ||| |||||||||| |||||| ||||||||| ||| |||| ||||  ||||| |||||||||||||||||| ||||    
T  37106800 acggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgtcatgcctacttgt 37106876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 131 - 300
Target Start/End: Complemental strand, 24414216 - 24414046
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  |||||| ||||||  |||| || |||||| ||||| | |||| || || ||||| ||||| || ||    
T  24414216 tttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaacccaatc 24414117  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatg 300  Q
    ||| ||| |||||||||| |||||| ||||||||| ||| |||| || || ||||| ||||||||| ||||    
T  24414116 aaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacaggtatgggttttgttgccatg 24414046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 307
Target Start/End: Original strand, 30846951 - 30847128
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| || ||| || ||||| |||| |  | || ||||| ||||| |||||    
T  30846951 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtc 30847050  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||| ||| |||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||| |||||||||||    
T  30847051 aaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaatt 30847128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 3547171 - 3547239
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg 199  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  3547171 tttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcgg 3547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 43371558 - 43371660
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||| |||||||||||||||||||||| | |||| |||||| ||||| ||||||| ||||||| | ||||| ||||  |||| ||||| |||||    
T  43371558 tttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaatacccaaactcagtc 43371657  T
Q  230 aaa 232  Q
    |||    
T  43371658 aaa 43371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 134 - 294
Target Start/End: Complemental strand, 37472840 - 37472679
Alignment:
Q  134 gggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaa-actcatactcaaacacagtcaaa 232  Q
    ||||||||||| |  |||||||| || ||  | |||| ||||||  |||| || |||||||||||| |||| |  | |||||||| ||||| ||||||||    
T  37472840 gggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaa 37472741  T
Q  233 gcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgtt 294  Q
     ||| |||||||||| |||||||||||||||| ||| |||| | ||  ||||| ||||||||    
T  37472740 acggggaaaacccgtcaaattgagtttggttcgggcgggtaactgcgggtatgggttttgtt 37472679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 38342603 - 38342530
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| |||||||||||||||||| | |||| |||||| ||| | ||||||| ||||||| ||||    
T  38342603 tttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaa 38342530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 9632474 - 9632565
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||||||||| || ||||| |||  ||||||||| |||||||||||||||| ||| |||| || |  ||||| ||||||||| ||||||||    
T  9632474 catactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 9632565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 18485653 - 18485720
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcg 198  Q
    ||||||||||||||  ||||||||||||||||| | |||| |||| ||||||| ||||||| ||||||    
T  18485653 tttgggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaatcg 18485720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 31942270 - 31942095
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtatttt-gaaatcggaga-aactgaaactcatactcaaacacagt 228  Q
    ||||| |||||||||||||||||||| |||||  |||||| |||||   |||| || |||| |||||||  || |||  |||| ||||  ||||| ||||    
T  31942270 tttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaatcgaggataacccaaacccatatccaaacccagt 31942171  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||||||  ||||||| | |||||||||||||||  ||| |||| || |  ||||| ||||||||||||| ||||    
T  31942170 caaagcgggaaaaacccatcaaattgagtttggtttgggcgggtaaccacgggtatgggttttgttgtcataccta 31942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 12341654 - 12341780
Alignment:
Q  180 tacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgc 278  Q
    ||||||| |||||||||||| | ||||  | || ||||| ||||| |||||||| ||| |||||||||| |||||| ||||||||| | | | || ||||    
T  12341654 tacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggataaccgc 12341753  T
Q  279 atgtatgtgttttgttgtcatgcctaa 305  Q
      ||||| ||||||||| |||||||||    
T  12341754 gggtatgagttttgttgccatgcctaa 12341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 13531881 - 13531943
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacat 109  Q
    ||||||| ||| | ||||||||||||||||||||||||  ||||||||||||| |||| ||||    
T  13531881 tgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacat 13531943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 24051705 - 24051635
