View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1351R-Insertion-11 (Length: 614)

Name: NF1351R-Insertion-11
Description: NF1351R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1351R-Insertion-11
NF1351R-Insertion-11
[»] chr3 (31 HSPs)
chr3 (9-239)||(7756115-7756345)
chr3 (377-614)||(7756523-7756760)
chr3 (240-296)||(36418060-36418116)
chr3 (238-292)||(33689755-33689809)
chr3 (238-291)||(40033833-40033886)
chr3 (239-290)||(33689381-33689432)
chr3 (234-296)||(3850499-3850561)
chr3 (240-290)||(9294336-9294386)
chr3 (240-290)||(40758147-40758197)
chr3 (239-296)||(19741264-19741321)
chr3 (238-290)||(23458357-23458409)
chr3 (240-296)||(34142590-34142646)
chr3 (238-290)||(40758488-40758540)
chr3 (230-290)||(41557998-41558058)
chr3 (238-290)||(42342789-42342841)
chr3 (243-290)||(36150530-36150577)
chr3 (243-290)||(46474818-46474865)
chr3 (238-296)||(2796177-2796235)
chr3 (238-296)||(51993962-51994020)
chr3 (243-296)||(36417691-36417744)
chr3 (243-288)||(42343111-42343156)
chr3 (243-288)||(53756747-53756792)
chr3 (242-290)||(9292245-9292293)
chr3 (239-290)||(26463964-26464015)
chr3 (246-296)||(9368673-9368723)
chr3 (230-296)||(19740913-19740979)
chr3 (243-296)||(21783403-21783454)
chr3 (243-288)||(26463635-26463680)
chr3 (241-290)||(35712045-35712094)
chr3 (243-288)||(46475160-46475205)
chr3 (241-290)||(51994264-51994313)
[»] chr5 (64 HSPs)
chr5 (234-296)||(20840527-20840589)
chr5 (232-290)||(28269414-28269472)
chr5 (238-296)||(5993887-5993945)
chr5 (238-296)||(14194421-14194479)
chr5 (239-292)||(6150453-6150506)
chr5 (238-290)||(20814513-20814565)
chr5 (240-296)||(35920556-35920612)
chr5 (243-290)||(13362606-13362653)
chr5 (239-290)||(16157233-16157284)
chr5 (237-296)||(35512486-35512545)
chr5 (238-296)||(28770867-28770925)
chr5 (240-290)||(28771216-28771266)
chr5 (239-296)||(3528872-3528929)
chr5 (238-287)||(6150801-6150850)
chr5 (239-296)||(11761748-11761805)
chr5 (239-296)||(11762089-11762146)
chr5 (241-290)||(18247087-18247136)
chr5 (239-296)||(18670201-18670258)
chr5 (239-296)||(21265514-21265571)
chr5 (237-290)||(38475377-38475430)
chr5 (239-296)||(39453671-39453728)
chr5 (239-296)||(42265734-42265791)
chr5 (240-296)||(186791-186847)
chr5 (240-296)||(3529214-3529270)
chr5 (240-288)||(5024019-5024067)
chr5 (238-290)||(13963207-13963259)
chr5 (228-292)||(16083319-16083383)
chr5 (240-296)||(17202771-17202827)
chr5 (242-290)||(19892310-19892358)
chr5 (238-290)||(20840815-20840867)
chr5 (240-296)||(27587148-27587204)
chr5 (238-290)||(29646360-29646412)
chr5 (242-290)||(39453302-39453350)
chr5 (243-290)||(5024396-5024443)
chr5 (238-289)||(14194801-14194852)
chr5 (239-290)||(18247454-18247505)
chr5 (239-290)||(24547503-24547554)
chr5 (241-292)||(38442443-38442494)
chr5 (243-290)||(43159192-43159239)
chr5 (238-296)||(13962862-13962920)
chr5 (240-290)||(27587493-27587543)
chr5 (238-288)||(32242240-32242290)
chr5 (238-296)||(35512146-35512204)
chr5 (239-292)||(5835622-5835675)
chr5 (245-290)||(8322782-8322827)
chr5 (243-288)||(11740690-11740735)
chr5 (241-286)||(11741899-11741944)
chr5 (241-290)||(16156856-16156905)
chr5 (241-290)||(35920229-35920278)
chr5 (239-290)||(6301921-6301970)
chr5 (235-287)||(19517988-19518040)
chr5 (242-290)||(19892686-19892734)
chr5 (238-290)||(20814134-20814186)
chr5 (238-286)||(28269762-28269809)
chr5 (239-287)||(32242622-32242670)
chr5 (243-290)||(11047814-11047861)
chr5 (239-290)||(17202398-17202449)
chr5 (243-289)||(21257540-21257586)
chr5 (238-296)||(24547175-24547233)
chr5 (238-296)||(37991197-37991255)
chr5 (243-296)||(5835798-5835851)
chr5 (243-288)||(27937379-27937424)
chr5 (239-287)||(186419-186466)
chr5 (242-286)||(37992670-37992714)
[»] chr4 (65 HSPs)
chr4 (242-296)||(54087067-54087121)
chr4 (238-296)||(35027996-35028054)
chr4 (238-296)||(51692891-51692949)
chr4 (235-296)||(24349669-24349730)
chr4 (239-296)||(46661286-46661343)
chr4 (239-288)||(53129886-53129935)
chr4 (240-296)||(18831689-18831745)
chr4 (236-292)||(34765756-34765812)
chr4 (239-290)||(1178056-1178107)
chr4 (238-296)||(7451832-7451890)
chr4 (238-296)||(36008842-36008900)
chr4 (238-288)||(37976533-37976583)
chr4 (238-296)||(43155868-43155926)
chr4 (238-296)||(50418666-50418724)
chr4 (239-296)||(13058354-13058411)
chr4 (239-296)||(17355924-17355981)
chr4 (239-296)||(24711110-24711167)
chr4 (238-287)||(35508621-35508670)
chr4 (238-290)||(148133-148185)
chr4 (238-290)||(10781862-10781914)
chr4 (238-290)||(13058035-13058087)
chr4 (239-295)||(24350805-24350861)
chr4 (238-290)||(24711458-24711510)
chr4 (238-290)||(39539296-39539348)
chr4 (236-296)||(44967410-44967470)
chr4 (238-290)||(50419015-50419067)
chr4 (239-290)||(1179178-1179229)
chr4 (239-290)||(10780712-10780763)
chr4 (239-290)||(10974321-10974372)
chr4 (239-290)||(14801735-14801786)
chr4 (239-290)||(23613308-23613359)
chr4 (238-296)||(36009185-36009244)
chr4 (239-290)||(48528484-48528535)
chr4 (241-296)||(49879208-49879263)
chr4 (243-290)||(54086698-54086745)
chr4 (240-290)||(7452181-7452231)
chr4 (242-288)||(15508052-15508098)
chr4 (238-288)||(24411728-24411778)
chr4 (238-288)||(51692551-51692601)
chr4 (239-288)||(11448109-11448158)
chr4 (241-290)||(15507674-15507723)
chr4 (239-296)||(18831348-18831405)
chr4 (243-296)||(37248577-37248630)
chr4 (243-296)||(37976156-37976209)
chr4 (241-290)||(52909254-52909303)
chr4 (240-296)||(147319-147375)
chr4 (240-288)||(23613658-23613706)
chr4 (242-290)||(44967071-44967119)
chr4 (238-290)||(55867492-55867544)
chr4 (239-290)||(5368946-5368997)
chr4 (240-295)||(5369240-5369295)
chr4 (239-290)||(35028376-35028427)
chr4 (239-290)||(53702176-53702227)
chr4 (240-291)||(55866111-55866162)
chr4 (242-296)||(17356294-17356348)
chr4 (242-296)||(24411360-24411414)
chr4 (242-296)||(37248238-37248292)
chr4 (239-285)||(53129505-53129551)
chr4 (242-288)||(53701814-53701860)
chr4 (243-288)||(11108220-11108265)
chr4 (243-296)||(43155532-43155585)
chr4 (242-290)||(16006171-16006219)
chr4 (238-286)||(34765378-34765426)
chr4 (238-290)||(41582445-41582497)
chr4 (238-290)||(52909631-52909683)
[»] chr8 (41 HSPs)
chr8 (238-294)||(16388581-16388637)
chr8 (238-296)||(23698616-23698674)
chr8 (238-296)||(39072013-39072071)
chr8 (235-296)||(23663540-23663601)
chr8 (242-290)||(9065667-9065715)
chr8 (242-290)||(34177348-34177396)
chr8 (240-296)||(39071676-39071732)
chr8 (231-290)||(12198941-12199000)
chr8 (231-290)||(12443369-12443428)
chr8 (240-290)||(4406038-4406088)
chr8 (238-292)||(13186435-13186489)
chr8 (236-290)||(23663892-23663946)
chr8 (238-288)||(33357496-33357546)
chr8 (239-292)||(13186059-13186112)
chr8 (239-296)||(20386802-20386859)
chr8 (240-292)||(16388902-16388954)
chr8 (240-296)||(20385568-20385624)
chr8 (240-296)||(38956044-38956100)
chr8 (239-290)||(4995034-4995085)
chr8 (239-290)||(8316652-8316703)
chr8 (239-290)||(8316966-8317017)
chr8 (243-290)||(38862941-38862988)
chr8 (238-296)||(1425051-1425109)
chr8 (238-296)||(12273225-12273283)
chr8 (239-288)||(31608526-31608575)
chr8 (242-287)||(40317966-40318011)
chr8 (238-290)||(35756582-35756633)
chr8 (244-296)||(36186105-36186157)
chr8 (239-287)||(40318345-40318393)
chr8 (238-288)||(4994655-4994705)
chr8 (240-290)||(31608891-31608941)
chr8 (240-290)||(34685635-34685685)
chr8 (238-284)||(36186448-36186494)
chr8 (240-290)||(42803596-42803646)
chr8 (241-290)||(1425399-1425448)
chr8 (236-288)||(7294098-7294149)
chr8 (238-290)||(7313383-7313435)
chr8 (242-290)||(12199284-12199332)
chr8 (242-290)||(12272920-12272968)
chr8 (242-290)||(12443712-12443760)
chr8 (238-290)||(34060487-34060539)
[»] chr1 (60 HSPs)
chr1 (243-290)||(46163033-46163080)
chr1 (238-296)||(47999464-47999522)
chr1 (231-288)||(4960531-4960588)
chr1 (240-296)||(6367562-6367618)
chr1 (238-290)||(19515817-19515869)
chr1 (238-290)||(23209705-23209757)
chr1 (238-290)||(30711705-30711757)
chr1 (238-290)||(36694280-36694332)
chr1 (238-290)||(36710381-36710433)
chr1 (239-290)||(17661851-17661902)
chr1 (239-294)||(17662224-17662279)
chr1 (238-288)||(1841838-1841888)
chr1 (240-290)||(24009575-24009625)
chr1 (230-296)||(26024764-26024830)
chr1 (240-290)||(34464449-34464499)
chr1 (238-296)||(35473629-35473687)
chr1 (238-296)||(37578190-37578248)
chr1 (238-296)||(43759194-43759252)
chr1 (239-296)||(6367934-6367991)
chr1 (241-290)||(13300282-13300331)
chr1 (239-296)||(25647883-25647940)
chr1 (238-290)||(5734008-5734060)
chr1 (238-290)||(34464827-34464879)
chr1 (240-296)||(34850437-34850493)
chr1 (238-290)||(35152341-35152393)
chr1 (239-291)||(37578569-37578621)
chr1 (242-290)||(40210748-40210796)
chr1 (240-296)||(40772507-40772563)
chr1 (238-290)||(41098731-41098783)
chr1 (238-296)||(183563-183622)
chr1 (243-290)||(40435348-40435395)
chr1 (241-288)||(48692394-48692441)
chr1 (240-290)||(14879336-14879386)
chr1 (238-292)||(19322890-19322944)
chr1 (241-287)||(35152711-35152757)
chr1 (240-290)||(46899061-46899111)
chr1 (239-288)||(7231629-7231678)
chr1 (238-287)||(13914066-13914115)
chr1 (243-296)||(17692557-17692610)
chr1 (239-288)||(19017628-19017677)
chr1 (239-296)||(40772831-40772888)
chr1 (238-287)||(42533022-42533071)
chr1 (240-296)||(183221-183277)
chr1 (240-288)||(30711327-30711375)
chr1 (240-296)||(34849011-34849067)
chr1 (238-290)||(36694626-36694678)
chr1 (238-290)||(36710727-36710779)
chr1 (242-290)||(42248475-42248523)
chr1 (240-296)||(47999123-47999179)
chr1 (240-287)||(6518177-6518224)
chr1 (239-290)||(7821331-7821382)
chr1 (239-290)||(26024422-26024473)
chr1 (247-290)||(49723104-49723147)
chr1 (240-290)||(32917638-32917688)
chr1 (239-296)||(1103833-1103890)
chr1 (239-292)||(5735087-5735140)
chr1 (239-296)||(7820953-7821010)
chr1 (241-290)||(13914445-13914494)
chr1 (238-290)||(19018007-19018059)
chr1 (239-287)||(48779500-48779548)
[»] chr7 (46 HSPs)
chr7 (238-296)||(27396967-27397025)
chr7 (238-296)||(28469380-28469438)
chr7 (238-288)||(42731799-42731849)
chr7 (238-292)||(45010980-45011034)
chr7 (238-290)||(5457285-5457337)
chr7 (239-290)||(24389163-24389214)
chr7 (239-290)||(27396628-27396679)
chr7 (239-290)||(28469009-28469060)
chr7 (238-296)||(48788801-48788859)
chr7 (239-296)||(2640177-2640234)
chr7 (239-296)||(6571012-6571069)
chr7 (239-296)||(17102019-17102076)
chr7 (239-296)||(19204488-19204545)
chr7 (241-290)||(23181372-23181421)
chr7 (240-296)||(10935794-10935850)
chr7 (238-290)||(17102367-17102419)
chr7 (241-296)||(6253472-6253527)
chr7 (239-290)||(6253818-6253869)
chr7 (239-290)||(10936172-10936223)
chr7 (239-286)||(32053142-32053189)
chr7 (243-294)||(42019971-42020022)
chr7 (238-296)||(20426702-20426760)
chr7 (238-296)||(28105499-28105557)
chr7 (240-290)||(40380062-40380112)
chr7 (240-290)||(42362450-42362500)
chr7 (240-290)||(42731419-42731469)
chr7 (239-296)||(22871649-22871706)
chr7 (243-296)||(27992080-27992133)
chr7 (239-288)||(29141556-29141605)
chr7 (239-296)||(32298776-32298833)
chr7 (245-290)||(40379774-40379819)
chr7 (241-290)||(42019598-42019647)
