View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13514_low_4 (Length: 366)

Name: NF13514_low_4
Description: NF13514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13514_low_4
NF13514_low_4
[»] chr1 (40 HSPs)
chr1 (25-351)||(45758499-45758825)
chr1 (25-211)||(39134644-39134831)
chr1 (25-214)||(38853528-38853716)
chr1 (25-211)||(5533317-5533501)
chr1 (25-213)||(43235690-43235878)
chr1 (25-211)||(38546960-38547144)
chr1 (25-135)||(33170764-33170874)
chr1 (32-128)||(17168968-17169064)
chr1 (32-128)||(27559649-27559745)
chr1 (32-135)||(5316692-5316795)
chr1 (32-135)||(23185439-23185542)
chr1 (25-134)||(26803953-26804059)
chr1 (32-135)||(44655753-44655856)
chr1 (37-126)||(16140072-16140161)
chr1 (32-195)||(9172962-9173124)
chr1 (32-195)||(9180944-9181106)
chr1 (25-211)||(6221683-6221865)
chr1 (30-135)||(50881440-50881545)
chr1 (30-126)||(6771801-6771897)
chr1 (32-135)||(5027561-5027664)
chr1 (32-135)||(14146312-14146415)
chr1 (32-134)||(4971617-4971719)
chr1 (32-133)||(1366878-1366979)
chr1 (38-127)||(40501796-40501885)
chr1 (32-135)||(3406430-3406533)
chr1 (32-135)||(3440287-3440390)
chr1 (32-128)||(19955729-19955825)
chr1 (31-135)||(50146307-50146411)
chr1 (32-135)||(41697135-41697238)
chr1 (41-135)||(21740935-21741029)
chr1 (27-195)||(10925894-10926060)
chr1 (37-127)||(51607445-51607536)
chr1 (45-135)||(35392295-35392384)
chr1 (55-135)||(6889646-6889726)
chr1 (55-135)||(6891492-6891572)
chr1 (55-135)||(22865459-22865538)
chr1 (32-128)||(13913485-13913583)
chr1 (32-135)||(44895664-44895761)
chr1 (92-135)||(17322621-17322664)
chr1 (88-135)||(27906727-27906774)
[»] chr5 (47 HSPs)
chr5 (25-209)||(33037774-33037958)
chr5 (25-214)||(11242238-11242424)
chr5 (37-214)||(10407467-10407642)
chr5 (37-211)||(26718871-26719043)
chr5 (37-211)||(26988615-26988787)
chr5 (25-135)||(36868872-36868982)
chr5 (25-185)||(2530846-2531003)
chr5 (25-214)||(22648657-22648842)
chr5 (25-134)||(14318382-14318491)
chr5 (25-194)||(34425897-34426064)
chr5 (25-210)||(40794249-40794433)
chr5 (32-135)||(38869359-38869462)
chr5 (29-189)||(1366470-1366628)
chr5 (25-135)||(2024638-2024748)
chr5 (37-211)||(24395745-24395916)
chr5 (32-135)||(34756362-34756465)
chr5 (40-190)||(10543682-10543829)
chr5 (25-134)||(2412082-2412191)
chr5 (38-135)||(28822338-28822435)
chr5 (30-135)||(36187875-36187980)
chr5 (32-128)||(9364292-9364388)
chr5 (32-128)||(16198797-16198893)
chr5 (32-135)||(22986554-22986657)
chr5 (32-135)||(27079012-27079115)
chr5 (32-135)||(2274891-2274994)
chr5 (32-135)||(16592070-16592173)
chr5 (32-135)||(23284058-23284161)
chr5 (32-135)||(30854330-30854433)
chr5 (32-126)||(15480094-15480188)
chr5 (37-135)||(31194608-31194705)
chr5 (32-125)||(19523200-19523293)
chr5 (95-211)||(35080694-35080806)
chr5 (44-128)||(40389539-40389623)
chr5 (55-134)||(7338023-7338102)
chr5 (32-127)||(16799331-16799426)
chr5 (27-134)||(41911614-41911721)
chr5 (91-211)||(27530543-27530672)
chr5 (87-135)||(606210-606258)
chr5 (37-128)||(7670930-7671022)
chr5 (37-121)||(27924088-27924172)
chr5 (37-135)||(31881430-31881527)
chr5 (44-135)||(17344969-17345060)
chr5 (25-195)||(15639637-15639807)
chr5 (92-130)||(22875003-22875041)
chr5 (153-206)||(2412204-2412257)
chr5 (150-211)||(14317971-14318032)
chr5 (154-195)||(22875060-22875101)
[»] chr8 (38 HSPs)
chr8 (25-211)||(7944447-7944631)
chr8 (25-205)||(5973038-5973216)
chr8 (25-211)||(11290178-11290367)
chr8 (25-213)||(15167336-15167524)
chr8 (25-192)||(34789806-34789971)
chr8 (25-213)||(15078752-15078938)
chr8 (25-211)||(39332333-39332514)
chr8 (25-185)||(8102906-8103066)
chr8 (25-210)||(41677098-41677283)
chr8 (25-212)||(14509904-14510091)
chr8 (26-135)||(8646201-8646309)
chr8 (52-209)||(30674330-30674485)
chr8 (37-214)||(34048630-34048804)
chr8 (32-135)||(41879182-41879285)
chr8 (32-135)||(45475818-45475921)
chr8 (32-134)||(5860744-5860846)
chr8 (32-128)||(42600783-42600879)
chr8 (25-112)||(5942690-5942777)
chr8 (32-135)||(23606628-23606731)
chr8 (32-135)||(30883330-30883433)
chr8 (32-134)||(23798261-23798363)
chr8 (32-135)||(2952220-2952323)
chr8 (32-135)||(10917392-10917495)
chr8 (32-135)||(13534686-13534788)
chr8 (32-135)||(13624226-13624328)
chr8 (25-126)||(5721553-5721654)
chr8 (145-214)||(5942779-5942848)
chr8 (25-133)||(25561496-25561602)
chr8 (32-135)||(37430157-37430260)
chr8 (25-130)||(23941095-23941200)
chr8 (88-204)||(34868108-34868223)
chr8 (95-211)||(38009076-38009191)
chr8 (32-135)||(3048516-3048619)
chr8 (89-134)||(9108551-9108596)
chr8 (150-218)||(29364468-29364536)
chr8 (145-211)||(34812682-34812748)
chr8 (33-70)||(38009203-38009240)
chr8 (158-211)||(38843420-38843473)
[»] chr2 (38 HSPs)
chr2 (25-214)||(16097001-16097188)
chr2 (25-210)||(21665627-21665809)
chr2 (28-211)||(28425632-28425816)
chr2 (37-214)||(24035467-24035642)
chr2 (25-214)||(38400791-38400978)
chr2 (25-207)||(12133965-12134149)
chr2 (53-217)||(42029166-42029332)
chr2 (32-135)||(12337447-12337550)
chr2 (27-185)||(13800495-13800652)
chr2 (25-211)||(16227291-16227477)
chr2 (32-135)||(29939861-29939964)
chr2 (32-134)||(10762565-10762667)
chr2 (25-210)||(7742055-7742243)
chr2 (32-130)||(24410437-24410535)
chr2 (32-135)||(9046029-9046133)
chr2 (32-135)||(3155217-3155320)
chr2 (32-135)||(4505894-4505997)
chr2 (32-135)||(6965007-6965110)
chr2 (32-127)||(8907086-8907181)
chr2 (32-135)||(26716128-26716232)
chr2 (37-128)||(27506746-27506837)
chr2 (48-135)||(34693991-34694078)
chr2 (48-135)||(34716403-34716490)
chr2 (25-195)||(11912697-11912866)
chr2 (78-211)||(11952514-11952643)
chr2 (58-135)||(40636164-40636241)
chr2 (32-135)||(7162784-7162887)
chr2 (94-209)||(22727384-22727497)
chr2 (32-126)||(3953006-3953100)
chr2 (27-101)||(37182665-37182739)
chr2 (145-214)||(37182755-37182824)
chr2 (149-210)||(12694794-12694855)
chr2 (105-194)||(44914846-44914932)
chr2 (50-134)||(10252431-10252518)
chr2 (25-106)||(22727530-22727611)
chr2 (40-111)||(480151-480222)
chr2 (58-135)||(5952716-5952791)
chr2 (88-128)||(8327674-8327714)
[»] scaffold1590 (1 HSPs)
scaffold1590 (25-201)||(193-367)
[»] chr7 (38 HSPs)
chr7 (26-214)||(2611182-2611369)
chr7 (25-210)||(6765609-6765789)
chr7 (25-211)||(12981320-12981502)
chr7 (27-211)||(23020409-23020589)
chr7 (25-211)||(7398445-7398632)
chr7 (25-135)||(27237421-27237531)
chr7 (45-217)||(38971267-38971436)
chr7 (25-211)||(12419419-12419603)
chr7 (43-211)||(23744808-23744974)
chr7 (25-181)||(36891572-36891728)
chr7 (37-133)||(36902924-36903020)
chr7 (25-211)||(23859067-23859251)
chr7 (37-134)||(9021799-9021896)
chr7 (32-135)||(18776764-18776867)
chr7 (32-135)||(29077221-29077324)
chr7 (32-135)||(48983842-48983945)
chr7 (32-135)||(8171537-8171640)
chr7 (32-135)||(20091279-20091382)
chr7 (32-128)||(10329415-10329511)
chr7 (32-135)||(38414874-38414977)
chr7 (32-126)||(12596294-12596388)
chr7 (25-211)||(18201131-18201313)
chr7 (37-127)||(20153207-20153297)
chr7 (32-130)||(24525688-24525786)
chr7 (32-135)||(10955485-10955588)
chr7 (48-211)||(21763513-21763672)
chr7 (27-195)||(9014709-9014868)
chr7 (78-195)||(9014119-9014233)
chr7 (32-128)||(23551075-23551172)
chr7 (55-135)||(26254017-26254097)
chr7 (32-135)||(19692095-19692198)
chr7 (32-128)||(47984974-47985071)
chr7 (32-127)||(8239688-8239783)
chr7 (55-134)||(33162338-33162417)
chr7 (37-135)||(28749716-28749813)
chr7 (37-97)||(17800257-17800317)
chr7 (151-214)||(26917652-26917715)
chr7 (32-74)||(25010434-25010476)
[»] chr4 (56 HSPs)
chr4 (25-206)||(52468285-52468463)
chr4 (25-211)||(36118383-36118566)
chr4 (25-210)||(39329317-39329500)
chr4 (25-211)||(27112029-27112212)
chr4 (26-214)||(24396934-24397121)
chr4 (27-211)||(10041923-10042106)
chr4 (32-135)||(32128590-32128693)
chr4 (32-195)||(47128993-47129154)
chr4 (32-135)||(54780783-54780886)
chr4 (32-135)||(2790739-2790842)
chr4 (32-135)||(10978906-10979009)
chr4 (32-135)||(43455529-43455632)
chr4 (93-214)||(30507040-30507162)
chr4 (38-132)||(36178684-36178778)
chr4 (32-134)||(38209590-38209692)
chr4 (53-214)||(39655174-39655334)
chr4 (25-209)||(40217231-40217411)
chr4 (25-211)||(51691844-51692025)
chr4 (32-135)||(16845027-16845131)
chr4 (32-128)||(34027585-34027681)
chr4 (31-134)||(35779325-35779427)
chr4 (32-127)||(37777229-37777324)
chr4 (32-135)||(48209246-48209349)
chr4 (25-206)||(36362798-36362978)
chr4 (26-130)||(2135324-2135428)
chr4 (25-218)||(37744820-37745018)
chr4 (32-135)||(32915391-32915494)
chr4 (32-135)||(34768572-34768675)
chr4 (27-113)||(4167911-4167997)
chr4 (30-123)||(5128852-5128945)
chr4 (91-211)||(24614018-24614137)
chr4 (38-126)||(37514671-37514759)
chr4 (32-135)||(54083240-54083343)
chr4 (32-126)||(1105538-1105632)
chr4 (40-125)||(13460221-13460306)
chr4 (37-135)||(35465118-35465215)
chr4 (25-130)||(45656174-45656279)
chr4 (32-135)||(19498510-19498611)
chr4 (57-128)||(10428202-10428273)
chr4 (25-132)||(15735094-15735196)
chr4 (32-111)||(40089522-40089601)
chr4 (145-211)||(4167846-4167912)
chr4 (145-211)||(11906826-11906892)
chr4 (58-135)||(17679432-17679509)
chr4 (107-195)||(5893092-5893179)
chr4 (55-135)||(16922327-16922407)
chr4 (44-135)||(16882393-16882484)
chr4 (89-135)||(9578662-9578708)
chr4 (80-128)||(23508515-23508564)
chr4 (55-135)||(51964737-51964820)
chr4 (25-120)||(29425187-29425282)
chr4 (88-135)||(55255319-55255366)
chr4 (32-74)||(24969443-24969485)
chr4 (32-74)||(38352314-38352356)
chr4 (64-120)||(11906904-11906960)
chr4 (88-128)||(24969489-24969529)
[»] scaffold0007 (1 HSPs)
scaffold0007 (25-211)||(230786-230968)
[»] scaffold0012 (2 HSPs)
scaffold0012 (26-210)||(206417-206597)
scaffold0012 (154-211)||(182436-182493)
[»] scaffold1320 (1 HSPs)
scaffold1320 (25-213)||(1348-1534)
[»] chr6 (24 HSPs)
chr6 (25-211)||(2477510-2477693)
chr6 (26-214)||(20611788-20611972)
chr6 (25-123)||(21183686-21183784)
chr6 (32-135)||(13727398-13727501)
chr6 (32-135)||(20711719-20711822)
chr6 (32-135)||(21479498-21479601)
chr6 (32-135)||(27788687-27788790)
chr6 (32-127)||(33774121-33774216)
chr6 (25-131)||(6159435-6159541)
chr6 (37-135)||(21280554-21280652)
chr6 (32-126)||(24711007-24711101)
chr6 (37-134)||(1155849-1155946)
chr6 (32-128)||(28075787-28075883)
chr6 (32-135)||(19737691-19737794)
chr6 (38-128)||(17353964-17354054)
chr6 (30-135)||(34397859-34397964)
chr6 (49-134)||(30121783-30121868)
chr6 (32-126)||(30832532-30832626)
chr6 (32-128)||(235230-235328)
chr6 (25-111)||(4036945-4037031)
chr6 (55-135)||(27314177-27314258)
chr6 (145-211)||(27994870-27994936)
chr6 (37-74)||(27994778-27994815)
chr6 (93-214)||(27131121-27131243)
[»] chr3 (39 HSPs)
chr3 (25-195)||(25855419-25855586)
chr3 (25-178)||(8420323-8420476)
chr3 (35-211)||(49393097-49393269)
chr3 (25-218)||(54574741-54574936)
chr3 (26-195)||(32319098-32319263)
chr3 (25-134)||(789933-790042)
chr3 (32-127)||(8073345-8073440)
chr3 (32-135)||(21582775-21582878)
chr3 (32-135)||(53506883-53506986)
chr3 (32-135)||(54619202-54619305)
chr3 (37-135)||(37168376-37168474)
chr3 (25-135)||(26279537-26279649)
chr3 (32-135)||(3953895-3953998)
chr3 (32-135)||(34290635-34290738)
chr3 (32-128)||(27078575-27078671)
chr3 (32-128)||(27084372-27084468)
chr3 (26-180)||(28689317-28689469)
chr3 (32-127)||(44708481-44708576)
chr3 (40-135)||(54407157-54407252)
chr3 (77-211)||(23641242-23641375)
chr3 (37-135)||(38681092-38681190)
chr3 (32-126)||(47467688-47467782)
chr3 (32-128)||(50939239-50939335)
chr3 (40-135)||(9878686-9878781)
chr3 (32-135)||(42098805-42098908)
chr3 (32-135)||(43207237-43207339)
chr3 (37-135)||(36716024-36716122)
chr3 (37-135)||(18372488-18372590)
chr3 (32-135)||(53149313-53149416)
chr3 (37-128)||(36605974-36606065)
chr3 (59-135)||(42453435-42453511)
chr3 (29-135)||(52374657-52374763)
chr3 (144-211)||(36179482-36179549)
chr3 (67-135)||(50258622-50258690)
chr3 (153-211)||(52973437-52973495)
chr3 (25-101)||(29598104-29598179)
chr3 (32-99)||(29620423-29620490)
chr3 (32-74)||(48157143-48157185)
chr3 (88-128)||(48157189-48157229)
[»] scaffold0097 (1 HSPs)
scaffold0097 (25-213)||(38919-39108)
[»] scaffold0022 (2 HSPs)
scaffold0022 (25-185)||(40079-40240)
scaffold0022 (25-185)||(138139-138300)
[»] scaffold0039 (1 HSPs)
scaffold0039 (32-135)||(106539-106642)
[»] scaffold0182 (2 HSPs)
scaffold0182 (25-134)||(23993-24102)
scaffold0182 (156-211)||(23925-23980)
[»] scaffold0018 (1 HSPs)
scaffold0018 (25-129)||(173515-173619)
[»] scaffold0070 (1 HSPs)
scaffold0070 (32-135)||(1344-1447)
[»] scaffold0003 (2 HSPs)
scaffold0003 (25-108)||(351360-351443)
scaffold0003 (147-195)||(351276-351324)
[»] scaffold0902 (1 HSPs)
scaffold0902 (107-197)||(4402-4490)
[»] scaffold0227 (2 HSPs)
scaffold0227 (25-99)||(16021-16095)
scaffold0227 (89-127)||(16123-16161)
[»] scaffold0001 (1 HSPs)
scaffold0001 (76-126)||(183105-183155)


Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 25 - 351
Target Start/End: Original strand, 45758499 - 45758825
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45758499 ggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaac 45758598  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgaccatgcgtaaga 224  Q
    |||||||||||        ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||     
T  45758599 attgttcttttaaaaaaaatatacatttttattttatttcggacctcttttcacttacagagccgagcctctggattcgtaggaacggccatgcgtaagt 45758698  T
Q  225 tatttacgttatcaaaacaaacagatggactgcaagcatataccaagtttagttttttatattgtgtgagaaatatcatagagtgttgatgtagttagaa 324  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45758699 tatttacgttatcaaaacaaatggatggactgcaagcatataccaagtttagttttttatattgtgtgagaaatatcatcgagtgttgatgtagttagaa 45758798  T
Q  325 tttagccaagttattgattgatgatgt 351  Q
    |||||||||||||||||||||||||||    
T  45758799 tttagccaagttattgattgatgatgt 45758825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 39134831 - 39134644
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatc-ttttaaaaaatttaaatagaa 123  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||||||||   |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39134831 ggtttgaggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaa 39134732  T
Q  124 cattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||||         |||| |||||||||||||||| | |||||||||||||| || ||||||||| |||||||||||||||    
T  39134731 cattgttcttttaaaaaaaaaatacgtttttattttattacgagtctcttttcacttacggagccgagcctccggattcgtaggaacg 39134644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 38853528 - 38853716
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  38853528 ggtttgaggtt-ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaac 38853626  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    | |||||||||         ||||||||||||||||||| | ||||| ||||||||| ||| ||||| |||||  ||||||| |||||||    
T  38853627 actgttcttttaaaaaaaaaatacatttttattttattatgtgcctcatttcacttatagagccgagtctctgatttcgtagaaacgacc 38853716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 5533317 - 5533501
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt-aaaaaatttaaatagaa 123  Q
    |||||||| || |||||||||||||||||||||||||||||||  |||||| |||||||||  |||||||| |||||||||| |||||||||||||||||    
T  5533317 ggtttgagtttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaa 5533416  T
Q  124 cattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
     |||||||||||         ||||||||||||||||||||||| |||||||||||||||||  | |||||| |||||||||| ||||    
T  5533417 tattgttcttttaaaaaa---atacatttttattttattacgggtctcttttcacttacagagtcaagcctccggattcgtagaaacg 5533501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 43235878 - 43235690
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttt--taaaaaatttaaataga 122  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||   ||||||||||||||||    
T  43235878 ggtttgaggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaataga 43235779  T
Q  123 acattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgac 213  Q
    ||||| ||||||          |||||||||||||||||||| |||||||||||||||||| |  ||||  |  |||||||||||||||||    
T  43235778 acatttttcttt--agaaaaaaatacatttttattttattacaggcctcttttcacttacaaagtcgagtattcggattcgtaggaacgac 43235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 38547144 - 38546960
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||| | ||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  38547144 ggtttgaggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaac 38547045  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||| |||||          || | |||||||||||||||||||| |||||||||| |||| |||| ||||   |||||||||||||    
T  38547044 attgatcttt--aaaaaaaaattcctttttattttattacgggccccttttcacttgcagagccgatcctccaaattcgtaggaacg 38546960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 33170764 - 33170874
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||| |||||||||  |||||||||||||||||| |||    
T  33170764 ggtttaaggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataac 33170863  T
Q  125 attgttctttt 135  Q
    |||||| ||||    
T  33170864 attgttttttt 33170874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 17168968 - 17169064
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| |||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17168968 ggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatataaatagaacattg 17169064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 27559649 - 27559745
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  27559649 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattg 27559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 5316692 - 5316795
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  5316692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 5316791  T
Q  132 tttt 135  Q
    ||||    
T  5316792 tttt 5316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 23185439 - 23185542
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  23185439 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 23185538  T
Q  132 tttt 135  Q
    ||||    
T  23185539 tttt 23185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 26803953 - 26804059
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||   ||||||||| ||| |||||||||||||||||||||||||||||| | |    
T  26803953 ggtttgaggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagc 26804049  T
Q  125 attgttcttt 134  Q
    ||||||||||    
T  26804050 attgttcttt 26804059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 44655753 - 44655856
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||    
T  44655753 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctc 44655852  T
Q  132 tttt 135  Q
    ||||    
T  44655853 tttt 44655856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 16140072 - 16140161
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    ||||||||||||||||| |||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16140072 ctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaatagaacat 16140161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 9173124 - 9172962
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||||||| |||||  |||||||||  |||||| ||||||||||||||||||| ||||||||||||||||     
T  9173124 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt- 9173026  T
Q  132 ttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||         ||||||||||| ||||| || |||||||||||| |  |||| |||||||||    
T  9173025 ttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctc 9172962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 9181106 - 9180944
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||||||| |||||  |||||||||  |||||| ||||||||||||||||||| ||||||||||||||||     
T  9181106 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt- 9181008  T
Q  132 ttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||         ||||||||||| ||||| || |||||||||||| |  |||| |||||||||    
T  9181007 ttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctc 9180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 6221683 - 6221865
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||| |||||| || |||||||||| ||| | |||||  | |||||||  ||| ||||||||||||||| |||||||||||||||||    
T  6221683 ggtttgaggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaac 6221781  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||          ||| ||||||||||||||||||| ||||||||| ||||||||||||| |||  ||||||||| ||||    
T  6221782 attgttcttt---aaaaaaaataaatttttattttattacgggtctcttttcatttacagaaccgagtctccagattcgtagaaacg 6221865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 50881440 - 50881545
Alignment:
Q  30 gaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgt 129  Q
    |||||| ||||||||||| ||||| |||||||||| | | |||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||||||     
T  50881440 gaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgc 50881539  T
Q  130 tctttt 135  Q
    ||||||    
T  50881540 tctttt 50881545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 6771801 - 6771897
Alignment:
Q  30 gaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||||| ||| ||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  6771801 gaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 6771897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 5027561 - 5027664
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||| |||| |||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  5027561 ggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 5027660  T
Q  132 tttt 135  Q
    ||||    
T  5027661 tttt 5027664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 14146312 - 14146415
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||| || |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  14146312 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 14146411  T
Q  132 tttt 135  Q
    ||||    
T  14146412 tttt 14146415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 4971719 - 4971617
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||| | |||||||||  |||||||||   ||||||||||||||||||||||||| |||||||||||||| ||    
T  4971719 ggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgctc 4971620  T
Q  132 ttt 134  Q
    |||    
T  4971619 ttt 4971617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 1366979 - 1366878
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||| ||||||||||||| ||||||| ||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  1366979 ggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 1366880  T
Q  132 tt 133  Q
    ||    
T  1366879 tt 1366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 40501885 - 40501796
Alignment:
Q  38 tcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||| ||||    
T  40501885 tcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagatcatt 40501796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 3406430 - 3406533
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||  | ||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  3406430 ggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 3406529  T
Q  132 tttt 135  Q
    ||||    
T  3406530 tttt 3406533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 3440390 - 3440287
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||  | ||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  3440390 ggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 3440291  T
Q  132 tttt 135  Q
    ||||    
T  3440290 tttt 3440287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 19955729 - 19955825
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||  |||||||||   ||||| ||||||||||||||||||| |||||||| |||||    
T  19955729 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagatcattg 19955825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 50146307 - 50146411
Alignment:
Q  31 aggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgtt 130  Q
    ||||| |||||||||| |||| ||||||| |||||||||| ||  ||||||| ||  ||||||| |||||||||| ||||| ||||||||||||||||||    
T  50146307 aggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgtt 50146406  T
Q  131 ctttt 135  Q
    |||||    
T  50146407 ctttt 50146411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 41697238 - 41697135
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||| | ||| |||||  ||||||||| | || |||||||||||||||||||||| |||||||||||| | ||    
T  41697238 ggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacatcgctc 41697139  T
Q  132 tttt 135  Q
    ||||    
T  41697138 tttt 41697135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 21741029 - 21740935
Alignment:
Q  41 tgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||| |||||| |||||||||| ||||||||   |||||||||  ||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctctttt 21740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 195
Target Start/End: Complemental strand, 10926060 - 10925894
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaa-atttaaatagaaca 125  Q
    ||||||| | ||||||||||||||||||||||||| |||||| || |   |||||||||  ||| |||||||||| ||||||||| | |||||||||| |    
T  10926060 tttgaggatcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaatacttaaatagaata 10925961  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||||||||         |||  ||||||||||||||||||| |||||||||||| |||  ||||||||    
T  10925960 ttgttcttttaaaaaa---ataagtttttattttattacgggcttcttttcacttagagagtcgagcctc 10925894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 51607536 - 51607445
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatac-aacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    ||||||||||||||||| |||||||| |||||||||||  |||||||||   |||||| ||||||||||||||||||| |||||| ||||||    
T  51607536 ctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaatataaataaaacatt 51607445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 35392295 - 35392384
Alignment:
Q  45 tacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||||||||||||| | |||  |||||||||  |||||||||||||||  |||||||||||||||| |||||| |||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacattattctttt 35392384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 6889646 - 6889726
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||| ||| |||||  ||||||||| | || |||||||||||||||||||||| |||||||||||||| ||||||    
T  6889646 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt 6889726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 6891492 - 6891572
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||| ||| |||||  ||||||||| | || |||||||||||||||||||||| |||||||||||||| ||||||    
T  6891492 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt 6891572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 22865538 - 22865459
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||||||   ||||||| | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 22865459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 13913583 - 13913485
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaa--caccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||||||||||||||||| |||||||| ||| |||||||  |||||||||    || ||| ||||||||||||||||||| |||||||| |||||    
T  13913583 ggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaatataaatagatcattg 13913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 44895664 - 44895761
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||       |  |||||| ||||||||||||||||||| |||||||| |||||||     
T  44895664 ggttcctcatgtatacggtaatcattttcacctttgggtgtaccacc------cgccaccttatatttatcttttaaaaaatataaatagatcattgttt 44895757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 17322664 - 17322621
Alignment:
Q  92 ttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  17322664 ttgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 27906774 - 27906727
Alignment:
Q  88 caccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  27906774 caccttgtatttatcttttaaaaaatataaatggaacattgctctttt 27906727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 33037774 - 33037958
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| |||    
T  33037774 ggtttgaggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaac 33037873  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaa 209  Q
    |||||||||||        |||||||||||||||||||||| ||||||||||  ||||||| ||||||||||| |||||||||||    
T  33037874 attgttcttttaaaaaatatatacatttttattttattacgagcctcttttcggttacagagccgagcctctgaattcgtaggaa 33037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 11242424 - 11242238
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||| || |||||| ||||  ||||||||||| ||  ||||||||||||||||||||| |||||||||||    
T  11242424 ggtttgaggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaac 11242325  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    |||||||||||         |||| |||||||||||||||| | ||||||||||||||||| ||||||||| |||||| |||||||||||    
T  11242324 attgttcttttaaaaga---atacgtttttattttattacgagtctcttttcacttacagagccgagcctccggattcataggaacgacc 11242238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 10407467 - 10407642
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttn 136  Q
    |||||| |||||||||| |||||||| ||| | |||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||     
T  10407467 ctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattgttctttta 10407566  T
Q  137 nnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
            |||| |||||||||||||| || |||||||||||||| |||||||| ||||| |||||||||||||||||    
T  10407567 aaaaaa--atacttttttattttattatggacctcttttcacttatagaaccgaacctctagattcgtaggaacgacc 10407642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 37 - 211
Target Start/End: Complemental strand, 26719043 - 26718871
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttn 136  Q
    ||||||||| ||||||||||||||||||||| |||||   ||||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||      
T  26719043 ctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt-- 26718946  T
Q  137 nnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
            |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  26718945 aaaaaaaaatacgtttttattttattacgggtctcttttcacttacagaaccgagcctccggattcataggaacg 26718871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 37 - 211
Target Start/End: Complemental strand, 26988787 - 26988615
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttn 136  Q
    ||||||||| ||||||||||||||||||||| |||||   ||||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||      
T  26988787 ctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt-- 26988690  T
Q  137 nnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
            |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  26988689 aaaaaaaaatacgtttttattttattacgggtctcttttcacttacagaaccgagcctccggattcataggaacg 26988615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 36868982 - 36868872
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  36868982 ggtttgagattcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaac 36868883  T
Q  125 attgttctttt 135  Q
    |||||||||||    
T  36868882 attgttctttt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 2531003 - 2530846
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||   |||||||| |||| ||||||||||||||||||||| |||||||||||    
T  2531003 ggtttgaggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaac 2530904  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacaga 185  Q
    ||| |||||||         |||||||||||||||||||||||||||||||||||||||||    
T  2530903 att-ttcttttaagaaaa--atacatttttattttattacgggcctcttttcacttacaga 2530846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 22648842 - 22648657
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||||||||| || ||||| ||||||||| |||||||||| ||| | |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  22648842 ggtttgaggtttcttatttatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaac 22648743  T
Q  125 attgttcttttnnnnnnnntatacattttta-ttttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    |||||||||          |||||||||||| ||||||||| ||| ||||||||||||||| | |||| ||| ||||||||||||||||||    
T  22648742 attgttctt----aaaaaatatacatttttatttttattacaggcttcttttcacttacag-agcgagtctccggattcgtaggaacgacc 22648657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 14318491 - 14318382
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||  ||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14318491 ggtttgaggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 14318392  T
Q  125 attgttcttt 134  Q
    ||||||||||    
T  14318391 attgttcttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 34425897 - 34426064
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||||||| ||||||| | |||| ||||||  ||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  34425897 ggtttgaggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaac 34425996  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcct 194  Q
    |||||||||||         ||||||||||||||||||||  | || |||||||||||||||||||||||    
T  34425997 attgttcttttaaaaaag--atacatttttattttattacatgtcttttttcacttacagaaccgagcct 34426064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 40794433 - 40794249
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  | |||| |||  | | |||||||| |||||||||||||||||||| |||    
T  40794433 ggtttgaggtttctcatgtatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaac 40794334  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    |||||||||||         | || |||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||| ||||    
T  40794333 attgttcttttaaaaaaaa-aaacgtttttattttattacgagcctcttttcacttacagagccgagcctccgaattcgtatgaac 40794249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 38869462 - 38869359
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||    
T  38869462 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctc 38869363  T
Q  132 tttt 135  Q
    ||||    
T  38869362 tttt 38869359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 1366628 - 1366470
Alignment:
Q  29 tgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    ||||||| ||||| |||||||||||||||||||| ||| ||||||   ||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  1366628 tgaggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattg 1366529  T
Q  129 ttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccg 189  Q
    |||||||         |||| |||||||||| |||||| |||||||| |||||||||||||    
T  1366528 ttcttttaaaaaaa--atacgtttttatttttttacggacctctttttacttacagaaccg 1366470  T