Alignment:
Q  134 gggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    ||||||||||| ||||| |||||||||||| |||||| ||||||  |||  ||||||| ||||||||||||    
T  24051705 gggtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaa 24051635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 30978932 - 30979032
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||| ||||||||||   ||||||| ||| ||||| ||||||||||||| ||| ||||  ||||||||| |||||| |||||    
T  30978932 tttgggtatgggttcggggtggatacatatatcctcgttatcc-tcc-gtacccgtattttgaaatcgggaaaaacccaaactcatattcaaacccagtc 30979029  T
Q  230 aaa 232  Q
    |||    
T  30979030 aaa 30979032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14331532 - 14331597
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaat 196  Q
    |||||||||||||| || ||||||||||||||| | |||| ||||||  |||||||||||| ||||    
T  14331532 tttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaat 14331597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 30696929 - 30696974
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtc 176  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||||    
T  30696929 tttgggtatgagttcggggtgggtacatatatctctgttacccgtc 30696974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 13954677 - 13954753
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||||| ||| | ||| ||||||||||||||||||||||| |||||| |||| |||| || |||| |||| |||||    
T  13954677 tgaaatgatttagggttcgagtttctatttatataaaagtggtaataagttgattttctacgttcgagacgggtttg 13954753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 14095884 - 14095960
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    ||||||| ||| | ||| ||||||||||||||||||||||| |||||| |||| |||| || |||| |||| |||||    
T  14095884 tgaaatgatttagggttcgagtttctatttatataaaagtggtaataagttgattttctacgttcgagacgggtttg 14095960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 25210309 - 25210377
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcggga 115  Q
    ||||||| ||| | ||||||||||||||||||||||||  | ||| ||||||| |||| ||||||||||    
T  25210309 tgaaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcggga 25210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 13830823 - 13830914
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| ||||| ||||||||  || |||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||||||| ||||    
T  13830823 catacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcataccta 13830914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 44057887 - 44057954
Alignment:
Q  131 tttgggtatgggtttgggg-tgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc 197  Q
    |||||||||||||| |||| |||||||||||||| |  ||| |||||| ||||| |||||||||||||    
T  44057887 tttgggtatgggttcgggggtgggtacatatatccccattacccgtcccgtaccggtattttgaaatc 44057954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 31600925 - 31600887
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaag 85  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  31600925 tgaaatgatttagagtttgagtttctatttatataaaag 31600887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 34544283 - 34544233
Alignment:
Q  253 tgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcct 303  Q
    |||||||||||| |||||||| ||||  ||||| |||||||||||||||||    
T  34544283 tgagtttggttctggcaggtacccgctggtatgagttttgttgtcatgcct 34544233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 37309874 - 37309812
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttg 123  Q
    |||||| ||||||||||| |||||| ||| ||||||||| |||| || ||||||||| |||||    
T  37309874 gtttgaatttctatttatgtaaaagggatgataaattgattttctaccttcgggacgggtttg 37309812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 6027896 - 6027811
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| || ||||| ||| |||||||||| |||||| ||||||||| ||| | || || |  ||||| ||||||||||||||||||    
T  6027896 caaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatgccta 6027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 18106114 - 18106029
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaa-ttgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcct 303  Q
    ||||| |||||||| ||| ||||| |||| ||| ||||||||| ||| ||| |||| || ||| |||| |||||||||||||||||    
T  18106114 caaacccagtcaaaacggggaaaatccgtcaaaattgagtttgattcgggcgggtaaccacatatatgagttttgttgtcatgcct 18106029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 25210386 - 25210414
Alignment:
Q  135 ggtatgggtttggggtgggtacatatatc 163  Q
    |||||||||||||||||||||||||||||    
T  25210386 ggtatgggtttggggtgggtacatatatc 25210414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 40359276 - 40359328
Alignment:
Q  47 tgaaatggttttgagtttgagtttctatttatataaaagtgataataaattga 99  Q
    ||||||| ||| || ||||||||||||||||||||||||   |||||||||||    
T  40359276 tgaaatgatttagactttgagtttctatttatataaaagatgtaataaattga 40359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 305
