View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1351R-Insertion-9 (Length: 717)

Name: NF1351R-Insertion-9
Description: NF1351R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1351R-Insertion-9
NF1351R-Insertion-9
[»] chr6 (34 HSPs)
chr6 (9-717)||(10349660-10350390)
chr6 (494-596)||(32216941-32217044)
chr6 (478-559)||(20757489-20757571)
chr6 (479-539)||(3816703-3816764)
chr6 (502-559)||(22495938-22495995)
chr6 (502-554)||(12292942-12292994)
chr6 (503-545)||(7322013-7322055)
chr6 (502-596)||(9222526-9222623)
chr6 (502-559)||(1227756-1227813)
chr6 (502-559)||(10546101-10546158)
chr6 (502-559)||(13729175-13729232)
chr6 (502-559)||(17158352-17158409)
chr6 (502-559)||(21544210-21544267)
chr6 (502-559)||(26475842-26475899)
chr6 (502-559)||(26882156-26882213)
chr6 (480-544)||(33200009-33200074)
chr6 (502-559)||(34414509-34414566)
chr6 (502-554)||(9234924-9234976)
chr6 (485-540)||(334910-334965)
chr6 (502-545)||(3108734-3108777)
chr6 (502-545)||(16119773-16119816)
chr6 (496-543)||(29942599-29942646)
chr6 (508-559)||(32603723-32603773)
chr6 (487-545)||(686544-686602)
chr6 (478-539)||(9044646-9044708)
chr6 (641-679)||(11197661-11197699)
chr6 (514-559)||(2270544-2270589)
chr6 (502-559)||(8237718-8237775)
chr6 (502-559)||(11107771-11107828)
chr6 (479-539)||(12655158-12655219)
chr6 (502-559)||(16659701-16659758)
chr6 (508-545)||(18592096-18592133)
chr6 (502-559)||(22362698-22362755)
chr6 (648-681)||(33200096-33200129)
[»] chr8 (34 HSPs)
chr8 (476-559)||(9235340-9235423)
chr8 (502-559)||(32684801-32684858)
chr8 (490-559)||(34227394-34227463)
chr8 (502-559)||(38703836-38703893)
chr8 (495-559)||(9305645-9305709)
chr8 (508-559)||(2873534-2873585)
chr8 (502-545)||(24331581-24331624)
chr8 (508-559)||(29346090-29346141)
chr8 (508-559)||(37545130-37545181)
chr8 (502-545)||(41509634-41509677)
chr8 (478-539)||(9235534-9235596)
chr8 (487-545)||(29211934-29211992)
chr8 (502-559)||(5566722-5566779)
chr8 (502-559)||(11830255-11830312)
chr8 (639-683)||(11908399-11908444)
chr8 (502-559)||(12478653-12478710)
chr8 (502-559)||(23389098-23389155)
chr8 (502-559)||(27637307-27637364)
chr8 (502-559)||(30872634-30872691)
chr8 (502-559)||(32393390-32393447)
chr8 (613-677)||(13085173-13085237)
chr8 (503-559)||(15568942-15568998)
chr8 (159-191)||(21600515-21600547)
chr8 (502-598)||(24768618-24768717)
chr8 (502-545)||(5642788-5642831)
chr8 (502-545)||(5644729-5644772)
chr8 (502-545)||(13558579-13558622)
chr8 (502-545)||(13572619-13572662)
chr8 (508-596)||(30221856-30221947)
chr8 (502-545)||(38711875-38711918)
chr8 (479-540)||(13980022-13980084)
chr8 (508-545)||(8442170-8442207)
chr8 (490-559)||(23288916-23288985)
chr8 (495-539)||(35839611-35839656)
[»] chr3 (42 HSPs)
chr3 (486-559)||(17030592-17030665)
chr3 (479-559)||(25158845-25158925)
chr3 (260-339)||(46848402-46848480)
chr3 (487-601)||(7308106-7308222)
chr3 (194-336)||(30843766-30843911)
chr3 (479-559)||(25124995-25125075)
chr3 (192-335)||(621819-621963)
chr3 (502-559)||(13041602-13041659)
chr3 (502-559)||(13049679-13049736)
chr3 (502-559)||(52839538-52839595)
chr3 (192-282)||(12832091-12832185)
chr3 (478-545)||(18359444-18359512)
chr3 (502-545)||(13439817-13439860)
chr3 (502-545)||(19111193-19111236)
chr3 (502-545)||(22817961-22818004)
chr3 (502-559)||(300247-300304)
chr3 (502-559)||(5572192-5572249)
chr3 (502-559)||(14155015-14155072)
chr3 (502-559)||(26770159-26770216)
chr3 (508-545)||(28735528-28735565)
chr3 (508-545)||(31073910-31073947)
chr3 (502-559)||(31293691-31293748)
chr3 (193-241)||(23195561-23195609)
chr3 (494-548)||(1347661-1347716)
chr3 (495-541)||(14004303-14004350)
chr3 (475-522)||(18359283-18359330)
chr3 (502-598)||(48689184-48689283)
chr3 (502-601)||(2985691-2985793)
chr3 (487-545)||(3505253-3505311)
chr3 (487-540)||(5303696-5303750)
chr3 (476-522)||(27989272-27989318)
chr3 (260-302)||(31198106-31198147)
chr3 (70-110)||(284683-284724)
chr3 (489-522)||(5117854-5117887)
chr3 (494-559)||(14004503-14004568)
chr3 (502-559)||(14870169-14870226)
chr3 (502-559)||(16897327-16897384)
chr3 (261-342)||(21568294-21568374)
chr3 (634-675)||(23070001-23070041)
chr3 (502-559)||(32721746-32721803)
chr3 (502-559)||(38703223-38703280)
chr3 (502-559)||(45151703-45151760)
[»] chr7 (53 HSPs)
chr7 (479-545)||(10931948-10932014)
chr7 (488-597)||(15011865-15011978)
chr7 (480-559)||(1853159-1853238)
chr7 (480-554)||(27484813-27484887)
chr7 (476-543)||(9689499-9689566)
chr7 (502-559)||(2300901-2300958)
chr7 (487-559)||(2936318-2936391)
chr7 (502-559)||(3401881-3401938)
chr7 (502-559)||(5864684-5864741)
chr7 (499-548)||(15635163-15635212)
chr7 (502-559)||(17155687-17155744)
chr7 (502-559)||(26254796-26254853)
chr7 (502-559)||(32946365-32946422)
chr7 (479-559)||(3092455-3092535)
chr7 (503-559)||(21022597-21022653)
chr7 (508-559)||(13263954-13264005)
chr7 (502-545)||(30632077-30632120)
chr7 (502-601)||(31749399-31749501)
chr7 (502-545)||(36374225-36374268)
chr7 (261-339)||(18942733-18942810)
chr7 (487-545)||(33441117-33441175)
chr7 (490-559)||(442602-442671)
chr7 (502-559)||(2241094-2241151)
chr7 (502-559)||(31307930-31307987)
chr7 (502-547)||(38130914-38130959)
chr7 (502-559)||(38192802-38192859)
chr7 (502-559)||(43707165-43707222)
chr7 (487-559)||(45687820-45687893)
chr7 (497-545)||(11576823-11576871)
chr7 (502-554)||(20055064-20055116)
chr7 (502-596)||(35158262-35158358)
chr7 (613-681)||(43393710-43393778)
chr7 (508-559)||(2240660-2240711)
chr7 (487-554)||(8391027-8391094)
chr7 (502-545)||(15721009-15721052)
chr7 (499-554)||(25571180-25571235)
chr7 (502-601)||(31863904-31864006)
chr7 (490-545)||(37913906-37913961)
chr7 (194-252)||(1344571-1344629)
chr7 (476-522)||(25898678-25898724)
chr7 (68-110)||(39608658-39608700)
chr7 (487-539)||(1853345-1853398)
chr7 (613-681)||(1853392-1853461)
chr7 (502-559)||(2514151-2514208)
chr7 (490-559)||(12005502-12005571)
chr7 (502-559)||(20164343-20164400)
chr7 (495-539)||(21443938-21443983)
chr7 (502-559)||(21522008-21522065)
chr7 (487-535)||(24812983-24813032)
chr7 (490-559)||(28696471-28696540)
chr7 (496-545)||(34436689-34436738)
chr7 (502-559)||(44448400-44448457)
chr7 (490-559)||(47370220-47370289)
[»] chr5 (42 HSPs)
chr5 (487-559)||(31567697-31567769)
chr5 (476-559)||(20355068-20355151)
chr5 (487-554)||(21144191-21144258)
chr5 (495-595)||(35687379-35687481)
chr5 (502-559)||(4414006-4414063)
chr5 (502-559)||(7577931-7577988)
chr5 (502-559)||(11721345-11721402)
chr5 (260-341)||(16127044-16127124)
chr5 (502-559)||(25233865-25233922)
chr5 (502-559)||(25298025-25298082)
chr5 (511-598)||(13153689-13153779)
chr5 (502-545)||(22756317-22756360)
chr5 (260-339)||(23159025-23159103)
chr5 (508-559)||(23159552-23159603)
chr5 (502-545)||(25962881-25962924)
chr5 (479-539)||(37869557-37869619)
chr5 (502-544)||(41123398-41123440)
chr5 (502-559)||(8855477-8855534)
chr5 (502-559)||(12148147-12148204)
chr5 (508-545)||(26243186-26243223)
chr5 (502-559)||(31920139-31920196)
chr5 (502-559)||(38874576-38874633)
chr5 (157-189)||(26675115-26675147)
chr5 (157-189)||(26946723-26946755)
chr5 (503-559)||(31312692-31312748)
chr5 (495-539)||(42097732-42097776)
chr5 (502-545)||(28796426-28796469)
chr5 (502-545)||(37217456-37217499)
chr5 (502-545)||(40765463-40765506)
chr5 (261-335)||(29686426-29686499)
chr5 (480-545)||(38083055-38083121)
chr5 (508-545)||(4561856-4561893)
chr5 (502-559)||(17885942-17885999)
chr5 (502-559)||(21039944-21040001)
chr5 (479-539)||(21144015-21144076)
chr5 (502-559)||(25088787-25088844)
chr5 (502-559)||(25146756-25146813)
chr5 (502-539)||(25233707-25233744)
chr5 (502-539)||(25297867-25297904)
chr5 (495-539)||(26243358-26243403)
chr5 (502-559)||(34309549-34309606)
chr5 (495-539)||(37217378-37217423)
[»] chr2 (39 HSPs)
chr2 (494-559)||(25103974-25104039)
chr2 (487-559)||(42223089-42223161)
chr2 (502-559)||(7318171-7318228)
chr2 (502-598)||(39373073-39373173)
chr2 (502-554)||(33218569-33218621)
chr2 (502-554)||(38127842-38127894)
chr2 (485-559)||(35791057-35791132)
chr2 (485-559)||(17188859-17188933)
chr2 (502-596)||(19253479-19253576)
chr2 (495-545)||(26498763-26498813)
chr2 (477-559)||(41906045-41906127)
chr2 (502-559)||(776513-776570)
chr2 (502-559)||(1975721-1975778)
chr2 (502-559)||(15543952-15544009)
chr2 (502-559)||(18048896-18048953)
chr2 (502-559)||(18755263-18755320)
chr2 (502-559)||(18756588-18756645)
chr2 (502-559)||(29949635-29949692)
chr2 (502-559)||(34831571-34831628)
chr2 (502-559)||(38949936-38949993)
chr2 (502-559)||(42794091-42794148)
chr2 (502-559)||(43830741-43830798)
chr2 (487-538)||(11478052-11478104)
chr2 (502-554)||(36525355-36525407)
chr2 (502-545)||(2526431-2526474)
chr2 (502-545)||(7008026-7008069)
chr2 (493-559)||(15580606-15580673)
chr2 (508-559)||(16204546-16204597)
chr2 (478-540)||(16590662-16590725)
chr2 (508-559)||(33315227-33315278)
chr2 (508-559)||(41100778-41100829)
chr2 (288-334)||(21603441-21603487)
chr2 (487-545)||(30497215-30497273)
chr2 (502-559)||(874433-874490)
chr2 (502-559)||(10071369-10071426)
chr2 (485-545)||(16590510-16590571)
chr2 (508-545)||(19272747-19272784)
chr2 (495-539)||(33218397-33218442)
chr2 (502-559)||(39752099-39752156)
[»] chr4 (46 HSPs)
chr4 (479-547)||(8809935-8810003)
chr4 (476-543)||(13555876-13555943)
chr4 (260-335)||(17753258-17753333)
chr4 (487-554)||(18165133-18165200)
chr4 (260-338)||(4161619-4161696)
chr4 (502-559)||(3652350-3652407)
chr4 (502-559)||(17696303-17696360)
chr4 (502-559)||(30918997-30919054)
chr4 (476-545)||(42161269-42161338)
chr4 (502-559)||(50773368-50773425)
chr4 (508-596)||(39133170-39133261)
chr4 (260-339)||(8170993-8171071)
chr4 (487-545)||(9780540-9780599)
chr4 (260-339)||(12034378-12034456)
chr4 (479-545)||(16734136-16734203)
chr4 (479-545)||(5283657-5283723)
chr4 (649-683)||(21745031-21745065)
chr4 (502-548)||(30409355-30409401)
chr4 (502-596)||(42056058-42056155)
chr4 (502-559)||(7913351-7913408)
chr4 (476-540)||(8810124-8810189)
chr4 (502-559)||(21507905-21507962)
chr4 (502-559)||(22854043-22854100)
chr4 (490-559)||(25244598-25244667)
chr4 (508-545)||(31226434-31226471)
chr4 (502-559)||(32682410-32682467)
chr4 (502-559)||(49166725-49166782)
chr4 (508-545)||(50719675-50719712)
chr4 (260-332)||(17381582-17381653)
chr4 (260-339)||(11840066-11840144)
chr4 (490-545)||(12388152-12388207)
chr4 (479-545)||(23091869-23091936)
chr4 (488-554)||(49277864-49277931)
chr4 (502-544)||(24675359-24675401)
chr4 (502-559)||(29104239-29104297)
chr4 (260-338)||(35255495-35255572)
chr4 (502-544)||(41325466-41325508)
chr4 (479-540)||(49533278-49533340)
chr4 (260-337)||(971844-971919)
chr4 (508-545)||(5514608-5514645)
chr4 (502-559)||(14121485-14121542)
chr4 (502-559)||(18510062-18510119)
chr4 (502-559)||(23184836-23184892)
chr4 (502-539)||(36395479-36395516)
chr4 (502-559)||(49296240-49296297)
chr4 (508-545)||(53658818-53658855)
[»] chr1 (33 HSPs)
chr1 (477-559)||(33864105-33864188)
chr1 (477-559)||(33916734-33916817)
chr1 (487-545)||(1701173-1701231)
chr1 (631-681)||(33465251-33465301)
chr1 (502-559)||(23161905-23161962)
chr1 (502-559)||(26190810-26190867)
chr1 (478-545)||(9240522-9240590)
chr1 (487-545)||(44228339-44228398)
chr1 (479-545)||(5469347-5469413)
chr1 (502-544)||(5932041-5932083)
chr1 (502-559)||(9209654-9209711)
chr1 (502-559)||(14909997-14910054)
chr1 (479-535)||(33864272-33864329)
chr1 (479-535)||(33916593-33916650)
chr1 (261-338)||(38267444-38267520)
chr1 (502-559)||(47231196-47231253)
chr1 (485-540)||(7261533-7261589)
chr1 (503-559)||(20158888-20158944)
chr1 (476-539)||(22315199-22315263)
chr1 (502-554)||(26399100-26399152)
chr1 (487-559)||(30147130-30147202)
chr1 (502-545)||(5457160-5457203)
chr1 (502-545)||(27665996-27666039)
chr1 (260-339)||(35684921-35684999)
chr1 (192-255)||(45679587-45679650)
chr1 (633-680)||(7261604-7261653)
chr1 (260-318)||(10018720-10018777)
chr1 (479-536)||(44078748-44078806)
chr1 (633-683)||(44228558-44228608)
chr1 (502-559)||(21770834-21770891)
chr1 (502-559)||(22387414-22387471)
chr1 (492-545)||(25060042-25060095)
chr1 (502-559)||(41189916-41189973)
[»] scaffold0004 (2 HSPs)
scaffold0004 (502-559)||(212592-212649)
scaffold0004 (476-554)||(82202-82279)
[»] scaffold0002 (2 HSPs)
scaffold0002 (502-559)||(332143-332200)
scaffold0002 (508-559)||(432632-432683)
[»] scaffold0142 (1 HSPs)
scaffold0142 (485-545)||(35002-35062)
[»] scaffold0430 (1 HSPs)
scaffold0430 (494-559)||(12722-12787)
[»] scaffold0258 (1 HSPs)
scaffold0258 (510-559)||(18839-18888)
[»] scaffold0022 (1 HSPs)
scaffold0022 (502-559)||(63270-63327)
[»] scaffold0003 (1 HSPs)
scaffold0003 (478-544)||(316488-316554)
[»] scaffold0329 (1 HSPs)
scaffold0329 (260-341)||(6473-6553)
[»] scaffold0188 (1 HSPs)
scaffold0188 (648-681)||(13414-13447)
[»] scaffold0121 (1 HSPs)
scaffold0121 (502-559)||(12547-12604)


Alignment Details
Target: chr6 (Bit Score: 492; Significance: 0; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 9 - 717
Target Start/End: Original strand, 10349660 - 10350390
Alignment:
Q  9 tttcattccattcataattttcttattctcnnnnnnngcttaatttaactccatgttctatatttttt--aagataataatcattttcgtccatgaatgt 106  Q
    |||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||  ||||||||||||||||||||      ||||    
T  10349660 tttcattccattcacaattttcttattctctttttttgcttaatttaactccatgttctatattttttttaagataataatcattttcgt------atgt 10349753  T
Q  107 gtaacaagtcgtatccaaatttcaaaatagt---------------tcgttgatcaaaatagtattaatgttaaaatatttcattaatattgt------- 184  Q
    ||||||||| ||||| |||||||||||||||               ||||| |||||||||||| | ||||||| ||||||||||||||||||           
T  10349754 gtaacaagtagtatcgaaatttcaaaatagtccttcattgtgcacttcgttaatcaaaatagtactgatgttaatatatttcattaatattgtaatattg 10349853  T
Q  185 -catatttagttattgtgagtatcgagagattgttttagcggtagagactattttgaccaatagagtgcacataggctattttgaaattttgatacattt 283  Q