chr7 (240-296)||(18670235-18670291)
chr7 (242-290)||(24388821-24388869)
chr7 (238-290)||(29144360-29144412)
chr7 (240-288)||(37657217-37657265)
chr7 (240-296)||(43123175-43123231)
chr7 (241-296)||(32299077-32299132)
chr7 (240-289)||(2640557-2640607)
chr7 (240-290)||(13386125-13386175)
chr7 (238-288)||(17886870-17886920)
chr7 (239-288)||(27991738-27991787)
chr7 (239-292)||(47945356-47945409)
chr7 (239-292)||(47950786-47950839)
chr7 (232-296)||(18086281-18086345)
chr7 (238-290)||(22828196-22828247)
[»] chr6 (26 HSPs)
chr6 (238-296)||(30726131-30726189)
chr6 (238-296)||(33647323-33647381)
chr6 (239-296)||(3059628-3059685)
chr6 (239-296)||(33517906-33517963)
chr6 (239-290)||(11393182-11393233)
chr6 (238-296)||(30337447-30337505)
chr6 (239-292)||(17734195-17734248)
chr6 (239-296)||(21628085-21628142)
chr6 (235-288)||(30804241-30804294)
chr6 (243-296)||(33517537-33517590)
chr6 (238-290)||(681106-681158)
chr6 (238-290)||(8090305-8090357)
chr6 (237-296)||(20651007-20651066)
chr6 (238-296)||(12081008-12081066)
chr6 (238-296)||(13379854-13379912)
chr6 (238-296)||(26463177-26463235)
chr6 (239-288)||(21627712-21627761)
chr6 (242-290)||(11434804-11434852)
chr6 (240-296)||(30337790-30337846)
chr6 (239-290)||(679865-679916)
chr6 (242-288)||(12080638-12080684)
chr6 (240-290)||(15115339-15115389)
chr6 (240-290)||(15116610-15116660)
chr6 (243-289)||(22617886-22617932)
chr6 (238-290)||(12408549-12408601)
chr6 (240-296)||(26464571-26464627)
[»] scaffold0707 (1 HSPs)
scaffold0707 (239-296)||(6451-6508)
[»] chr2 (40 HSPs)
chr2 (239-290)||(3555249-3555300)
chr2 (237-296)||(11163395-11163454)
chr2 (239-290)||(34447812-34447863)
chr2 (239-290)||(36755466-36755517)
chr2 (239-290)||(45556425-45556476)
chr2 (238-288)||(39423895-39423945)
chr2 (239-292)||(2318886-2318939)
chr2 (239-296)||(15848087-15848144)
chr2 (238-291)||(15848465-15848518)
chr2 (239-296)||(16099396-16099453)
chr2 (239-296)||(36382499-36382556)
chr2 (239-296)||(37895346-37895403)
chr2 (236-296)||(6657874-6657934)
chr2 (240-296)||(10713095-10713151)
chr2 (243-290)||(6588686-6588733)
chr2 (241-292)||(36755094-36755145)
chr2 (232-290)||(25231226-25231284)
chr2 (240-290)||(39423515-39423565)
chr2 (238-296)||(44045374-44045432)
chr2 (244-290)||(44713799-44713845)
chr2 (237-290)||(34448173-34448226)
chr2 (247-296)||(39498317-39498366)
chr2 (239-296)||(45556111-45556168)
chr2 (240-296)||(6658219-6658275)
chr2 (240-288)||(21370582-21370630)
chr2 (240-296)||(25230102-25230158)
chr2 (238-290)||(36382159-36382211)
chr2 (242-290)||(36480096-36480144)
chr2 (238-290)||(39498657-39498709)
chr2 (240-290)||(6307096-6307145)
chr2 (240-290)||(9076445-9076495)
chr2 (240-290)||(30729621-30729671)
chr2 (243-293)||(37895722-37895772)
chr2 (238-296)||(44714133-44714190)
chr2 (251-296)||(13692592-13692637)
chr2 (242-290)||(36479719-36479768)
chr2 (239-296)||(44044113-44044170)
chr2 (242-290)||(10712725-10712773)
chr2 (240-296)||(11163054-11163110)
chr2 (240-296)||(16099055-16099111)
[»] scaffold0075 (2 HSPs)
scaffold0075 (238-287)||(14427-14476)
scaffold0075 (240-290)||(14768-14818)
[»] scaffold0031 (2 HSPs)
scaffold0031 (240-296)||(68965-69021)
scaffold0031 (240-296)||(69337-69393)
[»] scaffold0007 (2 HSPs)
scaffold0007 (239-295)||(2114-2170)
scaffold0007 (238-296)||(1767-1825)
[»] scaffold0005 (1 HSPs)
scaffold0005 (239-290)||(37941-37992)
[»] scaffold0020 (2 HSPs)
scaffold0020 (238-296)||(139670-139728)
scaffold0020 (243-296)||(140013-140066)
[»] scaffold0775 (1 HSPs)
scaffold0775 (238-288)||(4960-5010)
[»] scaffold0128 (1 HSPs)
scaffold0128 (243-296)||(19860-19913)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 7756115 - 7756345
Alignment:
Q  9 ctccgcttcccttgataaggttgttgagttaagtcaagacaactctatttgtcttcttcgttcacgtatttctttcagttccgtcgaccatcttccagcg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  7756115 ctccgcttcccttgataaggttgttgagttaagtcaagacaactctatttgtcttcttcgttcacgtatttctttcagttccgtcgaccttcttccaccg 7756214  T
Q  109 accctcttccgacatcgactcacctttttgagtcaacggagtcacagcttttatggttgctacttttttggtgagattgcccattttcttcttcttggtt 208  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||| |||    
T  7756215 accctcttccgccatcgactcacctttttgagtcaacggagtcacaacttttagggtttctacttttttggtaagattgcccattttcttcttctttgtt 7756314  T
Q  209 ttccacagaggccttttattctttctttcta 239  Q
    ||||||| ||||||||||||| |||||||||    
T  7756315 ttccacacaggccttttattcattctttcta 7756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 377 - 614
Target Start/End: Original strand, 7756523 - 7756760
Alignment:
Q  377 agttctgatttatgcagagaaccctgtactaactcataatttaacaaaacccgcgatagttaagcaaaagatgttacctgcagaatacgacattggcaat 476  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||| |    ||||||||||||||||||||||||||||  |||||    
T  7756523 agttctgatttatgcatagaaccctgtactaagtcataatttaacaaaatccacgatagctgcaaaaaagatgttacctgcagaatacgacatcagcaat 7756622  T
Q  477 gatcattgctaggtcctatatagaaaaagcgaattgtggtgcctactcttagaaatgcatgtgcaagaaattataaagagattgtcaaaacttactggat 576  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  7756623 gatcattgctagctcctatatagaaaaagcaaattgtggtgcctactcttagaaaagcatgtgcaataaattataaagagattgtcaaaacttacttgat 7756722  T
Q  577 ttatgggcagcatcttttgatattgcttctctattgca 614  Q
    |||| |||||||||||||||||||||||||||||||||    
T  7756723 ttattggcagcatcttttgatattgcttctctattgca 7756760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 36418116 - 36418060
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgt 36418060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 33689809 - 33689755
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttc 33689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 40033886 - 40033833
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 291  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtt 40033833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 33689381 - 33689432
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 33689432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 3850561 - 3850499
Alignment:
Q  234 tttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||| |||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||    
T  3850561 tttcttggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgt 3850499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 9294386 - 9294336
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 9294336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 40758147 - 40758197
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40758197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 19741321 - 19741264
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 19741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 23458409 - 23458357
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggt 23458357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 34142646 - 34142590
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 34142590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 40758540 - 40758488
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggt 40758488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 41557998 - 41558058
Alignment:
Q  230 tttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||| ||||||||||||||||||||||  ||| ||| | |||||||||||||||||||    
T  41557998 tttctttttaggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggt 41558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 42342789 - 42342841
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 42342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 36150530 - 36150577
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36150577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 46474818 - 46474865
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggt 46474865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 2796177 - 2796235
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgt 2796235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 51993962 - 51994020
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| || |||||||||||||||||| |||||    
T  51993962 taggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgt 51994020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 36417691 - 36417744
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||| |||| ||||||| ||||||| ||||||||||||||||||||| |||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgt 36417744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 42343156 - 42343111
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattg 42343111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 53756747 - 53756792
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattg 53756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 9292245 - 9292293
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| |||| ||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggt 9292293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 26464015 - 26463964
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| || | ||||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggt 26463964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 9368723 - 9368673
Alignment:
Q  246 aatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||| || ||| ||| ||||||||||||||||||||| |||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgt 9368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 19740913 - 19740979
Alignment:
Q  230 tttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||||||||||| ||   || ||| |||| |||||||||||||||| |||||    
T  19740913 tttccttctaggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgt 19740979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 21783403 - 21783454
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||||||| | |||||||||  ||||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgt 21783454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 26463635 - 26463680
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||| | |||||||||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 26463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 35712045 - 35712094
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||| ||| |||| || |||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggt 35712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 46475205 - 46475160
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||  ||| |||||||||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattg 46475160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 51994313 - 51994264
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 51994264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 20840527 - 20840589
Alignment:
Q  234 tttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  20840527 tttctaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgt 20840589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 28269414 - 28269472