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Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 2024748 - 2024638
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||| | |||||||||| |||||||||||||| |||||||||||  ||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  2024748 ggtttgaggatcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaac 2024649  T
Q  125 attgttctttt 135  Q
    |||||||||||    
T  2024648 attgttctttt 2024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 211
Target Start/End: Original strand, 24395745 - 24395916
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttn 136  Q
    ||||| |||||||| ||||||||||||||||| ||||    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||      
T  24395745 ctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattatttttt-- 24395842  T
Q  137 nnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
            |||||||||||||||||||||||  |||||| | ||||||| |||  |||| |||||||||||||||    
T  24395843 -aaaaaaaatacatttttattttattacgggtttctttttatttacagagccgtacctccggattcgtaggaacg 24395916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 34756465 - 34756362
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  34756465 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 34756366  T
Q  132 tttt 135  Q
    ||||    
T  34756365 tttt 34756362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 10543682 - 10543829
Alignment:
Q  40 atgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnn 139  Q
    ||||||||||||||||||||||||||||| ||||   |||||||||| |||||| ||||||||||||||||||||||| | ||||||| ||||||         
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacattattcttt---aa 10543778  T
Q  140 nnnntatacatttttattttattacgggcctcttttcacttacagaaccga 190  Q
         ||||||||||||||||||||||  ||||||||||||| ||||||||    
T  10543779 aaaaaatacatttttattttattacggatctcttttcacttatagaaccga 10543829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 2412082 - 2412191
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||| || |   ||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  2412082 ggtttgaggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaac 2412181  T
Q  125 attgttcttt 134  Q
    ||||||||||    
T  2412182 attgttcttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 28822435 - 28822338
Alignment:
Q  38 tcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  28822435 tcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 28822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 36187980 - 36187875
Alignment:
Q  30 gaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgt 129  Q
    |||||||||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||| ||||||||||| |||||||||||| |     
T  36187980 gaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaacatcgc 36187881  T
Q  130 tctttt 135  Q
    ||||||    
T  36187880 tctttt 36187875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 9364292 - 9364388
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| ||||||||||||||    
T  9364292 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 9364388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 16198893 - 16198797
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| |||||||||||||||||||   ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  16198893 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattg 16198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 22986657 - 22986554
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||||||||||||||||||||| |||||||||| |||||||||  ||||||||| |||| |||||||| ||||||||||||| | |||||||||||| ||    
T  22986657 ggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgctc 22986558  T
Q  132 tttt 135  Q
    ||||    
T  22986557 tttt 22986554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 27079012 - 27079115
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||| ||||| |||||||||||| |||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  27079012 ggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 27079111  T
Q  132 tttt 135  Q
    ||||    
T  27079112 tttt 27079115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 2274891 - 2274994
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||| ||||||||||||| |||||||||| |||||||||  ||||||||| | ||||||||||||||||||||||||| |||||||||||| | ||    
T  2274891 ggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacatcgctc 2274990  T
Q  132 tttt 135  Q
    ||||    
T  2274991 tttt 2274994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 16592173 - 16592070
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||  ||||||||| ||||| ||||||||||||||| ||||| |||||||||||||| ||    
T  16592173 ggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatataaatagaacattgctc 16592074  T
Q  132 tttt 135  Q
    ||||    
T  16592073 tttt 16592070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 23284161 - 23284058
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||  ||||||||| ||||||||||||||   |||||||||| |||||||||||||| ||    
T  23284161 ggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattgctc 23284062  T
Q  132 tttt 135  Q
    ||||    
T  23284061 tttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 30854330 - 30854433
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| |||||||||||| |||| |||||||||| || ||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  30854330 ggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 30854429  T
Q  132 tttt 135  Q
    ||||    
T  30854430 tttt 30854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 15480188 - 15480094
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| |||||| |||||||||| |||||||||| |||||||||  ||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  15480188 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatataaatagaacat 15480094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 31194705 - 31194608
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| |||||||||| ||||| |||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31194705 ctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 19523200 - 19523293
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||| |||||||||| |||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||    
T  19523200 ggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 19523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 35080806 - 35080694
Alignment:
Q  95 tatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcct 194  Q
    |||||||||||||||||||||||||| ||||||||||||||         | | |||||||||||||||||| ||||||||||||||||||  |||||||    
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttcttttaaaaa----aaatatttttattttattacggccctcttttcacttacagagtcgagcct 35080711  T
Q  195 ctggattcgtaggaacg 211  Q
    || ||||||||||||||    
T  35080710 ctagattcgtaggaacg 35080694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 40389623 - 40389539
Alignment:
Q  44 atacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||||| |||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  40389623 atacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattg 40389539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 7338023 - 7338102
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    |||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  7338023 attttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 16799426 - 16799331
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||| ||||||||||||||| | ||||||||||||||||||||  |||||||||  |||||| ||||||| ||||||||||| |||||||||||||    
T  16799426 ggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaacatt 16799331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 41911721 - 41911614
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    ||||||||| ||||| |||||| |||||||||| || |||||||||||  | ||||||| ||||||||||||| |||||||||||| |||| | ||||||    
T  41911721 tttgaggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaaattaagttgaacat 41911622  T
Q  127 tgttcttt 134  Q
    ||||||||    
T  41911621 tgttcttt 41911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 27530543 - 27530672
Alignment:
Q  91 cttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntata---------catttttattttattacgggcctcttttcactta 181  Q
    |||||||| ||||||||||||||||||||||||||||||||||||        || |         ||||||||||||||||||||||||||||||||||    
T  27530543 cttgtattaatcttttaaaaaatttaaatagaacattgttctttttttttttttaaaaaaaaaaaacatttttattttattacgggcctcttttcactta 27530642  T
Q  182 cagaaccgagcctctggattcgtaggaacg 211  Q
     ||||||||||||||  |||||||||||||    
T  27530643 tagaaccgagcctctaaattcgtaggaacg 27530672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 606210 - 606258
Alignment:
Q  87 acaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  606210 acaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 7670930 - 7671022
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt-aaaaaatttaaatagaacattg 128  Q
    ||||||||||||||||| ||||||||||||||||||||   | ||||||  |||||| |||||||||||| ||||||| ||||||||||||||    
T  7670930 ctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaatataaatagaacattg 7671022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 27924088 - 27924172
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatag 121  Q
    ||||||||||||||||| ||||| |||||||| |||||  |||||||||  |||||| ||||||||||||||||||| |||||||    
T  27924088 ctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 31881527 - 31881430
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| ||||||| || ||| ||| |  |||||||||  |||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  31881527 ctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 17344969 - 17345060
Alignment:
Q  44 atacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||| ||||| | ||||||||||||  |||||| |  ||| |||||||||||  | ||||||||||||||||||||||||| ||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacattgttatttt 17345060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 15639637 - 15639807
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatt---taaatag 121  Q
    ||||| ||||| || |||||||||  ||||||||||| |||||| ||||   |||||||||  |||||||||||||||||| ||||||     ||||| |    
T  15639637 ggtttaaggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaaaaaaataaattg 15639736  T
Q  122 aacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    |||||||||||||          | |||||||||||| ||||||||| | |||||||||| |||||||||||||    
T  15639737 aacattgttctttaaaaaaaa--aaacatttttattt-attacgggcttattttcacttatagaaccgagcctc 15639807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 22875003 - 22875041
Alignment:
Q  92 ttgtatttatcttttaaaaaatttaaatagaacattgtt 130  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaatattgtt 22875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 2412204 - 2412257
Alignment:
Q  153 ttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtag 206  Q
    |||||||||||||| |||||||||||||||||| ||  ||||| | ||||||||    
T  2412204 ttattttattacggacctcttttcacttacagagccttgcctccgaattcgtag 2412257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 14318032 - 14317971
Alignment:
Q  150 tttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||| ||||||  | |||||||||| ||||||||||||| | ||||||| |||||    
T  14318032 tttttattttaatacgggtatattttcacttatagaaccgagcctccgaattcgtaagaacg 14317971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 22875060 - 22875101
Alignment:
Q  154 tattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||||||||| |  |||||||||||||||||||||||||||    
T  22875060 tattttattactgttctcttttcacttacagaaccgagcctc 22875101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 6e-56; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 7944631 - 7944447
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||    
T  7944631 ggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaac 7944532  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||         |||||||||||||||||||||| |||||||||| |||||||| ||||| ||  ||||||||||||||    
T  7944531 attgttcttttaaaaaaa--atacatttttattttattacggacctcttttcaattacagaatcgagcttcctgattcgtaggaacg 7944447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 5973216 - 5973038
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||| ||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5973216 ggtttgaggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 5973117  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgta 205  Q
    |||||||||||         |||||||||||||||||||| | |||||||||| ||||||| || |||||| ||| |||||    
T  5973116 attgttcttttaaaacga--atacatttttattttattacagacctcttttcatttacagagccaagcctccggaatcgta 5973038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 11290178 - 11290367
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  11290178 ggtttgaggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaac 11290277  T
Q  125 attgttctttt---nnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||            | ||||||||||||||||||  | ||||||||||||||| |  |||| ||||| |||||||||||||    
T  11290278 attgttcttttaaaaaaaaaaaaaaacatttttattttattacatgtctcttttcacttacaaagtcgagtctctgaattcgtaggaacg 11290367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 15167524 - 15167336
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||   |||||||||||||| || ||||||||||||||||||||||||||||||    
T  15167524 ggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaac 15167425  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgac 213  Q
    |||||||||||         |||| ||||||||||||||||| | | |||||||||||||| | ||||||   ||||||||||||||||    
T  15167424 attgttcttttaaaaataaaatacgtttttattttattacggactttttttcacttacagagcagagccttcagattcgtaggaacgac 15167336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 34789971 - 34789806
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||||    
T  34789971 ggtttgatatttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaac 34789872  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagc 192  Q
    || ||||||||         |||||||||||||||||||||| ||| |||||||||| ||| ||||||    
T  34789871 atcgttcttttaaaaaaa--atacatttttattttattacggaccttttttcacttatagagccgagc 34789806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 15078752 - 15078938
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||| | |||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  15078752 ggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaac 15078851  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgac 213  Q
    ||| |||||||         |||| ||||||||||||||||| | |||||||||||||||| | ||||||   ||||||||||||||||    
T  15078852 attattcttttaaaaaaa--atacgtttttattttattacggacttcttttcacttacagagcagagccttcagattcgtaggaacgac 15078938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 39332514 - 39332333
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||  | ||||||  |||||||||||||||||||| ||||| |||||||||||    
T  39332514 ggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaac 39332415  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||          | || |||||||||||||||| | |||||||||| |||||||||||||||| | |||||||||||||    
T  39332414 attgttcttt-----aaaaaaaacttttttattttattacgagtctcttttcacctacagaaccgagcctccgaattcgtaggaacg 39332333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 8102906 - 8103066
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||||||||||||| |||    
T  8102906 ggtttgaggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataac 8103005  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacaga 185  Q
    ||| || ||||         |||||||||||||||||||  |||||||||||| |||||||    
T  8103006 attattattttaagaaaaaaatacatttttattttattataggcctcttttcatttacaga 8103066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 41677283 - 41677098
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaa-aaaatttaaatagaa 123  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | ||||   ||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  41677283 ggtttgaggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaa 41677184  T
Q  124 cattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    ||||||||||||         |||| ||||||||||||||  || ||||||||||| ||||| ||||||||| | ||||||||||||    
T  41677183 cattgttcttttaaaaaaaa-atacgtttttattttattataggtctcttttcactcacagagccgagcctccgaattcgtaggaac 41677098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 14510091 - 14509904
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgatttt-cacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaa 123  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||||||||  | ||||||| ||||||| ||||| ||||||||||||||||||| |||    
T  14510091 ggtttgaggttactcatgtatacggtagtgatttttcacatttgggtgtac--cgtatatacgacaccttatatttgtcttttaaaaaatttaaattgaa 14509994  T
Q  124 cattgttcttt-tnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacga 212  Q
    |||||||||||           |||||||||||||||||||||||||| ||||||||| |||||||||  |||   ||||||||||||||    
T  14509993 cattgttctttaaaaaaaaaaaatacatttttattttattacgggcctattttcacttgcagaaccgaatctccaaattcgtaggaacga 14509904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 8646201 - 8646309
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||   ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  8646201 gtttgaggtttcttatgtatacggtagtgattttcacatttgcgtgtatg-catatatacgataccttgtatttatcttttaaaaaatttaaatagaaca 8646299  T
Q  126 ttgttctttt 135  Q
    ||||||||||    
T  8646300 ttgttctttt 8646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 30674485 - 30674330
Alignment:
Q  52 gtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatt 151  Q
    |||||||||||||||| |||||   ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||          |||| ||    
T  30674485 gtgattttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttcttt--aaaaaaaaatacgtt 30674388  T
Q  152 tttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaa 209  Q
    |||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||    
T  30674387 tttattttattacgagcctcttttcacttacagagccgagcctccagattcgtaggaa 30674330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 214
Target Start/End: Complemental strand, 34048804 - 34048630
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgta-ca-acatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    ||||||||||| ||||||||||||| ||||||||||| || | |||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||    
T  34048804 ctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattgttcttt 34048705  T
Q  135 tnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
              | ||||||||||||||||||||| || |||||||||||||| |||||||||   ||||||||||||||||    
T  34048704 -----aaaaaaaacatttttattttattacgggtctattttcacttacagagccgagcctccaaattcgtaggaacgacc 34048630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 41879182 - 41879285
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||||||||||||| ||||||| |||||||||||||| |||||  |||||||||   ||||||||||||||||||||||||| |||||||||||||||||    
T  41879182 ggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgttc 41879281  T
Q  132 tttt 135  Q
    ||||    
T  41879282 tttt 41879285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 45475818 - 45475921
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  45475818 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 45475917  T
Q  132 tttt 135  Q
    ||||    
T  45475918 tttt 45475921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 5860846 - 5860744
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    ||||||||||||||| |||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  5860846 ggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 5860747  T
Q  132 ttt 134  Q
    |||    
T  5860746 ttt 5860744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 42600783 - 42600879
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||| |||||||| |||||    
T  42600783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaatagatcattg 42600879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 5942690 - 5942777
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  || |||||| ||| ||||||||||||||||||||||    
T  5942690 ggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 23606731 - 23606628
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  23606731 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 23606632  T
Q  132 tttt 135  Q
    ||||    
T  23606631 tttt 23606628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 30883330 - 30883433
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  ||| |||||||||||||||||||||| |||||||||||||| ||    
T  30883330 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaacattgctc 30883429  T
Q  132 tttt 135  Q
    ||||    
T  30883430 tttt 30883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 23798363 - 23798261
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||| |||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  23798363 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 23798264  T
Q  132 ttt 134  Q
    |||    
T  23798263 ttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 2952323 - 2952220
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||| || |||||||||  |||||||||  ||| |||||||||||||||||||||| |||||||||||||| ||    
T  2952323 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 2952224  T
Q  132 tttt 135  Q
    ||||    
T  2952223 tttt 2952220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 10917392 - 10917495
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| |||||||||| |||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||| |||||||     
T  10917392 ggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 10917491  T
Q  132 tttt 135  Q
    ||||    
T  10917492 tttt 10917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 13534788 - 13534686
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  ||| |||||||||||||||||||||| |||||||||||||| ||    
T  13534788 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaacattgctc 13534690  T
Q  132 tttt 135  Q
    ||||    
T  13534689 tttt 13534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 13624328 - 13624226
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  ||| |||||||||||||||||||||| |||||||||||||| ||    
T  13624328 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaacattgctc 13624230  T
Q  132 tttt 135  Q
    ||||    
T  13624229 tttt 13624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 5721553 - 5721654
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||    ||||||   ||||||||||||||||||||||||| |||||||||||    
T  5721553 ggtttgaggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaac 5721652  T
Q  125 at 126  Q
    ||    
T  5721653 at 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 5942779 - 5942848
Alignment:
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||    
T  5942779 atacatttttattttattacggtcctcttttcacttacagaatcgagcttccggattcgtaggaacgacc 5942848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 25561602 - 25561496
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||| ||   |||||||||  ||||||||||||||| ||||||| |||||||||||||    
T  25561602 ggtttgaggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaac 25561505  T
Q  125 attgttctt 133  Q
    ||| |||||    
T  25561504 attattctt 25561496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 37430260 - 37430157
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| |||| | ||||||   |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  37430260 ggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 37430161  T
Q  132 tttt 135  Q
    ||||    
T  37430160 tttt 37430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 23941200 - 23941095
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||| | |||| | | |||||||||| |||||||||||   | ||||||  |||||||||||||||||||||||||||||||||| |||    
T  23941200 ggtttgaggttcctcgtatatatgattgtgattttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaac 23941101  T
Q  125 attgtt 130  Q
    ||||||    
T  23941100 attgtt 23941095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 34868223 - 34868108
Alignment:
Q  88 caccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaac 187  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||         |||| |||||||||||||| ||| |||||||||||||| || |    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacattattc-tttaaaaaaaaaatacgtttttattttattatgggtctcttttcacttacggagc 34868125  T
Q  188 cgagcctctggattcgt 204  Q
    ||||||||  |||||||    
T  34868124 cgagcctcgagattcgt 34868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 38009191 - 38009076
Alignment:
Q  95 tatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcct 194  Q
    ||||||||||||||||| |||||||||||||||||||||||         | |  ||||||||||||||||| | |||||||| ||||||||||||||||    
T  38009191 tatttatcttttaaaaattttaaatagaacattgttcttttaaaaaaaaaaaag-tttttattttattacggacttcttttcagttacagaaccgagcct 38009093  T
Q  195 ctggattcgtaggaacg 211  Q
    | |||||| ||||||||    
T  38009092 ccggattcataggaacg 38009076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 3048619 - 3048516
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||| ||||||||||||| ||||||| || | |||||||  |||||||||  |||||||||||||||||||||||||| ||||||| | |||| ||    
