View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13517_high_5 (Length: 237)
Name: NF13517_high_5
Description: NF13517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13517_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 43357212 - 43356992
Alignment:
| Q |
1 |
tcatcatcgttctcacttcggtcaaggctaaactcgagctcagtaaggttatttactgttccagaatgggctgaggtccacctcgaatcatttactttgt |
100 |
Q |
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| T |
43357212 |
tcatcatcgttctcacttcggtcaaggctaaactcgagctcagtaaggttatttactgttccggaatgggctgaggtccacctcgaatcatttactttgt |
43357113 |
T |
|
| Q |
101 |
ggtcgtcgaagaccggtgaagtggggcatttttggatgcagaacatatctagggtgttgagttgaagaataaggctttgtttggaattggttttggttgg |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43357112 |
ggtcgtcgaagaacggtgaagtggggcatttttggatgcagaacatatctggggtgttgagttgaagaataaggctttgtttggaattggttttggttgg |
43357013 |
T |
|
| Q |
201 |
gaagagttgcaattttctaag |
221 |
Q |
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||||||||||||||||||||| |
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| T |
43357012 |
gaagagttgcaattttctaag |
43356992 |
T |
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