View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13513_low_3 (Length: 453)

Name: NF13513_low_3
Description: NF13513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13513_low_3
NF13513_low_3
[»] chr8 (21 HSPs)
chr8 (68-438)||(13152430-13152809)
chr8 (68-385)||(27190593-27190910)
chr8 (99-385)||(28846435-28846726)
chr8 (68-385)||(14446647-14446971)
chr8 (68-237)||(9256359-9256528)
chr8 (264-438)||(9256182-9256356)
chr8 (74-327)||(24333586-24333850)
chr8 (68-189)||(30791494-30791615)
chr8 (68-201)||(16532667-16532800)
chr8 (68-201)||(21958518-21958651)
chr8 (99-185)||(10467786-10467872)
chr8 (68-168)||(10014471-10014571)
chr8 (110-190)||(42446935-42447015)
chr8 (68-143)||(32372022-32372097)
chr8 (296-385)||(23449066-23449148)
chr8 (68-143)||(32342880-32342955)
chr8 (68-143)||(32355367-32355442)
chr8 (68-143)||(32359486-32359561)
chr8 (68-138)||(40146046-40146116)
chr8 (72-141)||(34228269-34228338)
chr8 (78-136)||(2826349-2826407)
[»] chr1 (19 HSPs)
chr1 (68-385)||(14498712-14499036)
chr1 (68-385)||(9636936-9637260)
chr1 (68-385)||(30559041-30559366)
chr1 (68-383)||(48606648-48606971)
chr1 (68-237)||(52753856-52754025)
chr1 (68-201)||(25017392-25017525)
chr1 (68-200)||(26272965-26273097)
chr1 (269-385)||(52754029-52754145)
chr1 (68-182)||(35949014-35949128)
chr1 (68-201)||(40864755-40864888)
chr1 (68-189)||(21973824-21973945)
chr1 (107-201)||(17127445-17127539)
chr1 (68-201)||(32379892-32380021)
chr1 (235-356)||(30054708-30054829)
chr1 (68-181)||(30054847-30054960)
chr1 (342-385)||(30054660-30054703)
chr1 (68-140)||(17874845-17874917)
chr1 (68-105)||(28463197-28463234)
chr1 (9-45)||(14499037-14499073)
[»] chr4 (15 HSPs)
chr4 (68-385)||(31944432-31944755)
chr4 (68-203)||(53693070-53693205)
chr4 (77-201)||(27364889-27365013)
chr4 (68-201)||(12211262-12211395)
chr4 (68-201)||(4325418-4325550)
chr4 (270-385)||(24104677-24104793)
chr4 (68-162)||(3074414-3074508)
chr4 (107-201)||(55464735-55464829)
chr4 (68-201)||(42843713-42843849)
chr4 (253-326)||(51379514-51379587)
chr4 (333-385)||(17359270-17359322)
chr4 (68-143)||(8897962-8898037)
chr4 (68-115)||(1147591-1147638)
chr4 (138-196)||(1147523-1147581)
chr4 (68-143)||(10632680-10632757)
[»] chr7 (21 HSPs)
chr7 (68-385)||(9230215-9230540)
chr7 (100-407)||(43727788-43728103)
chr7 (68-385)||(23179922-23180251)
chr7 (68-193)||(26493750-26493875)
chr7 (68-201)||(27387342-27387475)
chr7 (68-201)||(19399984-19400117)
chr7 (68-201)||(45197650-45197782)
chr7 (65-197)||(18375416-18375546)
chr7 (68-200)||(38575325-38575457)
chr7 (68-201)||(8638620-8638754)
chr7 (235-327)||(25024455-25024547)
chr7 (68-140)||(14088815-14088887)
chr7 (68-140)||(14398833-14398905)
chr7 (321-377)||(5287719-5287775)
chr7 (212-327)||(5287940-5288060)
chr7 (235-317)||(24276438-24276521)
chr7 (321-385)||(25024226-25024290)
chr7 (68-134)||(25024596-25024662)
chr7 (161-201)||(23804627-23804667)
chr7 (72-140)||(25491674-25491742)
chr7 (68-111)||(9557784-9557827)
[»] chr5 (13 HSPs)
chr5 (68-380)||(3055300-3055621)
chr5 (68-385)||(8785597-8785921)
chr5 (68-384)||(27168839-27169155)
chr5 (68-206)||(1280379-1280517)
chr5 (68-327)||(11852587-11852854)
chr5 (68-182)||(203875-203989)
chr5 (68-285)||(23244606-23244831)
chr5 (68-189)||(26540691-26540812)
chr5 (68-188)||(22541905-22542025)
chr5 (68-189)||(22712935-22713048)
chr5 (68-158)||(2228964-2229054)
chr5 (68-143)||(19518978-19519053)
chr5 (321-385)||(11849702-11849766)
[»] scaffold0178 (1 HSPs)
scaffold0178 (68-385)||(17554-17879)
[»] chr2 (14 HSPs)
chr2 (68-380)||(12539393-12539712)
chr2 (68-354)||(34317509-34317797)
chr2 (68-197)||(19951867-19951996)
chr2 (68-201)||(35649696-35649829)
chr2 (68-188)||(22483568-22483688)
chr2 (68-201)||(33453224-33453357)
chr2 (68-189)||(34526370-34526491)
chr2 (68-189)||(22464688-22464809)
chr2 (83-178)||(13308745-13308840)
chr2 (69-168)||(34907624-34907723)
chr2 (68-143)||(18425997-18426072)
chr2 (350-384)||(34318088-34318122)
chr2 (68-105)||(45121334-45121371)
chr2 (68-143)||(26656377-26656452)
[»] chr6 (12 HSPs)
chr6 (68-385)||(12180561-12180886)
chr6 (68-412)||(11970747-11971098)
chr6 (68-200)||(25599159-25599294)
chr6 (68-203)||(32442010-32442142)
chr6 (68-201)||(24074418-24074551)
chr6 (68-168)||(3050902-3051002)
chr6 (68-201)||(25340451-25340584)
chr6 (68-154)||(30621226-30621311)
chr6 (270-384)||(25340298-25340408)
chr6 (319-385)||(8035704-8035770)
chr6 (255-327)||(8035479-8035551)
chr6 (72-159)||(1296557-1296644)
[»] chr3 (14 HSPs)
chr3 (68-385)||(3856912-3857237)
chr3 (68-361)||(51261817-51262118)
chr3 (69-304)||(15667868-15668111)
chr3 (68-201)||(31989035-31989168)
chr3 (68-201)||(43137133-43137265)
chr3 (68-201)||(53710404-53710537)
chr3 (68-201)||(24908429-24908562)
chr3 (301-385)||(55194863-55194947)
chr3 (68-201)||(37381905-37382038)
chr3 (68-143)||(22934835-22934910)
chr3 (68-136)||(24988849-24988917)
chr3 (305-380)||(9741407-9741480)
chr3 (121-188)||(43585836-43585903)
chr3 (68-104)||(38282510-38282546)
[»] scaffold0019 (1 HSPs)
scaffold0019 (68-193)||(134890-135015)
[»] scaffold0007 (1 HSPs)
scaffold0007 (68-201)||(259924-260057)
[»] scaffold0198 (1 HSPs)
scaffold0198 (68-173)||(1430-1535)
[»] scaffold0168 (1 HSPs)
scaffold0168 (68-189)||(15832-15953)
[»] scaffold0015 (1 HSPs)
scaffold0015 (68-201)||(214197-214330)
[»] scaffold0012 (1 HSPs)
scaffold0012 (68-189)||(197123-197244)
[»] scaffold0002 (1 HSPs)
scaffold0002 (68-285)||(435384-435616)
[»] scaffold0726 (1 HSPs)
scaffold0726 (68-136)||(954-1022)


Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-116; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 68 - 438
Target Start/End: Original strand, 13152430 - 13152809
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  13152430 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttggaataataccaacatcatcaaatgacttgaatatctcccgctcgatgtaaca 13152529  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    ||||||||||||||||||||||||| |||||||||| |   | | |||||||||||||||||||||||||     |||||||||| ||||||||||||||    
T  13152530 tatcatcaagtcattgaaccacacagcgttgatcatgttggtaacaattctttctcacgggcttataagattattttactagctttttgacatggcttga 13152629  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||| ||||||||    
T  13152630 taactggtgtacttccaacttttgttgatgttggtaatagctttggtgcaccctctattattgaagatccacaaattagaagttaaaatctaatttatta 13152729  T
Q  360 tgccatgttgtagaagtgattgtaag-nnnnnnnatgtataaagtgattgtaagnnnnnnnnatgtatgaagtgattgtt 438  Q
    | ||  ||||||||||||||||||||        ||||||||||||||||||||        ||||||||||||||||||    
T  13152730 taccccgttgtagaagtgattgtaagttttttttatgtataaagtgattgtaagttttttttatgtatgaagtgattgtt 13152809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 27190910 - 27190593
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||| ||| | | ||||||||||||||||||||||||||||||||||||| | || ||||    
T  27190910 aattaggaggtaaatgtcctttctgagacatctttgcggtgaatattcgagtaatatcaacatcatcaagtgacttgaatatctcccgctaggtgcaaca 27190811  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||||||||||| | |   | | ||||||||||| |||||||||||||     |||||||||| ||||||||||||||    
T  27190810 tatcatcaagtcattgaaccacacatcgttgatcttgtttgtaacaattctttctcgcgggcttataagattattttactagcttgttgacatggcttga 27190711  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
     |||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||        ||||| |||||||| ||||||||||| |||||||||    
T  27190710 caactggtggacttccaacttttgttgatgttggtaatagctttggtgcactcgct--------agatctacaaattagaagttaaaatcagatttatta 27190619  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    || |  ||||||||||||||||||||    
T  27190618 tgtccagttgtagaagtgattgtaag 27190593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 99 - 385
Target Start/End: Complemental strand, 28846726 - 28846435
Alignment:
Q  99 ctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccacacatcgttg 198  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  28846726 ctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcgatgtac---atcatcaagtcattgaaccacacatcgttg 28846630  T
Q  199 atcatattcataa---ttctttctcacgggcttataagatta-----ctagcttattgacatggcttgataacttgtgtacttccaacttttgttcatgt 290  Q
    ||| | ||  |||   ||||||||||||| ||||||||||||     |||||||||||||| || |||  |||| ||  |||| ||||||||||| ||||    
T  28846629 atcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggcaactggtagacttacaacttttgttgatgt 28846530  T
Q  291 tggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28846529 tggttatagctttggtgcacccgatattgttgaagatccacaaattagaagttaaaatctgatttattatgtcatgttgtagaaatgattgtaag 28846435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 14446971 - 14446647
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||| |||| ||||||||||||||||||||  ||||||||  ||| |||||||||||||||||||||||||||||||| | || | |||||||    
T  14446971 aattaggaggtgaatgtcctttccgagacctctttgcagtgaatgttagaataatatcaacatcatcaagtgacttgaatatctctctcttggtgtaaca 14446872  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat--tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttgat 260  Q
    ||||||||||||||||||||||| |||||||||| | |  | | ||||||||||| | | |||||||||     ||||||||||||||||| | |||||     
T  14446871 tatcatcaagtcattgaaccacaaatcgttgatcttgtggtaacaattctttctcgcagacttataagattattttactagcttattgacaggacttgac 14446772  T
Q  261 aacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattat 360  Q
     ||| ||| |||||||||||||||| ||||||||||||||||||||| ||||  ||| ||||||  ||||||||||| |||||||||||| |||||||||    
T  14446771 tactggtggacttccaacttttgttgatgttggtaatagctttggtgtacccaatattgttgaaattccacaaattagaagttaaaatctaatttattat 14446672  T
Q  361 gccatgttgtagaagtgattgtaag 385  Q
    |  ||||||||||||||||||||||    
T  14446671 gttatgttgtagaagtgattgtaag 14446647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 68 - 237