T  3048619 ggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagtatattgctc 3048520  T
Q  132 tttt 135  Q
    ||||    
T  3048519 tttt 3048516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 9108551 - 9108596
Alignment:
Q  89 accttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 29364468 - 29364536
Alignment:
Q  150 tttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgaccatgc 218  Q
    ||||||||||   ||||| ||||||| ||||||||| ||||| ||||  ||||||||||||||||||||    
T  29364468 tttttatttttaaacgggtctctttttacttacagagccgagtctctaaattcgtaggaacgaccatgc 29364536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 34812748 - 34812682
Alignment:
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||||||||| ||   ||||||||||||||||||  |||||| | ||||| |||||||||    
T  34812748 atacatttttattttatgacatacctcttttcacttacagagtcgagcccccggatttgtaggaacg 34812682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 38009240 - 38009203
Alignment:
Q  33 gtttctcatgtatacggtagtgattttcacctttgggt 70  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  38009240 gtttctcatgtatatggtagtaattttcacctttgggt 38009203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 38843473 - 38843420
Alignment:
Q  158 ttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||| |||||||||||||| ||| |||||||||   |||||||||||||    
T  38843473 ttattacggacctcttttcacttagagagccgagcctccaaattcgtaggaacg 38843420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 16097001 - 16097188
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  16097001 ggtttgaggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaac 16097100  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    |||||||||||         |||||| |||||||||||||||||| ||||||||||||||| |||||||||   ||||||||||||||||    
T  16097101 attgttcttttaaacaaa--atacatatttattttattacgggccacttttcacttacagagccgagcctccaaattcgtaggaacgacc 16097188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 21665809 - 21665627
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||| |||| |||||||||||||||||||||||||| ||| | ||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  21665809 ggtttgtggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaac 21665710  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    |||||||||||         ||||||||||||||||||||||| ||||||||||||||||| |||| ||||  |||||||||||||    
T  21665709 attgttcttttaaaaaa---atacatttttattttattacgggtctcttttcacttacagagccgaccctccagattcgtaggaac 21665627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 28425816 - 28425632
Alignment:
Q  28 ttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||||||| ||||| |||| ||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  28425816 ttgaggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacatt 28425717  T
Q  128 gttctttt-nnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||          |||||||||||||||||||||| |||||||||| ||||| || |||||||||| |||||||||||||    
T  28425716 gttcttttaaaaaaaaaaatacatttttattttattacggacctcttttcatttacaaaaacgagcctctgaattcgtaggaacg 28425632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 37 - 214
Target Start/End: Complemental strand, 24035642 - 24035467
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttn 136  Q
    ||||||||| |||||||||||||||||||| ||||||   ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24035642 ctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 24035543  T
Q  137 nnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
            |||| ||||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||||    
T  24035542 aaagaa--atacgtttttattttattacgggcatcttttcacttacaaaatcgagcatccggattcgtaggaatgacc 24035467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 38400791 - 38400978
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||   ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  38400791 ggtttgaggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaac 38400890  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    ||||||||| |        ||||  ||||||||||||| |||| ||||||||||||||||| |||| | |  ||||||||| ||||||||    
T  38400891 attgttcttat--aaaaaatatatgtttttattttattgcgggtctcttttcacttacagagccgaactttcggattcgtaagaacgacc 38400978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 207
Target Start/End: Complemental strand, 12134149 - 12133965
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||||||   |||||||||   |||||||||||||||||||||   ||||||||||||    
T  12134149 ggtttgaggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaac 12134050  T
Q  125 attgttcttttnnnnnnnntatac---atttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtagg 207  Q
    |||||||||||         ||||    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12134049 attgttctttttaaaaaaa-atacgttcttattattttattacggacctcttttcacttacagaaccgagcctctggattcgtagg 12133965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 217
Target Start/End: Original strand, 42029166 - 42029332
Alignment:
Q  53 tgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt--tnnnnnnnntatacat 150  Q
    |||||||||||||| |||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||            ||||||    
T  42029166 tgattttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacattgttctttaaaaaaaaaaaaatacat 42029265  T
Q  151 ttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgaccatg 217  Q
    |||||| ||||||||  |||||||||||||||| |||||||||||  ||||| ||||||||||||||    
T  42029266 ttttatattattacgaacctcttttcacttacaaaaccgagcctccagattcttaggaacgaccatg 42029332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 12337550 - 12337447
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||    
T  12337550 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctc 12337451  T
Q  132 tttt 135  Q
    ||||    
T  12337450 tttt 12337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 13800652 - 13800495
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcaccttt-gggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    ||||||||| ||| ||||||  |||||||||||||||||| |||||||   |||||||||  |||||| |||||||||||||||||||||||||||||||    
T  13800652 tttgaggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaaca 13800553  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacaga 185  Q
    ||||||||||         |||||||||||||||||||||  ||||||||||||||||||    
T  13800552 ttgttctttttaaaaaa--atacatttttattttattacgaacctcttttcacttacaga 13800495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 16227477 - 16227291
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| || |||||||  ||||||||||||| || | ||||||  |||||||||| |||||||||||||||||||||||||||||||||||||     
T  16227477 ggtttgaggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaa 16227378  T
Q  125 attgttcttt-tnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||          ||||  ||||||||||||||  || ||||||||||||||||||| ||||||| | |||||||||||||    
T  16227377 attgttctttaaaaaaaaaatatatgtttttattttatta-aggtctcttttcacttacagaactgagcctccgaattcgtaggaacg 16227291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 29939964 - 29939861
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||    
T  29939964 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaatagaacattgctc 29939865  T
Q  132 tttt 135  Q
    ||||    
T  29939864 tttt 29939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 10762667 - 10762565
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  10762667 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaatagaacattgctc 10762568  T
Q  132 ttt 134  Q
    |||    
T  10762567 ttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 7742243 - 7742055
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaa-aaaatttaaatagaa 123  Q
    ||||||||||| |||||| ||||| ||||  ||||||||||||| ||||   ||||||||  |||| ||||||||||||||||| ||||| |||||||||    
T  7742243 ggtttgaggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaa 7742144  T
Q  124 cattgttctttt--nnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    ||||||||||||          |||   |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  7742143 cattgttcttttaaaaaaataatatgtgtttttattttatcacgggcctcttttcacttacagaaccgaacctccggattcgtaggaac 7742055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 24410437 - 24410535
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgtt 130  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| ||||||||||||||||    
T  24410437 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24410535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 9046029 - 9046133
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt-aaaaaatttaaatagaacattgtt 130  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| |||||||||||| ||||||| ||||||||||||||||    
T  9046029 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacattgtt 9046128  T
Q  131 ctttt 135  Q
    |||||    
T  9046129 ctttt 9046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 3155217 - 3155320
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| | |||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  3155217 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 3155316  T
Q  132 tttt 135  Q
    ||||    
T  3155317 tttt 3155320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 4505894 - 4505997
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  4505894 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 4505993  T
Q  132 tttt 135  Q
    ||||    
T  4505994 tttt 4505997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 6965007 - 6965110
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  ||| |||||||||||||||||||||| |||||||||||||| ||    
T  6965007 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 6965106  T
Q  132 tttt 135  Q
    ||||    
T  6965107 tttt 6965110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 8907181 - 8907086
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||||||||||||||||||||| ||||| |||| |||||||||  |||||||||  | |||||||||||||||||||||||| |||||||||||||    
T  8907181 ggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatataaatagaacatt 8907086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 26716128 - 26716232
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt-aaaaaatttaaatagaacattgtt 130  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  ||||||||   |||||| |||||||||||| ||||||| |||||||||||||| |    
T  26716128 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaacattgct 26716227  T
Q  131 ctttt 135  Q
    |||||    
T  26716228 ctttt 26716232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 27506837 - 27506746
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    ||||||||||| ||||| ||||| |||||||||||||| ||||||||||  |||||| ||||||||||||||||||| |||||||| |||||    
T  27506837 ctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaatagatcattg 27506746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 34693991 - 34694078
Alignment:
Q  48 ggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||| ||||| |||| ||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34694078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 34716403 - 34716490
Alignment:
Q  48 ggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||| ||||| |||| ||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 11912866 - 11912697
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| || |||||||||||||||||||||| |||||| ||||   |||||||||  ||| |||||||||| ||||   |||||||||||||||    
T  11912866 ggtttgaggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaac 11912767  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||||| |||        ||||  |||||||||||||||||   |||||||||||| ||| |||||||||    
T  11912766 attgttc-tttaaaaaaaatatatgtttttattttattacggatatcttttcacttatagagccgagcctc 11912697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 11952643 - 11952514
Alignment:
Q  78 atatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttca 177  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||          | |  |||||||||||||||||| |||||||||    
T  11952643 atatatacgacactttgtatt-atcttttaaaaaatttaaatagaacattgttctttaaaaaaa---aaatgtttttattttattacgggtctcttttca 11952548  T
Q  178 cttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||||||||   ||||||||||||||    
T  11952547 cttacagaaccgagccttcagattcgtaggaacg 11952514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 40636164 - 40636241
Alignment:
Q  58 ttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 40636241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 7162784 - 7162887
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||| ||||||||||| |||||||||| || || |||  |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  7162784 ggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 7162883  T
Q  132 tttt 135  Q
    ||||    
T  7162884 tttt 7162887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 22727497 - 22727384
Alignment:
Q  94 gtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcc 193  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||| |||||||||||||||  ||||||||||||||||||   ||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaa--atacgtttttattttattacttgcctcttttcacttacagcgtcgagcc 22727400  T
Q  194 tctggattcgtaggaa 209  Q
    || | |||||||||||    
T  22727399 tccgaattcgtaggaa 22727384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 3953006 - 3953100
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| |||||| |||||||| | |||||||||| |||||||||  ||| |||||  |||||||||||||||||||||||||| ||||||||||||    
T  3953006 ggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatataaatagaacat 3953100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 37182665 - 37182739
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttat 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||   ||||||||| |||||||||||||||    
T  37182665 tttgaggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 37182755 - 37182824
Alignment:
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||    
T  37182755 atacgtttttattttattacgggtctcttttcacttacagagccgagcctccggattcttaggaacgacc 37182824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 12694794 - 12694855
Alignment:
Q  149 atttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||    
T  12694794 atttttattttattacgggtctcttttcacttacagagccgagcctccggattcgtaagaac 12694855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 44914932 - 44914846
Alignment:
Q  105 ttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcct 194  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||||||| | ||||||    
T  44914932 ttaaaaaatttaaatagaacattgttcttttaaaaaag---tacatttttattttattacggacctcttttcacttacagagctgagcct 44914846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 10252431 - 10252518
Alignment:
Q  50 tagtgattttcacctttgggtgtacaacatatat---acaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    ||||| |||||||||||||||||  |  ||||||   || ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  10252431 tagtggttttcacctttgggtgtgtagtatatatacgacgacaccttgtatttatcttttaaaaaatttaaattgaacatttttcttt 10252518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 22727611 - 22727530
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt 106  Q
    ||||||||| || ||||||||| ||||||||||||||| |||||||||||  |||||||||  ||| | |||||||||||||    
T  22727611 ggtttgagggttatcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 480151 - 480222
Alignment:
Q  40 atgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaa 111  Q
    ||||||| | ||||||||||||||||||| |||||| ||| ||||||||||||||||   ||||||||||||    
T  480151 atgtatatgatagtgattttcacctttggatgtacatcatctatacaacaccttgtaacgatcttttaaaaa 480222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 5952791 - 5952716
Alignment:
Q  58 ttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||| |||||||||  |||||||||  |||||||||||||||||||||||||  |||||| ||||||| ||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa--taaatataacattgctctttt 5952716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 8327674 - 8327714
Alignment:
Q  88 caccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattg 8327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 367 - 193
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  367 ggtttgaggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 268  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggatt 201  Q
    |||||||||||         ||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||    
T  267 attgttcttttaataaaa--atacatttttattttattatgggcctctattcacttgcagagccgagcctctggatt 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 2611369 - 2611182
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||| ||||||||||| || |||||||||||| ||| ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2611369 gtttgaggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaca 2611270  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    ||||||||||         |||| |||||||||||||||  |||||||||||||| |||||||||||||| |||||| |||||||||||    
T  2611269 ttgttcttttaaaaaaaa-atacttttttattttattacaagcctcttttcacttgcagaaccgagcctccggattcataggaacgacc 2611182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 6765789 - 6765609
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||| | |||||||||||||||||||||||||| |||||  | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  6765789 ggtttgaggttactcttatatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 6765690  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    ||||||||||          | || |||||||||||||||| |||||||||||  |||||||| ||||||| ||||||||||||||    
T  6765689 attgttcttt-----aaaaaaaacttttttattttattacgagcctcttttcatctacagaactgagcctccggattcgtaggaac 6765609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 12981320 - 12981502
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||| ||||||  | ||||||    |||||||||||||||||||||||| |||||||||||    
T  12981320 ggtttgaggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaac 12981419  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||| |||||||         | ||||||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||    
T  12981420 attcttcttttataaa----aaacatttttattttattacgagcctcttttcacctacagaaccgaacctccggattcgtaggaacg 12981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 23020589 - 23020409
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||||||||||| |||||  ||| |    
T  23020589 tttgaagttcctcatgtatacggtagtgattttcacctttgagtgtgtg-catatatacaacaccttatatttatcttttaaaaaatctaaatgaaacgt 23020491  T
Q  127 tgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||         |||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||    
T  23020490 tgttcttttaaaaaaa--atacatttttattttattacggacctcttttcacttacagaaccg-gcctccagattcgtaggaacg 23020409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 7398445 - 7398632
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||  |||||||||   |||||||||||||||||| ||||||||||||||||||    
T  7398445 ggtttgaggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaac 7398544  T
Q  125 attgttcttttnnnnnnnntatacattttta-ttttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||         |||  |||||| |||||||||||| |||||||||||||||||  |||||||   | ||||||||||||    
T  7398545 attgttcttttataaaaaaaatatgtttttatttttattacgggtctcttttcacttacagagtcgagcctacagcttcgtaggaacg 7398632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 27237531 - 27237421
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||| ||||||||||||||||| | |  |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27237531 ggtttgaggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 27237432  T
Q  125 attgttctttt 135  Q
    |||||||||||    
T  27237431 attgttctttt 27237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 38971267 - 38971436
Alignment:
Q  45 tacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnnt 144  Q
    |||||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||||| || |||| ||||||             
T  38971267 tacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatctttt-aaaaatttaaataaaatattgatcttttaaaaaaa-- 38971363  T
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgaccatg 217  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||| |||| ||||||||| |||| |||||    
T  38971364 atacatttttattttattacgggtctcttttcacttacaaagccgagtctctagattcgtagaaacggccatg 38971436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 12419603 - 12419419
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||||| |  |||||||||||| |||||| ||||  ||| |||||    || |||||||||||||||||||||||||||||||||    
T  12419603 ggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 12419504  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||         |||| || ||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  12419503 attgttcttttaaaaaaa--atacgttgttattttattacgggcctcttttcacttacaaagccgagcctccggattcataggaacg 12419419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 23744808 - 23744974
Alignment:
Q  43 tatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnn 142  Q
    ||||||||||||||||| | |||| |||||||  ||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||           
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttttaaaaaa 23744907  T
Q  143 ntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
      ||||||||||||||| ||||||||||||||||||||| ||| | |||||||   |||||||||||||    
T  23744908 --atacatttttatttttttacgggcctcttttcacttatagagctgagcctccaaattcgtaggaacg 23744974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 36891572 - 36891728
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||   ||||||||||||| ||||||| ||| |||||||||| ||||||||||    
T  36891572 ggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaac 36891671  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcactta 181  Q
    ||| |||||||         |||| |||||||||||| |||| | ||||||||||||    
T  36891672 attattcttttaaaaaaaaaatacgtttttattttatcacggacttcttttcactta 36891728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 36903020 - 36902924
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 133  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  36903020 ctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 23859067 - 23859251
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||| | ||||||||||||||||| ||||||| |||||||||||   |||||||||   || |||||||||||||||||||||||||||||||||    
T  23859067 ggtttgaggatcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaac 23859166  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||| |||| ||         |||| ||||||||||||||| || |||||||||||||||||  ||||||||   |||||||||||||    
T  23859167 attattctcttaaacaaa--atacgtttttattttattacaggtctcttttcacttacagagtcgagcctccaaattcgtaggaacg 23859251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 9021896 - 9021799
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||||||||||||||||||||| | ||||||||||    
T  9021896 ctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 18776867 - 18776764
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||||||||||||||||||||| |||||||| | |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  18776867 ggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 18776768  T
Q  132 tttt 135  Q
    ||||    
T  18776767 tttt 18776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 29077221 - 29077324
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| | |||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||    
T  29077221 ggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctc 29077320  T
Q  132 tttt 135  Q
    ||||    
T  29077321 tttt 29077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 48983945 - 48983842
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||     
T  48983945 ggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagatcattgttt 48983846  T
Q  132 tttt 135  Q
    ||||    
T  48983845 tttt 48983842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 8171640 - 8171537
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||| || |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  8171640 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 8171541  T
Q  132 tttt 135  Q
    ||||    
T  8171540 tttt 8171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 20091382 - 20091279
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||| |||||||     
T  20091382 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 20091283  T
Q  132 tttt 135  Q
    ||||    
T  20091282 tttt 20091279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 10329511 - 10329415
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||||||||||||||||| |||||||||||||||| | |  |||||||||  |||||| ||||||||||||||||||| ||||||||||||||    
T  10329511 ggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 10329415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 38414977 - 38414874
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||  ||||||||| ||| ||    
T  38414977 ggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctc 38414878  T
Q  132 tttt 135  Q
    ||||    
T  38414877 tttt 38414874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 12596388 - 12596294