Alignment:
Q  232 tctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  28269414 tctttgtaggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggt 28269472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 5993887 - 5993945
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  5993887 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 5993945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 14194421 - 14194479
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  14194421 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 14194479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 6150453 - 6150506
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttc 6150506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 20814565 - 20814513
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 20814513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 35920612 - 35920556
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgt 35920556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 13362653 - 13362606
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggt 13362606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 16157284 - 16157233
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 35512545 - 35512486
Alignment:
Q  237 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  35512545 ctagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 35512486  T

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Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 28770867 - 28770925
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 28770925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 28771266 - 28771216
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggt 28771216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 3528872 - 3528929
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 3528929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 6150850 - 6150801
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  6150850 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 6150801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 11761748 - 11761805
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 11761805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 11762146 - 11762089
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 11762089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 18247087 - 18247136
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 18247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 18670201 - 18670258
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||||||||||| |||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgt 18670258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 21265571 - 21265514
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||  ||| | |||||||||||||||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgt 21265514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 38475430 - 38475377
Alignment:
Q  237 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  38475430 ctaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggt 38475377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 39453728 - 39453671
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| |||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgt 39453671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 42265734 - 42265791
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgt 42265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 186847 - 186791
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| || |||||||||||||||||| |||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgt 186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 3529270 - 3529214
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 3529214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 5024019 - 5024067
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 5024067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 13963259 - 13963207
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  13963259 taggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggt 13963207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 16083383 - 16083319
Alignment:
Q  228 tctttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||  |||||||||||||||||||||| ||| ||| | || ||||||||||||||||||    
T  16083383 tctttctttaaaggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttc 16083319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 17202827 - 17202771
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgt 17202771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 19892310 - 19892358
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 19892358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 20840867 - 20840815
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 20840815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 27587148 - 27587204
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 27587204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 29646360 - 29646412
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggt 29646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 39453302 - 39453350
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 39453350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 5024443 - 5024396
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 5024396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 14194852 - 14194801
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattgg 289  Q
    |||||||||| |||| ||||||| ||||||| ||||||||||||||||||||    
T  14194852 taggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg 14194801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 18247505 - 18247454
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggt 18247454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 24547554 - 24547503
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 24547503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 38442494 - 38442443
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||| |||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttc 38442443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 43159239 - 43159192
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 43159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 13962862 - 13962920
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  13962862 taggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgt 13962920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 27587543 - 27587493
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 27587493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 32242240 - 32242290
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||| |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  32242240 tagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 32242290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 35512146 - 35512204
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  35512146 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 35512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 5835622 - 5835675
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||||||  || |||| |||| ||||||||||||||||||    
T  5835622 aggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttc 5835675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 8322827 - 8322782
Alignment:
Q  245 aaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 8322782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 11740690 - 11740735
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 11740735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 11741944 - 11741899
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 286  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaat 11741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 16156856 - 16156905
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggt 16156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 35920229 - 35920278
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggt 35920278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 6301970 - 6301921
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  6301970 aggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggt 6301921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 19518040 - 19517988
Alignment:
Q  235 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||| |||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  19518040 ttctaagcttaaatatgtatttcatccttgcaattaggggtagtttaaaaatt 19517988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 19892734 - 19892686
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 19892686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 20814134 - 20814186
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||  ||| || ||||||||||||||||||    
T  20814134 taggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggt 20814186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 28269809 - 28269762
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 286  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  28269809 taggcttaaatatgtatttcatc-ttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 32242670 - 32242622
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    |||||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaatt 32242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 11047861 - 11047814
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggt 11047814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 17202398 - 17202449
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||| ||||||||| ||  ||| |||||||||||||||||||||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggt 17202449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 21257586 - 21257540
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattgg 289  Q
    ||||||||||||||||||  || ||| ||||||||||||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattgg 21257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 24547175 - 24547233
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||| || ||| ||| ||| |||||||||| |||||||||| |||||    
T  24547175 taggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgt 24547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 37991197 - 37991255
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||| | ||||||  || ||| ||||||||||||||||||||| |||||    
T  37991197 taggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgt 37991255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 5835851 - 5835798
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| || ||||||||||||||| ||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgt 5835798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||| | |||||||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 186419 - 186466
