View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1351_low_1 (Length: 1080)

Name: NF1351_low_1
Description: NF1351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1351_low_1
NF1351_low_1
[»] chr3 (29 HSPs)
chr3 (499-1056)||(34897379-34897940)
chr3 (52-347)||(34898023-34898322)
chr3 (396-521)||(1995448-1995573)
chr3 (436-510)||(52859272-52859346)
chr3 (396-504)||(19830394-19830502)
chr3 (396-504)||(27033655-27033763)
chr3 (396-504)||(43719910-43720018)
chr3 (396-506)||(10474400-10474509)
chr3 (396-465)||(2229987-2230056)
chr3 (7-52)||(34899930-34899975)
chr3 (396-504)||(29586340-29586447)
chr3 (400-503)||(44637950-44638052)
chr3 (396-470)||(54911658-54911732)
chr3 (396-469)||(33632827-33632899)
chr3 (396-465)||(34373835-34373904)
chr3 (408-504)||(24754673-24754769)
chr3 (408-504)||(24763670-24763766)
chr3 (396-511)||(48084823-48084939)
chr3 (396-459)||(34373593-34373656)
chr3 (396-469)||(31523666-31523739)
chr3 (396-504)||(51982549-51982656)
chr3 (437-506)||(30235416-30235484)
chr3 (399-504)||(40851781-40851886)
chr3 (396-469)||(42613084-42613157)
chr3 (396-465)||(46167397-46167466)
chr3 (396-469)||(49679268-49679341)
chr3 (397-461)||(25285843-25285907)
chr3 (411-499)||(47750274-47750361)
chr3 (408-469)||(550814-550875)
[»] chr6 (21 HSPs)
chr6 (396-512)||(7215807-7215923)
chr6 (396-512)||(2800566-2800682)
chr6 (396-513)||(4804452-4804569)
chr6 (396-504)||(7162088-7162196)
chr6 (396-504)||(21159332-21159440)
chr6 (396-462)||(27826542-27826608)
chr6 (396-504)||(17828532-17828639)
chr6 (396-504)||(17944166-17944274)
chr6 (396-465)||(12412641-12412710)
chr6 (396-465)||(13089751-13089820)
chr6 (408-502)||(23936269-23936365)
chr6 (396-469)||(24484883-24484956)
chr6 (396-504)||(227526-227635)
chr6 (396-467)||(32254031-32254102)
chr6 (396-465)||(1249150-1249217)
chr6 (469-511)||(9952993-9953035)
chr6 (396-469)||(13888520-13888594)
chr6 (396-469)||(2142291-2142364)
chr6 (396-445)||(29698167-29698216)
chr6 (400-469)||(7545645-7545715)
chr6 (423-461)||(9954332-9954370)
[»] chr1 (21 HSPs)
chr1 (396-512)||(39426214-39426330)
chr1 (396-513)||(32887735-32887851)
chr1 (396-508)||(26860010-26860121)
chr1 (424-510)||(35534741-35534825)
chr1 (396-504)||(26372256-26372362)
chr1 (396-504)||(50294026-50294134)
chr1 (396-469)||(5047379-5047452)
chr1 (396-465)||(12151771-12151840)
chr1 (396-504)||(32618805-32618911)
chr1 (408-465)||(7840681-7840738)
chr1 (396-511)||(18976260-18976376)
chr1 (396-504)||(50484390-50484498)
chr1 (400-470)||(24977248-24977318)
chr1 (396-469)||(30077642-30077715)
chr1 (396-515)||(5854799-5854917)
chr1 (396-458)||(24413291-24413353)
chr1 (396-465)||(48327156-48327224)
chr1 (396-469)||(52280037-52280110)
chr1 (449-503)||(49384627-49384680)
chr1 (396-453)||(12380924-12380981)
chr1 (396-453)||(12384991-12385048)
[»] chr2 (28 HSPs)
chr2 (397-510)||(30709115-30709228)
chr2 (396-511)||(4446852-4446967)
chr2 (396-513)||(19908784-19908899)
chr2 (436-511)||(30217517-30217592)
chr2 (396-512)||(31618724-31618838)
chr2 (396-504)||(13238685-13238793)