Target Start/End: Complemental strand, 9256528 - 9256359
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9256528 aattaggaggtaaatgtcatttgcgagacctctttgcgatgaatgttcgaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 9256429  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataattctttctcacgggcttataagatta 237  Q
    ||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  9256428 tatcatcaagtcattaaaccacacatcattgatcatattggtaattctttctcacgtgcttataagatta 9256359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 264 - 438
Target Start/End: Complemental strand, 9256356 - 9256182
Alignment:
Q  264 ttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgcc 363  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9256356 ttgtgtatttccaacttttgttgatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgcc 9256257  T
Q  364 atgttgtagaagtgattgtaagnnnnnnnatgtataaagtgattgtaagnnnnnnnnatgtatgaagtgattgtt 438  Q
    |||||| |||||||||||||||       ||||||||||||||||||||        ||||||||||||||||||    
T  9256256 atgttgaagaagtgattgtaagtttttttatgtataaagtgattgtaagttatttttatgtatgaagtgattgtt 9256182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 74 - 327
Target Start/End: Complemental strand, 24333850 - 24333586
Alignment:
Q  74 gaggtaaatgccctttccgagacctctttgcgatgaat---gttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatat 170  Q
    ||||||||| | |||||||||||||||||| | |||||   |||| ||| |||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  24333850 gaggtaaattctctttccgagacctctttgtggtgaataatgttcgaataatattaacatcatcaagtgacttgaatatctcccgctcagtgtaacatat 24333751  T
Q  171 catcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttgataa 262  Q
    ||| ||||||||||| || |||||||||||| | |   | | |||||||||||||||||||||||||     ||||||||||||||||| | ||||| ||    
T  24333750 cataaagtcattgaatcatacatcgttgatcttgttggtaacaattctttctcacgggcttataagattattttactagcttattgacaagacttgacaa 24333651  T
Q  263 cttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagat 327  Q
    |  ||| ||||||||||||| || ||||||||||||| ||||||||||| ||||| || ||||||    
T  24333650 ccggtggacttccaacttttattgatgttggtaatagttttggtgcacctgctattgtcgaagat 24333586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 30791494 - 30791615
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| ||| |||||||  |||||||||||||||||||||||||||||| |||||||    
T  30791494 aattaggtggtaaatgccctttccgagacctctttgcggtgaatgttcgaataatatcaatgtcatcaagtgacttgaatatctcccgctcggtgtaaca 30791593  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||||||||||||||||    
T  30791594 tatcatcaagtcattgaaccac 30791615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 16532667 - 16532800
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||| | || | | |||||    
T  16532667 aattaggaggtaaatgccctttccgatatctctttgcggtgaatgtttgaataatatcaacatcatcaagtgacttgaatatctctcacttggtataaca 16532766  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||||||||||||||||||    
T  16532767 tatcatcaagtcattgaaccacacatcgttgatc 16532800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 21958651 - 21958518
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||| ||||||||| |||||||||    | ||||||| ||| |||||||||||||||||||||| |||||||||| ||||| |||||||    
T  21958651 aattaggaggtaaattccctttccgcgacctcttttgagttaatgttcgaataatatcaacatcatcaagtgactcgaatatctcctgctcggtgtaaca 21958552  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||| ||||||| || |||||||    
T  21958551 tatcatcaagtcattcaaccacatattgttgatc 21958518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 10467872 - 10467786
Alignment:
Q  99 ctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaa 185  Q
    |||| ||||| |||||| ||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  10467872 ctttccgatgcatgttcgaataatatcaacatcatcaaatgacttgattatctcccgctcgatgtaacatatcatcaagtcattgaa 10467786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 10014471 - 10014571
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||||| | | |||||| || ||||||||  ||| ||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  10014471 aattaggaggtaaatgccctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaaca 10014570  T
Q  168 t 168  Q
    |    
T  10014571 t 10014571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 42447015 - 42446935
Alignment:
Q  110 atgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccaca 190  Q
    |||||||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||    
T  42447015 atgttcaaataatataaacgtcatcaagtgacttgaatatcttccgctcgatgtaacatataatcacgtcattcaaccaca 42446935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 32372097 - 32372022
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    |||||||||||||||| |||||  |||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  32372097 aattaggaggtaaatgacctttttgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgactt 32372022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 23449148 - 23449066
Alignment:
Q  296 atagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    |||||||||||||||||||||| ||| ||||||||||||||       |||||||||||||||||||| ||||||| |||||||||||||    
T  23449148 atagctttggtgcacccgctattgttaaagatccacaaatt-------aaaatctgatttattatgccctgttgtaaaagtgattgtaag 23449066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 32342955 - 32342880
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    |||||||||||||||| |||||  ||||||| |||||  ||||||||| ||| |||||||||||||||||||||||    
T  32342955 aattaggaggtaaatgacctttttgagacctttttgcagtgaatgttcgaataatatcaacatcatcaagtgactt 32342880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 32355442 - 32355367
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    |||||||||||||||| |||||  ||||||| |||||  ||||||||| ||| |||||||||||||||||||||||    
T  32355442 aattaggaggtaaatgacctttttgagacctttttgcagtgaatgttcgaataatatcaacatcatcaagtgactt 32355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 32359561 - 32359486
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    |||||||||||||||| | |||  |||||||||||||  ||||||||| ||| |||||||||||||||||||||||    
T  32359561 aattaggaggtaaatgacatttttgagacctctttgcagtgaatgttcgaataatatcaacatcatcaagtgactt 32359486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 40146046 - 40146116
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagt 138  Q
    |||||||||||| ||||| |||||||||||||||||   ||||||||| ||| ||||||||||||||||||    
T  40146046 aattaggaggtagatgccatttccgagacctctttgttgtgaatgttcgaataatatcaacatcatcaagt 40146116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 34228269 - 34228338
Alignment:
Q  72 aggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgac 141  Q
    |||||||||||||  ||||| ||||||||||| | | ||||||| ||| |||||||||||||||||||||    
T  34228269 aggaggtaaatgcaatttccaagacctctttgtggtaaatgttcgaataatatcaacatcatcaagtgac 34228338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 2826349 - 2826407
Alignment:
Q  78 taaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaa 136  Q
    ||||||||| | |||| ||||||||||| ||||||||| ||| |||||||||| |||||    
T  2826349 taaatgcccatgccgatacctctttgcggtgaatgttcgaataatatcaacattatcaa 2826407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 14499036 - 14498712
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |    
T  14499036 aattaggaggtaaatgtcctttctgagacctctttgcgatgaatgttcgaataatatcaacatcatcaaatgacttgaatatctcccgctcgatgtaaga 14498937  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataat---tctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    ||||||||||||||||| ||||| |||||||||||| ||  |||    ||||||||||| |||||||||||||     ||||||||||||||||||||||    
T  14498936 tatcatcaagtcattga-ccacaaatcgttgatcatgttggtaacaaatctttctcacgagcttataagattattttactagcttattgacatggcttga 14498838  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    | ||| |||||||||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  14498837 tgactggtgtacttccaacttttgttgatgttgataatagctttggtacacccgctattgttgaagatccacaaattaaaagttaaaatctgattaatta 14498738  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    |||| |||||||||||||||||||||    
T  14498737 tgccctgttgtagaagtgattgtaag 14498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 9637260 - 9636936
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  9637260 aattaggatgtaaatgccctttccgagacctctttgcggtgaatgttcaaataatatcaacatcatcaagtgacttgaatatcacccgctcggtgtaaca 9637161  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga----ttactagcttattgacatggcttgat 260  Q
    |||||||||||||||||||||| |||| |||||| | |   | | |||| |||||||||  |||||||||    |||||||||||||| || ||||| ||    
T  9637160 tatcatcaagtcattgaaccacgcatcattgatcttgttggtaacaattatttctcacgaacttataagattatttactagcttattggcagggctttat 9637061  T
Q  261 aacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattat 360  Q
    |||  ||| |||| ||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||| |||    
T  9637060 aaccggtggactttcaacttttgttgatgttagtaatggctttggtgcacccgctattgttgaagatccaaaaattagaagttaaaatctgatttactat 9636961  T
Q  361 gccatgttgtagaagtgattgtaag 385  Q
    ||| |||||||||||||||||||||    
T  9636960 gccttgttgtagaagtgattgtaag 9636936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 68 - 385
Target Start/End: Original strand, 30559041 - 30559366
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||  | |||  |||| || ||| || ||||||||| ||| |||||| ||||||||||||||||||||||||| |||||| |||||||    
T  30559041 aattaggaggtaaatatcatttatgagatctatttacggtgaatgttcgaataatatcagcatcatcaagtgacttgaatatctctcgctcggtgtaaca 30559140  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    |||||||||||||| ||||||||||||||||||| | || ||||   ||||||||| || ||||||||||     |||||||||||||||||  ||||||    
T  30559141 tatcatcaagtcatagaaccacacatcgttgatcttgttgataacaattctttctcgcgagcttataagaatattttactagcttattgacaaagcttga 30559240  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
