View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13513_high_8 (Length: 240)
Name: NF13513_high_8
Description: NF13513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13513_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8345792 - 8345569
Alignment:
| Q |
1 |
aatcactctccgacgagtgttccgtcaccggcgccgccttctgctgaaactaacaaccctaatttcattcgaaaaaaccttccttcaccgtgggctcaag |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
8345792 |
aatcactctccgacgagtgttccgtcaccggcgccgccttctgctgaaactaacaaccctaatttcattcggaaaaaccttccttcaccgtgggctcaag |
8345693 |
T |
|
| Q |
101 |
tcgtacgcggcggctccggctgcgatacagaatcacaatcacaatcacccaccggaattcatcaatcacttccgtcatcatcgtcttcctcctcctcttc |
200 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
8345692 |
tcgtacgcggcggctccggctgggatacagaatcacaatcacaatcacccaccggaattcatcaatcacttccgtcatcatcgtcttcctcctcctcctc |
8345593 |
T |
|
| Q |
201 |
tctcactacggtcgaccaacctcc |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
8345592 |
tctcactacggtcgaccaacctcc |
8345569 |
T |
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