chr2 (396-504)||(35316829-35316937)
chr2 (396-487)||(15709772-15709862)
chr2 (396-461)||(28564896-28564961)
chr2 (396-508)||(30857638-30857749)
chr2 (442-512)||(30721564-30721632)
chr2 (396-487)||(36929720-36929810)
chr2 (398-511)||(2063359-2063472)
chr2 (396-469)||(8988859-8988932)
chr2 (397-470)||(34512022-34512095)
chr2 (396-469)||(35315286-35315359)
chr2 (396-469)||(38397085-38397158)
chr2 (396-468)||(21454494-21454565)
chr2 (396-469)||(374997-375070)
chr2 (396-465)||(23259489-23259558)
chr2 (328-370)||(6946245-6946287)
chr2 (397-487)||(15722239-15722328)
chr2 (438-504)||(22061433-22061498)
chr2 (400-469)||(19905889-19905958)
chr2 (396-469)||(23459844-23459917)
chr2 (411-511)||(35315521-35315620)
chr2 (396-462)||(4603114-4603180)
chr2 (461-510)||(6946335-6946384)
[»] chr8 (23 HSPs)
chr8 (396-510)||(42761717-42761831)
chr8 (396-513)||(21360280-21360400)
chr8 (396-465)||(30426671-30426740)
chr8 (396-504)||(28069723-28069831)
chr8 (396-504)||(36991360-36991468)
chr8 (396-487)||(18689495-18689585)
chr8 (396-487)||(24557162-24557252)
chr8 (396-469)||(26749546-26749619)
chr8 (396-506)||(42338008-42338117)
chr8 (396-504)||(6014198-6014307)
chr8 (396-467)||(36748492-36748562)
chr8 (396-460)||(10672519-10672583)
chr8 (413-469)||(17520403-17520459)
chr8 (396-513)||(10652571-10652688)
chr8 (400-465)||(40695249-40695314)
chr8 (396-468)||(34612568-34612640)
chr8 (396-511)||(45113274-45113390)
chr8 (423-514)||(37966397-37966487)
chr8 (449-515)||(20169125-20169190)
chr8 (396-461)||(24102020-24102085)
chr8 (396-445)||(28318924-28318973)
chr8 (396-465)||(41511266-41511335)
chr8 (396-445)||(44859189-44859238)
[»] chr5 (28 HSPs)
chr5 (396-504)||(29340999-29341106)
chr5 (396-504)||(35660572-35660680)
chr5 (396-503)||(4895699-4895806)
chr5 (396-504)||(11775797-11775905)
chr5 (396-504)||(18625384-18625492)
chr5 (396-504)||(32129580-32129688)
chr5 (396-504)||(37266735-37266843)
chr5 (397-504)||(43309113-43309220)
chr5 (396-465)||(14349807-14349876)
chr5 (396-469)||(31653039-31653112)
chr5 (396-465)||(40753164-40753233)
chr5 (396-504)||(13032122-13032230)
chr5 (396-487)||(34827196-34827287)
chr5 (396-502)||(39902419-39902525)
chr5 (396-469)||(10362012-10362085)
chr5 (396-469)||(36290606-36290679)
chr5 (396-468)||(2984389-2984461)
chr5 (440-506)||(9460597-9460662)
chr5 (399-469)||(27428879-27428949)
chr5 (396-469)||(3057152-3057225)
chr5 (400-461)||(14688582-14688643)
chr5 (416-469)||(18653385-18653438)
chr5 (396-468)||(31279918-31279990)
chr5 (396-459)||(43222130-43222193)
chr5 (396-450)||(4592804-4592858)
chr5 (477-511)||(21213953-21213987)
chr5 (396-469)||(31546490-31546563)
chr5 (396-469)||(41660110-41660183)
[»] chr7 (33 HSPs)
chr7 (396-504)||(4888471-4888579)
chr7 (422-511)||(47270580-47270668)
chr7 (396-465)||(25084730-25084799)
chr7 (396-509)||(40023215-40023327)
chr7 (396-504)||(9559017-9559125)
chr7 (396-511)||(39855770-39855884)
chr7 (396-465)||(12139330-12139400)
chr7 (396-469)||(32915960-32916033)
chr7 (396-512)||(33450510-33450627)