     |||  ||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  30559241 caaccggtggactttcaacttttgttgatgttggtaatagctttggtgcacccgctattgttgaagatccacaaattataagttaaaatctgatttatta 30559340  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    |||| |||||||||||||||||||||    
T  30559341 tgccctgttgtagaagtgattgtaag 30559366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 68 - 383
Target Start/End: Original strand, 48606648 - 48606971
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||| |||||||||||||||||  ||||||||||||| ||| ||||  ||| |||||||||| ||||||| |||||||||||||||||||| |||||||    
T  48606648 aattatgaggtaaatgccctttcgaagacctctttgcggtgagtgtttgaataatatcaacattatcaagttacttgaatatctcccgctcggtgtaaca 48606747  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcata---attctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||||||||||| | ||  ||   |||||||| ||||  | ||||||||||     ||||  |||||||| || ||||    
T  48606748 tatcatcaagtcattgaaccacacatcgttgatcttgttggtagcaattctttcccacgaacatataagattattttactagaatattgacagggtttga 48606847  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| |||||||||||||||| || |||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  48606848 taactagtggacttccaacttttgttgattttggtaatagctttggtgcacttgctattgttgaagatccacaaattagaagttaaaatctgatttatta 48606947  T
Q  360 tgccatgttgtagaagtgattgta 383  Q
    |||||||||||||||| |||||||    
T  48606948 tgccatgttgtagaagggattgta 48606971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 52753856 - 52754025
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||| |||||||||||||||||||||||   |||||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  52753856 aattaggaggtaaataccctttccgagacctctttgcga---atgttcgaataatatcaacatcatcaaatgacttgaatatctcccgttcgatgtaaca 52753952  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataagatta 237  Q
    |||||||||||||||||||||||||||||||||||| |   | ||||||||||||||| ||||||||||||||    
T  52753953 tatcatcaagtcattgaaccacacatcgttgatcatgttggtaataattctttctcacaggcttataagatta 52754025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 25017525 - 25017392
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||| |||||||||| |||||||||||||| |||| |||| ||| |||||||||||||||||||| ||||||||||| |||||| ||||| |    
T  25017525 aattaggaggtatatgccctttctgagacctctttgcggtgaacgttcgaataatatcaacatcatcaagtgatttgaatatctctcgctcggtgtaaga 25017426  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||||||||||||||||||    
T  25017425 tatcatcaagtcattgaaccacacatcgttgatc 25017392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 68 - 200
Target Start/End: Original strand, 26272965 - 26273097
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| ||||||||||||||||| |||||||||||||    
T  26272965 aattagtaggtaattgccctttccgagacctgtttgcgatgaatgttcgaataatattaacatcatcacgtgacttgaatatctcctgctcgatgtaaca 26273064  T
Q  168 tatcatcaagtcattgaaccacacatcgttgat 200  Q
    ||||||||| ||||||||| |||||||||||||    
T  26273065 tatcatcaaatcattgaacaacacatcgttgat 26273097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 52754029 - 52754145
Alignment:
Q  269 tacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgtt 368  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  52754029 tactttcaacttttgttaatgttgataatagctttggtgcacccgctattgttgaagatccacaaattagaagttaaaatctgattaattatgccatgtt 52754128  T
Q  369 gtagaagtgattgtaag 385  Q
    |||||||||||||||||    
T  52754129 gtagaagtgattgtaag 52754145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 35949014 - 35949128
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||    
T  35949014 aattaggaggtaaatgtcctttccgagacctcttttcggtgaatgttcgaataacatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 35949113  T
Q  168 tatcatcaagtcatt 182  Q
    |||||||||||||||    
T  35949114 tatcatcaagtcatt 35949128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 40864755 - 40864888
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||||  | ||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||| | || ||| ||||| |    
T  40864755 aattaggaggtaaatgccctttctaaaacctctttgcggtgaatgttcgaataatatcaacattatcaagtgacttgaatatccctcgttcggtgtaaga 40864854  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||||||||||||||||||    
T  40864855 tatcatcaagtcattgaaccacacatcgttgatc 40864888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 21973824 - 21973945
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| ||| |||||||  ||||||||||| |||||||||||||||||  |||||||    
T  21973824 aattaggaggtaaatgccctttccgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcagtgtaaca 21973923  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||| ||||| ||||||    
T  21973924 tatcatcaaatcatttaaccac 21973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 17127539 - 17127445
Alignment:
Q  107 tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  17127539 tgaatgttcgaataatatcaacatcatcaagcgacttgaatatctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatc 17127445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 32379892 - 32380021
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| | ||| ||| ||||||||||| | ||||||| ||| |||||||||||||||||||| |||||||||||||| | | |||||||    
T  32379892 aattaggaggtaaatgtcattttcgatacctctttgcg-taaatgttcgaataatatcaacatcatcaagtgaattgaatatctcccgtttggtgtaaca 32379990  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |   ||||||||||||||||||||||||||||||    
T  32379991 t---atcaagtcattgaaccacacatcgttgatc 32380021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 30054829 - 30054708
Alignment:
Q  235 ttactagcttattgacatggcttgataacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaa 334  Q
    ||||||||||||||  | ||||||| |||  ||| |||||||||||||||| ||||||||||| | |||  |||||||||||| |||||||||||| |||    
T  30054829 ttactagcttattggtagggcttgacaaccggtggacttccaacttttgttgatgttggtaatggttttaatgcacccgctattgttgaagatccataaa 30054730  T
Q  335 ttaaaagttaaaatctgattta 356  Q
    ||| || |||||||||||||||    
T  30054729 ttagaaattaaaatctgattta 30054708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 30054960 - 30054847
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| | |||  || |||||||||||  ||| |||| ||| || |||| || |||||||||||||||||||||||||||| |||||||    
T  30054960 aattaggaggtaaatgtcatttatgatacctctttgcggagaaggttcgaataatgtcaatatgatcaagtgacttgaatatctcccgctcggtgtaaca 30054861  T
Q  168 tatcatcaagtcat 181  Q
    |||||| |||||||    
T  30054860 tatcattaagtcat 30054847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 30054703 - 30054660
Alignment:
Q  342 ttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  30054703 ttaaaatctgatttattatgccatgttgtagaagtaattgtaag 30054660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 17874917 - 17874845
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtga 140  Q
    |||||| |||||||||  |||| ||||||||||||||| ||||||||  ||| |||||||||||||| |||||    
T  17874917 aattagaaggtaaatgatcttttcgagacctctttgcggtgaatgtttgaataatatcaacatcatccagtga 17874845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 28463234 - 28463197
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcg 105  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  28463234 aattaggaggtgaatgccctttccaagacctctttgcg 28463197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 14499073 - 14499037
Alignment:
Q  9 gagatgaaacataacttgtcaatagtgatttgaatat 45  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  14499073 gagatgaaacataacttgtcaatagtgttttaaatat 14499037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 31944755 - 31944432
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| | |||| |||||||    
T  31944755 aattaggaggtaaatgccctttccgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcacactcggtgtaaca 31944656  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||||||||||| | ||  |||   |||||||||||| |||||||||||||     ||||||||||| || |||||||    
T  31944655 tatcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacgagcttataagattattttactagcttattggcagggcttga 31944556  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  31944555 taactggtggacttccaacttttgttaatgttggtaatagctttcatgcacccgctattgttgaagatccacaaattagaagttaaaatctgatttatta 31944456  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    |||||  |||||||||||||||||||    
T  31944455 tgcca--ttgtagaagtgattgtaag 31944432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 53693070 - 53693205
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  53693070 aattaagaggtgaatgccctttccgagacctctttgcgatgaatgttcgaataatatcaacatcatcaagtgccttgattatctcccgctcgatgtaaca 53693169  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcat 203  Q
    ||||||||||||||||||||||||| ||||||||||    
T  53693170 tatcatcaagtcattgaaccacacaccgttgatcat 53693205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 27365013 - 27364889
Alignment:
Q  77 gtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaa 176  Q
    ||||||||||||| |||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27365013 gtaaatgcccttttcgagacctcttttcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaa 27364914  T
Q  177 gtcattgaaccacacatcgttgatc 201  Q
    |||||| |||||||||  |||||||    
T  27364913 gtcatttaaccacacactgttgatc 27364889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 12211262 - 12211395
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| | ||| ||||||||| |||  |||||||||| ||| |||||||||||||||| |||||||||||||||| | ||| |||||||    
T  12211262 aattaggaggtaaatgtcattttcgagacctcattgaaatgaatgttcgaataatatcaacatcatcaaatgacttgaatatctcctgttcggtgtaaca 12211361  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||||||||||||||||||    
T  12211362 tatcatcaagtcattgaaccacacatcgttgatc 12211395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 4325550 - 4325418