     |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10349854 tcatatttagttattgcaagtatagagagattgttttagcggtagagactattttgaccaacagagtgcacataggctattttgaaattttgatacattt 10349953  T
Q  284 gagtgactattgtgactactgatcacatattcagggactaaagtgactattaccccatannnnnnnataagtcacacacgccgtctaatataattattaa 383  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  10349954 gagtgactattgtgattactgatcacatattctgggactaaagtgactattaccccatatttttttataagtcacacacgccgtctaatataattattaa 10350053  T
Q  384 tccgtgctcagggtcaccactcattgtagaagtataatgggttaatatatgtttaccctgtagta---gcggcttctgggtcgtttctcgtttacgtaaa 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  10350054 tccgtgctcagggtcaccactcattgtagaagtataatgggttaatatatgtttaccctgtagtattagcggcttctgggtcgtttctcgtttacgtaaa 10350153  T
Q  481 aaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctatatatggcgagggaaatcg 580  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10350154 aaacaattgtttagatttcaaccctgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctgtatatggcgggggaaatcg 10350253  T
Q  581 aaattcgctcaaattacagggctacagtaacttaaacaaaatttttgacagaggtaaactagaaacagctaatattacatggggtaaacatatattaacc 680  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10350254 aaattcgctcaaattacaaggctacagtaacttaaacaaaatttttgacaagggtaaactagaaacagctaatattacatggggtaaacatatattaacc 10350353  T
Q  681 caagtataatttatatatacatatatttgagtattga 717  Q
    |||||||||||||||||||||||||||||||||||||    
T  10350354 caagtataatttatatatacatatatttgagtattga 10350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 494 - 596
Target Start/End: Complemental strand, 32217044 - 32216941
Alignment:
Q  494 gatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggcgagggaaatcgaaattcgctcaa 592  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||||||||| || ||||| ||||  | ||||| |  || ||||||||||| ||||||    
T  32217044 gatttcatccttgtaatttgaagagttttggttttggaccttcatgaattttgactgtacaaaatcaaagatatgacagggtaaatcgaaatttgctcaa 32216945  T
Q  593 atta 596  Q
    ||||    
T  32216944 atta 32216941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 20757489 - 20757571
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||| ||||||||||||| ||||| || |||||||||||||  |||||||| ||||| |||||||||||| ||||| ||||    
T  20757489 aaaaaaaaattgtttagattccaaccctgtaatttgaagattcagtggttttgaaccttaatgaattttaaccgtacaaaatc 20757571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 3816764 - 3816703
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatg 539  Q
    ||||| ||||||||||||||||||| || ||||||||||||| |||||||| ||||||||||    
T  3816764 aaaaaaaattgtttagatttcaaccctgtaatttgaagattctttggtttttgaccttcatg 3816703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 22495995 - 22495938
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||| |||||||| ||||    
T  22495995 ccttgtaatttgaagatttttggttttggaccttcaagaattttgacggtacaaaatc 22495938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 12292942 - 12292994
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || |||||    
T  12292942 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtaca 12292994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 545
Target Start/End: Complemental strand, 7322055 - 7322013
Alignment:
Q  503 cttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  7322055 cttgtaatttgaagatttttggttttggaccttcatgaatttt 7322013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 596
Target Start/End: Complemental strand, 9222623 - 9222526
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggcgaggg--aaatcgaaattcgctcaaatta 596  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| |||| || |||||||| |||  ||| |||||||  |||||||||    
T  9222623 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcggggggtaaaccgaaatttcctcaaatta 9222526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 1227756 - 1227813
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  1227756 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 1227813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 10546158 - 10546101
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || |||||||||| ||||||||||||||||| ||||| ||||    
T  10546158 ccttgtaatttgaagttttttggttttggtccttcatgaattttaactgtacaaaatc 10546101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 13729232 - 13729175
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||| || ||||| ||||    
T  13729232 ccttgtaatttgaagatttttggttttggaccttcatgtattttgacagtacaaaatc 13729175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 17158409 - 17158352
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| || ||||| ||||    
T  17158409 ccttgtaatttgaagatttttggttttggacctccatgaattttgactgtacaaaatc 17158352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 21544210 - 21544267
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  21544210 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 21544267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 26475842 - 26475899
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  26475842 ccttgtaatttgaatatttttggttttggaccttcatgaattttgacagtacaaaatc 26475899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 26882156 - 26882213
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| || ||||| ||||    
T  26882156 ccttgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatc 26882213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 544
Target Start/End: Complemental strand, 33200074 - 33200009
Alignment:
Q  480 aaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattt 544  Q
    |||| ||||||||||||| ||||| || ||||||||||||| ||| ||||||||||| ||||||||    
T  33200074 aaaaaaattgtttagattacaaccctgtaatttgaagattctttgattttggacctttatgaattt 33200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 34414566 - 34414509
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| || ||||||||| || ||||||||||||||||||||||||| ||||| ||||    
T  34414566 ccttgtaacttgaagattttttgttttggaccttcatgaattttaactgtacaaaatc 34414509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 9234924 - 9234976
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| |||||||||||| |||||||||||||||||| |||||| || |||||    
T  9234924 ccttgtaatttgaagatttttggttttggaccttcataaattttgactgtaca 9234976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 540
Target Start/End: Original strand, 334910 - 334965
Alignment:
Q  485 aattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatga 540  Q
    |||||||||||||| ||||||| |||||||||||| || |||| |||| |||||||    
T  334910 aattgtttagattttaaccttgtaatttgaagatttttagtttaggacattcatga 334965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 3108777 - 3108734
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||    
T  3108777 ccttgtaatttgaagatttttggttttggaccttcattaatttt 3108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 16119773 - 16119816
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||    
T  16119773 ccttgtaatttgaagatttttggatttggaccttcatgaatttt 16119816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 543
Target Start/End: Original strand, 29942599 - 29942646
Alignment:
Q  496 tttcaaccttgaaatttgaagattcttggttttggaccttcatgaatt 543  Q
    ||||| ||||| |||||||||||| ||| |||||||||||||||||||    
T  29942599 tttcatccttgtaatttgaagatttttgattttggaccttcatgaatt 29942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 32603773 - 32603723
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  32603773 aatttgaagatt-ttggttttggaccttcatgaattttgactgtacaaaatc 32603723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 545
Target Start/End: Complemental strand, 686602 - 686544
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||| ||||||  ||||| |||||||||||| ||| |||||||||||||| ||||||    
T  686602 ttgtttggatttcgtccttgtaatttgaagatttttgattttggaccttcataaatttt 686544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 539
Target Start/End: Complemental strand, 9044708 - 9044646
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaagatt-cttggttttggaccttcatg 539  Q
    |||||| ||||||||| ||| |||||||| ||||||||||||  ||| |||||||||||||||    
T  9044708 aaaaaaaaattgtttaaattccaaccttgtaatttgaagattatttgattttggaccttcatg 9044646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 641 - 679
Target Start/End: Complemental strand, 11197699 - 11197661
Alignment:
Q  641 agaaacagctaatattacatggggtaaacatatattaac 679  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  11197699 agaaaccgctaatattacatgaggtaaacatatattaac 11197661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 559
Target Start/End: Original strand, 2270544 - 2270589
Alignment:
Q  514 aagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||    
T  2270544 aagatttttggttttggaccttcatgaattttgactgtacaaaatc 2270589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 8237718 - 8237775
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || |||||||||| |||||||||||||| || ||||| ||||    
T  8237718 ccttgtaatttgaagttttttggttttggtccttcatgaattttgactgtacaaaatc 8237775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 11107828 - 11107771
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  | |||||||| |||||||||||||||| ||||| ||||    
T  11107828 ccttgtaatttgaagatttctagttttggaacttcatgaattttaacagtacaaaatc 11107771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 539
Target Start/End: Original strand, 12655158 - 12655219
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagatt-cttggttttggaccttcatg 539  Q
    ||||| |||||| |||||||||||  |||||||||||||||  |||||||| ||||||||||    
T  12655158 aaaaaaaattgtatagatttcaactgtgaaatttgaagattatttggttttagaccttcatg 12655219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 16659758 - 16659701
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||  ||||||||||||||||||||| || ||||| ||||    
T  16659758 ccttgtaatttgaagattttttattttggaccttcatgaattttgacagtacaaaatc 16659701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 545
Target Start/End: Original strand, 18592096 - 18592133
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  18592096 aatttgaagatttttggttttggaccttcatggatttt 18592133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 22362698 - 22362755
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||| |  |||||||||||||||||||||||| || ||||| ||||    
T  22362698 ccttgtaatttgaagacttatggttttggaccttcatgaattttgaccgtacaaaatc 22362755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 681
Target Start/End: Original strand, 33200096 - 33200129
Alignment:
Q  648 gctaatattacatggggtaaacatatattaaccc 681  Q
    |||||||||||||||||||||||| |||||||||    
T  33200096 gctaatattacatggggtaaacatgtattaaccc 33200129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 559
Target Start/End: Original strand, 9235340 - 9235423
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||| ||||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||| || ||||| ||||    
T  9235340 gtaaaaaaaaattgtttagatttcaaccatgtaatttgaagaattttggttttggaccttcatgaattttgactgtacaaaatc 9235423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 32684858 - 32684801
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  32684858 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 32684801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 559
Target Start/End: Original strand, 34227394 - 34227463
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||  ||||| |||||||||||| |||||||| |||||||||||||||| || ||||| ||||    
T  34227394 tttagatttcgtccttgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatc 34227463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 38703893 - 38703836
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  38703893 ccttgtaatttgaagatttttggttttggaccttcatgaatttttactgtacaaaatc 38703836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 559
Target Start/End: Complemental strand, 9305709 - 9305645
Alignment:
Q  495 atttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||| ||||| |||||||||||| ||||||||| ||||||||||||||| || ||||| ||||    
T  9305709 atttcatccttgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatc 9305645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 2873534 - 2873585
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  2873534 aatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 2873585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 24331624 - 24331581
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  24331624 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 24331581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 29346090 - 29346141
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  29346090 aatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 29346141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 37545181 - 37545130
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  37545181 aatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 37545130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 41509677 - 41509634
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  41509677 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 41509634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 539
Target Start/End: Complemental strand, 9235596 - 9235534
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||| ||||||||||||||||||| || |||||||||| || ||| |||||||||||||||    
T  9235596 aaaaaaaaattgtttagatttcaaccctgtaatttgaagattttttgattttggaccttcatg 9235534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 29211934 - 29211992
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||| || || ||||| ||||||||||||  ||||||||||||||||||||||||    
T  29211934 ttgtttagtttccatccttgtaatttgaagatttctggttttggaccttcatgaatttt 29211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 5566779 - 5566722