Target Start/End: Complemental strand, 39655357 - 39655182
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||||||||||||||| |||||  |||||| ||||||  |||| || |||||| ||||| | ||||  | || ||||| ||||| || ||    
T  39655357 tttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatc 39655258  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||| ||| |||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||| |||||||||    
T  39655257 aaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaa 39655182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 54317148 - 54317291
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||| ||||||| ||||||||||| |||||  | |||| ||||||| ||| ||| |||||||||||| |||| || |||| ||||||||||| |||||    
T  54317148 tttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaacccagtc 54317247  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggta 273  Q
    ||| ||| |||||||||| ||||||  |||||||| ||| ||||    
T  54317248 aaaacggggaaaacccgtcaaattggatttggttcgggcgggta 54317291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 307
Target Start/End: Complemental strand, 23547026 - 23546855
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtca 230  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| || ||| || ||||| ||||     || ||||| ||||| ||||||    
T  23547026 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaa-----acccatacccaaacccagtca 23546932  T
Q  231 aagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    || ||| ||||||||||||||||| |||||||||| || |||| || |  ||||| ||||||||| |||||||||||    
T  23546931 aaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccatgcctaatt 23546855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 42758378 - 42758552
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||  ||| |||||  |||||| ||||||  ||||||| |||||||||| || |||||  |||||||||| ||||| ||||     
T  42758378 tttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagtt 42758477  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| ||| ||||| |||| |||||| |||||| || ||| |||| || |  ||||| ||||||||| ||||||||    
T  42758478 aaaacggggaaaatccgtcaaattgggtttggatcgggcgggtaaccacgggtatgggttttgttgccatgccta 42758552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 306
Target Start/End: Original strand, 29284340 - 29284516
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||| ||||||| |||||  | |||| ||||||  |||| || ||| || ||||| | ||||  | || ||||| ||||| |||||    
T  29284340 tttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtc 29284439  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    ||| |||||||||||||| |||||| ||||||||| ||| |||| || |  ||||| ||||||||| ||||||||||    
T  29284440 aaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctaat 29284516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 34119659 - 34119783
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagt 228  Q
    ||||||||||||||| ||||||||||| |||||  ||||||||||||   |||| || |||| ||||| ||| ||||| |||||||||| ||||| || |    
T  34119659 atttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaat 34119758  T
Q  229 caaagcggagaaaacccgttaaatt 253  Q
    ||||  || |||||||||| |||||    
T  34119759 caaaatggggaaaacccgtcaaatt 34119783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 23580914 - 23581001
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatg 300  Q
    ||||| ||||| |||||||| |||  ||||||||| ||||||| |||  ||| |||||||| ||||| ||||||||||||||||||||    
T  23580914 catacccaaacccagtcaaaacgggaaaaacccgtcaaattgaatttaattcgggcaggtaaccgcaggtatgtgttttgttgtcatg 23581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 4016128 - 4015954
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| || |||||||| |||||  | |||||||||||  ||||  | |||||||||||| | ||||  |||| ||||| |||||  ||||    
T  4016128 tttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtc 4016029  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| |||  ||||||||| ||||||||||| |||| ||  |||| || |  ||||| ||||||||| ||||||||    
T  4016028 aaaacgggaaaaacccgtcaaattgagtttcgttcgggtgggtaaccacgggtatgggttttgttgccatgccta 4015954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 35687571 - 35687473
Alignment:
Q  135 ggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaa 232  Q
    ||||||| |||||| | |||||||||||| | |||| |||||  ||||| ||||| ||||||||| | ||||| |||||||||||||||| ||||||||    
T  35687571 ggtatggatttgggataggtacatatatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactcatactcaaacccagtcaaa 35687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 305
Target Start/End: Complemental strand, 4557390 - 4557214
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatat-ctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacag 227  Q
    ||||||||||||||| ||||||||||| ||||| ||| |||| ||||||  ||||  | |||||||| ||| |||| |  |||| ||||| ||||| |||    
T  4557390 atttgggtatgggttcggggtgggtacctatatactc-gttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccag 4557292  T