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||| ||||||||| ||||| | | |||  ||||||||||||| |||||||||||||||||||  |||| |||||||| |||| |||||||    
T  4325550 aattaggaggtaattgccctttctgagacat-tctgctgtgaatgttcaaataatatcaacatcatcaagtgggttgattatctcccactcggtgtaaca 4325452  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||||||||||||||||||    
T  4325451 tatcatcaagtcattgaaccacacatcgttgatc 4325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 24104677 - 24104793
Alignment:
Q  270 acttccaacttttgttcatgttggtaatagctttggtgcaccc-gctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgtt 368  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  24104677 actttcaacttttgttgatgttggtgatagctttggtgcaccctgctatcgttgcatatccacaaattagaagttaaaatctgatttattatgccatgtt 24104776  T
Q  369 gtagaagtgattgtaag 385  Q
    |||||| | ||||||||    
T  24104777 gtagaaataattgtaag 24104793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 3074508 - 3074414
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatg 162  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  3074508 aattaggagataaatgcccttcctgagacctctttgcgatgaatgttcaaataatatcaacatcatcaagtgacttgattatctcccgctcgatg 3074414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 55464735 - 55464829
Alignment:
Q  107 tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||| ||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  55464735 tgaatgttcgaataatatcaacatcatcaagtgacttgattttctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatc 55464829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 42843849 - 42843713
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctc---tttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgta 164  Q
    |||||||| || ||||||||  ||||||||||   |||| | ||||||||| | | |||||||||||||||||||||||||||||||| | ||| || ||    
T  42843849 aattaggatgtcaatgccctccccgagacctcctctttgtggtgaatgttcgattaatatcaacatcatcaagtgacttgaatatctctcactcaatata 42843750  T
Q  165 acatatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||| ||||| |||||||||| |||||||    
T  42843749 acatatcatcaactcattaaaccacacattgttgatc 42843713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 51379587 - 51379514
Alignment:
Q  253 ggcttgataacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaaga 326  Q
    ||||||| |||  ||| |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  51379587 ggcttgacaaccggtggacttccaacttttgttgatgttggtaatagctttggtgcacctgctattgttgaaga 51379514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 17359322 - 17359270
Alignment:
Q  333 aattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  17359322 aattagaagttaaaatctgatttattatgccctgttgtagaagtgattgtaag 17359270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 8897962 - 8898037
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    |||||||||||||||   ||||| |||||||||||||| |||||| || ||| |||||||||||||| ||||||||    
T  8897962 aattaggaggtaaatagtctttctgagacctctttgcggtgaatgctcgaataatatcaacatcatccagtgactt 8898037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 1147638 - 1147591
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttc 115  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  1147638 aattaggaggtaaatactctttccgagacctctttgcaatgaatgttc 1147591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 1147581 - 1147523
Alignment:
Q  138 tgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccacacatcgt 196  Q
    |||||||||||||| || ||||||||||| ||||||||| ||||| ||||| |||||||    
T  1147581 tgacttgaatatcttccactcgatgtaacctatcatcaaatcattaaaccaaacatcgt 1147523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 10632680 - 10632757
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatg--aatgttcaaattatatcaacatcatcaagtgactt 143  Q
    ||||||||||||||||   |||||||||| |||||||| ||  ||||||| ||| | || ||||||||||||||||||    
T  10632680 aattaggaggtaaatgatatttccgagacttctttgcggtgaaaatgttcgaataacattaacatcatcaagtgactt 10632757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 9230540 - 9230215
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||| ||||||||    
T  9230540 aattaggaggtaaatgcccttttcgatacctctttgcgatgaatgttcgaataatatcaacatcatcaaatgacttgagtatctcccgctctatgtaaca 9230441  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||||||||| ||| |   | | |||| ||||| ||||||||||||||     |||||||||||||||||||||||||    
T  9230440 tatcatcaagtcattgaaccacacatcgttgaccatgttggtaacaattttttctaacgggcttataagattattttactagcttattgacatggcttga 9230341  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    |||||  |||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||| ||||    
T  9230340 taactgatgtatttccaacttttgttgatgttgataatagctttggtgcacccgctattgttgaatatcgacaaataagatgttaaaatctgattaatta 9230241  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    || |||||||||||||||||||||||    
T  9230240 tgtcatgttgtagaagtgattgtaag 9230215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 100 - 407
Target Start/End: Complemental strand, 43728103 - 43727788
Alignment:
Q  100 tttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccacacatcgttga 199  Q
    |||||||||||||||  ||| |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  43728103 tttgcgatgaatgtttgaataatatcaacatcatcaactgacttgaatatctcccgttcgatataacatatcatcaagtcattgaaccacacatcgttga 43728004  T
Q  200 tcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttgataacttgtgtacttccaacttttgttcatgtt 291  Q
    |||| |   | | ||||||||||||  |||||||||||     |||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||    
T  43728003 tcatgttggtaacaattctttctcataggcttataagattattttactagcttattgacatgagttgataactggtgtacttccaacttttgttgatgtt 43727904  T
Q  292 ggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaagnnnnnn 391  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||| |||||||||||||||||||||          
T  43727903 ggtaatagctttggtgcacccgctattgttgaagatccacgaattagaagttaaagtctgatttattatgccttgttgtagaagtgattgtaagtttttc 43727804  T
Q  392 natgtataaagtgatt 407  Q
     |||||||||||||||    
T  43727803 tatgtataaagtgatt 43727788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 68 - 385
Target Start/End: Original strand, 23179922 - 23180251
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||| |||||||||||| |||||| |||||||    
T  23179922 aattaggag-taaatgccctttccaagacctctttgcggtgaatgttcgaataatatcaacattatcaagtgccttgaatatctctcgctcggtgtaaca 23180020  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    ||||||||||| |||||| ||||||||||||||| | |   | | |||| ||||||||| ||||||||||     |||||||||||||| ||  ||||||    
T  23180021 tatcatcaagttattgaaacacacatcgttgatcttgttggtaacaattatttctcacgagcttataagattattttactagcttattggcaaagcttga 23180120  T
Q  260 taac---ttgtgtacttccaacttttgttcatgttggtaatagcttt--ggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatt 354  Q
    ||||   | | |||||||||||||||||| |||||||||||||||||  | | | |    | |  ||| ||||||||||||||||| ||||| ||| |||    
T  23180121 taacccgtggagtacttccaacttttgttgatgttggtaatagctttaagatacccattttgttattgtagatccacaaattaaaaattaaattctaatt 23180220  T
Q  355 tattatgccatgttgtagaagtgattgtaag 385  Q
    ||||||||  |||||||||||||||||||||    
T  23180221 tattatgctctgttgtagaagtgattgtaag 23180251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 26493750 - 26493875
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||     
T  26493750 aattaggaggtaaatgccctttccgagacctctttacggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacg 26493849  T
Q  168 tatcatcaagtcattgaaccacacat 193  Q
    ||||||||||||||| ||||||||||    
T  26493850 tatcatcaagtcatttaaccacacat 26493875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 27387342 - 27387475
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcga-tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||||||||||||||| ||||||| ||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27387342 aattaggaggtaaatgctctttccgcgacctcttt-cgagtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaac 27387440  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||||||| |||||||||| |||||||    
T  27387441 atatcatcaagtcattcaaccacacattgttgatc 27387475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 19400117 - 19399984
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcga-tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||||||||||||| ||||||||| ||||||||| ||| ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19400117 aattaggaggtaaataccctttccgcgacctcttt-cgagtgaatgttcgaataatatcaacatcatcaagcgacttgaatatctcccgctcggtgtaac 19400019  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||||||| |||||||||| |||||||    
T  19400018 atatcatcaagtcattcaaccacacattgttgatc 19399984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 45197782 - 45197650
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||| |||||||||||  |||||||||||||| | ||||||||| ||  ||||||||||| ||||||||||||||||||||| |||||||| || |    
T  45197782 aattaggatgtaaatgccctccccgagacctctttgtggtgaatgttcgaacaatatcaacatcgtcaagtgacttgaatatctcctgctcgatg-aata 45197684  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||||||||||||||||| |||||||    
T  45197683 tatcatcaagtcattgaaccacacattgttgatc 45197650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 18375546 - 18375416
Alignment:
Q  65 tcgaattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgta 164  Q
    ||||||||||| ||||||||||||| |||||||| || || |||||||||| ||| |||||||||| ||| ||||| ||||||||||||||||| |||||    
T  18375546 tcgaattaggaagtaaatgcccttttcgagacct-ttcgc-atgaatgttcgaataatatcaacattatctagtgatttgaatatctcccgctccatgta 18375449  T
Q  165 acatatcatcaagtcattgaaccacacatcgtt 197  Q
    | |||||||||||||||||||||||||||||||    
T  18375448 atatatcatcaagtcattgaaccacacatcgtt 18375416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 200
Target Start/End: Original strand, 38575325 - 38575457