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    |||||||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  186419 aggcttaaatatttatttcatc-ttgaaattaggggtcgtttaaaaatt 186466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 37992714 - 37992670
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 286  Q
    |||||||||||||||||||  || ||| |||||||||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 54087121 - 54087067
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgt 54087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 35027996 - 35028054
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  35027996 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgt 35028054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 51692949 - 51692891
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 51692891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 24349669 - 24349730
Alignment:
Q  235 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  24349669 ttctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 24349730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 46661343 - 46661286
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 46661286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 53129935 - 53129886
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattg 53129886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 18831745 - 18831689
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 18831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 34765812 - 34765756
Alignment:
Q  236 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  34765812 tctaggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttc 34765756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 1178056 - 1178107
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggt 1178107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 7451832 - 7451890
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 7451890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 36008842 - 36008900
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||||||| |||| |||||||||||||||| |||||    
T  36008842 taggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgt 36008900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 37976583 - 37976533
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  37976583 taggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattg 37976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 43155926 - 43155868
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| || |||| ||||||||||||||||||||| |||||    
T  43155926 taggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgt 43155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 50418666 - 50418724
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 50418724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 13058411 - 13058354
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgt 13058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 17355924 - 17355981
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||||||||||||| ||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgt 17355981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 24711110 - 24711167
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 24711167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 35508670 - 35508621
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 148185 - 148133
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||||  || ||| |||||||||||||||||||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggt 148133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 10781914 - 10781862
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 10781862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 13058035 - 13058087
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  13058035 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 13058087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 24350861 - 24350805
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctg 295  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctg 24350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 24711510 - 24711458
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  24711510 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 24711458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 39539348 - 39539296
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 39539296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 44967470 - 44967410
Alignment:
Q  236 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||| || |||||||||||||||||| |||||    
T  44967470 tctaggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgt 44967410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 50419067 - 50419015
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  50419067 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 50419015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 1179229 - 1179178
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggt 1179178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 10780712 - 10780763
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 10780763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 10974321 - 10974372
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 10974372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 14801735 - 14801786
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 14801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 23613308 - 23613359
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 23613359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 36009244 - 36009185
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatca-ggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||||||||||| |||||    
T  36009244 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgt 36009185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 48528484 - 48528535
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 48528535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 49879208 - 49879263
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 49879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 54086698 - 54086745
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 54086745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 7452231 - 7452181
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 7452181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 15508098 - 15508052
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 15508052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 24411778 - 24411728
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||    
T  24411778 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 24411728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 51692551 - 51692601
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 51692601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 11448158 - 11448109
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattg 11448109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 15507674 - 15507723
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 15507723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 18831348 - 18831405
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||  ||| ||||||||||||||||||||| |||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgt 18831405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 37248630 - 37248577
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 37248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 37976156 - 37976209
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| || ||||||||||||| ||||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgt 37976209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 52909254 - 52909303
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||| ||| |||||||||| ||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggt 52909303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 147319 - 147375
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||  |  ||| ||||||||||||||||||||| |||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgt 147375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 23613706 - 23613658
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattg 23613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 44967071 - 44967119
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 44967119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 55867544 - 55867492
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| |||  || ||| |||||||||||||||||||||    
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggt 55867492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 5368946 - 5368997
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 5368997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 5369295 - 5369240
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctg 295  Q
    ||||||||||||||||| ||| || |||  ||||||||||||||||||||| ||||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctg 5369240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 35028427 - 35028376
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| ||||||  |||||||||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggt 35028376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 53702227 - 53702176
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| || ||| ||||||||||||||    
T  53702227 aggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggt 53702176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 55866111 - 55866162
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 291  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtt 55866162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 17356348 - 17356294
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||  ||| | ||||||||||||||||||| |||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgt 17356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 24411360 - 24411414
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| | | ||| |||||| |||||||||||||| |||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgt 24411414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 37248238 - 37248292
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||| | | ||| ||| ||||||||||||||||||||| |||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgt 37248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 53129505 - 53129551
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaa 285  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||||||    
T  53129505 aggcttaaatatgtattttatcattgcaattagggatcgtttaaaaa 53129551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 53701814 - 53701860