Q  228 tcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||||| |||  ||||||||| |||||| |||| |||| ||  |||| || |  ||||| |||||||||||||||||||    
T  4557291 tcaaaacgggaaaaacccgtcaaattgggttttgttcgggtgggtaaccacgggtatgagttttgttgtcatgcctaa 4557214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 19111738 - 19111840
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||| |||||||| |||||||||| |||||  | ||||||| ||| ||||| || |||||||||| ||| ||||| |||||||||| ||||| || ||    
T  19111738 tttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatc 19111837  T
Q  230 aaa 232  Q
    |||    
T  19111838 aaa 19111840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 22535842 - 22535748
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||||| ||||| |||||||| ||| |||||||| | |||||||||||||||| ||| | || ||||  ||||| ||||||||| ||||| |||||    
T  22535842 catacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggcggataaccgcgggtatgggttttgttgccatgcataatt 22535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 42243469 - 42243527
Alignment:
Q  208 aaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcag 266  Q
    |||||||||| ||||| |||||||| ||| |||||||||| |||||| |||||||||||    
T  42243469 aaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggtttggttcag 42243527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 29858570 - 29858485
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| |||||||| ||| ||||| ||||||||||| ||||||||| ||| |||| || |  ||||| ||||||||| ||||||||    
T  29858570 caaacccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 29858485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 49580151 - 49580244
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||  |||||||| ||| | || || |  ||||| ||||||||||||||||||||    
T  49580151 catacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatgggttttgttgtcatgcctaat 49580244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 52198159 - 52198292
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  ||||||| |||||| ||| ||| ||||  | || ||||| ||||| |||||    
T  52198159 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaacccagtc 52198258  T
Q  230 aaagcggagaaaacccgttaaattgagtttggtt 263  Q
    ||| | || ||||||||| |||||  ||||||||    
T  52198259 aaaacagaaaaaacccgtcaaattaggtttggtt 52198292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 40796221 - 40796129
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaac 223  Q
    ||||||||||  |||||||||||||||| ||||    ||| |||||| ||||| |||||||||||||||| ||||  |||| |||| ||||||    
T  40796221 tttgggtatgactttggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcggaaaaacctaaacacatattcaaac 40796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 40890290 - 40890340
Alignment:
Q  59 gagtttgagtttctatttatataaaagtgataataaattgactttcaacatt 110  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||| |||||    
T  40890290 gagtttgagtttctatttatatagaag-gataataaattgattttctacatt 40890340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 6738406 - 6738312
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||||| ||||| |||||||| |||  |||||| || |||||| ||||||||| ||| |||| ||||  ||||| ||||| ||| |||||||||||    
T  6738406 catacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttattgccatgcctaatt 6738312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 44106797 - 44106704
Alignment:
Q  210 actcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||||||| ||||| |||||||| ||| ||||||| || ||||||||||| |||| ||| ||||  | |  ||||||||||||||| ||||||||    
T  44106797 actcatacccaaacccagtcaaaacggggaaaacc-gtcaaattgagttttgttcgggcgggtaatcacgggtatgtgttttgttgccatgccta 44106704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 306
Target Start/End: Complemental strand, 48390899 - 48390725
Alignment:
Q  133 tgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaa 231  Q
    ||||||||||||  || ||||||| |||||  | |||| ||||||  |||| || |||||||||||| | ||||  | || ||||| ||||| |||||||    
T  48390899 tgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaa 48390800  T
Q  232 agcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    | ||| ||||| |||| ||||||  ||||||||   | |||| ||||  ||||| ||||||||| ||||||||||    
T  48390799 aacggggaaaatccgtcaaattggatttggttcgaacgggtaaccgcgggtatgggttttgttgccatgcctaat 48390725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 4553194 - 4553331
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtc 229  Q
    |||| ||||||||| |||||| |||  |||||| || ||| |||| | | |||  | |||||||||||| | ||||| |||| |||||  || | |||||    
T  4553194 tttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaatcgggaaaaactcaaacgcatacctaagcccagtc 4553293  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcagg 267  Q
    |||||||||||||||| | || || |||||||||||||    
T  4553294 aaagcggagaaaacccataaatttcagtttggttcagg 4553331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 10371268 - 10371183