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcga-tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||||||||||||||  ||||||| ||||||||| ||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  38575325 aattaggaggtaaatgttctttccgcgacctcttt-cgagtgaatgttcgaataatatcaacatcatcaagtgactttaatatctcccgctcggtgtaac 38575423  T
Q  167 atatcatcaagtcattgaaccacacatcgttgat 200  Q
    ||||||||||||| || |||||| ||| ||||||    
T  38575424 atatcatcaagtcgttcaaccacccattgttgat 38575457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 8638754 - 8638620
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacc-tctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||| | |||||||| |||||||||||||||  | ||| | ||||    
T  8638754 aattaggaggtaaatgccctttccgagaccctctttgcgttgaatgttcgaataatatcgatatcatcaaatgacttgaatatctcttgttcggtataac 8638655  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||| ||| |||||||| |||||||||    
T  8638654 atatcatcaagtaattaaaccacacgtcgttgatc 8638620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 25024547 - 25024455
Alignment:
Q  235 ttactagcttattgacatggcttgataacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagat 327  Q
    ||||||||||||| |||||| |||| || | ||| |||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||    
T  25024547 ttactagcttattaacatggattgacaattggtggacttccaacttttgttgatgctggtaatagctttggtgcatccgctattgttgaagat 25024455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 14088887 - 14088815
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtga 140  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||  ||| |||||| |||||||||||||    
T  14088887 aattaggaggtaaatgccttttccgagacctctttgcgatggatgtttgaataatatcagcatcatcaagtga 14088815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 14398905 - 14398833
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtga 140  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||  ||| |||||| |||||||||||||    
T  14398905 aattaggaggtaaatgccttttccgagacctctttgcgatggatgtttgaataatatcagcatcatcaagtga 14398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 377
Target Start/End: Complemental strand, 5287775 - 5287719
Alignment:
Q  321 tgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtg 377  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  5287775 tgaagatccacaaattagaagttaaaatctgatttattatgtcttgttgtagaagtg 5287719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 327
Target Start/End: Complemental strand, 5288060 - 5287940
Alignment:
Q  212 ttctttctcacgggcttataaga-----ttactagcttattgacatggcttgataacttgtgtacttccaacttttgttcatgttggtaatagctttggt 306  Q
    |||||||||||| |||| |||||     ||||||||||||||||| |  |||| |||  ||| |||||||||||||||| ||| ||||||||||||||||    
T  5288060 ttctttctcacgagcttgtaagattattttactagcttattgacaggatttgacaaccggtggacttccaacttttgttgatgatggtaatagctttggt 5287961  T
Q  307 gcacccgctatcgttgaagat 327  Q
     ||||||||||  ||||||||    
T  5287960 acacccgctatttttgaagat 5287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 24276438 - 24276521
Alignment:
Q  235 ttactagcttattgacatgg-cttgataacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctat 317  Q
    ||||||||||||||| |  | ||||| |||| ||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24276438 ttactagcttattgatagagtcttgacaactggtggacttccaacttttgttgatgttggttatagctttggtgcacccgctat 24276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 25024290 - 25024226
Alignment:
Q  321 tgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    |||||||| |||||||| || ||||||| |||||||| ||||| |||||||||||||||||||||    
T  25024290 tgaagatctacaaattagaatttaaaatttgatttatcatgccttgttgtagaagtgattgtaag 25024226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 25024662 - 25024596
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatc 134  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||| | ||   |||||||||||||    
T  25024662 aattaggaggtaaatgccctttctgagacctctttgtggtgaatgtccgaaacttatcaacatcatc 25024596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 23804627 - 23804667
Alignment:
Q  161 tgtaacatatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  23804627 tgtaatatatcaacaagtcattgaaccacacatcgttgatc 23804667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 25491674 - 25491742
Alignment:
Q  72 aggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtga 140  Q
    |||| ||||||||| |||  ||||||||||| |  ||||||||| ||| ||||||||||||||||||||    
T  25491674 aggaagtaaatgccttttttgagacctctttacagtgaatgttcgaataatatcaacatcatcaagtga 25491742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 9557827 - 9557784
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaat 111  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||    
T  9557827 aattaggaggtaaatcccctttcagagacctctttgcggtgaat 9557784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 1e-94; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 68 - 380
Target Start/End: Complemental strand, 3055621 - 3055300
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||| |||  |||||||| |||||  |||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  3055621 aattaggaggtaaatgccatttatgagacctcattgcgcggaatgttcgaataatatcaacatcatcaaatgacttgaatatctcccgctcgatgtaaca 3055522  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||||||||||||| |   | | |||||||||||||||||||||||||     |||||||||||||||||||||||||    
T  3055521 tatcatcaagtcattgaaccacacatcgttgatcatgttggtaacaattctttctcacgggcttataagattattttactagcttattgacatggcttga 3055422  T
Q  260 taacttgtgtacttccaac-ttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatt 358  Q
    ||||| || |||||| | |  |||||| |||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||| |||    
T  3055421 taactggtttacttctaccaatttgttgatgttgataatagctttggtgcacccgctattgttgaagatccataaattagaagttaaaatctcattaatt 3055322  T
Q  359 atgccatgttgtagaagtgatt 380  Q
    ||| ||| ||||||||||||||    
T  3055321 atgtcatattgtagaagtgatt 3055300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 8785921 - 8785597
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||   |||||| |||||||| |||||| ||||||||| ||| ||||||| |||||||| ||| |||||||||||||||| ||||||| |    
T  8785921 aattaggaggtaagaacccttttcgagacctatttgcggtgaatgttcgaataatatcaatatcatcaactgaattgaatatctcccgcttgatgtaata 8785822  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    ||| |||||||||||||||||||||||||||||| | ||  |||   ||||||||||  | ||||||||||||     |||||||||| ||  || ||||    
T  8785821 tattatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcattg-cttataagattattttactagcttattaacggggtttga 8785723  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  8785722 taactagtggacttccaacttttgttgatgttggtaatagctttggtgcacccgctattgttgaagatccacaaattagaagtttaaatctgatttatta 8785623  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    || |||| ||||||||||||||||||    
T  8785622 tgacatgctgtagaagtgattgtaag 8785597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 68 - 384
Target Start/End: Original strand, 27168839 - 27169155
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||  |||||||| || || ||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  27168839 aattaggaggtaaatgccctttatgagacctcatttcggtgaatgttcgaataatatcaacattatcaagtgacttgaatatctcccgctcggtgtaaca 27168938  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    ||| ||        |||||||||||||||||||| | ||  |||   || ||||||| |||||||||||||||     |||||||||||||| | |||||    
T  27168939 tattat--------tgaaccacacatcgttgatcttgtttgtaacaattatttctcatgggcttataagattattttactagcttattgacaagacttga 27169030  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||||||| ||||||||||  |||||||| ||||||||| |||||||||||||||||||||    
T  27169031 taactggtggacttccatcttttgttgatgttggtaatagctttggtacacccgctattattgaagattcacaaattagaagttaaaatctgatttatta 27169130  T
Q  360 tgccatgttgtagaagtgattgtaa 384  Q
    |||| ||||||||||||||||||||    
T  27169131 tgccctgttgtagaagtgattgtaa 27169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 1280517 - 1280379
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  1280517 aattaggaggtaaatgccttttccgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 1280418  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatatt 206  Q
    ||||||||| |||||||||||||||| ||||||| ||||    
T  1280417 tatcatcaaatcattgaaccacacattgttgatcttatt 1280379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 327
Target Start/End: Complemental strand, 11852854 - 11852587
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||| |||||||| | |||||  ||||||||||| | | ||||||| ||| |||||||||||||||||||| || ||||||||||| ||| |||||||    
T  11852854 aattagaaggtaaatactctttcttagacctctttgtgttaaatgttcgaataatatcaacatcatcaagtgagttaaatatctcccgttcggtgtaaca 11852755  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    ||||||||||||||||||||||||||| || ||| | |   | ||||||||||||||||| |||||||||     ||||||||||||||||| | |||||    
T  11852754 tatcatcaagtcattgaaccacacatctttcatcttgttggtaataattctttctcacggacttataagattattttactagcttattgacaggacttga 11852655  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagat 327  Q
     ||||  || | ||   ||||||||| ||||| ||||||| |||||||||||| |||| |||||||||    
T  11852654 caactgatggatttttcacttttgttgatgttagtaatagttttggtgcacccactattgttgaagat 11852587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 203989 - 203875
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  203989 aattaggaggtaaatgtcctttccgagacctctttccggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 203890  T
Q  168 tatcatcaagtcatt 182  Q
    |||||||||||||||    
T  203889 tatcatcaagtcatt 203875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 285
Target Start/End: Original strand, 23244606 - 23244831
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||| ||||| |||||||||| |||||||| ||||| | ||||||||||| |||||||||||||||||||||| ||||| || ||||||||  |||||    