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| || ||||| ||||    
T  5566779 ccttgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatc 5566722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 11830255 - 11830312
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  11830255 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 11830312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 683
Target Start/End: Complemental strand, 11908444 - 11908399
Alignment:
Q  639 ctagaaacagctaatattacatgggg-taaacatatattaacccaa 683  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  11908444 ctagaaaccgctaatattacatgggggtaaacatatattaacccaa 11908399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 12478653 - 12478710
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  12478653 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 12478710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 23389098 - 23389155
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||||||||||| |||||| || ||||| ||||    
T  23389098 ccttgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaaatc 23389155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 27637364 - 27637307
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| || ||||| ||||    
T  27637364 ccttgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatc 27637307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 30872691 - 30872634
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  30872691 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 30872634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 32393390 - 32393447
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| || |||||||||||| |||||||||||| ||||| ||||    
T  32393390 ccttgtaatttgaagattttttgttttggacctttatgaattttaactgtacaaaatc 32393447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 677
Target Start/End: Complemental strand, 13085237 - 13085173
Alignment:
Q  613 taaacaaaatttttgacagaggtaaactagaaacagctaatattacatggggtaaacatatatta 677  Q
    |||||||| | ||| | ||| ||||||||||||| ||||||||||||||| | ||||||||||||    
T  13085237 taaacaaattattttaaagatgtaaactagaaactgctaatattacatggagaaaacatatatta 13085173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 15568998 - 15568942
Alignment:
Q  503 cttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||| |||||||||||| |||||||| |||||||||||| |||||| ||||| ||||    
T  15568998 cttgtaatttgaagatttttggttttagaccttcatgaaatttaacagtacaaaatc 15568942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 21600515 - 21600547
Alignment:
Q  159 atgttaaaatatttcattaatattgtcatattt 191  Q
    |||||||||||||||||||||||||||||||||    
T  21600515 atgttaaaatatttcattaatattgtcatattt 21600547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 598
Target Start/End: Original strand, 24768618 - 24768717
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggcgaggg--aaatcgaaattcgctcaaattaca 598  Q
    ||||| |||||||||||| ||||||||| ||||| ||||||||| || ||||| ||||  | ||||||| ||||  ||| ||||||| ||||||||||||    
T  24768618 ccttgtaatttgaagatttttggttttgaaccttaatgaattttgactgtacaaaatcgaagatatggcaaggggtaaaccgaaatttgctcaaattaca 24768717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 5642788 - 5642831
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||    
T  5642788 ccttgtaatttgaatatttttggttttggaccttcatgaatttt 5642831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 5644729 - 5644772
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||    
T  5644729 ccttgtaatttgaatatttttggttttggaccttcatgaatttt 5644772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 13558579 - 13558622
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||    
T  13558579 ccttgtaatttgaagatttttggttttgtaccttcatgaatttt 13558622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 13572619 - 13572662
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||    
T  13572619 ccttgtaatttaaagatttttggttttggaccttcatgaatttt 13572662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 30221856 - 30221947
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggc-gaggg-aaatcgaaattcgctcaaatta 596  Q
    ||||||||| || ||||||||| ||||||||||||||| || ||||| |||| || ||||||| ||||| |||||||||||  |||||||||    
T  30221856 aatttgaagttttttggttttgaaccttcatgaattttgaccgtacaaaatcgataatatggcagagggtaaatcgaaattttctcaaatta 30221947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 38711918 - 38711875
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||    
T  38711918 ccttgtaatttgaatatttttggttttggaccttcatgaatttt 38711875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 540
Target Start/End: Complemental strand, 13980084 - 13980022
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatga 540  Q
    ||||| |||||||||||||  |||| || ||||||||||||| ||| ||||||||||||||||    
T  13980084 aaaaaaaattgtttagattctaaccctgtaatttgaagattctttgattttggaccttcatga 13980022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 545
Target Start/End: Complemental strand, 8442207 - 8442170
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||||||| || |||||||||||||||||||||||||    
T  8442207 aatttgaagttttttggttttggaccttcatgaatttt 8442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 559
Target Start/End: Original strand, 23288916 - 23288985
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| | || |||||||||||| |||||||| || |||||||||| || || ||||| ||||    
T  23288916 tttagatttcaatcctgtaatttgaagatttttggttttagaacttcatgaatattgaccgtacaaaatc 23288985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 539
Target Start/End: Complemental strand, 35839656 - 35839611
Alignment:
Q  495 atttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  35839656 atttcatccttgaaatttgaagattttttggttttggaccttcatg 35839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 486 - 559
Target Start/End: Original strand, 17030592 - 17030665
Alignment:
Q  486 attgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  17030592 attgtttagattccaaccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 17030665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 559
Target Start/End: Original strand, 25158845 - 25158925
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||| ||||| || |||||||| |||||||||||||||| |||||||||||| || ||||| ||||    
T  25158845 aaaaaaaattgtttagattccaaccctgtaatttgaatattcttggttttggacattcatgaattttgactgtacaaaatc 25158925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 46848402 - 46848480
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    ||||||||||||||||||||||| |||  |||||| |||||||| || ||| |||||||||| |||||||||||||||||    
T  46848402 ctattttgaaattttgatacatt-gaggaactattttgactactcattacacattcagggaccaaagtgactattacccc 46848480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 601
Target Start/End: Original strand, 7308106 - 7308222
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggc--gagggaaatcgaaa 583  Q
    ||||||| ||| ||||| |||| |||||||||| ||||||||||||||||||||||||| || ||||| |||| || |||||||  | || ||| |||||    
T  7308106 ttgtttaaattccaaccctgaagtttgaagatt-ttggttttggaccttcatgaattttgacagtacaaaatcaatgatatggcagggggtaaaccgaaa 7308204  T
Q  584 ttcgctcaaattacaggg 601  Q
    ||| ||||||||||||||    
T  7308205 ttctctcaaattacaggg 7308222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 336
Target Start/End: Original strand, 30843766 - 30843911
Alignment:
Q  194 ttattgtgagtatcgagagattgttttagcggtagagactattttgaccaatagagtgcacat----aggctattttgaaattttgatacatttgagtga 289  Q
    |||||||||| || |||||||| ||||||||  || |||||||||||  || | ||||||||     || |||||||| ||||||||||||||  || ||    
T  30843766 ttattgtgagcattgagagattattttagcgtcagggactattttgattaacaaagtgcacaatcagagactattttggaattttgatacatta-agaga 30843864  T
Q  290 ctattgtgactactgatcacatattcagggactaaagtgactattac 336  Q
    |||||||||||||| || ||| ||||||| || ||||||||||||||    
T  30843865 ctattgtgactactcattacacattcaggaaccaaagtgactattac 30843911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 25125075 - 25124995
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||||||| || |  |||||||||||| |||||||| |||||||||||||||| || ||||| ||||    
T  25125075 aaaaaaaattgtttagatttcatccctataatttgaagatttttggtttttgaccttcatgaattttgactgtacaaaatc 25124995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 335
Target Start/End: Original strand, 621819 - 621963
Alignment:
Q  192 agttattgtgagtatcgagagattgttttagcggtagagactattttgaccaatagagtgcaca--tagg--ctattttgaaattttgatacatttgagt 287  Q
    ||||||||||||||| |||| ||| ||||| |   | ||||||||||||| || | ||||||||  ||||  |||||||||||||||||||||||   |     
T  621819 agttattgtgagtattgagatattattttaacatcaaagactattttgactaacaaagtgcacagttagggactattttgaaattttgatacatt---ga 621915  T
Q  288 gactattgtgactactgatcacatattcagggactaaagtgactatta 335  Q
    ||||||| |||||||| || ||| |||||| ||| |||||||||||||    
T  621916 gactattatgactactcattacacattcagagaccaaagtgactatta 621963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 13041659 - 13041602
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  13041659 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 13041602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 13049736 - 13049679
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  13049736 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 13049679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 52839595 - 52839538
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  52839595 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 52839538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 12832185 - 12832091
Alignment:
Q  192 agttattgtgagtatcgagagattgttttagcggtagagactattttgaccaatagagtgcaca--tagg--ctattttgaaattttgatacatt 282  Q
    ||||||||| ||||| |||||||| ||||||||  ||||||||||||||| || ||||||||||  ||||  ||||||| ||| |||||||||||    
T  12832185 agttattgttagtattgagagattattttagcgtaagagactattttgactaagagagtgcacaactagggactattttaaaactttgatacatt 12832091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 18359512 - 18359444
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaatttt 545  Q
    |||||| | |||||||||||||||||||| ||||| ||||||| |||| ||| ||||||||||||||||    
T  18359512 aaaaaaaatttgtttagatttcaaccttgtaatttaaagattctttggatttagaccttcatgaatttt 18359444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 13439860 - 13439817
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  13439860 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 13439817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 19111236 - 19111193
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  19111236 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 19111193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 22817961 - 22818004
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  22817961 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 22818004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 300247 - 300304
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  300247 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 300304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 5572249 - 5572192
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| || ||||| ||||    
T  5572249 ccttgtaatttgaagatttttgattttggaccttcatgaattttgacagtacaaaatc 5572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 14155072 - 14155015
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||    
T  14155072 ccttgtaatttgaagatttttgcctttggaccttcatgaattttaaccgtacaaaatc 14155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 26770216 - 26770159
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| || ||||| ||||    
T  26770216 ccttgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatc 26770159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 545
Target Start/End: Original strand, 28735528 - 28735565
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||||||||||||||||||||    
T  28735528 aatttgaagatttttggttttggaccttcatgaatttt 28735565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 545
Target Start/End: Complemental strand, 31073947 - 31073910
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||||||||||||||||||||    
T  31073947 aatttgaagatttttggttttggaccttcatgaatttt 31073910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 31293748 - 31293691
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  31293748 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 31293691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 23195609 - 23195561
Alignment:
Q  193 gttattgtgagtatcgagagattgttttagcggtagagactattttgac 241  Q
    |||||||||||||| |||||||| |||||||| || |||||||||||||    
T  23195609 gttattgtgagtattgagagattattttagcgctaaagactattttgac 23195561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 548
Target Start/End: Original strand, 1347661 - 1347716
Alignment:
Q  494 gatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattttaac 548  Q
    ||||||||||||| |||||||| |||| ||| |||||||||||| |||||||||||    
T  1347661 gatttcaaccttgtaatttgaatattctttgattttggaccttcgtgaattttaac 1347716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 14004303 - 14004350
Alignment:
Q  495 atttcaaccttgaaatttgaaga-ttcttggttttggaccttcatgaa 541  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||    
T  14004303 atttcatccttgaaatttgaagattttttggttttggaccttcatgaa 14004350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Original strand, 18359283 - 18359330
Alignment:
Q  475 cgtaaaaaacaattgtttagatttcaaccttgaaatttgaagattctt 522  Q
    ||||||||| ||||||||||||| ||||| || |||||||||||||||    
T  18359283 cgtaaaaaaaaattgtttagattccaaccctgtaatttgaagattctt 18359330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 598
Target Start/End: Original strand, 48689184 - 48689283