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| |||||||| ||| |||||||||| |||||| |||||||||  || |||| || |  || || ||||||||||||||||||    
T  10371268 caaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtctgggttttgttgtcatgccta 10371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 304
Target Start/End: Original strand, 43582638 - 43582755
Alignment:
Q  188 ttttgaaatcggagaaa-ctgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgt 286  Q
    |||||||||||| |||| || | || ||||||||||| |||| ||| |||||||||||| | ||||||  |||||||| ||| |||| ||||   ||||     
T  43582638 ttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaacccatcaaattggatttggttcgggcgggtaaccgcggatatgg 43582737  T
Q  287 gttttgttgtcatgccta 304  Q
    |||||||||  |||||||    
T  43582738 gttttgttgcaatgccta 43582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 52572696 - 52572789
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
    ||||| ||||| ||||||||  || ||||||| || |||||||||||||||| ||| | || || |  ||||| ||||||||| ||||||||||    
T  52572696 catacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgggcggataaccacgggtatgggttttgttgccatgcctaat 52572789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 27252588 - 27252691
Alignment:
Q  150 tgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaagcggagaaaacccgtt 248  Q
    ||||||| |||||| ||||||||||||| |||||  |  |||||||| |||| ||||| |||||||||| ||||| || ||||| | || |||||||||     
T  27252588 tgggtacctatatcactgttatccgtcccgtacccat-gtttgaaattggagaaaactcaaactcatacccaaacccaatcaaatccgataaaacccgtc 27252686  T
Q  249 aaatt 253  Q
    |||||    
T  27252687 aaatt 27252691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 256576 - 256442
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||||||||||||||| |||||  |  ||| |||||  |||||  | |||||||||||| |||| || |||||||||| ||||||||  |    
T  256576 tttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatacccaaacacaacc 256477  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||||||| ||||| || ||||||||||||||||||    
T  256476 aaagcggggaaaatccattaaattgagtttggttc 256442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 130 - 263
Target Start/End: Original strand, 9458666 - 9458800
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagt 228  Q
    ||||||||||| ||| | |||||||||||||||| | |||||| |||| ||||| |||||||||||| || |||| || |||||||||| ||||| ||||    
T  9458666 atttgggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcatacccaaacccagt 9458765  T
Q  229 caaagcggagaaaacccgttaaattgagtttggtt 263  Q
    |||| ||| ||||| |||| |||| ||| ||||||    
T  9458766 caaatcggggaaaatccgtcaaatcgaggttggtt 9458800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 27738776 - 27738950
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||  |||| || |||||||||||| | ||||  | || |||||  |||| |||||    
T  27738776 tttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacctaaacccagtc 27738875  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| |||  ||||||| | ||||||| |||||||| |||||||| ||||  ||||| | ||||||| ||| ||||    
T  27738876 aaaacgggaaaaacccatcaaattgaatttggttcgggcaggtaaccgcgagtatggggtttgttgacatcccta 27738950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 18908897 - 18909030
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||| ||||||||||||||||||||||  ||||| ||||||  || | ||||||||||||||| | ||||  |||||||||||||||| |||||    
T  18908897 tttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactcatactcaaactcagtc 18908996  T
Q  230 aaagcggagaaaacccgttaaattgagtttggtt 263  Q
    | | |||  |||| |||| |||| ||| ||||||    
T  18908997 acatcgggaaaaatccgtcaaatcgaggttggtt 18909030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 28079781 - 28079606
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagt 228  Q
    ||||||||||||||| ||||||||||| |||||| | |||| |||||| |||||  | |||||||||||| | ||||  |||| ||||| ||||| |||     
T  28079781 atttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagc 28079682  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||||||  || |||||| ||| || |||||||   ||  |||| ||||  ||||| ||||||||||||||||||    
T  28079681 caaagcgggaaatacccgtcaaaatgggtttggtatgggtgggtacccgcgggtatgggttttgttgtcatgccta 28079606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 295
Target Start/End: Complemental strand, 5863467 - 5863302
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| | ||||||||  |||||  | |||| ||||||  |||| || |||||||||||| | ||||  | || ||||| ||||| |||||    
T  5863467 tttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtc 5863368  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttg 295  Q
    ||| ||| |||||||||| |||||| ||||||||| |||||||| || |  ||||| |||||||||    
T  5863367 aaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttg 5863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 29199969 - 29199896
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| ||||| | |||||||||| |||||| |||||| ||||| ||||||||||||||| ||||    