T  23244606 aattagcaggtacatgccctttctgagacctcgttgcggttaatgttcaaataatatcaacatcatcaagtgactagaataacttccgctcgacataaca 23244705  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    ||||||||||||||||||| |||||||||||||| | |   | | ||||||||||||  |||||||||||     ||||||||||||||||| |||||||    
T  23244706 tatcatcaagtcattgaacgacacatcgttgatcttgttggtaacaattctttctcattggcttataagattattttactagcttattgacagggcttga 23244805  T
Q  260 taacttgtgtacttccaacttttgtt 285  Q
     |||   || | ||||||||||||||    
T  23244806 caacgaatggaattccaacttttgtt 23244831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 26540691 - 26540812
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||| ||||  |||||||| ||||||||| ||| |||||||  ||||||||||| |||||||||||||||||| |||||||    
T  26540691 aattaggaggtaaatgccctttctgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaaca 26540790  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||| ||||| ||||||    
T  26540791 tatcatcaaatcatttaaccac 26540812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 22542025 - 22541905
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatg-aatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||| ||||||||||||||||||| ||||||||| ||| | ||||||| ||| |||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  22542025 aattatgaggtaaatgccctttccgcgacctcttt-cgagggaatgttcgaataatattaacatcatcgagtgacttgaatatcttccgttcgatgtaac 22541927  T
Q  167 atatcatcaagtcattgaacca 188  Q
    |||||||||||||||| |||||    
T  22541926 atatcatcaagtcattcaacca 22541905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 22712935 - 22713048
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||||| |||||||| ||||||        ||    
T  22712935 aattaggaggtaaatgctctttctgagacctctttgcggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcccccgct--------ca 22713026  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||||||||||||||||    
T  22713027 tatcatcaagtcattgaaccac 22713048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 2229054 - 2228964
Alignment:
Q  68 aattaggaggtaaatgccctttccgaga-cctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctc 158  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| ||||||    
T  2229054 aattaggaggtaaatgccctt-cctagaacctctttgcgatgaatgttcaaataatatcaacatcatcaaatgacttaaatatcttccgctc 2228964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 19518978 - 19519053
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    ||||||| |||||||| ||||||| | ||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  19518978 aattaggtggtaaatgacctttccaatacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgactt 19519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 11849766 - 11849702
Alignment:
Q  321 tgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    |||||| |||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||    
T  11849766 tgaagacccacaaattagaagttaaaatttgagttattatgccctgttgtagaagtgattgtaag 11849702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 68 - 385
Target Start/End: Complemental strand, 17879 - 17554
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||| |||||| |||||| |||||||||||||| ||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||     
T  17879 aattaggagttaaatgtcctttcggagacctctttgcggtgaatgttcgaataatatcaacatcagcaagtgacttaaatatctcccgctcgatgtaacg 17780  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcat---aattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||||||||||| | || ||   |||| ||||| | | ||||||||||     |||||||||||||||||  | ||||    
T  17779 tatcatcaagtcattgaaccacacatcgttgatcttgttgataacaattatttctaatgagcttataagattattttactagcttattgacagagattga 17680  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| |||||||||||||||| ||||||||||||| |||||||||||| || | ||||||||||||||||||| ||| ||||||| |||||||||    
T  17679 taactggtggacttccaacttttgttgatgttggtaatagttttggtgcacccacttttgttgaagatccacaaattagaagctaaaatcggatttatta 17580  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
     |||||||||||||||||||||||||    
T  17579 cgccatgttgtagaagtgattgtaag 17554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 68 - 380
Target Start/End: Complemental strand, 12539712 - 12539393
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||  |||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||   ||||| | |||||    
T  12539712 aattaggaggtaaatgttctttccaagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatcttatgctcggt-taaca 12539614  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataagatt-----actagcttattgacatggcttga 259  Q
    |||||||||||||||||||||| ||| ||||||| | ||  |||   |||||||||||||||||||||||||     |||||||||||| || |||||||    
T  12539613 tatcatcaagtcattgaaccacgcattgttgatcttgttggtaacaattctttctcacgggcttataagattcttttactagcttattggcaaggcttga 12539514  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||| |||||||||||||||||    
T  12539513 taactggtggacttccaacttttgttgatgttggtaatagctttggtgcacccgctattgttaaagatccaaaaattagaagataaaatctgatttatta 12539414  T
Q  360 tgccatgttgtagaagtgatt 380  Q
    |||| ||||||| ||||||||    
T  12539413 tgccgtgttgtataagtgatt 12539393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 68 - 354
Target Start/End: Original strand, 34317509 - 34317797
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||| ||||  |||||||||||||| |||       ||  ||||||||||||| ||||||||||||||||||   |||| |||||||    
T  34317509 aattaggaggtaaatgctctttttgagacctctttgcggtgag------aacaatatcaacatcatgaagtgacttgaatatctcttactcggtgtaaca 34317602  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataagatt-----actagcttattgacatggcttga 259  Q
    ||||||||||||||||||||||||||| |||||| | ||  |||   |||||||||| ||  ||||||||||     |||||||||||||||  ||||||    
T  34317603 tatcatcaagtcattgaaccacacatcattgatcttgttggtaacaattctttctcatggatttataagattcttttactagcttattgacaaagcttga 34317702  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatt 354  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34317703 taactggtggacttccaacttttgttgatgttggtaatagctttggttcacccgctattgttgaagatccacaaattagaagttaaaatctgatt 34317797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 19951867 - 19951996
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||  ||| |||    
T  19951867 aattagaaggtaaatgcccttttcgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctctcgctcagtgtgaca 19951966  T
Q  168 tatcatcaagtcattgaaccacacatcgtt 197  Q
    |||| |||||||||||||||| ||||||||    
T  19951967 tatcgtcaagtcattgaaccatacatcgtt 19951996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 35649696 - 35649829
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||| ||||||| ||||| ||||| ||||||||  ||||||||  ||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  35649696 aattaggaagtaaatgtccttttcgagatctctttgcagtgaatgtttcaataatatcaacatcatcaaatgacttgaatatctcccgctcggtgtaaca 35649795  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||| ||||||||||||||    
T  35649796 tatcatcaagtcattgaacaacacatcgttgatc 35649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 22483688 - 22483568
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| ||| |||||||  ||||||||||| |||||||||||||||||| |||||||    
T  22483688 aattaggaggtaaatgccctttccgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaaca 22483589  T
Q  168 tatcatcaagtcattgaacca 188  Q
    ||||||||||||||| |||||    
T  22483588 tatcatcaagtcatttaacca 22483568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 33453224 - 33453357
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgt-aac 166  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  33453224 aattaggaggtaaatgctctttctgatacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttaaatatctcccgctcggtgtaaac 33453323  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||| || ||||||||| |||||||||||||||||    
T  33453324 atatgatgaagtcattg-accacacatcgttgatc 33453357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 34526491 - 34526370
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| ||| |||||||  ||||||||||| |||||||||||||||||| |||||||    
T  34526491 aattaggaggtaaatgccctttccgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaaca 34526392  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||| ||||| ||||||    
T  34526391 tatcatcaaatcatttaaccac 34526370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 22464809 - 22464688
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||| |||||  |||||||| ||||||||  ||| |||||||  ||||||||||| |||||||||||||||||| |||||||    
T  22464809 aattaggaggtaaatgcccttttcgagatttctttgcggtgaatgtttgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaaca 22464710  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||| ||||| ||||||    
T  22464709 tatcatcaaatcatttaaccac 22464688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 13308840 - 13308745
Alignment:
Q  83 gccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagt 178  Q
    ||||||||||||||||||||  | ||||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  13308840 gccctttccgagacctctttatggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctctcgctcggtgtaacatatcatcaagt 13308745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 34907723 - 34907624
Alignment:
Q  69 attaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacat 168  Q
    ||||||||||||||||||||| ||| || ||| | |||||||||||  ||||||||||||| ||||||||||| ||| |||||| || ||| ||||||||    
T  34907723 attaggaggtaaatgcccttttcgaaacttctctccgatgaatgtttgaattatatcaacaccatcaagtgacctgagtatctctcgttcggtgtaacat 34907624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 18425997 - 18426072
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    |||||||||||||||  | |||  ||||||||||| || ||||||||| ||| |||||||||| ||||||||||||    
T  18425997 aattaggaggtaaataacatttttgagacctctttacggtgaatgttcgaataatatcaacattatcaagtgactt 18426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 384