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggc-gaggg-aaatcgaaattcgctcaaattaca 598  Q
    ||||| ||||| |||||| ||||||||||||| |||| ||||||||| ||||| ||||  | ||||||| ||||| ||||||||| | ||||||||||||    
T  48689184 ccttgtaatttaaagatttttggttttggaccgtcataaattttaaccgtacaaaatcgaagatatggcagagggtaaatcgaaacttgctcaaattaca 48689283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 601
Target Start/End: Complemental strand, 2985793 - 2985691
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggc-gagg-gaaatcgaaattcgctcaaattaca 598  Q
    ||||| ||||||||| || |||||||| |||||||||||||||| || ||||| |||| || ||||||| ||||  ||| ||||||| ||||||||| ||    
T  2985793 ccttgtaatttgaagttttttggttttagaccttcatgaattttgactgtacaaaatcgatgatatggcagaggataaaccgaaatttgctcaaattgca 2985694  T
Q  599 ggg 601  Q
    |||    
T  2985693 ggg 2985691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 545
Target Start/End: Complemental strand, 3505311 - 3505253
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||| ||||||  ||||| ||||| |||||| ||||||||||||||| |||||||||    
T  3505311 ttgtttggatttcgtccttgtaatttaaagatttttggttttggacctttatgaatttt 3505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 5303750 - 5303696
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatga 540  Q
    ||||||||||| ||||| || ||||||||||||| |||||||| |||||||||||    
T  5303750 ttgtttagattccaaccctgtaatttgaagattctttggttttagaccttcatga 5303696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 522
Target Start/End: Complemental strand, 27989318 - 27989272
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattctt 522  Q
    |||||||| ||  |||||||||||||||||| |||||||||||||||    
T  27989318 gtaaaaaaaaaaagtttagatttcaaccttgtaatttgaagattctt 27989272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 31198147 - 31198106
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactac 302  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  31198147 ctattttgaaattttgatacattt-agtgactattatgactac 31198106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 284724 - 284683
Alignment:
Q  70 attttttaagataa-taatcattttcgtccatgaatgtgtaa 110  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  284724 attttttaggataaataatcattttcgtccatgaatgtgtaa 284683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 489 - 522
Target Start/End: Original strand, 5117854 - 5117887
Alignment:
Q  489 gtttagatttcaaccttgaaatttgaagattctt 522  Q
    |||||||||||||||||| |||||||||||||||    
T  5117854 gtttagatttcaaccttgtaatttgaagattctt 5117887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 14004568 - 14004503
Alignment:
Q  494 gatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||| ||||| |||||||| ||| ||||||||| || |||||||||||| || ||||| ||||    
T  14004568 gatttcatccttgtaatttgaaaatttttggttttgaactttcatgaattttgacagtacaaaatc 14004503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 14870226 - 14870169
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| || |||||||||||| ||||||||| || ||||| ||||    
T  14870226 ccttgtaatttgaagatttttcgttttggacctttatgaattttgactgtacaaaatc 14870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 16897384 - 16897327
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||| |||||| ||||||||| || ||||| ||||    
T  16897384 ccttgtaatttgaagatttttggtttttgacctttatgaattttgactgtacaaaatc 16897327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 21568374 - 21568294
Alignment:
Q  261 tattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattaccccata 342  Q
    ||||||||||||||  |||||| ||| || ||||||||||||| || ||||||| |  ||| ||||||||||||| ||||||    
T  21568374 tattttgaaatttttgtacatt-gagagattattgtgactactcattacatattaaaagaccaaagtgactattatcccata 21568294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 675
Target Start/End: Complemental strand, 23070041 - 23070001
Alignment:
Q  634 gtaaactagaaacagctaatattacatggggtaaacatatat 675  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  23070041 gtaaactagaaacaactaatattaca-ggggtaaacatatat 23070001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 32721803 - 32721746
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| || ||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  32721803 ccttgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 32721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 38703280 - 38703223
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||| |||||||| |||||||||||||||| |||||||| || ||||| ||||    
T  38703280 ccttgtaatctgaagatttttggttttggaccttcgtgaattttgaccgtacaaaatc 38703223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 45151703 - 45151760
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||| ||||| || |||||||||| ||||||||||||||||| ||||| ||||    
T  45151703 ccttgtaatatgaagttttttggttttggtccttcatgaattttaactgtacaaaatc 45151760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 10931948 - 10932014
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||    
T  10931948 aaaaaaaattgtttagatttcaaccctgtaatttgaagaattttggttttggaccttcatgaatttt 10932014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 597
Target Start/End: Original strand, 15011865 - 15011978
Alignment:
Q  488 tgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattttaacggtacataatctat-atatggc-gaggg-aaatcgaaa 583  Q
    |||||||||||||||| || ||||||||||||| ||||||||| |||| |||||||||| |||||||| |||| || ||||||| ||||| ||| |||||    
T  15011865 tgtttagatttcaaccctgtaatttgaagattctttggttttgaacctgcatgaattttgacggtacaaaatcgatgatatggcagagggtaaaccgaaa 15011964  T
Q  584 ttcgctcaaattac 597  Q
    ||| ||||||||||    
T  15011965 ttctctcaaattac 15011978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 559
Target Start/End: Original strand, 1853159 - 1853238
Alignment:
Q  480 aaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||| ||||||||||||| | ||| || |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  1853159 aaaaaaattgtttagattcccaccctgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 1853238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 27484813 - 27484887
Alignment:
Q  480 aaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    |||| ||||||||||||||||||| || |||||||||||| ||| ||||||| ||||||||||||| || |||||    
T  27484813 aaaaaaattgtttagatttcaaccatgtaatttgaagatttttgattttggatcttcatgaattttgactgtaca 27484887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 9689566 - 9689499
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatt 543  Q
    |||||||| ||||||||||||||||||| || ||||  |||||| |||||||||| ||||||||||||    
T  9689566 gtaaaaaaaaattgtttagatttcaaccctgtaattcaaagatttttggttttggtccttcatgaatt 9689499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 2300901 - 2300958
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| || ||||| ||||    
T  2300901 ccttgtaatttgaagattcttgattttggaccttcatgaattttgactgtacaaaatc 2300958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 559
Target Start/End: Complemental strand, 2936391 - 2936318
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||||||||| || ||||||||||||| |||||||| ||||||||| |||||| || ||||| ||||    
T  2936391 ttgtttagatttcaaccatgtaatttgaagattctttggttttcgaccttcataaattttgactgtacaaaatc 2936318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 3401881 - 3401938
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  3401881 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 3401938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 5864741 - 5864684
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  5864741 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 5864684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 15635163 - 15635212
Alignment:
Q  499 caaccttgaaatttgaagattcttggttttggaccttcatgaattttaac 548  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  15635163 caaccctgtaatttgaagatttttggttttggaccttcatgaattttaac 15635212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 17155687 - 17155744
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  17155687 ccttgcaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 17155744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 26254853 - 26254796
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  26254853 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 26254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 32946365 - 32946422
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  32946365 ccttgtaatttgaagttttttggttttggaccttcatgaattttaactgtacaaaatc 32946422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 3092535 - 3092455
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||| ||||| || |||||||||||| |||  ||||||||||||| |||||| || ||||| ||||    
T  3092535 aaaaagaattgtttagattccaaccctgtaatttgaagatttttgtatttggaccttcattaattttgactgtacaaaatc 3092455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 21022653 - 21022597
Alignment:
Q  503 cttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  21022653 cttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 21022597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 13263954 - 13264005
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  13263954 aatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 13264005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 30632077 - 30632120
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  30632077 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 30632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 601
Target Start/End: Original strand, 31749399 - 31749501
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggc--gagggaaatcgaaattcgctcaaattaca 598  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| ||  |||| |||| || |||||||  | || ||||||||||| ||||||||| ||    
T  31749399 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatggcagggggtaaatcgaaatttgctcaaattgca 31749498  T
Q  599 ggg 601  Q
    |||    
T  31749499 ggg 31749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 36374225 - 36374268
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  36374225 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 36374268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 18942810 - 18942733
Alignment:
Q  261 tattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |  | ||| |||||||||| ||| |||||||||||||    
T  18942810 tattttaaaattttgatacatt-gagtgactattatgactattccttacacattcagggaccaaaatgactattacccc 18942733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 545
Target Start/End: Complemental strand, 33441175 - 33441117
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||| || || ||||| ||||||||||||  ||||||||||||||||||||||||    
T  33441175 ttgtttagtttccatccttgtaatttgaagatttctggttttggaccttcatgaatttt 33441117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 559
Target Start/End: Original strand, 442602 - 442671
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||  ||||| || ||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  442602 tttagatttcgtccttgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 2241151 - 2241094
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  2241151 ccttgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatc 2241094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 31307930 - 31307987
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  31307930 ccttgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 31307987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 547
Target Start/End: Original strand, 38130914 - 38130959
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaa 547  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||    
T  38130914 ccttgtaatttgaagatttttggttttggaccttcatgaatgttaa 38130959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 38192859 - 38192802
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  38192859 ccttgtaatttgaagttttttggttttggaccttcatgaattttgacagtacaaaatc 38192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 43707222 - 43707165
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||| |||||||||||||| || ||||| ||||    
T  43707222 ccttgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatc 43707165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 559
Target Start/End: Complemental strand, 45687893 - 45687820
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagatt-cttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||||||||||  ||||||||||||  || ||||| |||||||||||||||| || ||||| ||||    
T  45687893 ttgtttagatttcaaccttataatttgaagattatttcgttttagaccttcatgaattttgaccgtacaaaatc 45687820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 11576871 - 11576823
Alignment:
Q  497 ttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||| ||||| |||||||||||| || ||||||||||||||||||||||    
T  11576871 ttcatccttgtaatttgaagattttttgttttggaccttcatgaatttt 11576823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 20055116 - 20055064
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| |||||||||||| |||||||||||| |||||||||||| || |||||    
T  20055116 ccttgtaatttgaagatttttggttttggactttcatgaattttgactgtaca 20055064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 596
Target Start/End: Original strand, 35158262 - 35158358
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggcgaggg-aaatcgaaattcgctcaaatta 596  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| ||  |||| ||||  | |||||||| ||| ||| ||||||| ||||||||||    
T  35158262 ccttgtaatttgaagatttttgattttggaccttcatgaattttgactatacaaaatcgaagatatggcgggggtaaaccgaaatttgctcaaatta 35158358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 681
Target Start/End: Complemental strand, 43393778 - 43393710
Alignment:
Q  613 taaacaaaatttttgacagaggtaaactagaaacagctaatattacatggggtaaacatatattaaccc 681  Q