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| |||||| |||||||||| |||||||||| ||||||||| ||||||||||  |||||||||||||||||| ||||||| ||||||||||||    
T  12596388 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaacat 12596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 18201131 - 18201313
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||||| || ||||  |||||||||| || ||||||| |||||||||   || ||||||||||| |||||||||||||||||||| |    
T  18201131 ggtttgaggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaatagatc 18201230  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||| |||         ||| |||||||||||||||||| | || |||||||| |||| ||||||||| |||||||| ||||||    
T  18201231 attgttcgtttaaaaaa---atatatttttattttattacggacatc-tttcacttgcagagccgagcctccggattcgtgggaacg 18201313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 20153207 - 20153297
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    ||||||||||||| ||||||||||| |||||||| ||   |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  20153207 ctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 24525786 - 24525688
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgtt 130  Q
    |||| ||||||||||||||||| |||||||| |||||||||||  |||||| ||  |||||| ||||||||||||||||||| ||||||||||||||||    
T  24525786 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24525688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 10955485 - 10955588
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| || ||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||| | ||    
T  10955485 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacatcgctc 10955584  T
Q  132 tttt 135  Q
    ||||    
T  10955585 tttt 10955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 21763672 - 21763513
Alignment:
Q  48 ggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntata 147  Q
    ||||||||||||||| ||| ||||||   ||||||||| | || |||||||||||||||||||||||||||||||||| ||||||||          |||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttcttt----aaaaaaata 21763577  T
Q  148 catttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    | |||||||||||||||||  ||||||| ||||| ||||| |||||||  |||| |||||||||    
T  21763576 cgtttttattttattacggatctctttttacttatagaacagagcctccagatttgtaggaacg 21763513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 195
Target Start/End: Complemental strand, 9014868 - 9014709
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||       |||||||| |||| |||||||||||||||| |||||||||||| || ||    
T  9014868 tttgaggttactcatgtatacggtagtgattttcacctttgggt-------atatatacgacacattgtatttatcttttacaaaatttaaataaaagat 9014776  T
Q  127 tgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    || || ||          ||||| |||||||||||||||||| ||||||| |||| ||| |||||||||    
T  9014775 tgatcatt--aaaaaaaaatacagttttattttattacgggcttcttttcccttatagagccgagcctc 9014709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 9014233 - 9014119
Alignment:
Q  78 atatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttca 177  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||          ||||  |||||||||||||||||||||||||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacattgttcttt---aaaaaaaatacggttttattttattacgggcctcttttca 9014137  T
Q  178 cttacagaaccgagcctc 195  Q
    |||| |||  ||||||||    
T  9014136 cttatagagtcgagcctc 9014119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 23551172 - 23551075
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaa-aaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||||| ||||| |||||||| |||||    
T  23551172 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaatataaatagatcattg 23551075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 26254017 - 26254097
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||| ||||||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  26254017 attttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 26254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 19692095 - 19692198
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||  ||| |||||||||||| |||||||  ||||||||   |||||| ||||||||||||||||||| |||||||||||||| ||    
T  19692095 ggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaacattgctc 19692194  T
Q  132 tttt 135  Q
    ||||    
T  19692195 tttt 19692198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 47985071 - 47984974
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaa-aaaatttaaatagaacattg 128  Q
    |||| |||||||||||||| || ||||||||||||||||||||  |||||||||  |||||| ||||| |||||||| ||||| ||||||||||||||    
T  47985071 ggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaatagaacattg 47984974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 8239688 - 8239783
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||| ||||| ||||||||| | |||||||| ||||||||||| ||||||||||  ||| || ||||||| ||||||||||| |||||||||||||    
T  8239688 ggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaacatt 8239783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 33162417 - 33162338
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    |||||||||||| |||||||  |||||||||  |||||||||||||||||||||||||| |||||||| ||||| |||||    
T  33162417 attttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 28749716 - 28749813
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| |||||||| | || ||||||  |||||||||  ||||||||||||||||||| |||||| ||||||||| |||| ||||||    
T  28749716 ctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctctttt 28749813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 17800317 - 17800257
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtat 97  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||    
T  17800317 ctcatgcatacggtagtgattttcacttttgggtgtacaacatatatacgacaacttgtat 17800257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 26917715 - 26917652
Alignment:
Q  151 ttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    |||||||||||||||| ||||||||||||||||||  | ||||||| |||||||| ||||||||    
T  26917715 ttttattttattacggacctcttttcacttacagagtcaagcctctagattcgtaagaacgacc 26917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 25010434 - 25010476
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtac 74  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  25010434 ggttcctcatgtatacggtagtcattttcacctttgggtgtac 25010476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 206
Target Start/End: Original strand, 52468285 - 52468463
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  52468285 ggtttgaggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaac 52468384  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtag 206  Q
    |||||||||||         |||| ||||||||||||||| | ||||||||||| |||||| ||||||||| | ||||||||    
T  52468385 attgttcttttaaaaaa---atacgtttttattttattacagacctcttttcacctacagagccgagcctccgaattcgtag 52468463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 36118566 - 36118383
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||| |||||| |||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36118566 ggttagaggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 36118467  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||| |||         |||| |||||||||||||||| ||||||||||||||||| | |||||| || | |||||||||||||    
T  36118466 attgttcatttaaaaaa---atacgtttttattttattacgagcctcttttcacttacaaagccgagcttccgaattcgtaggaacg 36118383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 39329500 - 39329317
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||| ||| ||| |||||||||||  |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39329500 ggtttgatgttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaac 39329401  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    |||||||||||        |||   ||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||    
T  39329400 attgttcttttaaaaaaaatat--gtttttattttattacggacctcttttcacttacagaaccgagcctccaaattcgtaggaac 39329317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 27112029 - 27112212
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||||   ||||||||   |||||||||||||||||||||||||||||||| ||||    
T  27112029 ggtttgaggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaac 27112128  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||| |||         ||||| | ||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||    
T  27112129 attgttcgtttaaaaaa---atacaatcttattttattacgggtctcttttcacttacagaaccgagcctccagatttgtaggaacg 27112212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 24396934 - 24397121
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||  ||||||||||  |||||| |||||||||||||||||||||||||| || |    
T  24396934 gtttgaggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaata 24397033  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    ||||||||||         |||| |||||||||||||||  | ||||||||||||||||| | ||||||||||||| ||| | ||||||    
T  24397034 ttgttcttttaaaaaaaa-atacgtttttattttattacatgtctcttttcacttacagagctgagcctctggatttgtaagtacgacc 24397121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 10042106 - 10041923
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    ||||||||| ||| |||||||||||||||||||||| ||| ||||||  ||||| ||||  |||||||||||||| |||| |||||||||||||||||||    
T  10042106 tttgaggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacat 10042007  T
Q  127 tgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||         ||||  |||||||||| ||||| |||||||||||||||||||| || ||||  ||||||||||||||    
T  10042006 tgttcttttaaaaaaaa-atacgcttttattttactacggacctcttttcacttacagaactgaacctcccgattcgtaggaacg 10041923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 32128590 - 32128693
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    ||||||| |||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||    
T  32128590 ggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctc 32128689  T
Q  132 tttt 135  Q
    ||||    
T  32128690 tttt 32128693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 47128993 - 47129154
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  47128993 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttc 47129092  T
Q  132 ttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||         ||||||||| ||||||| || |||||||||||| || |||| |||||||||    
T  47129093 ttttaaaaaaa--atacattttgattttatcactggcctcttttcatttccagagccgagcctc 47129154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 54780783 - 54780886
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  54780783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 54780882  T
Q  132 tttt 135  Q
    ||||    
T  54780883 tttt 54780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 2790842 - 2790739
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||   ||||| ||||||||||||||||||| |||||||||||||||||    
T  2790842 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttc 2790743  T
Q  132 tttt 135  Q
    ||||    
T  2790742 tttt 2790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 10978906 - 10979009
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||| | |||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||    
T  10978906 ggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctc 10979005  T
Q  132 tttt 135  Q
    ||||    
T  10979006 tttt 10979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 43455632 - 43455529
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  43455632 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 43455533  T
Q  132 tttt 135  Q
    ||||    
T  43455532 tttt 43455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 30507162 - 30507040
Alignment:
Q  93 tgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnnta-tacatttttattttattacgggcctcttttcacttacagaaccgag 191  Q
    |||||||||||||||||||||||||||||||||||||||||||         | |||||||||||||||||| ||| ||||||||||||||| || ||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaaaaatacatttttattttattatgggtctcttttcacttacaaaatcgag 30507063  T
Q  192 cctctggattcgtaggaacgacc 214  Q
    |||| ||||||||||||||||||    
T  30507062 cctccggattcgtaggaacgacc 30507040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 36178684 - 36178778
Alignment:
Q  38 tcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttct 132  Q
    ||||||||| ||||||||||||||| ||||||||||   ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattgttct 36178778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 38209692 - 38209590
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  38209692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 38209593  T
Q  132 ttt 134  Q
    |||    
T  38209592 ttt 38209590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 39655334 - 39655174
Alignment:
Q  53 tgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacattt 152  Q
    ||||||||||||||||||||||  ||||||| |   || ||||||||||||||||||||||||||||||||||||||||||||         | || |||    
T  39655334 tgattttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttttaaaaataga-acgttt 39655236  T
Q  153 ttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||  |||| ||||||||||||    
T  39655235 ttattttattacgagcctcttttcacctacagagtcgagcctccagatttgtaggaacgacc 39655174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 40217231 - 40217411
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||| | || ||||||||| |||||| ||||   ||||||||| ||||||| |||||||||||||||||||||||||||       
T  40217231 ggtttgaggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag--t 40217328  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaa 209  Q
    | ||||||||          | || |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  40217329 aatgttcttt--aaaaaaaaaaacgtttttattttattacgagcctcttttcacttacaaaaccgagcctctgaattcgtaggaa 40217411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 51692025 - 51691844
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttg--ggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaataga 122  Q
    |||||||||||  || |||||| ||||||||||||||| |||   |||||||  |||||||||  |||||||||||||||||||||||||||||||||||    
T  51692025 ggtttgaggttcatcgtgtatatggtagtgattttcactttttttggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaataga 51691926  T
Q  123 acattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||| ||||||         ||||||     |||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||    
T  51691925 acattgctcttttaaaaaaa--atacat-----ttttattacgagcctcttttcacttgcagagccgagcctccggattcgtaggaacg 51691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 16845027 - 16845131
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt-aaaaaatttaaatagaacattgtt 130  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||| |||||||||||| ||||||| |||||||||||||| |    
T  16845027 ggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaatataaatagaacattgct 16845126  T
Q  131 ctttt 135  Q
    |||||    
T  16845127 ctttt 16845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 34027585 - 34027681
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  34027585 ggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattg 34027681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 35779427 - 35779325
Alignment:
Q  31 aggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgtt 130  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| | |||||||||||| |    
T  35779427 aggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat-aatagaacattgct 35779329  T
Q  131 cttt 134  Q
    ||||    
T  35779328 cttt 35779325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 37777324 - 37777229
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||    
T  37777324 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 37777229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 48209246 - 48209349
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||||||||||||||||||||| || ||||| | |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  48209246 ggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 48209345  T
Q  132 tttt 135  Q
    ||||    
T  48209346 tttt 48209349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 206
Target Start/End: Complemental strand, 36362978 - 36362798
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| || ||||||| ||||||||||| ||| ||||||||||   |||||||||  ||| ||||||||||||||||||||||||||| ||| |    
T  36362978 ggtttgaggttcct-atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagc 36362880  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtag 206  Q
    |||||||||||        |||   |||||||||||||| ||| |||||||||||||||||  |  |||||| |||||||||    
T  36362879 attgttcttttaaaaaatatatttttttttattttattatgggtctcttttcacttacagagtcaggcctctagattcgtag 36362798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 2135428 - 2135324
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||| ||||| |||||| ||||||| || |||||||| ||||   ||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  2135428 gtttgaggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaata 2135329  T
Q  126 ttgtt 130  Q
    |||||    
T  2135328 ttgtt 2135324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 37745018 - 37744820
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaa-aaaatttaaatagaa 123  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||   ||||||| | ||||||| |||||||||||||| |||||||||||||||    
T  37745018 ggtttgaggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaa 37744919  T
Q  124 c--attgttctttt--nnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgaccatgc 218  Q
    |  |||||| ||||           |||| ||||||||||| |||||||||||||||| ||| |||  |||||||  | ||||||||||||| ||||||    
T  37744918 catattgttgttttaaaaaaaaaaaatacgtttttattttaatacgggcctcttttcaattatagagtcgagccttcgaattcgtaggaacggccatgc 37744820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 32915391 - 32915494
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||| | ||||| |||| ||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  32915391 ggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 32915490  T
Q  132 tttt 135  Q
    ||||    
T  32915491 tttt 32915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 34768675 - 34768572
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||| | |||||||||| |||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  34768675 ggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 34768576  T
Q  132 tttt 135  Q
    ||||    
T  34768575 tttt 34768572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 4167997 - 4167911
Alignment:
Q  27 tttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaat 113  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||  ||||||||||||||||||||||||||    
T  4167997 tttgaggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaat 4167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 5128945 - 5128852
Alignment:
Q  30 gaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaa 123  Q
    |||||| ||||||||||||||||| |||||||||| |||||| ||  |||||||||  |||||||||||||||||||||||||| |||||||||    
T  5128945 gaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 24614018 - 24614137
Alignment:
Q  91 cttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccga 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||||||| | ||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacattgttctttaaaaaaaaaaataca-ttttattttattacgggcctcttttcacttacagagctga 24614116  T
Q  191 gcctctggattcgtaggaacg 211  Q
     ||||  |||||||| |||||    
T  24614117 acctccagattcgtaagaacg 24614137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 37514671 - 37514759
Alignment:
Q  38 tcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||||||||||||||| |||||||||| || ||||||  |||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  37514671 tcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 37514759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 54083343 - 54083240
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| | ||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||| |||||||     
T  54083343 ggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 54083244  T
Q  132 tttt 135  Q
    ||||    
T  54083243 tttt 54083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 1105538 - 1105632
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| |||||||||| |||||| |||||||||| | |||||||  ||||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  1105538 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacat 1105632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 13460221 - 13460306
Alignment:
Q  40 atgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||||||| |||||||| | ||||| |||  ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13460221 atgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 35465118 - 35465215
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| |||||||| ||| |||||||  |||||||||  |||||| |||||||||| |||||||| |||||| ||||||||||||||    
T  35465118 ctcatgtatacggtagttattttcacttttaggtgtaccgcatatatacg-caccttttatttatcttgtaaaaaatataaatataacattgttctttt 35465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 45656174 - 45656279
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||||||  ||||||||||| | ||||||||||| ||||| | ||   ||||||||  |||||||| ||||||||||||||||||||||||| |||    
T  45656174 ggtttgaggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaac 45656273  T
Q  125 attgtt 130  Q
    ||||||    
T  45656274 attgtt 45656279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 19498510 - 19498611
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||| ||||| |||||||||||||| |||||  ||||||  |  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  19498510 ggttcctcatgtatacagtagtcattttcacctttggctgtaccgcatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgctc 19498607  T
Q  132 tttt 135  Q
    ||||    
T  19498608 tttt 19498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 10428273 - 10428202
Alignment:
Q  57 tttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  10428273 tttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 10428202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 15735094 - 15735196
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||| ||| ||||||||||||||| |||||||||  ||| |||||     |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  15735094 ggtttgaagttcctcatgtatacggtaatgattttcattttttggtgt-----atatatacgacgtcttgtatttatcttttaaaaaatttaaatagaac 15735188  T
Q  125 attgttct 132  Q
    | ||||||    
T  15735189 actgttct 15735196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 40089522 - 40089601
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaa 111  Q
    |||| ||||||||||||||||| |||||||||||||| |||||  |||||||||  |||||| |||||||||||||||||    
T  40089522 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaa 40089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 4167912 - 4167846
Alignment:
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||| |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| |||||    
T  4167912 atacgtttttattttattacgggcctcttttcacttacaaaatcgagcctccggattcgtacgaacg 4167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 11906892 - 11906826
Alignment:
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||||||| | |||||||||||||    
T  11906892 atacatttttattttattacgggcctcttttcacttatatagccgagcctccgaattcgtaggaacg 11906826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 17679432 - 17679509
Alignment:
Q  58 ttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctctttt 17679509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 5893092 - 5893179
Alignment:
Q  107 aaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    |||||| ||||||||||||||||||||||         |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  5893092 aaaaaagttaaatagaacattgttcttttaaaaaaaa-atacatttttattttattacggacctcttttcacttacagagccgagcctc 5893179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 16922407 - 16922327
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||||  |||  ||||||||| |||| || ||||||||||||||||||| |||||||||||||| ||||||    
T  16922407 attttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctctttt 16922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 16882484 - 16882393
Alignment:
Q  44 atacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||| |||||||||||| |||||||   ||||| ||  |||||| ||||||||||||||||| | |||||||||||||||| ||||    
T  16882484 atacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtataaatagaacattgttttttt 16882393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 9578708 - 9578662
Alignment:
Q  89 accttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9578708 accttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 23508564 - 23508515
Alignment:
Q  80 atatacaacaccttgtatttatcttttaaaaaatt-taaatagaacattg 128  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattg 23508515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 51964737 - 51964820
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt---aaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||| ||||||||   |||||||||  |||||||||||||||||||   ||||||| |||||||||||||| ||||||    