Target Start/End: Original strand, 34318088 - 34318122
Alignment:
Q  350 tgatttattatgccatgttgtagaagtgattgtaa 384  Q
    |||||||||||||| ||||||||||||||||||||    
T  34318088 tgatttattatgccctgttgtagaagtgattgtaa 34318122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 45121371 - 45121334
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcg 105  Q
    |||||||||||||||| | |||||||||||||||||||    
T  45121371 aattaggaggtaaatgtcttttccgagacctctttgcg 45121334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 26656377 - 26656452
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaac-atcatcaagtgactt 143  Q
    |||||||||||||||| || |||  ||| ||||||||| ||||||||| ||| |||||||| ||| |||||||||||    
T  26656377 aattaggaggtaaatgacc-ttctaagatctctttgcggtgaatgttcgaataatatcaacaatcgtcaagtgactt 26656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 4e-85; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 68 - 385
Target Start/End: Original strand, 12180561 - 12180886
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||| |||||| |||| |||||||    
T  12180561 aattagaaggtaaatgcccttcccgagacctctttgcggtgaatgttcgaataatatcaacaacatcaagtgacttgaatttctcccactcggtgtaaca 12180660  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    |||||||||||||||||||||||||  ||||||| | |   | | |||| ||||||||||||||||||||     |||| |||||||||||| |||||||    
T  12180661 tatcatcaagtcattgaaccacacaatgttgatcttgttggtaacaattttttctcacgggcttataagattattttaccagcttattgacagggcttga 12180760  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    |||||  || |||| ||||||||||| ||||| |||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  12180761 taactgatggactttcaacttttgttgatgtttgtaataactttggcgcacccgctattgttgaagatccacaaattagaagttaaaatctgattcatta 12180860  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    |||  || ||||||| ||||||||||    
T  12180861 tgctttgatgtagaaatgattgtaag 12180886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 68 - 412
Target Start/End: Complemental strand, 11971098 - 11970747
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||  |  ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  11971098 aattaggaggtaaatgccctttctgagacctcttt-cggtgaatgttcgcaaaatatcaacatcatcaagtgacttgaatatcttccgctcggtgtaaca 11971000  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttga 259  Q
    ||| |||||||||||||||||||||||||||||| |||   | | |||||||||||||   ||||||| |     ||||||| |||| ||   || ||||    
T  11970999 tatgatcaagtcattgaaccacacatcgttgatcttattggtaacaattctttctcacatacttataaaattattttactagattatagatggggtttga 11970900  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
     |||| ||| |||||  ||||||| | |||||||||||||||||| ||||||||||||  ||||||||| | |||||| || ||||||| ||||||||||    
T  11970899 caactagtggacttcatacttttgctgatgttggtaatagctttgctgcacccgctatttttgaagatctagaaattagaaattaaaatttgatttatta 11970800  T
Q  360 tgccatgttgtagaagtgattgtaagnnnnnnnatgtataaagtgattgtaag 412  Q
    |||| |||||||||||||||||||||       |||||| |||||||||||||    
T  11970799 tgccctgttgtagaagtgattgtaagtttttttatgtatgaagtgattgtaag 11970747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 25599294 - 25599159
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatga---atgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgta 164  Q
    |||||||| |||||||||||||||||||||||||||||||||   |||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  25599294 aattaggacgtaaatgccctttccgagacctctttgcgatgatgaatgttcgaataatatcaacatcatcaagtgacttgattatctcccactcgatgta 25599195  T
Q  165 acatatcatcaagtcattgaaccacacatcgttgat 200  Q
    ||||| ||||||||||||||||| ||| ||||||||    
T  25599194 acataccatcaagtcattgaaccgcacgtcgttgat 25599159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 32442010 - 32442142
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||  | | ||||| |||||||||||||||    
T  32442010 aattaagaggtaaatgccctttccgatacctctttgggatgaatgttcgaataatatcaacatcatcaagtga--ttattatcttccgctcgatgtaaca 32442107  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcat 203  Q
    |||||| ||||||||||||||||||||||| |||||    
T  32442108 tatcat-aagtcattgaaccacacatcgttaatcat 32442142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 24074551 - 24074418
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgat-gaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    |||||||||||||||| | || ||||||||||||| || | |||||||| ||| |||||||||||||||||| ||||||||||||||| |||| ||||||    
T  24074551 aattaggaggtaaatgtcatt-ccgagacctctttccggttgaatgttcgaataatatcaacatcatcaagtaacttgaatatctccccctcggtgtaac 24074453  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||  ||||||||| |||||||    
T  24074452 atatcatcaagtcattttaccacacattgttgatc 24074418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 3051002 - 3050902
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||| ||||||||| ||||||||||||||||| || ||||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3051002 aattaggtggtaaatgctctttccgagacctctttccggtgaatgtttgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 3050903  T
Q  168 t 168  Q
    |    
T  3050902 t 3050902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 25340584 - 25340451
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||| ||||| |||||||||||  | ||||||||| ||| ||||||||||||||||||||||| ||||||| || || | |||||||    
T  25340584 aattaggaggtaaatgcactttctgagacctctttatggtgaatgttcgaataatatcaacatcatcaagtgacttaaatatcttccactgggtgtaaca 25340485  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||| ||| | || |||||||| ||||||    
T  25340484 tatcatcaaatcacttaatcacacatcattgatc 25340451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 30621311 - 30621226
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctccc 154  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  30621311 aattaggaggtaaatgtcctttccgagacctcttt-cgatgaatgttcgaataatatcaacatcatcaagtgacttgattatctccc 30621226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 384
Target Start/End: Complemental strand, 25340408 - 25340298
Alignment:
Q  270 acttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttg 369  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||    | ||||||||||||| ||||| ||||||||||||||||||||||||  |||||    
T  25340408 actttcaacttttgttgatgttggtaataactttggtgaaccc----ttgttgaagatccacgaattagaagttaaaatctgatttattatgcgttgttg 25340313  T
Q  370 tagaagtgattgtaa 384  Q
    |||||||||||||||    
T  25340312 tagaagtgattgtaa 25340298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 8035704 - 8035770
Alignment:
Q  319 gttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  8035704 gttgaagatccacaaattagaagttaaaatatgatttattatgccctgttgtagaagtgattgtaag 8035770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 8035479 - 8035551
Alignment:
Q  255 cttgataacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagat 327  Q
    ||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||||    
T  8035479 cttgacaactcgtggacttccaacttttgttgatgttggtaatagctttggtgcacctgctactgttgaagat 8035551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 1296644 - 1296557
Alignment:
Q  72 aggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcg 159  Q
    |||||||||||| ||||||||||||||||||    ||||| ||  ||| |||| || |||||||||||||||||||||||||||||||    
T  1296644 aggaggtaaatggcctttccgagacctctttattgtgaatatttgaataatattaatatcatcaagtgacttgaatatctcccgctcg 1296557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 68 - 385
Target Start/End: Original strand, 3856912 - 3857237
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||   ||||| |||||||||||||| ||||||||  ||| |||||||||||||||| ||||||||||||||||| |||   ||||||    
T  3856912 aattaggaggtaaattttctttctgagacctctttgcggtgaatgtttgaataatatcaacatcatcaaatgacttgaatatctcccactctgagtaaca 3857011  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc---atattcataattctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    | ||||||||||||| ||||||||||||||||||   ||  | | |||| |||||||||||||||||||||||     |||||||||||||| |||||||    
T  3857012 tgtcatcaagtcatttaaccacacatcgttgatcttgatggtaacaattatttctcacgggcttataagattattttactagcttattgacagggcttga 3857111  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
    ||||| ||| |||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||||| |||||||||| ||||||||||    
T  3857112 taactggtggacttccaacttttgttgatgttcgtaatagctttggtgcacctgctattgttgaagatccaaaaattagaagttaaaatttgatttatta 3857211  T
Q  360 tgccatgttgtagaagtgattgtaag 385  Q
    || | | |||||||||||||||||||    
T  3857212 tgtcttattgtagaagtgattgtaag 3857237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 68 - 361
Target Start/End: Complemental strand, 51262118 - 51261817
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||  |||| | |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||   |||||||    
T  51262118 aattaggaggtaaatgttcttttcaagacctctttacgatgaatgttcgaataatatcaacatcatcaagtgacttgaatatcttccgcttagtgtaaca 51262019  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatcatattcataa---ttctttctcacgggcttataagatta-----ctagcttattgacatggcttga 259  Q
    ||||||||| |||||| ||||||| ||||||||| | ||  |||   |||||| ||||| |||||| | ||||     |||||||||||||| || ||||    
T  51262018 tatcatcaattcattgtaccacacttcgttgatcttgttggtaacaattctttttcacgagcttattatattattttactagcttattgacagggtttga 51261919  T
Q  260 taacttgtgtacttccaacttttgttcatgttggtaatagctttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttatta 359  Q
     |||| ||| |||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  51261918 caactggtggacttccaacttttgttgatgttggtaatagctttgatgcacctgctattgttgaagatccacaaattagaagttaagatctgatttatta 51261819  T
Q  360 tg 361  Q
    ||    
T  51261818 tg 51261817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 69 - 304
Target Start/End: Complemental strand, 15668111 - 15667868