    |||||||| | ||| |||| |||||||| ||||  |||||||||||| ||||||||||| |||||||||    
T  43393778 taaacaaattcttttacaggggtaaactggaaattgctaatattacagggggtaaacatgtattaaccc 43393710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 2240711 - 2240660
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||  || ||||||||||||||||||||||||| |||||||| ||||    
T  2240711 aatttgaaattttttggttttggaccttcatgaattttgacggtacaaaatc 2240660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 8391027 - 8391094
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    |||||||| || || ||||| |||||| ||||| ||| ||||||||||||||||||||| || |||||    
T  8391027 ttgtttagtttccatccttgtaatttgtagatttttgattttggaccttcatgaattttgactgtaca 8391094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 15721009 - 15721052
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||    
T  15721009 ccttgtaatttgatgatttttggttttggaccttcatgaatttt 15721052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 554
Target Start/End: Complemental strand, 25571235 - 25571180
Alignment:
Q  499 caaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    |||||||| |||||||||||| |||||||||||| ||| |||||||| || |||||    
T  25571235 caaccttgtaatttgaagatttttggttttggacattcgtgaattttgacagtaca 25571180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 601
Target Start/End: Complemental strand, 31864006 - 31863904
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggcgaggg--aaatcgaaattcgctcaaattaca 598  Q
    ||||| ||||||||| || |||||||||||||||||||||| || || ||||| |||| || ||||| | ||||  ||| ||||||| ||||||||| ||    
T  31864006 ccttgtaatttgaagttttttggttttggaccttcatgaatcttgactgtacaaaatcgatgatatgacaaggggtaaaccgaaatttgctcaaattgca 31863907  T
Q  599 ggg 601  Q
    |||    
T  31863906 ggg 31863904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 37913961 - 37913906
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||||||||| ||||| | |||||||||  ||||||||||| |||||||||||||    
T  37913961 tttagatttcatccttgtagtttgaagatatttggttttggatcttcatgaatttt 37913906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 1344571 - 1344629
Alignment:
Q  194 ttattgtgagtatcgagagattgttttagcggtagagactattttgaccaatagagtgc 252  Q
    ||||||||||||| |||||||| ||||||||  | ||||||||||||| || |||||||    
T  1344571 ttattgtgagtattgagagattattttagcgtcatagactattttgactaacagagtgc 1344629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 522
Target Start/End: Complemental strand, 25898724 - 25898678
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattctt 522  Q
    |||||||| | |||||||||||| ||||||| |||||||||||||||    
T  25898724 gtaaaaaaaatttgtttagattttaaccttgtaatttgaagattctt 25898678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 39608700 - 39608658
Alignment:
Q  68 atattttttaagataataatcattttcgtccatgaatgtgtaa 110  Q
    |||||||||| ||||||||||||||| |||| |||||||||||    
T  39608700 atattttttaggataataatcattttagtccttgaatgtgtaa 39608658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 1853398 - 1853345
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    ||||||||||| |||||||| |||||||||| || ||| |||||||||||||||    
T  1853398 ttgtttagattccaaccttgtaatttgaagattttttgattttggaccttcatg 1853345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 681
Target Start/End: Original strand, 1853392 - 1853461
Alignment:
Q  613 taaacaaaatttttgaca-gaggtaaactagaaacagctaatattacatggggtaaacatatattaaccc 681  Q
    |||||||| ||||| ||| ||||||||| | |||   ||||||||||| |||||||||||||||||||||    
T  1853392 taaacaaatttttttacatgaggtaaaccaaaaatcactaatattacagggggtaaacatatattaaccc 1853461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 2514208 - 2514151
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||| |||||||||||| |||||||| || ||||| ||||    
T  2514208 ccttgtaatttgaagatttttgattttggaccttcgtgaattttgactgtacaaaatc 2514151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 559
Target Start/End: Complemental strand, 12005571 - 12005502
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||  ||||| || ||||||||| || ||||||||| |||||||||||| || ||||| ||||    
T  12005571 tttagatttcgtccttgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatc 12005502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 20164400 - 20164343
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||| ||||||||| || ||||| ||||    
T  20164400 ccttgtaatttgaatatttttggttttggaccttaatgaattttgactgtacaaaatc 20164343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 539
Target Start/End: Original strand, 21443938 - 21443983
Alignment:
Q  495 atttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  21443938 atttcatccttgaaatttgaagattttttggttttggaccttcatg 21443983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 21522065 - 21522008
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| || ||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  21522065 ccttgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 21522008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 24813032 - 24812983
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattc-ttggttttggacctt 535  Q
    ||||||||||||||||| || ||||||||||||| |||||||| ||||||    
T  24813032 ttgtttagatttcaaccctgtaatttgaagattctttggttttagacctt 24812983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 559
Target Start/End: Original strand, 28696471 - 28696540
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||| ||||  |||||||||||| |||||||| ||| |||||||| ||| || ||||| ||||    
T  28696471 tttagatttcatccttataatttgaagatttttggtttttgacattcatgaactttgaccgtacaaaatc 28696540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 545
Target Start/End: Original strand, 34436689 - 34436738
Alignment:
Q  496 tttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||| ||||||||||||   |||||||||||||||||||||||    
T  34436689 tttcatccttgtaatttgaagatttcaggttttggaccttcatgaatttt 34436738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 44448400 - 44448457
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  || ||||||||||||||||||||| || ||||| ||||    
T  44448400 ccttgtaatttgaagatttctgattttggaccttcatgaattttgacagtacaaaatc 44448457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 559
Target Start/End: Original strand, 47370220 - 47370289
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||  ||||| || ||||||||| ||  ||||||||||||||||||||| || ||||| ||||    
T  47370220 tttagatttcgtccttgtaacttgaagattttttattttggaccttcatgaattttgactgtacaaaatc 47370289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 487 - 559
Target Start/End: Original strand, 31567697 - 31567769
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||| || ||||| ||||    
T  31567697 ttgtttagatttcatccttgtaatttgaagatttttggttttggaccttcaagaattttgactgtacaaaatc 31567769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 559
Target Start/End: Original strand, 20355068 - 20355151
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||| |||||||| |||||||||  || |||||||||||| ||||||||| ||||||||||||||| || ||||| ||||    
T  20355068 gtaaaaaaaaattgttttgatttcaacactgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatc 20355151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 21144258 - 21144191
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||||||||| |||||||| |||||||||||| || | ||||||||||||||||||||||| |||||    
T  21144258 ttgtttagattccaaccttgtaatttgaagatttttaggtttggaccttcatgaattttaaccgtaca 21144191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 595
Target Start/End: Complemental strand, 35687481 - 35687379
Alignment:
Q  495 atttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggc-gagggaaatcgaaattcgctcaa 592  Q
    |||||| ||||| |||||||||||| ||| |||||||| ||||| |||||| |||||||| |||| || ||||| | |||| ||||||||||| ||||||    
T  35687481 atttcatccttgtaatttgaagatttttgattttggactttcataaattttgacggtacaaaatcgatgatatgacggaggtaaatcgaaatttgctcaa 35687382  T
Q  593 att 595  Q
    |||    
T  35687381 att 35687379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 4414006 - 4414063
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  4414006 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 4414063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 7577988 - 7577931
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  7577988 ccttgtaatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatc 7577931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 11721345 - 11721402
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  11721345 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 11721402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 16127124 - 16127044
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattaccccat 341  Q
    |||||||||||||||||||| |||||| ||||||||||||||||  | ||| ||| |||||| ||| |||||||||| ||||    
T  16127124 ctattttgaaattttgatac-tttgagagactattgtgactactccttacacatttagggaccaaaatgactattactccat 16127044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 25233922 - 25233865
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  25233922 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 25233865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 25298082 - 25298025
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  25298082 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 25298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 511 - 598
Target Start/End: Complemental strand, 13153779 - 13153689
Alignment:
Q  511 ttgaagattcttggttttggaccttcatgaattttaacggtacataatcta-tatatggc--gagggaaatcgaaattcgctcaaattaca 598  Q
    ||||||||| ||||||||||||||||||||||||| || ||||| |||| | ||||||||  | || ||| |||||||| |||||||||||    
T  13153779 ttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcaattatatggcagggggtaaaccgaaattctctcaaattaca 13153689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 22756360 - 22756317
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  22756360 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 22756317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 23159103 - 23159025
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    ||||||| ||||||||||||||| ||  ||||||| | |||| | || ||| ||||||||||||||||||||||||||||    
T  23159103 ctattttaaaattttgatacatt-gatggactattataactaatcattacacattcagggactaaagtgactattacccc 23159025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 23159552 - 23159603
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  23159552 aatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatc 23159603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 25962881 - 25962924
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  25962881 ccttgtaatttgaagatttttggttttggaccttcatgaatttt 25962924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 37869619 - 37869557
Alignment:
Q  479 aaaaacaattgtttagatttc-aaccttgaaatttgaagattc-ttggttttggaccttcatg 539  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  37869619 aaaaaaaattgtttagatttccaaccttgtaatttgaagattctttgattttggaccttcatg 37869557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 544
Target Start/End: Complemental strand, 41123440 - 41123398
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattt 544  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  41123440 ccttgtaatttgaagatttttggttttggaccttcatgaattt 41123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 8855477 - 8855534
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  8855477 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 8855534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 12148204 - 12148147
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  12148204 ccttgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 12148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 545
Target Start/End: Original strand, 26243186 - 26243223
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||||||||||||||||||||    
T  26243186 aatttgaagatttttggttttggaccttcatgaatttt 26243223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 31920139 - 31920196
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  31920139 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 31920196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 38874633 - 38874576
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||| | ||||| ||||    
T  38874633 ccttgtaatttgaagatttttggttttggaccttcatgaatgttagctgtacaaaatc 38874576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 26675115 - 26675147
Alignment:
Q  157 taatgttaaaatatttcattaatattgtcatat 189  Q
    |||||||||||||||||||||||||||||||||    
T  26675115 taatgttaaaatatttcattaatattgtcatat 26675147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 26946723 - 26946755
Alignment:
Q  157 taatgttaaaatatttcattaatattgtcatat 189  Q
    |||||||||||||||||||||||||||||||||    
T  26946723 taatgttaaaatatttcattaatattgtcatat 26946755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 31312748 - 31312692
Alignment:
Q  503 cttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||| |||||||||||| |||||||| |||||||||||||||| || ||||| ||||    
T  31312748 cttgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatc 31312692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 539
Target Start/End: Original strand, 42097732 - 42097776
Alignment:
Q  495 atttcaaccttgaaatttgaagattcttggttttggaccttcatg 539  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||    
T  42097732 atttcatccttgtaatttgaagatttttggttttggaccttcatg 42097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 28796426 - 28796469
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||    
T  28796426 ccttgtaatttgaagatttttggttttgaaccttcatgaatttt 28796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 37217499 - 37217456
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||    