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattg 53701860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 11108265 - 11108220
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 11108220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 43155532 - 43155585
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||| ||| ||| ||| | ||||||||||||||||||| |||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgt 43155585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 16006219 - 16006171
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggt 16006171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 34765378 - 34765426
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 286  Q
    ||||||||||||||||||| ||| ||| ||| | |||||||||||||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaat 34765426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 41582445 - 41582497
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||| ||||||| |||||||  || ||||||||||| |||||||||||||    
T  41582445 taggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggt 41582497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 52909683 - 52909631
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| | || || |||||||||||||    
T  52909683 taggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggt 52909631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 16388581 - 16388637
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcct 294  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  16388581 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcct 16388637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 23698674 - 23698616
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgt 23698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 39072071 - 39072013
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||    
T  39072071 taggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgt 39072013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 23663540 - 23663601
Alignment:
Q  235 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||| |||||    
T  23663540 ttctaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 23663601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 9065667 - 9065715
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggt 9065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 34177396 - 34177348
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggt 34177348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 39071676 - 39071732
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 39071732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 12198941 - 12199000
Alignment:
Q  231 ttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  12198941 ttctttataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 12199000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 12443369 - 12443428
Alignment:
Q  231 ttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  12443369 ttctttataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 12443428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 4406088 - 4406038
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggt 4406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 13186489 - 13186435
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  13186489 taggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttc 13186435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 23663946 - 23663892
Alignment:
Q  236 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  23663946 tctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 23663892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 33357496 - 33357546
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  33357496 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 33357546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 13186059 - 13186112
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttc 13186112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 20386859 - 20386802
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 20386802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 16388954 - 16388902
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttc 16388902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 20385568 - 20385624
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 20385624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 38956100 - 38956044
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 38956044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 4995085 - 4995034
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggt 4995034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 8316652 - 8316703
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggt 8316703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 8317017 - 8316966
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 8316966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 38862988 - 38862941
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 38862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 1425051 - 1425109
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  1425051 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 1425109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 12273283 - 12273225
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  12273283 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 12273225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 31608526 - 31608575
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||||||||||    
T  31608526 aggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattg 31608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 40317966 - 40318011
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 40318011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 35756582 - 35756633
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||||| || ||| ||||||| |||||||||||||    
T  35756582 taggcttaaatatgtatttcatca-tgcaattaggggtcatttaaaaattggt 35756633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 36186105 - 36186157
Alignment:
Q  244 taaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| ||||| |||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgt 36186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 40318393 - 40318345
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    |||||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaatt 40318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 4994655 - 4994705
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||| ||| |||| | ||||||||||||    
T  4994655 taggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattg 4994705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 31608941 - 31608891
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||| |||||||||| ||| ||| | |||||||||||||||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggt 31608891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 34685685 - 34685635
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggt 34685635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 36186494 - 36186448
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaa 284  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||    
T  36186494 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 42803646 - 42803596
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| ||  |||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggt 42803596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 1425448 - 1425399
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||| ||||| ||| ||||||| || ||||||||||||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggt 1425399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 7294098 - 7294149
Alignment:
Q  236 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||| |||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  7294098 tctaagcttaaatatgtatttcatc-ttgcaattagaggtcgtttaaaaattg 7294149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 7313435 - 7313383
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| |||  || ||  |||||||||||||||||||||    
T  7313435 taggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggt 7313383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 12199332 - 12199284
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| ||| || |||| ||| |||||||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggt 12199284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 12272920 - 12272968
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 12272968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 12443760 - 12443712
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| ||| || |||| ||| |||||||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggt 12443712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 34060487 - 34060539
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |   |||||||||||||||||    
T  34060487 taggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggt 34060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 46163033 - 46163080
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggt 46163080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 47999522 - 47999464
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgt 47999464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 4960531 - 4960588
Alignment:
Q  231 ttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  4960531 ttctttcttagcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattg 4960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 6367562 - 6367618
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 6367618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 19515817 - 19515869
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 19515869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 23209757 - 23209705
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 23209705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 30711757 - 30711705
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  30711757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 30711705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 36694280 - 36694332
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 36710381 - 36710433
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36710433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 17661851 - 17661902
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 17661902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 17662279 - 17662224
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcct 294  Q
    |||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcct 17662224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 1841888 - 1841838