T  51964737 attttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctctttt 51964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 29425282 - 29425187
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaata 120  Q
    ||||||||||| ||| ||| || |||||  ||||||||||||   |||||  |||||||||  |||||| ||||||| ||||||||||||||||||    
T  29425282 ggtttgaggttactcgtgtgtatggtagcaattttcacctttaaatgtactgcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 55255319 - 55255366
Alignment:
Q  88 caccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  55255319 caccttgtatttatcttttaaaaaatataaatggaacattgctctttt 55255366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 24969443 - 24969485
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtac 74  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  24969443 ggttcctcatgtatacggtagtcattttcacctttgggtgtac 24969485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 38352356 - 38352314
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtac 74  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  38352356 ggttcctcatgtacacggtagtcattttcacctttgggtgtac 38352314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 11906960 - 11906904
Alignment:
Q  64 tttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaata 120  Q
    ||||| ||||| ||||||||||   |||||||||||||||||  |||||||||||||    
T  11906960 tttggatgtaccacatatatacggtaccttgtatttatctttataaaaatttaaata 11906904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 24969489 - 24969529
Alignment:
Q  88 caccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  24969489 caccttatatttatcttttaaaaaatataaatagatcattg 24969529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 230968 - 230786
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||  ||||||||||||| |||||||||||||||    
T  230968 ggtttgaagttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaac 230869  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||        ||||||||||  ||||||||||||||||||||| |||||||| |||||| || |||||||||||||||    
T  230868 attgttctttt--aaaaaatatacatttt--ttttattacgggcctcttttcccttacagatccgagcttccggattcgtaggaacg 230786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 206597 - 206417
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  206597 gtttgaggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaaca 206498  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaac 210  Q
    || ||||||          ||||||||||||||||||||   |||||||||||||||||| ||  ||||| ||||||||||||||    
T  206497 ttcttcttt--aaaaaaaaatacatttttattttattacaaacctcttttcacttacagagcc--gcctcaggattcgtaggaac 206417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 182436 - 182493
Alignment:
Q  154 tattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||||||||||||| |||||||| ||| |||||||||||  |||||||||||||    
T  182436 tattttattacgggcctcatttcactttcagcaccgagcctctaaattcgtaggaacg 182493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 1348 - 1534
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||| | |||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  1348 ggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaac 1447  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgac 213  Q
    ||| |||||||         |||| ||||||||||||||||| | |||||||||||||||| | ||||||   ||||||||||||||||    
T  1448 attattcttttaaaaaaa--atacgtttttattttattacggacttcttttcacttacagagcagagccttcagattcgtaggaacgac 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 2477693 - 2477510
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||||   ||||||||   |||||||||||||||||||||||||||||||| ||||    
T  2477693 ggtttgaggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaac 2477594  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||| |||         ||||| | ||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||    
T  2477593 attgttcgtttaaaaaa---atacaatcttattttattacgggtctcttttcacttacagaaccgagcctccagatttgtaggaacg 2477510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 20611788 - 20611972
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||     |||||||| |||||||||||||||| |||||||||||||| |||||||    
T  20611788 gtttgaggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaaca 20611887  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgacc 214  Q
    ||  ||||           | || |||||||||| ||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  20611888 tttatctt----gaaaaaaaaacgtttttatttttttatgggcctcttttcacttacagagccgagcctccgaattcgtaggaacgacc 20611972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 21183784 - 21183686
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaa 123  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||   || ||||||||||||||||||||||||||||||||    
T  21183784 ggtttgaggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 13727501 - 13727398
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  13727501 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 13727402  T
Q  132 tttt 135  Q
    ||||    
T  13727401 tttt 13727398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 20711822 - 20711719
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  20711822 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 20711723  T
Q  132 tttt 135  Q
    ||||    
T  20711722 tttt 20711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 21479498 - 21479601
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  21479498 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 21479597  T
Q  132 tttt 135  Q
    ||||    
T  21479598 tttt 21479601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 27788790 - 27788687
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| ||||||||| |||| ||    
T  27788790 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaaaattgctc 27788691  T
Q  132 tttt 135  Q
    ||||    
T  27788690 tttt 27788687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 33774121 - 33774216
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||| ||||||||||||||||| |||||||| |||||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  33774121 ggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 33774216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 6159435 - 6159541
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| || || |||||||||||||||| ||||||||  |||||  ||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  6159435 ggtttgaggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaac 6159534  T
Q  125 attgttc 131  Q
    |||||||    
T  6159535 attgttc 6159541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 21280554 - 21280652
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| ||||| |||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  21280554 ctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 21280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 24711101 - 24711007
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| ||||||||||||||||| |||||||||| || |||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  24711101 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 24711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 1155946 - 1155849
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    ||||||||||||||||| |||||||||| ||| |||||  ||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1155946 ctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 28075787 - 28075883
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| |||||||||||||||||||   |||||||||  |||||| ||||||||||||||||||| ||||||||||||||    
T  28075787 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 28075883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 19737794 - 19737691
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| | |||||||  |||||||||  |||||||||||||||||| ||||||| |||||||||||||| ||    
T  19737794 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaatagaacattgctc 19737695  T
Q  132 tttt 135  Q
    ||||    
T  19737694 tttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 17353964 - 17354054
Alignment:
Q  38 tcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    ||||||||||| |||| |||||||| |||||||||||  ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  17353964 tcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattg 17354054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 34397859 - 34397964
Alignment:
Q  30 gaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgt 129  Q
    |||||| ||||||| |||| |||| ||||| |||||| |||||||  |||||||||  |||||||||||||||||||||||||| ||||||||||||||     
T  34397859 gaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaacattgc 34397958  T
Q  130 tctttt 135  Q
    ||||||    
T  34397959 tctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 30121783 - 30121868
Alignment:
Q  49 gtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    |||||||||||||||||||| ||||   ||||||||  ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 30832626 - 30832532
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| |||||| |||||||||| ||||||| || ||||||||| ||||||||||  || ||||||||||| ||||||||||| ||||||||||||    
T  30832626 ggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaacat 30832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 235328 - 235230
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatata--caacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||||||||||||||||| ||||||| ||||||||||||   |||||||  |  |||||| ||||||||||||||||||| |||||||| |||||    
T  235328 ggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 235230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 4036945 - 4037031
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaa 111  Q
    ||||||| ||| ||||| |||||||||||||| || |||||||||||||| | ||||||||  |||||||||||||||| |||||||    
T  4036945 ggtttgaagttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 27314258 - 27314177
Alignment:
Q  55 attttcacctttgggtgtacaacatatatacaacaccttgtatttatc-ttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||| || ||||||  |||||||||  ||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  27314258 attttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctttt 27314177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 27994870 - 27994936
Alignment:
Q  145 atacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||| |||||||||||||||| || | ||||| |||||||| |||||| || |||||||||||||||    
T  27994870 atacgtttttattttattacgagcttattttcgcttacagagccgagcttccggattcgtaggaacg 27994936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 27994778 - 27994815
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtac 74  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  27994778 ctcatgtatacggtagtgattttcacctttgagtgtac 27994815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 27131243 - 27131121
Alignment:
Q  93 tgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnnta-tacatttttattttattacgggcctcttttcacttacagaaccgag 191  Q
    ||||||||||||||||||||||| || |||| ||||||||||          | ||| ||||||||||||||| |  ||||||||| ||| |||   |||    
T  27131243 tgtatttatcttttaaaaaatttgaaaagaatattgttctttaaaaagaaaaattacgtttttattttattacagatctcttttcatttatagagttgag 27131144  T
Q  192 cctctggattcgtaggaacgacc 214  Q
    ||||||||||||| |||||||||    
T  27131143 cctctggattcgttggaacgacc 27131121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 25855419 - 25855586
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||||||  || ||||||||||||||||||||| ||||||||| || |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  25855419 ggtttgaggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgta-ttatcttttaaaaaatttaaatagaac 25855517  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    ||||||||||          |||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  25855518 attgttcttt--aaaaaaacatacatttttattttattacgggccttttttcatttacataaccgagcctc 25855586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 25 - 178
Target Start/End: Original strand, 8420323 - 8420476
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||| | ||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  8420323 ggtttgaggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaac 8420422  T
Q  125 attgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcac 178  Q
    ||| |||||||         ||||||||||||||||||| ||| ||||||||||    
T  8420423 attattcttttaaaaaagaaatacatttttattttattatgggtctcttttcac 8420476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 49393097 - 49393269
Alignment:
Q  35 ttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 134  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  49393097 ttctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T
Q  135 tnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
              ||||||||||||||||||||| | || |||||||||||| | ||||||||| |||||||||||||||    
T  49393196 --aaaaaaaaatacatttttattttattacgagtcttttttcacttaca-agccgagcctccggattcgtaggaacg 49393269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 54574936 - 54574741
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||| |||||||||||| || |||||||||||  |||||||||   ||||||||||||| |||| |||||||||||||||||    
T  54574936 ggtttgaggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaac 54574837  T
Q  125 attgttctttt--nnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgaccatgc 218  Q
    |||||||||||           |||||| |||||||||||||||| ||| |||||||| ||| ||||||||||  |||||||||||||| ||||||    
T  54574836 attgttcttttaaaaaaaaaaaatacatctttattttattacgggtctcatttcacttccagcaccgagcctccagattcgtaggaacggccatgc 54574741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 32319263 - 32319098
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    |||||||||| ||| | |||| | |||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32319263 gtttgaggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaaca 32319164  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    || ||||||           ||||||||||||||||||| | ||| |||||||||||||||| |||||||    
T  32319163 ttattctttaaaaact----tacatttttattttattacagacctattttcacttacagaactgagcctc 32319098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 789933 - 790042
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||||||     
T  789933 ggtttgaggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaag 790032  T
Q  125 attgttcttt 134  Q
    ||||||||||    
T  790033 attgttcttt 790042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 8073440 - 8073345
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||| ||||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  8073440 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 8073345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 21582775 - 21582878
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||| ||||||||||    
T  21582775 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaacattgttc 21582874  T
Q  132 tttt 135  Q
    ||||    
T  21582875 tttt 21582878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 53506986 - 53506883
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||||||   ||||| ||||||||||||||||||| ||||||||||||||||     
T  53506986 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttt 53506887  T
Q  132 tttt 135  Q
    ||||    
T  53506886 tttt 53506883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 54619305 - 54619202
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  54619305 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 54619206  T
Q  132 tttt 135  Q
    ||||    
T  54619205 tttt 54619202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 37168376 - 37168474
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||  |||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  37168376 ctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttt 37168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 26279537 - 26279649
Alignment:
Q  25 ggtttgaggtttctcatgtatacggt--agtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaataga 122  Q
    ||||||||||| ||||||||||  ||  ||||||||||| |||||||||||   ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26279537 ggtttgaggttcctcatgtataatgtgtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaataga 26279636  T
Q  123 acattgttctttt 135  Q
    |||||||||||||    
T  26279637 acattgttctttt 26279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 3953998 - 3953895
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||  | |||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  3953998 ggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttc 3953899  T
Q  132 tttt 135  Q
    ||||    
T  3953898 tttt 3953895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 34290738 - 34290635
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| ||||||||||||||||     
T  34290738 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttt 34290639  T
Q  132 tttt 135  Q
    ||||    
T  34290638 tttt 34290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 27078671 - 27078575
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||||||||||||||||| |||||||||| ||||| |||  |||||||||  ||| |||||||||||||||||||||| ||||||||||||||    
T  27078671 ggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattg 27078575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 27084468 - 27084372
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||||||||||||||||| |||||||||| ||||| |||  |||||||||  ||| |||||||||||||||||||||| ||||||||||||||    
T  27084468 ggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattg 27084372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 28689469 - 28689317
Alignment:
Q  26 gtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaaca 125  Q
    ||||||| |||||||||||||||| |||||||||||||||||| | ||   |||||||||  |||||||||||||||||||  |||||||||||||||||    
T  28689469 gtttgagatttctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaaca 28689370  T
Q  126 ttgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcactt 180  Q
    || || ||||        |||   |||||||||||||||| ||||||||||||||    
T  28689369 ttctttttttaaaaaaaatat--ctttttattttattacgagcctcttttcactt 28689317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 44708481 - 44708576
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||| ||||||||||||||||| ||||||||||||||||||||   ||||||||  |||||| ||||||||||||||||||| |||||||||||||    
T  44708481 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 44708576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 54407252 - 54407157
Alignment:
Q  40 atgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||||||||| |||||||||||||| |||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  54407252 atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttt 54407157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 23641375 - 23641242
Alignment:
Q  77 catatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttc 176  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||  ||||||||||         |||| |||||||||||| ||||| ||||||||    
T  23641375 catatatacgacacattgtatttatcttttaaaaaatataaatagaatgttgttcttttaaaaaaaa-atacgtttttattttatcacgggtctcttttc 23641277  T
Q  177 acttacagaaccgagcctctggattcgtaggaacg 211  Q
    || ||||||||||||||||  ||||||||||||||    
T  23641276 acctacagaaccgagcctccagattcgtaggaacg 23641242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 38681190 - 38681092
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||||||||||| |||||||||| ||| |||||  |||| ||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  38681190 ctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 38681092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 47467688 - 47467782
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||| ||||||||||||||||| |||||||||| ||||||||   |||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  47467688 ggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 47467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 50939335 - 50939239
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||| ||||||||||||||||| ||||| |||||||||||||| | ||||||||  |||||| ||||||||||||||||||| |||||||| |||||    
T  50939335 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaatagatcattg 50939239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 9878781 - 9878686
Alignment:
Q  40 atgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||| |||| ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||| ||||||||| |||| ||||||    
T  9878781 atgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaatagaatattgctctttt 9878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 42098805 - 42098908
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||| || || |||  |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  42098805 ggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 42098904  T
Q  132 tttt 135  Q
    ||||    
T  42098905 tttt 42098908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 43207339 - 43207237
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| |||||||||||||  |||||  |||||||||  |||||| ||||||||||||||||||| |||||||||||||| ||    
T  43207339 ggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 43207241  T
Q  132 tttt 135  Q
    ||||    
T  43207240 tttt 43207237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 36716122 - 36716024
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||| ||||||||| ||  ||||||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  36716122 ctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 36716024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 18372488 - 18372590
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaac----atatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttct 132  Q
    ||||||||||||||||| |||||||||| || ||||||  |    |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||    
T  18372488 ctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctct 18372587  T
Q  133 ttt 135  Q
    |||    
T  18372588 ttt 18372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 53149416 - 53149313
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||| | || || ||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||| | ||    
T  53149416 ggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctc 53149317  T
Q  132 tttt 135  Q
    ||||    
T  53149316 tttt 53149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 36605974 - 36606065
Alignment:
Q  37 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatc-ttttaaaaaatttaaatagaacattg 128  Q
    ||||||||||||||||| ||||||| || |||||||||  |||||||||  ||||||||||||||| ||||||||||| ||||||||||||||    
T  36605974 ctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattg 36606065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 42453435 - 42453511
Alignment:
Q  59 tcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    |||||||| ||||||   ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 52374657 - 52374763
Alignment:
Q  29 tgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||||  ||||||||||||||||||||||| ||||| | ||||   ||| ||||| |||| |||||||||| |   ||||||||||||||||||||||    
T  52374657 tgaggttcttcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattg 52374756  T
Q  129 ttctttt 135  Q
    |||||||    
T  52374757 ttctttt 52374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 36179549 - 36179482
Alignment:
Q  144 tatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||| |||||||||||||||||||||||||||||||||  | ||| |||||| |||||||||||||||    
T  36179549 tatatatttttattttattacgggcctcttttcacttatgggaccaagcctccggattcgtaggaacg 36179482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 50258690 - 50258622
Alignment:
Q  67 gggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 135  Q
    ||||||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  50258690 gggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaacatcgctctttt 50258622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 52973437 - 52973495
Alignment:
Q  153 ttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||  |||||||||||||    
T  52973437 ttattttattatgggcctcttttctcttacagaatcgagcctctaaattcgtaggaacg 52973495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 29598104 - 29598179
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttat 101  Q
    |||||||| || ||||||||||||||||||| ||||| ||||| |||||  ||||||||||   |||||||||||||    
T  29598104 ggtttgagattcctcatgtatacggtagtga-tttcatctttgagtgtatcacatatatacggaaccttgtatttat 29598179  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 29620490 - 29620423
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtattt 99  Q
    |||| ||||||||||||||||| |||||||||| ||| | |||  |||||||||  ||||||||||||    
T  29620490 ggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 48157143 - 48157185
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtac 74  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||    
T  48157143 ggttcctcatgtatacagtagtcattttcacctttgggtgtac 48157185  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 48157189 - 48157229
Alignment:
Q  88 caccttgtatttatcttttaaaaaatttaaatagaacattg 128  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  48157189 caccttatatttatcttttaaaaaatataaatagatcattg 48157229  T