T  29199969 tttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaa 29199896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 30986340 - 30986432
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||||||||||| ||| |||| || |  ||||| ||||||||| |||||||||    
T  30986340 catacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaa 30986432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 32053092 - 32053218
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtca 230  Q
    ||||||||||||||||||||||||||||||||  | |||| ||||||  || |  | |||||||||||| ||     |||| ||||| ||||| ||||||    
T  32053092 tttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcgggga-----aaacccatacccaaacccagtca 32053186  T
Q  231 aagcggagaaaacccgttaaattgagtttggt 262  Q
    || ||| |||||||||| |||||| |||||||    
T  32053187 aaacggggaaaacccgtcaaattgggtttggt 32053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 32853848 - 32853982
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| ||||||||||| |||||  | |||| ||||||  |||| || |||||| ||||| |||| |  | || ||||  ||||| |||||    
T  32853848 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtc 32853947  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttc 264  Q
    ||| |||||||||||||| |||||| |||||||||    
T  32853948 aaaacggagaaaacccgtcaaattgggtttggttc 32853982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 306
Target Start/End: Original strand, 20349067 - 20349244
Alignment:
Q  130 atttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactg-aaactcatactcaaacacagt 228  Q
    ||||||||||| ||| ||||||||||| |||||| | ||||  |||||  |||| || |||||||||||| |||| |  ||||||||||  |||| || |    
T  20349067 atttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaatccaaactcataccaaaactcaat 20349166  T
Q  229 caaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaat 306  Q
     |||||||| ||     || |||||| ||||||||| |||||||| || || ||||| ||||| ||||||||||||||    
T  20349167 aaaagcggaaaattatagtcaaattgggtttggttcgggcaggtagccacaggtatgagttttattgtcatgcctaat 20349244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 305
Target Start/End: Original strand, 27534688 - 27534863
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    ||||||||||| || ||||||||||| |||||  | |||| ||||||  |||| || ||| || ||||| |||| || | || ||||| ||||| || ||    
T  27534688 tttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatc 27534787  T
Q  230 aaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaa 305  Q
    ||| ||| |||||||||| |||||||||||||||| | | | || || |  ||||| ||||||||| |||||||||    
T  27534788 aaaacggggaaaacccgtcaaattgagtttggttcggacggttaaccacgggtatgggttttgttgccatgcctaa 27534863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 34179152 - 34179096
Alignment:
Q  61 gtttgagtttctatttatat-aaaagtgataataaattgactttcaacattcgggac 116  Q
    |||||||||||||||||||| ||||| | ||||||||||| ||||||||||| ||||    
T  34179152 gtttgagtttctatttatataaaaagaggtaataaattgattttcaacattcaggac 34179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 13769017 - 13769080
Alignment:
Q  61 gtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 124  Q
    ||||||||||| |||||||||||||   ||||||||||| |||| |||||| ||||| ||||||    
T  13769017 gtttgagtttcaatttatataaaaggagtaataaattgattttctacattcaggacgggtttgg 13769080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 31496521 - 31496612
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||||||||||  | | |||| || |  ||||| ||||||||| ||||||||    
T  31496521 catacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgttgccatgccta 31496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 31501907 - 31501998
Alignment:
Q  213 catactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||||||||||  | | |||| || |  ||||| ||||||||| ||||||||    
T  31501907 catacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgttgccatgccta 31501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 131 - 244
Target Start/End: Complemental strand, 12678178 - 12678064
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtc 229  Q
    ||||||||||||||  |||||||||| |||||  |  ||| ||||||  ||||||| | |||||||||| | ||||  |||||||||| ||||| |||||    
T  12678178 tttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaacccagtc 12678079  T
Q  230 aaagcggagaaaacc 244  Q
    ||| ||| |||||||    
T  12678078 aaaacggcgaaaacc 12678064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 13769076 - 13769209
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa-ctgaaactcatactcaaacacagtc 229  Q
    ||||| ||||||||  |||||||||| ||||| || |||| ||||||  ||||  | ||||||| |||| |||| | ||||| |||||  |||| |||||    
T  13769076 tttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtc 13769175  T
Q  230 aaagcggagaaaacccgttaaattgagtttggtt 263  Q
    ||||||   ||||||||| |||||| ||||||||    
T  13769176 aaagcgagtaaaacccgtgaaattgggtttggtt 13769209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 304
Target Start/End: Original strand, 32532549 - 32532718