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  1841888 taggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattg 1841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 24009575 - 24009625
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 24009625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 26024830 - 26024764
Alignment:
Q  230 tttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||| | ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  26024830 tttctttatgggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 26024764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 34464449 - 34464499
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 34464499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 35473629 - 35473687
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgt 35473687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 37578190 - 37578248
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  37578190 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 37578248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 43759252 - 43759194
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||    
T  43759252 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgt 43759194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 6367991 - 6367934
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 6367934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 13300331 - 13300282
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggt 13300282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 25647883 - 25647940
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 25647940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 5734008 - 5734060
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt 5734060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 34464879 - 34464827
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 34464827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 34850493 - 34850437
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgt 34850437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 35152341 - 35152393
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  35152341 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 35152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 37578621 - 37578569
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 291  Q
    |||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtt 37578569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 40210796 - 40210748
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggt 40210748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 40772507 - 40772563
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgt 40772563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 41098731 - 41098783
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggt 41098783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 183622 - 183563
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatca-ggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||||||||||| |||||    
T  183622 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgt 183563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 40435348 - 40435395
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40435395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 48692441 - 48692394
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||    
T  48692441 gcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaattg 48692394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 14879386 - 14879336
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggt 14879336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 19322890 - 19322944
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||||||||||||| || |||| | |||||||||||||||| ||||    
T  19322890 taggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttc 19322944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 35152757 - 35152711
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 35152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 46899061 - 46899111
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||  || ||| |||||||||||||||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggt 46899111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 7231678 - 7231629
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||||||| ||| |||||||||||||||    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattg 7231629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 13914066 - 13914115
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  13914066 taggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaatt 13914115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 17692610 - 17692557
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgt 17692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 19017628 - 19017677
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 19017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 40772888 - 40772831
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| ||||| ||| |||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgt 40772831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 42533022 - 42533071
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 42533071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 183221 - 183277
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||  ||| ||||||||||||||||||||| |||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgt 183277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 30711327 - 30711375
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 30711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 34849011 - 34849067
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgt 34849067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 36694678 - 36694626
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| ||| || ||||||||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggt 36694626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 36710779 - 36710727
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| ||| || ||||||||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggt 36710727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 42248475 - 42248523
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggt 42248523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 47999123 - 47999179
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| |||| |||||||||||||||| |||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgt 47999179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 7821382 - 7821331
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||| |||||||||||| ||| |  ||||||||||||||||||    
T  7821382 aggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggt 7821331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 26024422 - 26024473
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggt 26024473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 49723147 - 49723104
Alignment:
Q  247 atatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggt 49723104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 32917688 - 32917638
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||  ||| ||| | |||||||||||||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggt 32917638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 1103890 - 1103833
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||| ||||||||| ||| ||| |  |||||||||||||||||| |||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgt 1103833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 5735140 - 5735087
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||||||||||||  || ||| |||  ||||||||||||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttc 5735087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 7820953 - 7821010
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||| ||||| |||| || |||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgt 7821010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 13914494 - 13914445
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||| ||| || ||| ||||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggt 13914445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 19018059 - 19018007
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |  ||||||||||||||||||    
T  19018059 taggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggt 19018007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 48779548 - 48779500
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    |||||||||||||||||||||| ||| ||| ||| |||| |||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaatt 48779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 27397025 - 27396967
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 27396967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 28469438 - 28469380
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 28469380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 42731849 - 42731799
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattg 42731799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 45011034 - 45010980
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttc 45010980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 5457337 - 5457285
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 5457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 24389214 - 24389163
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 24389163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 27396628 - 27396679
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  27396628 aggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggt 27396679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 28469009 - 28469060
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 28469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 48788801 - 48788859
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||||||||||| |||||    
T  48788801 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgt 48788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 2640177 - 2640234
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||  ||| ||||||||||||||||||||| |||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgt 2640234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 6571012 - 6571069
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 6571069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 17102019 - 17102076
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 17102076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 19204488 - 19204545
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgt 19204545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 23181421 - 23181372