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Target: scaffold0097 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 38919 - 39108
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| ||||| |||||||||||||||||||| |||| |||||   ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38919 ggtttgaggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 39018  T
Q  125 attgttctt-ttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacgac 213  Q
    |||||| ||            | || ||||||||||||||||| |||||||| |||||||||| ||||||||  ||||||||||||||||    
T  39019 attgtttttaaaaaaaaaaaaaaacgtttttattttattacggacctctttttacttacagaatcgagcctccagattcgtaggaacgac 39108  T

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Target: scaffold0022 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 40079 - 40240
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt--aaaaaatttaaataga 122  Q
    ||||||||||| |||||||||||| | |||||||||||||| |||||||||||||| ||||  |||||||||||||||||||  |||||| |||||||||    
T  40079 ggtttgaggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaataga 40178  T
Q  123 acattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacaga 185  Q
    |||||||||||||         |||||||||||||||||||||  ||||||||||||||||||    
T  40179 acattgttctttttaaaaaaa-atacatttttattttattacgaacctcttttcacttacaga 40240  T

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Target: scaffold0022; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 138139 - 138300
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatctttt--aaaaaatttaaataga 122  Q
    ||||||||||| |||||||||||| | |||||||||||||| |||||||||||||| ||||  |||||||||||||||||||  |||||| |||||||||    
T  138139 ggtttgaggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaataga 138238  T
Q  123 acattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacaga 185  Q
    |||||||||||||         |||||||||||||||||||||  ||||||||||||||||||    
T  138239 acattgttctttttaaaaaaa-atacatttttattttattacgaacctcttttcacttacaga 138300  T

