View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1351R-Insertion-10 (Length: 631)
Name: NF1351R-Insertion-10
Description: NF1351R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1351R-Insertion-10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 584; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 584; E-Value: 0
Query Start/End: Original strand, 8 - 631
Target Start/End: Complemental strand, 22440879 - 22440257
Alignment:
| Q |
8 |
agtttggtaccaatttcatcaattacaatcacttgtggcatgtgattttcaacagcctctatcaataccttatgttgcatatcagaattaggaacttgca |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22440879 |
agtttggtaccaatttcatcaattacaatcacttgtggcatgtgattttcaacagcctctatcaataccttatgttgcatatcagaattaggaacttgca |
22440780 |
T |
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| Q |
108 |
tacgtcgagcagtacctattccagcatgaggtatatcaccatcaccaccaatctcattagaggtatcaacaatcatgacacgcttgttgtaatcatttgc |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
22440779 |
tacgtcgagcagtacctattccagcatgaggtatatcaccatcaccaccaatctcattagaagtatcaacaatcatgacacgcttgttgtaatcatttgc |
22440680 |
T |
|
| Q |
208 |
cagcatccgagcaatttccctaatgattgtagtttttcctacacctggaggcccaataagcaacaaagaagacccatcttgaaccaaatcttgcaacaat |
307 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22440679 |
cagcatccgagctatttccctaatgattgtagtttttcctacacctggaggcccaataagcaacaaagaagacccatcttgaaccaaatcttgcaacaat |
22440580 |
T |
|
| Q |
308 |
ttagcacttcctgaaattgctctaccaacacgacaagtaagaccaataattgtacctttccgatttctaatagcacttatcctatgcaatgttctactga |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22440579 |
ttagcacttcctgaaattgctctaccaacacgacaagtaagaccaataattgtacctttccgatttctaatagcacttatcctatgcaatgttctactga |
22440480 |
T |
|
| Q |
408 |
ttcctgctcgattgtcgacagcaaaatcaccaacctgagcagtagcatactgaatatcctcgccagtgattggatactccgatataacaaaatccccgga |
507 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
22440479 |
ttcctgctcgattgtcaacagcaaaatcaccaacctgagcagtagcatactgaatatcctcaacagtgattggatactccgatataacaaaatccccgga |
22440380 |
T |
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| Q |
508 |
aggaaaccgagccaacggtttcctccctaaatccataaccacttctatcaacatctgcacctccggatgctcactcacctgtctccgcatctcctccggg |
607 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
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| T |
22440379 |
aggaaaacgagccaacggtttcctccctaaatccataaccacttcgatcaacatctgcacctccggatgctcactcacccgtctccgcatctcctcc-gg |
22440281 |
T |
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| Q |
608 |
caatagagacagcaaacgccccag |
631 |
Q |
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|||||||||||||||||||||||| |
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| T |
22440280 |
caatagagacagcaaacgccccag |
22440257 |
T |
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