Alignment:
Q  69 attaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacat 168  Q
    ||||||||||||||||| ||||||| |||||||||   || |||||| ||| ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  15668111 attaggaggtaaatgccttttccgatacctctttgttgtgcatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtataacat 15668012  T
Q  169 atcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacatggcttgat 260  Q
    |||||||||| ||||||||||||||| |||||| | |   | | |||||||||||| ||| ||||||||     ||||| ||||||||| | ||||||||    
T  15668011 atcatcaagttattgaaccacacatccttgatcttgttggtaacaattctttctcatgggtttataagattattttacttgcttattgatagggcttgat 15667912  T
Q  261 aacttgtgtacttccaacttttgttcatgttggtaatagctttg 304  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||    
T  15667911 aactagtggacttccaacttttgttgatgttggtaataggtttg 15667868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 31989168 - 31989035
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcga-tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31989168 aattaggaggtaaatgccctttccgcgacctcttt-cgagtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaac 31989070  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||||||| |||||||||| |||||||    
T  31989069 atatcatcaagtcattcaaccacacattgttgatc 31989035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 43137265 - 43137133
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||| || |||| |||||||||| |||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  43137265 aattaggaggtaaataccttttctgagacctctt-gcggcgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 43137167  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||||||||| ||||||||||||    
T  43137166 tatcatcaagtcattgaaccatacatcgttgatc 43137133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 53710537 - 53710404
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcga-tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  53710537 aattaggaggtaaatgccctttccgtgacctcttt-cgagtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaac 53710439  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    | |||||||||||||| |||||  ||| |||||||    
T  53710438 agatcatcaagtcattcaaccatccattgttgatc 53710404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 24908429 - 24908562
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcga-tgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaac 166  Q
    ||||||||||||||| ||||||||| ||||||||| ||| ||||||||| ||| ||||||||||| ||||| ||||||||||||||| ||| | ||||||    
T  24908429 aattaggaggtaaataccctttccgcgacctcttt-cgagtgaatgttcgaataatatcaacatcttcaagcgacttgaatatctcctgcttggtgtaac 24908527  T
Q  167 atatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||||||| |||||||||| |||||||    
T  24908528 atatcatcaagtcattcaaccacacattgttgatc 24908562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 301 - 385
Target Start/End: Complemental strand, 55194947 - 55194863
Alignment:
Q  301 tttggtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgattgtaag 385  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  55194947 tttggtgcacccgctattgttgaagatccacaaattagaagttaaaatctgatttattatgccctgttgtagaagtgattgtaag 55194863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 37381905 - 37382038
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||| ||||| | ||||||||||||||||||  ||||||||| ||| |||| ||||||||||| |||||||||||||||  ||||  ||||| |    
T  37381905 aattaggaggcaaatgtcatttccgagacctctttgcagtgaatgttcgaataatataaacatcatcaaatgacttgaatatctcatgctcagtgtaata 37382004  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||| ||||||| ||||||||||||||||||    
T  37382005 tatcatcgagtcatttaaccacacatcgttgatc 37382038  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 22934835 - 22934910
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgactt 143  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  22934835 aattaagaggtaaatgacctttccgagacctctttgcggtgaatgttctaataatatcaacatcatcaagtgactt 22934910  T

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Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 24988849 - 24988917
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaa 136  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  24988849 aattaggagatacatgccctttccgagacctctttgcggtgaatgttcgaataatatcaacatcatcaa 24988917  T

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Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 9741480 - 9741407
Alignment:
Q  305 gtgcacccgctatcgttgaagatccacaaattaaaagttaaaatctgatttattatgccatgttgtagaagtgatt 380  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||    
T  9741480 gtgcacccgctattgttgaagatccacaaatt-aaagttaaaatctgatttatta-gccctggtgtagaagtgatt 9741407  T

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Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 43585903 - 43585836
Alignment:
Q  121 atatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaacca 188  Q
    |||| |||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||    
T  43585903 atattaacatcgtcaagtaacttggatatctcccgctcggtgtaacatatcatcaagtcattcaacca 43585836  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 38282546 - 38282510
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgc 104  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  38282546 aattatgaggtaaatgctctttccgagacctctttgc 38282510  T

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Target: scaffold0019 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 134890 - 135015
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  134890 aattaggaggtaaatgccctttccgagacctctttccggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 134989  T
Q  168 tatcatcaagtcattgaaccacacat 193  Q
    ||||||||||||||| ||||||||||    
T  134990 tatcatcaagtcatttaaccacacat 135015  T

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Target: scaffold0007 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 260057 - 259924
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||| ||| |||||||  |||||||||||||||||||| |||||||||||||||||    
T  260057 aattaggtggtaaatgccatttccgagacctctttgcggtgaatgttcgaataatatcaatgtcatcaagtgacttgaatatatcccgctcgatgtaaca 259958  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    |||||||||||||||||||||| ||| |||||||    
T  259957 tatcatcaagtcattgaaccactcattgttgatc 259924  T

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Target: scaffold0198 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 1535 - 1430
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||||    
T  1535 aattaggaggcaaatgccatttccgagacctctttgcaatgaatgttcgaataatatcaacatcatcaagtgatttgaatatctcccgctcggtgtaaca 1436  T
Q  168 tatcat 173  Q
    ||||||    
T  1435 tatcat 1430  T

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Target: scaffold0168 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 15953 - 15832
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| ||| |||||||  ||||||||||| |||||||||||||||||| |||||||    
T  15953 aattaggaggtaaatgccctttccgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaaca 15854  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||| ||||| ||||||    
T  15853 tatcatcaaatcatttaaccac 15832  T

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Target: scaffold0015 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 214197 - 214330
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    ||||||||||||||| ||||||||| |||||||||    | ||||||| ||| |||||||||||||||||||||| |||||||||| ||||| |||||||    
T  214197 aattaggaggtaaattccctttccgcgacctcttttgagttaatgttcgaataatatcaacatcatcaagtgactcgaatatctcctgctcggtgtaaca 214296  T
Q  168 tatcatcaagtcattgaaccacacatcgttgatc 201  Q
    ||||||||||||||| ||||||| || |||||||    
T  214297 tatcatcaagtcattcaaccacatattgttgatc 214330  T

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Target: scaffold0012 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 197244 - 197123
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaaca 167  Q
    |||||||||||||||||||||| |||||  |||||||| ||||||||  ||| |||||||  ||||||||||| |||||||||||||||||| |||||||    
T  197244 aattaggaggtaaatgcccttttcgagatttctttgcggtgaatgtttgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaaca 197145  T
Q  168 tatcatcaagtcattgaaccac 189  Q
    ||||||||| ||||| ||||||    
T  197144 tatcatcaattcatttaaccac 197123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 285
Target Start/End: Original strand, 435384 - 435616
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaat--gttcaaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaa 165  Q
    |||||||||||||||| ||||| ||||||||||| ||| | |||  |||| ||| |||||||||| |||||||||||||||||||| ||||||| |||||    
T  435384 aattaggaggtaaatgtccttttcgagacctcttcgcggttaatatgttctaataatatcaacataatcaagtgacttgaatatcttccgctcggtgtaa 435483  T
Q  166 -----catatcatcaagtcattgaaccacacatcgttgatcatat---tcataattctttctcacgggcttataaga-----ttactagcttattgacat 252  Q
         ||||||||||||||||||| ||||||||  |||||| | |   | | |||| ||||||||| ||||||||||     |||||| |||||||||||    
T  435484 catatcatatcatcaagtcattgagccacacattattgatcttgttggtaacaattttttctcacgagcttataagattattttactaacttattgacat 435583  T
Q  253 ggcttgataacttgtgtacttccaacttttgtt 285  Q
    || |||| |||| ||| ||||| ||||||||||    
T  435584 gggttgacaactggtggacttcgaacttttgtt 435616  T

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Target: scaffold0726 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 1022 - 954
Alignment:
Q  68 aattaggaggtaaatgccctttccgagacctctttgcgatgaatgttcaaattatatcaacatcatcaa 136  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  1022 aattaggagataaatgccctttcggagacctctttgcggtgaatgttcgaataatatcaacatcatcaa 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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