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Target: scaffold0039 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 106539 - 106642
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  106539 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgttc 106638  T
Q  132 tttt 135  Q
    ||||    
T  106639 tttt 106642  T

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Target: scaffold0182 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 24102 - 23993
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    |||||||| || || ||| |||||||| |||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||     
T  24102 ggtttgagattccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaat 24003  T
Q  125 attgttcttt 134  Q
    ||||||||||    
T  24002 attgttcttt 23993  T

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Target: scaffold0182; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 23980 - 23925
Alignment:
Q  156 ttttattacgggcctcttttcacttacagaaccgagcctctggattcgtaggaacg 211  Q
    |||||||| | ||||||||||||||| |||||||||||||   |||||||||||||    
T  23980 ttttattatgagcctcttttcacttagagaaccgagcctccaaattcgtaggaacg 23925  T

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Target: scaffold0018 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 173619 - 173515
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaac 124  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||   |||||||||   ||||||||||||||||||||||||||||||||||||    
T  173619 ggtttgaggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaac 173520  T
Q  125 attgt 129  Q
    |||||    
T  173519 attgt 173515  T

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Target: scaffold0070 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 1344 - 1447
Alignment:
Q  32 ggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 131  Q
    |||| ||||||||||||||||| ||||||| || |||||||||  |||||||||  || ||||||||||||||||||||||| ||||||||||| || ||    
T  1344 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaatagaacagtgctc 1443  T
Q  132 tttt 135  Q
    ||||    
T  1444 tttt 1447  T

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Target: scaffold0003 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 351443 - 351360
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtatttatcttttaa 108  Q
    ||||||||||  ||| ||||| | |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  351443 ggtttgaggtacctcgtgtattcagtagcgattttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 351324 - 351276
Alignment:
Q  147 acatttttattttattacgggcctcttttcacttacagaaccgagcctc 195  Q
    |||||||||||||||||||||| | ||||||| |||||| | |||||||    
T  351324 acatttttattttattacgggcattttttcacatacagagctgagcctc 351276  T

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Target: scaffold0902 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 4490 - 4402
Alignment:
Q  107 aaaaaatttaaatagaacattgttcttttnnnnnnnntatacatttttattttattacgggcctcttttcacttacagaaccgagcctctg 197  Q
    |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  4490 aaaaaatttaaatagaacattgttcttttaataaaa--atacatttttattttattacgggcctctattcacttgcagagccgagcctctg 4402  T

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Target: scaffold0227 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 16021 - 16095
Alignment:
Q  25 ggtttgaggtttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacaacaccttgtattt 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||  |||| |||| ||| |||||||||    
T  16021 ggtttgaggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0227; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 16123 - 16161
Alignment:
Q  89 accttgtatttatcttttaaaaaatttaaatagaacatt 127  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacatt 16161  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 183105 - 183155
Alignment:
Q  76 acatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 126  Q
    |||||||||| | || |||||||||||||||||||||| ||||||||||||    
T  183105 acatatatacgatactttgtatttatcttttaaaaaatataaatagaacat 183155  T

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