T  37217499 ccttgtaatttgaagatttttggttttggaccttcataaatttt 37217456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 40765463 - 40765506
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||| || |||||||||||||||||||||||||    
T  40765463 ccttgtaatttgaagttttttggttttggaccttcatgaatttt 40765506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 29686499 - 29686426
Alignment:
Q  261 tattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactatta 335  Q
    |||||||||||||| ||||||| ||| || ||||||||||||| || | | ||||| |||| |||||||||||||    
T  29686499 tattttgaaattttaatacatt-gagggattattgtgactactcattatacattcatggaccaaagtgactatta 29686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 545
Target Start/End: Complemental strand, 38083121 - 38083055
Alignment:
Q  480 aaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaatttt 545  Q
    |||| ||||||||||||||||||   | ||||||||||||| ||| |||||||||||||||| ||||    
T  38083121 aaaaaaattgtttagatttcaacacagtaatttgaagattctttgattttggaccttcatgagtttt 38083055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 545
Target Start/End: Complemental strand, 4561893 - 4561856
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  4561893 aatttgaagatttttggttttggatcttcatgaatttt 4561856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 17885999 - 17885942
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||| | |||||||||||| |||||||||||| || ||||| ||||    
T  17885999 ccttgtaatttgaagaattttggttttggactttcatgaattttgacagtacaaaatc 17885942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 21039944 - 21040001
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| || |||||||||||||||||||||| || ||||| ||||    
T  21039944 ccttgtaatttgaatattttttgttttggaccttcatgaattttgactgtacaaaatc 21040001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 539
Target Start/End: Original strand, 21144015 - 21144076
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    ||||| ||||||||||||| ||||| || |||||||||| || ||| |||||||||||||||    
T  21144015 aaaaaaaattgtttagattccaaccctgtaatttgaagattttttgattttggaccttcatg 21144076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 25088844 - 25088787
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||| ||||||||| || ||||| ||||    
T  25088844 ccttgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatc 25088787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 25146813 - 25146756
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||| ||||||||| || ||||| ||||    
T  25146813 ccttgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatc 25146756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 539
Target Start/End: Original strand, 25233707 - 25233744
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatg 539  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  25233707 ccttgtaatttgaagatttttggttttggaccttcatg 25233744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 539
Target Start/End: Original strand, 25297867 - 25297904
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatg 539  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  25297867 ccttgtaatttgaagatttttggttttggaccttcatg 25297904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 539
Target Start/End: Complemental strand, 26243403 - 26243358
Alignment:
Q  495 atttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  26243403 atttcatccttgaaatttgaagattttttggttttggaccttcatg 26243358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 34309606 - 34309549
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || || |||||||||||||||||||||| || ||||| ||||    
T  34309606 ccttgtaatttgaagttttttagttttggaccttcatgaattttgactgtacaaaatc 34309549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 539
Target Start/End: Original strand, 37217378 - 37217423
Alignment:
Q  495 atttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  37217378 atttcatccttgaaatttgaagattttttggttttggaccttcatg 37217423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 25104039 - 25103974
Alignment:
Q  494 gatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  25104039 gatttcatccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 25103974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 487 - 559
Target Start/End: Original strand, 42223089 - 42223161
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||||||||| || |||||||||| | ||||||||||| ||||||||||||| || ||||| ||||    
T  42223089 ttgtttagatttcaaccctgtaatttgaagaattttggttttggatcttcatgaattttgactgtacaaaatc 42223161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 7318171 - 7318228
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  7318171 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 7318228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 598
Target Start/End: Original strand, 39373073 - 39373173
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggc--gaggg-aaatcgaaattcgctcaaattac 597  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || | ||| ||||  |||||||||  ||||| ||| ||||||| |||||||||||    
T  39373073 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactggacaaaatcgaatatatggcaggagggtaaaccgaaatttgctcaaattac 39373172  T
Q  598 a 598  Q
    |    
T  39373173 a 39373173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 33218621 - 33218569
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || |||||    
T  33218621 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtaca 33218569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 38127842 - 38127894
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || |||||    
T  38127842 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtaca 38127894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 35791057 - 35791132
Alignment:
Q  485 aattgtttagatttcaaccttgaaatttgaagattct-tggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||||| ||||| || |||||||| ||||| || ||||||||||||||||||||| || ||||| ||||    
T  35791057 aattgtttagattccaaccctgtaatttgaatattctctgtttttggaccttcatgaattttgactgtacaaaatc 35791132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 485 - 559
Target Start/End: Complemental strand, 17188933 - 17188859
Alignment:
Q  485 aattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||| | ||||  ||||| | |||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  17188933 aattgttttgttttcgtccttgtagtttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 17188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 596
Target Start/End: Original strand, 19253479 - 19253576
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggcgaggg--aaatcgaaattcgctcaaatta 596  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| || ||||| ||||  | |||||||  |||  ||| ||||||||||||||||||    
T  19253479 ccttgtaagttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaaaatatggcatgggttaaaccgaaattcgctcaaatta 19253576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 545
Target Start/End: Complemental strand, 26498813 - 26498763
Alignment:
Q  495 atttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||| ||||| ||||||||| || |||||||||||||||||||||||||    
T  26498813 atttcatccttgtaatttgaagttttttggttttggaccttcatgaatttt 26498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 559
Target Start/End: Original strand, 41906045 - 41906127
Alignment:
Q  477 taaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||| | ||||||||| | ||||| || |||||||||||  |||||||| |||||||||||||||| || ||||| ||||    
T  41906045 taaaaaaaatttgtttagaatccaaccctgtaatttgaagatatttggttttcgaccttcatgaattttgactgtacaaaatc 41906127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 776570 - 776513
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| || ||||| ||||    
T  776570 ccttgtaatttgaagattgttgattttggaccttcatgaattttgacagtacaaaatc 776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 1975778 - 1975721
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  1975778 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 1975721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 15544009 - 15543952
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  15544009 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 15543952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 18048896 - 18048953
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  18048896 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 18048953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 18755320 - 18755263
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||| |  ||||||||||||||||||||||||||| ||||| ||||    
T  18755320 ccttgtaatttgaagacttatggttttggaccttcatgaattttaactgtacaaaatc 18755263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 18756645 - 18756588
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||| || ||||| ||||    
T  18756645 ccttgtaatttaaagatttttggttttggaccttcatgaattttgactgtacaaaatc 18756588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 29949635 - 29949692
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  29949635 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 29949692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 34831571 - 34831628
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||| |||||||||||||| || ||||| ||||    
T  34831571 ccttgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatc 34831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 38949936 - 38949993
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  38949936 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 38949993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 42794091 - 42794148
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  42794091 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 42794148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 43830798 - 43830741
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  43830798 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 43830741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 538
Target Start/End: Original strand, 11478052 - 11478104
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcat 538  Q
    ||||||||||||||||| || |||||||| |||| ||||||||||||||||||    
T  11478052 ttgtttagatttcaaccctgtaatttgaaaattctttggttttggaccttcat 11478104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 36525355 - 36525407
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || |||||    
T  36525355 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtaca 36525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 2526431 - 2526474
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||| || |||||||||||||||||||||||||    
T  2526431 ccttgtaatttgaagttttttggttttggaccttcatgaatttt 2526474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 7008069 - 7008026
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||| || |||||||||||||||||||||||||    
T  7008069 ccttgtaatttgaagttttttggttttggaccttcatgaatttt 7008026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 559
Target Start/End: Complemental strand, 15580673 - 15580606
Alignment:
Q  493 agatttcaaccttgaaatttgaagattcttgg-ttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||| |||| |||||||||||| || | ||||||||||||||||||||| || ||||| ||||    
T  15580673 agatttcaatcttgtaatttgaagattttttgattttggaccttcatgaattttgaccgtacaaaatc 15580606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 16204597 - 16204546
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||| | |||||||||||| ||||||||||||||| ||||| ||||    
T  16204597 aatttgaagaattttggttttggacattcatgaattttaactgtacaaaatc 16204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 540
Target Start/End: Complemental strand, 16590725 - 16590662
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaagatt-cttggttttggaccttcatga 540  Q
    |||||| ||||||||| ||||||| | || ||||||||||||  ||||||||||||||||||||    
T  16590725 aaaaaaaaattgtttatatttcaaacctgtaatttgaagattatttggttttggaccttcatga 16590662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 33315227 - 33315278
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||||  |||||||||||||||||| ||||| |||||||| ||||    
T  33315227 aatttgaagatttatggttttggaccttcatggattttgacggtacaaaatc 33315278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 41100778 - 41100829
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||||  |||||||||||||||||||||||| || ||||| ||||    
T  41100778 aatttgaagatttatggttttggaccttcatgaattttgacagtacaaaatc 41100829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 21603487 - 21603441
Alignment:
Q  288 gactattgtgactactgatcacatattcagggactaaagtgactatt 334  Q
    |||||||||||||||| |||||  |||||||||| ||||||||||||    
T  21603487 gactattgtgactactcatcactcattcagggaccaaagtgactatt 21603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 30497215 - 30497273
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| || ||||| ||||| ||||||||||||  ||||||| ||||||||||||||||    
T  30497215 ttgttcagttttcatccttgtaatttgaagatttctggttttagaccttcatgaatttt 30497273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 874433 - 874490
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| |||||||| |||||||||||||||| || ||||| ||||    
T  874433 ccttgtaatttgaatatttttggttttagaccttcatgaattttgactgtacaaaatc 874490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 10071426 - 10071369
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||| ||||||||| || ||||| ||||    
T  10071426 ccttgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatc 10071369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 545
Target Start/End: Original strand, 16590510 - 16590571
Alignment:
Q  485 aattgtttagatttcaaccttgaaatttgaagattctt-ggttttggaccttcatgaatttt 545  Q
    ||||||||||||| ||||  || |||||||||||| || ||||||| |||||||||||||||    
