View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13515_low_3 (Length: 292)
Name: NF13515_low_3
Description: NF13515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13515_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 271
Target Start/End: Original strand, 14658627 - 14658863
Alignment:
| Q |
33 |
ttctccaaccagtgtttttagaaacaaagggcacatattcgatgatcatagcactaagttacttctgacctaattgatattccttttagctaaaaaccat |
132 |
Q |
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| T |
14658627 |
ttctccaaccagtgttgttagaaacaaagggcacatattcgatgatcatagtactaagttacttttgacctaattgatattctttttagctaaaaatcat |
14658726 |
T |
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| Q |
133 |
tatgtatgtttataaatttgattttacatgatcttgattctacaaaattgatttcagtgtaaatacatttacgttgctgctggttactcttgggtcacat |
232 |
Q |
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| T |
14658727 |
tatgtatgcttataaatttgattttgcatgatcttgattctacaaaattgatttcagtataaatacatttacattgttgctggttactcttgggtcac-- |
14658824 |
T |
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| Q |
233 |
ataattggagagtttcacataggaagttagacttataag |
271 |
Q |
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| T |
14658825 |
attattggagagtttcacataagaagtaagacttgtaag |
14658863 |
T |
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