Alignment:
Q  136 gtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggag-aaactgaaactcatactcaaacacagtcaaagc 234  Q
    ||||||||| ||||||||||| |||||  |  ||| ||||||  |||| || |||||||||||| | ||||  | |||||||||||||| || | ||| |    
T  32532549 gtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaac 32532648  T
Q  235 ggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    ||| ||||||||| ||||||  |||| ||  ||| | || |||||  ||||  |||||||||||||||||    
T  32532649 ggaaaaaacccgtcaaattggatttgatttgggcggataaccgcagatatggattttgttgtcatgccta 32532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 12309671 - 12309759
Alignment:
Q  219 caaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgcctaatt 307  Q
    ||||| ||||||||  || |||||| ||| |||||| || |||||| ||| |||| ||||  ||||| | |||||||||||||||||||    
T  12309671 caaacccagtcaaaatggggaaaactcgtcaaattgggtctggttcgggcgggtaaccgcgggtatggggtttgttgtcatgcctaatt 12309759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 10372 - 10468
Alignment:
Q  208 aaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgccta 304  Q
    |||| ||||| |||||  ||||||| |||| ||||||||| ||||||  |||||||| | |||||| ||||||||||| ||||||||||||||||||    
T  10372 aaacccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 10468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 67753 - 67867
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaact-gaaactcatactcaaacacagtc 229  Q
    ||||||||| || | |||||||||||||||||| | ||||||||||| ||| | ||||||| ||||||| |||| |  |||| ||||||||||| |||||    
T  67753 tttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtc 67852  T
Q  230 aaagcggagaaaacc 244  Q
    ||| ||| |||||||    
T  67853 aaatcggggaaaacc 67867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 75596 - 75710
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaact-gaaactcatactcaaacacagtc 229  Q
    ||||||||| || | |||||||||||||||||| | ||||||||||| ||| | ||||||| ||||||| |||| |  |||| ||||||||||| |||||    
T  75596 tttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtc 75695  T
Q  230 aaagcggagaaaacc 244  Q
    ||| ||| |||||||    
T  75696 aaatcggggaaaacc 75710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 70099 - 70192
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatc-ggagaaactgaaactcatactcaaac 223  Q
    |||||||||||||||||||||||||||||||||   |||| |||||| ||||| ||||| ||||||| ||| |||   ||||||||||||||||    
T  70099 tttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatcaggaaaaatccaaactcatactcaaac 70192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 105553 - 105484
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgga 200  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||| ||||| |||||  |||||||||    
T  105553 tttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgtattaagaaatcgga 105484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 128205 - 128103
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcgg-agaaactgaaactcatactcaaacacagtc 229  Q
    |||||||||||||| |||||||||||||||||| |  ||| |||||| ||||| ||||| |||||| || | ||||  |||||||||||||||| || ||    
T  128205 tttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcatactcaaacccaatc 128106  T
Q  230 aaa 232  Q
    |||    
T  128105 aaa 128103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 307
Target Start/End: Original strand, 300 - 404
Alignment:
Q  202 aaactgaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgagtttggttcaggcaggtatccgcatgtatgtgttttgttgtcatgc 301  Q
    ||||||| || ||||| ||||| |||||||| ||||||||||||| | ||||||||||||||| ||| ||||  | |   |||| |||||||||||||||    
T  300 aaactgatacccatacccaaactcagtcaaaacggagaaaacccg-tcaattgagtttggttctggcgggtaatcacggatatgggttttgttgtcatgc 398  T
Q  302 ctaatt 307  Q
    ||||||    
T  399 ctaatt 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 4661 - 4552
Alignment:
Q  135 ggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaactgaaactcatactcaaacacagtcaaagc 234  Q
    |||||||||| | ||||||||  |||||| |||||| | ||||  |||| |||||||||||| || ||||   |||||||||||||||| |||| ||| |    
T  4661 ggtatgggttcgtggtgggtagctatatccctgttacctgtcccatacccgtattttgaaattggggaaaaccaaactcatactcaaactcagttaaaac 4562  T
Q  235 ggagaaaacc 244  Q
    ||| ||||||    
T  4561 ggataaaacc 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 33397 - 33470
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaatcggagaaa 204  Q
    |||||||||||||| |||||||||||||||||  | |||| ||||||  |||| || |||||||||||| ||||    
T  33397 tttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaa 33470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 55981 - 55917
Alignment:
Q  131 tttgggtatgggtttggggtgggtacatatatctctgttatccgtcctgtacctgtattttgaaat 196  Q
    ||||||||||| || |||||||||||||||||| |||||| || |||||||||  |||||||||||    
T  55981 tttgggtatggattcggggtgggtacatatatccctgtta-ccctcctgtacccatattttgaaat 55917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University