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggt 23181372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 10935794 - 10935850
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 10935850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 17102419 - 17102367
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  17102419 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 17102367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 6253472 - 6253527
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 6253527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 6253869 - 6253818
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 6253818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 10936223 - 10936172
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 10936172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 32053142 - 32053189
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 286  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaat 32053189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 42020022 - 42019971
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcct 294  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcct 42019971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 20426760 - 20426702
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||||  || ||| || |||||||||||||||||| |||||    
T  20426760 taggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgt 20426702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 28105499 - 28105557
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||| || |||||    
T  28105499 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgt 28105557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 40380112 - 40380062
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 40380062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 42362450 - 42362500
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggt 42362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 42731419 - 42731469
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||| ||||| ||| ||| |||||||||||||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggt 42731469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 22871706 - 22871649
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgt 22871649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 27992133 - 27992080
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 27992080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 29141605 - 29141556
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 32298776 - 32298833
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||| |||| |||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgt 32298833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 40379774 - 40379819
Alignment:
Q  245 aaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40379819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 42019598 - 42019647
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 42019647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 18670291 - 18670235
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||| |||| |||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgt 18670235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 24388821 - 24388869
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggt 24388869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 29144412 - 29144360
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||| ||  || ||| |||||||||||||||||||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 29144360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 37657265 - 37657217
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 37657217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 43123175 - 43123231
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||||||||| |||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgt 43123231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 32299132 - 32299077
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||| ||| ||| ||| ||| ||||||||||||||||| |||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgt 32299077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 2640607 - 2640557
Alignment:
Q  240 ggcttaaat-atgtatttcatcattgtaatcaggggtcgtttaaaaattgg 289  Q
    ||||||||| |||||||||||| || |||| ||||||||||||||||||||    
T  2640607 ggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattgg 2640557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 13386175 - 13386125
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggt 13386125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 17886920 - 17886870
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||| ||| |||| || |||||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattg 17886870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 27991738 - 27991787
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||| ||||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattg 27991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 47945356 - 47945409
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||| |||||||||||||||| ||| |||  ||| ||||||||||||||||||    
T  47945356 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttc 47945409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 47950786 - 47950839
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    ||||| |||||||||||||||| ||| |||  ||| ||||||||||||||||||    
T  47950786 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttc 47950839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 18086281 - 18086345
Alignment:
Q  232 tctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||| ||||||| |||  || ||| ||| ||| ||||||||||||||||| |||||    
T  18086281 tctttctaggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgt 18086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 22828247 - 22828196
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||| |||| ||||||| ||||||| ||||||| |||||||||||||    
T  22828247 taggcttaaa-atgtgtttcatccttgtaattaggggtcatttaaaaattggt 22828196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 30726189 - 30726131
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 30726131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 33647381 - 33647323
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  33647381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 33647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 3059685 - 3059628
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 3059628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 33517963 - 33517906
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 33517906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 11393233 - 11393182
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggt 11393182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 30337447 - 30337505
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 30337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 17734195 - 17734248
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttc 17734248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 21628142 - 21628085
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||||||||| |||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgt 21628085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 30804294 - 30804241
Alignment:
Q  235 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  30804294 ttctaggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 30804241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 33517537 - 33517590
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||| |||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgt 33517590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 681158 - 681106
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 681106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 8090357 - 8090305
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| |||| ||| ||| |||||||||||||||||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggt 8090305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 20651007 - 20651066
Alignment:
Q  237 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||| |||  || ||| |||| ||||||||||||||||||||||    
T  20651007 ctaggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgt 20651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 12081066 - 12081008
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||||| ||| ||| ||| |||||||||||||| || |||||    
T  12081066 taggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgt 12081008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 13379912 - 13379854
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgt 13379854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 26463177 - 26463235
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgt 26463235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 21627712 - 21627761
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattg 21627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 11434804 - 11434852
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 11434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 30337846 - 30337790
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgt 30337790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 679865 - 679916
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| ||| | |||||||||||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggt 679916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 12080638 - 12080684
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||| ||||||||||| ||| ||| |||||||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattg 12080684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 15115339 - 15115389
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| || | ||||||||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggt 15115389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 15116660 - 15116610
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||| |||||||||||| || ||| ||| |||||||||||||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt 15116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 22617886 - 22617932
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattgg 289  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgg 22617932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 12408601 - 12408549
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||||| ||  ||| |||||| |||||||| |||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggt 12408549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 26464627 - 26464571
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||  || ||| ||||||| |||||||| |||| |||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgt 26464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 6508 - 6451