T  16590510 aattgtttagattccaactctgtaatttgaagattttttggttttgcaccttcatgaatttt 16590571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 545
Target Start/End: Original strand, 19272747 - 19272784
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  19272747 aatttgaagatttttggttttagaccttcatgaatttt 19272784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 539
Target Start/End: Original strand, 33218397 - 33218442
Alignment:
Q  495 atttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  33218397 atttcatccttgaaatttgaagattttttggttttggaccttcatg 33218442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 39752156 - 39752099
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  |||||||||||||| ||||||||| || ||||| ||||    
T  39752156 ccttgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatc 39752099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 8809935 - 8810003
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaa 547  Q
    ||||| ||||||||||||||||| |||  |||||||||||| || |||||| |||||||||||||||||    
T  8809935 aaaaaaaattgtttagatttcaatcttataatttgaagatttttagttttgaaccttcatgaattttaa 8810003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 13555943 - 13555876
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatt 543  Q
    |||||||| ||||||||||||||||||| || ||||  |||||| |||||||||| ||||||||||||    
T  13555943 gtaaaaaaaaattgtttagatttcaaccctgtaattcaaagatttttggttttggtccttcatgaatt 13555876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 17753333 - 17753258
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactatta 335  Q
    |||||||||||||||||||||||  | ||||||||||||||||| || |||||||||| ||  ||| |||||||||    
T  17753333 ctattttgaaattttgatacattgaaatgactattgtgactactcattacatattcagagatcaaaatgactatta 17753258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 18165200 - 18165133
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    |||||||| ||||| ||||| ||||||||||||  |||||||||||||||||||||||| || |||||    
T  18165200 ttgtttagttttcatccttgtaatttgaagatttctggttttggaccttcatgaattttgactgtaca 18165133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 4161696 - 4161619
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattaccc 338  Q
    |||||||||||||||||||||||  || |||||||||||||||| || ||| |||  ||||| ||||||||||||||||    
T  4161696 ctattttgaaattttgatacattgaag-gactattgtgactactcattacacatttggggacgaaagtgactattaccc 4161619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 3652350 - 3652407
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  3652350 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 3652407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 17696360 - 17696303
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  17696360 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 17696303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 30918997 - 30919054
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  30918997 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 30919054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 42161269 - 42161338
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||| | ||||||||||||||||||  || |||||||||||| ||| |||| ||||||||||||||||    
T  42161269 gtaaaataaaattgtttagatttcaactctgtaatttgaagatttttgatttttgaccttcatgaatttt 42161338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 50773368 - 50773425
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  50773368 ccttgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 50773425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 39133170 - 39133261
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc-tatatatggcgaggg--aaatcgaaattcgctcaaatta 596  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||||  | |||||||  |||  ||||||||||| ||||||||||    
T  39133170 aatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatggcaggggacaaatcgaaatttgctcaaatta 39133261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 8170993 - 8171071
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    ||||||||||||||| ||||| ||||| ||||||| |||||||| || ||| || ||||||| ||||||||| |||||||    
T  8170993 ctattttgaaatttttataca-ttgagggactattatgactactcattacacatccagggaccaaagtgactgttacccc 8171071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 487 - 545
Target Start/End: Complemental strand, 9780599 - 9780540
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattctt-ggttttggaccttcatgaatttt 545  Q
    ||||||||||| ||||| || |||||||||||| || |||||||||||||||||||||||    
T  9780599 ttgtttagattacaaccatgtaatttgaagattatttggttttggaccttcatgaatttt 9780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 12034456 - 12034378
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||  | | | |||||||||| ||| |||||||||||||    
T  12034456 ctattttgcaattttgatacatt-gagggactattgtgactactcgttatacattcagggaccaaaatgactattacccc 12034378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 16734136 - 16734203
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattct-tggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||||||| ||||| || |||||||||||||| ||||||| || |||||||||||||    
T  16734136 aaaaaaaattgtttagattccaaccctgtaatttgaagattctatggttttagagcttcatgaatttt 16734203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 5283657 - 5283723
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||| |||||||||  |  |||||||||||| ||||||||| |||||||||||||||    
T  5283657 aaaaaaaattgttttgatttcaacactttaatttgaagatttttggttttgaaccttcatgaatttt 5283723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 683
Target Start/End: Original strand, 21745031 - 21745065
Alignment:
Q  649 ctaatattacatggggtaaacatatattaacccaa 683  Q
    |||||||||||||||||||||||||||||||||||    
T  21745031 ctaatattacatggggtaaacatatattaacccaa 21745065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 548
Target Start/End: Complemental strand, 30409401 - 30409355
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaac 548  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||    
T  30409401 ccttgtaatttgaagttttttggttttggaccttcatgaattttaac 30409355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 596
Target Start/End: Original strand, 42056058 - 42056155
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatctat-atatggc--gagggaaatcgaaattcgctcaaatta 596  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| |||| || |||||||  | || ||| ||||||| ||||||||||    
T  42056058 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcagggggtaaaccgaaatttgctcaaatta 42056155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 7913408 - 7913351
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  7913408 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 7913351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 540
Target Start/End: Complemental strand, 8810189 - 8810124
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaaga-ttcttggttttggaccttcatga 540  Q
    |||||||| ||||||| |||||||||||||| |||||||||| || ||  ||||||||||||||||    
T  8810189 gtaaaaaaaaattgttaagatttcaaccttgtaatttgaagatttttttattttggaccttcatga 8810124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 21507905 - 21507962
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  21507905 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 21507962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 22854043 - 22854100
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  22854043 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 22854100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 559
Target Start/End: Complemental strand, 25244667 - 25244598
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||||||   |||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  25244667 tttagatttcgttcttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 25244598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 545
Target Start/End: Complemental strand, 31226471 - 31226434
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||||||||||||||||||||    
T  31226471 aatttgaagatttttggttttggaccttcatgaatttt 31226434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 32682467 - 32682410
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  32682467 ccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatc 32682410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 49166725 - 49166782
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  49166725 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 49166782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 545
Target Start/End: Original strand, 50719675 - 50719712
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||||||||||||||||||||    
T  50719675 aatttgaagatttttggttttggaccttcatgaatttt 50719712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 17381582 - 17381653
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgacta 332  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||  | ||  |||||||||| ||||||||||    
T  17381582 ctattttggaattttgataca-ttgagggactattgtgactacttgttactcattcagggaccaaagtgacta 17381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 11840066 - 11840144
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    ||||||||||||||||||||| ||||| | |||||| |||||||  | ||  |||||||||| ||| |||||||||||||    
T  11840066 ctattttgaaattttgataca-ttgagggcctattgcgactactccttacgcattcagggaccaaaatgactattacccc 11840144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 12388152 - 12388207
Alignment:
Q  490 tttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||||||||  ||||| ||| | |||||| |||||||||||||||||||||||||    
T  12388152 tttagatttcgtccttgtaatgtaaagatttttggttttggaccttcatgaatttt 12388207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 545
Target Start/End: Complemental strand, 23091936 - 23091869
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaaga-ttcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||||||| |||||||| |||||||||| || || |||||| |||||||| ||||||    
T  23091936 aaaaaaaattgtttagattccaaccttgtaatttgaagattttttagttttgaaccttcataaatttt 23091869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 49277931 - 49277864
Alignment:
Q  488 tgtttagatttcaaccttgaaatttgaagatt-cttggttttggaccttcatgaattttaacggtaca 554  Q
    |||||||||| |||||||| ||||||||||||  ||||||||| |||||||| |||||| ||| ||||    
T  49277931 tgtttagattccaaccttgtaatttgaagattatttggttttgaaccttcataaattttgacgataca 49277864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 544
Target Start/End: Original strand, 24675359 - 24675401
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattt 544  Q
    ||||| |||||||||||  ||||||||||||||||||||||||    
T  24675359 ccttgtaatttgaagatatttggttttggaccttcatgaattt 24675401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 29104239 - 29104297
Alignment:
Q  502 ccttgaaatttgaagattctt-ggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||||| ||||| ||||    
T  29104239 ccttgtaatttgaagattttttggttttagaccttcatgaattttaactgtacaaaatc 29104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 35255495 - 35255572
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattaccc 338  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||||||  | ||||||| |||||| ||| | ||||||||||    
T  35255495 ctattttaaaattttaatacatt-gagagactattgtgactactcgttacatatttagggaccaaaataactattaccc 35255572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 544
Target Start/End: Complemental strand, 41325508 - 41325466
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattt 544  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||    
T  41325508 ccttgtaatttgaatatttttggttttggaccttcatgaattt 41325466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 540
Target Start/End: Complemental strand, 49533340 - 49533278
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagatt-cttggttttggaccttcatga 540  Q
    ||||| |||||||||||||  ||||||  ||||||||||||  ||||||||||||||||||||    
T  49533340 aaaaaaaattgtttagattataaccttataatttgaagattatttggttttggaccttcatga 49533278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 971919 - 971844
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacc 337  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||  | ||| |||||| |||  ||||||||||||||    
T  971919 ctattttgaaattttgataca-ttgaatgactattgtgacaactcgttacaaattcagtgac-caagtgactattacc 971844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 545
Target Start/End: Complemental strand, 5514645 - 5514608
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  5514645 aatttgaagatttttggttttggacctttatgaatttt 5514608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 14121542 - 14121485
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || |||||||||||| |||||||||||| || ||||| ||||    
T  14121542 ccttgtaatttgaagttttttggttttggactttcatgaattttgactgtacaaaatc 14121485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 18510062 - 18510119
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| || ||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  18510062 ccttgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 18510119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 23184836 - 23184892
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||| || ||||| ||||    
T  23184836 ccttgtaatttgaagatttttggttt-ggaccttcatgaattttgactgtacaaaatc 23184892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 539
Target Start/End: Complemental strand, 36395516 - 36395479
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatg 539  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  36395516 ccttgtaatttgaagatttttggttttggaccttcatg 36395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 49296297 - 49296240
