View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13516_low_19 (Length: 223)
Name: NF13516_low_19
Description: NF13516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13516_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 35379158 - 35379348
Alignment:
| Q |
16 |
gtgggtagaaattcacgcttataagatgaataggtggagaatccgatgttcaaacctcggtccttacatactacaatgtcccaactaaactatgttcaca |
115 |
Q |
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| T |
35379158 |
gtggctagaaattcacgcttataagatgaataggtggagaatccgatgttcaaatctcggtccttatatactacaatgtcccaactaaactatgttcaca |
35379257 |
T |
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| Q |
116 |
gggacgaataaaatactaatggaaatacacacgttttttaaccccaaaaacactcacgttttttaacctgaaaatttatggatatataagt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |
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| T |
35379258 |
gggacgaataaaatactaatggaaatacacacgttttttaaccccaaaaatactcacgttttttaacccgaaaatttatggatataaaagt |
35379348 |
T |
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