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 6451  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 3555249 - 3555300
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 3555300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 11163454 - 11163395
Alignment:
Q  237 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  11163454 ctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 11163395  T

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Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 34447812 - 34447863
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggt 34447863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 36755517 - 36755466
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36755466  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 45556476 - 45556425
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggt 45556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 39423945 - 39423895
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 39423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 2318939 - 2318886
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||||||| ||  ||| |||||||||||||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttc 2318886  T

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Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 15848087 - 15848144
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||| |||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 15848144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 15848518 - 15848465
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 291  Q
    |||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||    
T  15848518 taggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtt 15848465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 16099453 - 16099396
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 16099396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 36382556 - 36382499
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 36382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 37895346 - 37895403
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 37895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 6657874 - 6657934
Alignment:
Q  236 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| |||  |||||||||||||||||||| |||||    
T  6657874 tctaggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgt 6657934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 10713151 - 10713095
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| | |||||||||||||||||||| ||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgt 10713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 6588686 - 6588733
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 6588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 36755094 - 36755145
Alignment:
Q  241 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 292  Q
    |||||||||||||||||||| || |||| || ||||||||||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggttc 36755145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 25231284 - 25231226
Alignment:
Q  232 tctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||| ||||||||||||||||||| |||  || ||| |||||||||||||||||||||    
T  25231284 tctttataggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 39423515 - 39423565
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||| |||||||||| ||||||| | |||||||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggt 39423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 44045432 - 44045374
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  44045432 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgt 44045374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 44713799 - 44713845
Alignment:
Q  244 taaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggt 44713845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 34448226 - 34448173
Alignment:
Q  237 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||| |||||||||||| ||| ||| |||||| ||||||||||||||    
T  34448226 ctaggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggt 34448173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 39498317 - 39498366
Alignment:
Q  247 atatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgt 39498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 45556111 - 45556168
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| ||| ||| ||| |||| |||||||||||||||| |||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgt 45556168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 6658275 - 6658219
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| || |||||||||||||||||| |||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgt 6658219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 21370630 - 21370582
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||| ||||||| |  ||||||||||||||||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattg 21370582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 25230102 - 25230158
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgt 25230158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 36382159 - 36382211
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||| ||||||||||||| ||| ||| |||| ||||||||||||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggt 36382211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 36480144 - 36480096
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 36480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 39498709 - 39498657
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  39498709 taggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 39498657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 6307145 - 6307096
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  6307145 ggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggt 6307096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 9076495 - 9076445
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggt 9076445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 30729621 - 30729671
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||||| ||| ||| ||  |||||||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggt 30729671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 37895772 - 37895722
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcc 293  Q
    |||||||||||||||||| ||| ||| | |||||||||||||| |||||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcc 37895722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 44714190 - 44714133
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||| ||||||| ||| ||| |||||||||||||||||| || |||||    
T  44714190 taggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgt 44714133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 13692637 - 13692592
Alignment:
Q  251 gtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 13692592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 36479719 - 36479768
Alignment:
Q  242 cttaaatatgtatttcatcatt-gtaatcaggggtcgtttaaaaattggt 290  Q
    ||||||||||||||||||| || | ||| |||||||||||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggt 36479768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 44044113 - 44044170
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||||||| |||  || ||| |||||| |||||||||||||| |||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgt 44044170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 10712725 - 10712773
Alignment:
Q  242 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    ||||| ||||||||||||| ||| ||| |||| ||||||||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggt 10712773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 11163054 - 11163110
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||| ||| ||| |  |||||||||||||||||| |||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgt 11163110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 16099055 - 16099111
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||| ||  ||| ||| ||||||| ||||||||||||| |||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgt 16099111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 14427 - 14476
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 287  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  14427 taggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaatt 14476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 14818 - 14768
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggt 14768  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 68965 - 69021
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| |||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgt 69021  T

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Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 69393 - 69337
Alignment:
Q  240 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||||| ||| ||| ||  ||||||||||||||||| |||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgt 69337  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 2170 - 2114
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctg 295  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctg 2114  T

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Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 1767 - 1825
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||| |||||||||| |||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgt 1825  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 37992 - 37941
Alignment:
Q  239 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 290  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 37941  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 139670 - 139728
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  139670 taggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 139728  T

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Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 140066 - 140013
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    |||||||||||||| ||| ||| ||| |||||| |||||||||||||| |||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgt 140013  T

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Target: scaffold0775 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 4960 - 5010
Alignment:
Q  238 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||||  |  ||| |||||||||||||||||||    
T  4960 taggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattg 5010  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 19860 - 19913
Alignment:
Q  243 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 296  Q
    ||||||||||||||| || ||| ||| | ||||||||||||||||||| |||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgt 19913  T

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