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| || ||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  49296297 ccttgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 49296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 545
Target Start/End: Complemental strand, 53658855 - 53658818
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaatttt 545  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  53658855 aatttgaagatttttggttttggaccttcataaatttt 53658818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 559
Target Start/End: Original strand, 33864105 - 33864188
Alignment:
Q  477 taaaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||| ||||||||||||| ||||| || ||||||||||||| ||||||||| | ||||||||||||| || ||||| ||||    
T  33864105 taaaaaaaaattgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatc 33864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 559
Target Start/End: Complemental strand, 33916817 - 33916734
Alignment:
Q  477 taaaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||||| ||||||||||||| ||||| || ||||||||||||| ||||||||| | ||||||||||||| || ||||| ||||    
T  33916817 taaaaaaaaattgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatc 33916734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 545
Target Start/End: Complemental strand, 1701231 - 1701173
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1701231 ttgtttagatttcaaccctgtaatttaaagatttttggtttaggaccttcatgaatttt 1701173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 33465301 - 33465251
Alignment:
Q  631 gaggtaaactagaaacagctaatattacatggggtaaacatatattaaccc 681  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  33465301 gaggtaaacaagaaaccgctaatattacaaggggtaaacatatattaaccc 33465251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 23161905 - 23161962
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| |||||||| ||||    
T  23161905 ccttgtaatttgaagatttttgattttggaccttcatgaattttgacggtacaaaatc 23161962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 26190810 - 26190867
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  26190810 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 26190867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 545
Target Start/End: Original strand, 9240522 - 9240590
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatgaatttt 545  Q
    |||||| |||||||||||||| |||| || ||||||||||||| ||| ||||||||||| |||||||||    
T  9240522 aaaaaaaaattgtttagatttgaaccctgtaatttgaagattctttgattttggacctttatgaatttt 9240590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 44228339 - 44228398
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattctt-ggttttggaccttcatgaatttt 545  Q
    ||||||||||| ||||| || ||||| ||||||||| |||||||||||||||||||||||    
T  44228339 ttgtttagattacaaccctgtaatttaaagattctttggttttggaccttcatgaatttt 44228398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 5469347 - 5469413
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| ||||||||||||| |||||||  |||||||||||| || |||||||| |||||| ||||||    
T  5469347 aaaaataattgtttagattccaaccttataatttgaagatttttagttttggatcttcattaatttt 5469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 544
Target Start/End: Original strand, 5932041 - 5932083
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattt 544  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  5932041 ccttgtaatttgaagatttttggttttggaccttcatgaattt 5932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 9209654 - 9209711
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  9209654 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatc 9209711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 14910054 - 14909997
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||| |||||||||||||||||||||||| ||||| ||||    
T  14910054 ccttgtaatttgaagttttttgcttttggaccttcatgaattttaactgtacaaaatc 14909997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 535
Target Start/End: Complemental strand, 33864329 - 33864272
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggacctt 535  Q
    ||||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  33864329 aaaaaaaattgtttagattccaaccctgtaatttgaagattctttggttttggacctt 33864272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 535
Target Start/End: Original strand, 33916593 - 33916650
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggacctt 535  Q
    ||||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  33916593 aaaaaaaattgtttagattccaaccctgtaatttgaagattctttggttttggacctt 33916650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 38267444 - 38267520
Alignment:
Q  261 tattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattaccc 338  Q
    |||||||||||||| ||||||| ||| |||||||||||| ||| |  ||||||| |||||| ||| ||||||||||||    
T  38267444 tattttgaaatttttatacatt-gagggactattgtgaccacttactacatattgagggaccaaaatgactattaccc 38267520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 47231196 - 47231253
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  47231196 ccttgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatc 47231253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 540
Target Start/End: Complemental strand, 7261589 - 7261533
Alignment:
Q  485 aattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttcatga 540  Q
    ||||||||||||| ||||| || |||||||| |||| ||||||||||||||||||||    
T  7261589 aattgtttagattccaaccctgtaatttgaacattctttggttttggaccttcatga 7261533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 20158944 - 20158888
Alignment:
Q  503 cttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  20158944 cttgtaatttgaatatttttggttttggaccttcatgaattttgaccgtacaaaatc 20158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 539
Target Start/End: Original strand, 22315199 - 22315263
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaaga-ttcttggttttggaccttcatg 539  Q
    |||||||| ||||||||||||| ||||| || |||||||||| || ||| |||||||||||||||    
T  22315199 gtaaaaaaaaattgtttagattccaaccctgtaatttgaagattttttgattttggaccttcatg 22315263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 26399152 - 26399100
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| || |||||    
T  26399152 ccttgtaatttgaatatttttggttttggaccttcatgaattttgactgtaca 26399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 559
Target Start/End: Original strand, 30147130 - 30147202
Alignment:
Q  487 ttgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||| | |||| |||||| ||||||||||||  |||||||||||||| ||||||||| || ||||| ||||    
T  30147130 ttgtttggttttcgaccttgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatc 30147202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 5457160 - 5457203
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||    
T  5457160 ccttgtaatttgaatatttttggttttggaccttcatgaatttt 5457203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 27665996 - 27666039
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||    
T  27665996 ccttgtaatttgaagatttttggttttcgaccttcatgaatttt 27666039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 35684921 - 35684999
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattacccc 339  Q
    ||||||||| |||||||||||||  || ||||||||| |||||| ||  || |||||||||| ||||||||||| |||||    
T  35684921 ctattttgagattttgatacattgaag-gactattgtaactactcattgcacattcagggaccaaagtgactataacccc 35684999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 45679650 - 45679587
Alignment:
Q  192 agttattgtgagtatcgagagattgttttagcggtagagactattttgaccaatagagtgcaca 255  Q
    ||||||||||||||| |||| ||| ||| ||||  |||||| |||||||| |||||||||||||    
T  45679650 agttattgtgagtattgagatattatttcagcgtcagagaccattttgactaatagagtgcaca 45679587  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 7261604 - 7261653
Alignment:
Q  633 ggtaaactagaaacagctaatattaca--tggggtaaacatatattaacc 680  Q
    |||||||||||||| ||||||||||||   ||||||||||||||||||||    
T  7261604 ggtaaactagaaaccgctaatattacagggggggtaaacatatattaacc 7261653  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 10018777 - 10018720
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagg 318  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||||| | |||||||||||    
T  10018777 ctattttaaaattttgatacatt-gatagactattgtgactactggttacatattcagg 10018720  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 536
Target Start/End: Complemental strand, 44078806 - 44078748
Alignment:
Q  479 aaaaacaattgtttagatttcaaccttgaaatttgaagattc-ttggttttggaccttc 536  Q
    ||||| ||||||||||||| |||||||| ||||||||||| | || |||||||||||||    
T  44078806 aaaaagaattgtttagattccaaccttgtaatttgaagatccttttgttttggaccttc 44078748  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 633 - 683
Target Start/End: Original strand, 44228558 - 44228608
Alignment:
Q  633 ggtaaactagaaacagctaatattacatggggtaaacatatattaacccaa 683  Q
    |||||||  ||||| || ||||||||| |||||||||||||||||||||||    
T  44228558 ggtaaacctgaaaccgccaatattacaaggggtaaacatatattaacccaa 44228608  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 21770834 - 21770891
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||  |||||||||||||| || ||||| ||||    
T  21770834 ccttgtaatttgaagatttttggttttgtgccttcatgaattttgactgtacaaaatc 21770891  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 22387471 - 22387414
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||| |||||| ||||||||||||||||| ||||||| || ||||| ||||    
T  22387471 ccttgtaatttaaagatttttggttttggaccttcaagaattttgactgtacaaaatc 22387414  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 25060095 - 25060042
Alignment:
Q  492 tagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||||||||  ||| |||||||||||| || |||||| |||||||||||||||    
T  25060095 tagatttcaattttgtaatttgaagatttttagttttgaaccttcatgaatttt 25060042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 41189916 - 41189973
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||||||||  ||||||| |||||||||| ||||| |||||||| ||||    
T  41189916 ccttgtaatttgaagatttatggttttagaccttcatggattttgacggtacaaaatc 41189973  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 212592 - 212649
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  212592 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 212649  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 554
Target Start/End: Original strand, 82202 - 82279
Alignment:
Q  476 gtaaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtaca 554  Q
    |||||||||| ||||||||||| ||||| || ||||||||  || || ||||| |||||||||||||||| || |||||    
T  82202 gtaaaaaaca-ttgtttagattccaaccatgtaatttgaaatttttttgttttagaccttcatgaattttgactgtaca 82279  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 332143 - 332200
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  332143 ccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 332200  T

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Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 432683 - 432632
Alignment:
Q  508 aatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||| ||||||| ||||||||||||| ||||||||||| |||||||| ||||    
T  432683 aattggaagatttttggttttggaccatcatgaattttgacggtacaaaatc 432632  T

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Target: scaffold0142 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 35062 - 35002
Alignment:
Q  485 aattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaatttt 545  Q
    ||||||||||||||||||| || |||||||||||| |  |||| |||||||||||||||||    
T  35062 aattgtttagatttcaaccctgtaatttgaagattttgtgtttcggaccttcatgaatttt 35002  T

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Target: scaffold0430 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 12787 - 12722
Alignment:
Q  494 gatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||| |||||| ||||  |||||| ||||||||||||||||||||||||| || ||||| ||||    
T  12787 gatttcgaccttgtaattcaaagatttttggttttggaccttcatgaattttgacagtacaaaatc 12722  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 18888 - 18839
Alignment:
Q  510 tttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    |||||||||| ||||||||||||||||||||||||| || ||||| ||||    
T  18888 tttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 18839  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 63327 - 63270
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| || ||||| ||||    
T  63327 ccttgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatc 63270  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 544
Target Start/End: Original strand, 316488 - 316554
Alignment:
Q  478 aaaaaacaattgtttagatttcaaccttgaaatttgaagattcttggttttggaccttcatgaattt 544  Q
    |||||| |||||||||||||| |||| || |||||||||||| || | ||| || ||||||||||||    
T  316488 aaaaaaaaattgtttagattttaaccctgtaatttgaagattatttggttttgaacttcatgaattt 316554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 6473 - 6553
Alignment:
Q  260 ctattttgaaattttgatacatttgagtgactattgtgactactgatcacatattcagggactaaagtgactattaccccat 341  Q
    |||||||||||||||||| || ||||  ||||||| |||||| | || ||| ||||||| |||||| ||||||||| |||||    
T  6473 ctattttgaaattttgattca-ttgaaggactattatgactattcattacacattcaggtactaaaatgactattatcccat 6553  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 681
Target Start/End: Original strand, 13414 - 13447
Alignment:
Q  648 gctaatattacatggggtaaacatatattaaccc 681  Q
    |||||||||||| |||||||||||||||||||||    
T  13414 gctaatattacagggggtaaacatatattaaccc 13447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 12547 - 12604
Alignment:
Q  502 ccttgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 559  Q
    ||||| |||||||||||| |||||||||||| | |||||||||| || ||||| ||||    
T  12547 ccttgtaatttgaagatttttggttttggacttccatgaattttgactgtacaaaatc 12604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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