chr7 (396-469)||(47799898-47799971)
chr7 (396-504)||(7712331-7712438)
chr7 (417-473)||(29844316-29844372)
chr7 (396-503)||(989133-989239)
chr7 (397-511)||(7373872-7373985)
chr7 (396-500)||(7362572-7362676)
chr7 (396-504)||(16366522-16366630)
chr7 (396-504)||(21151156-21151264)
chr7 (396-513)||(47500236-47500354)
chr7 (396-469)||(8149613-8149686)
chr7 (396-465)||(45260429-45260498)
chr7 (396-503)||(29631052-29631156)
chr7 (412-504)||(44647984-44648076)
chr7 (396-467)||(24193597-24193668)
chr7 (396-513)||(18198260-18198377)
chr7 (396-469)||(30588539-30588612)
chr7 (436-504)||(5463867-5463934)
chr7 (400-470)||(19027680-19027751)
chr7 (400-470)||(20726885-20726956)
chr7 (396-499)||(38365659-38365761)
chr7 (408-467)||(46802331-46802390)
chr7 (449-515)||(44390835-44390900)
chr7 (425-482)||(18064588-18064643)
chr7 (396-504)||(47226039-47226145)
[»] chr4 (37 HSPs)
chr4 (396-504)||(19901881-19901989)
chr4 (399-504)||(23610649-23610754)
chr4 (396-504)||(5416429-5416536)
chr4 (408-509)||(36532641-36532741)
chr4 (396-513)||(56558283-56558400)
chr4 (396-508)||(1871281-1871392)
chr4 (396-511)||(56453777-56453891)
chr4 (441-512)||(15178628-15178699)
chr4 (396-470)||(5763159-5763233)
chr4 (396-469)||(56269074-56269147)
chr4 (396-504)||(3952133-3952241)
chr4 (396-504)||(34778425-34778533)
chr4 (417-503)||(5815267-5815350)
chr4 (396-507)||(42844148-42844258)
chr4 (396-469)||(23474115-23474188)
chr4 (396-465)||(24073620-24073689)
chr4 (396-469)||(48914516-48914589)
chr4 (396-504)||(18207003-18207111)
chr4 (396-469)||(5524451-5524524)
chr4 (396-506)||(13493276-13493387)
chr4 (396-461)||(30567905-30567970)
chr4 (441-506)||(33841766-33841830)
chr4 (396-469)||(36688186-36688259)
chr4 (409-509)||(47922324-47922425)
chr4 (396-469)||(50483554-50483627)
chr4 (396-504)||(33247093-33247201)
chr4 (396-504)||(39862521-39862629)
chr4 (396-462)||(33262557-33262623)
chr4 (396-469)||(1015852-1015925)
chr4 (396-504)||(12312438-12312547)
chr4 (396-432)||(46804635-46804671)
chr4 (396-434)||(12241441-12241479)
chr4 (396-462)||(38079725-38079791)
chr4 (433-470)||(5817976-5818013)
chr4 (413-498)||(36003216-36003300)
chr4 (396-469)||(37002249-37002322)
chr4 (396-469)||(42010121-42010194)
[»] scaffold0062 (2 HSPs)
scaffold0062 (396-487)||(58684-58774)
scaffold0062 (397-487)||(70796-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (396-465)||(7151-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (396-469)||(29567-29640)
[»] scaffold0012 (1 HSPs)
scaffold0012 (396-504)||(208067-208175)
[»] scaffold0035 (1 HSPs)
scaffold0035 (396-465)||(16399-16468)
[»] scaffold0008 (1 HSPs)
scaffold0008 (396-465)||(9203-9272)
[»] scaffold0171 (1 HSPs)
scaffold0171 (396-462)||(17311-17377)
[»] scaffold0126 (1 HSPs)
scaffold0126 (396-459)||(22450-22513)


Alignment Details
Target: chr3 (Bit Score: 490; Significance: 0; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 499 - 1056
Target Start/End: Complemental strand, 34897940 - 34897379
Alignment:
Q  499 aggatcctaacccctctcacccacctctattacatgttgacttggattccaacaaattctccaaaaacaaaacagtttttacaatgatattttctatttg 598  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34897940 aggatcctaacccctctcacccacctcaattacatgttgacttggattccgacaaattctccaaaaacaaaacagtttttacaatgatattttctatttg 34897841  T
Q  599 tatcaaaattatagttctaccgaacaaaacggtattgaagatgtccacttctannnnnnnn-atcagctgatttgtccatttctacaacatttaagaaat 697  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  34897840 tatcaaaattatagttctaccgaacaaaacggtattgaagatgtccacttctatttttttttatcagctgatttgtccatttctacaacatttaagaaat 34897741  T
Q  698 ggagagagggtttttatatcatctctcctattcctcctctccccacaccgaactcatgtcccaatgatgcctttt-ataatatagtaaattatatttaaa 796  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34897740 ggagagagggtttttatatcatctctcctattcctcctctccccacaccgaactcatgtcccaatgatgcctttttataatatagtaaattatatttaaa 34897641  T
Q  797 atacagtaaattactataagatgccttttatatagtaaatctcacctatctctcctatttctctatttcgttatttatatattt-aaaatatagtaaatc 895  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34897640 atacagtaaattactataagatgccttttatatagtaaatctcacctatctctcctatttctctatttcgttatttatatatttaaaaatatagtaaatc 34897541  T
Q  896 actacaagatgcctttttaccgtgcacaacaagcgaatgagtgattacattacatcttcatgc-tttttatagtcttaggatagaaacatgcattttcta 994  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  34897540 actacaagatgcctttttaccgtgcacaacaagcgaatgagtgattacattacatcttcatgcttttttatagtcttgggataaaaacatgcattttcta 34897441  T
Q  995 agcataaagtcacgaaccattgatgtgtaaccctctctacgaagctaaagttagcattgatg 1056  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34897440 agcataaagtcacgaaccattgatgtgtaaccctctctacgaagctaaagttagcattgatg 34897379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 52 - 347
Target Start/End: Complemental strand, 34898322 - 34898023
Alignment:
Q  52 agaaaaatacaaatcaacggtccaaaatacaaccaaacctatctaagcata----caatcaaatggatatgtaaaccattcatacaataggcaaaaggga 147  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  34898322 agaaaaatacaaatcaaccgtccaaaatacaaccaaacctatctaagcatatatacaatcaaatggatatgtaaaccattcatacaataggcaaaaggga 34898223  T
Q  148 tcatttacatcaaatatatttgttcttggtcaaatgcttaatccgcatgatattccttcgtttacaacgtaagatccagtgagtcgtcaaactcaatatt 247  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |    
T  34898222 tcatttacatcaaatatatttgttcttggtcaaatgctcaatccgcatgatattccttcgtttacaacgtaagattcagtgagtcatcaaactcaatact 34898123  T
Q  248 atacatcttacgtctatataagggacatgttactaccaatcaagatatgttcattcattcactcaatacctcccactcgagtcaagatcttctccatttt 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34898122 atacatcttacgtctatataagggacatgttactaccaatcaagatatgttcattcattcactcaatacctcccactcgagtcaagatcttctccatttt 34898023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 396 - 521
Target Start/End: Original strand, 1995448 - 1995573
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||| ||| |||||| ||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||||||| || |||||    
T  1995448 taattaatgatggtgagactcacttattggtaggactcattatctattttctatgtctatctctcttcaaattgtgtacttccatttatttgataaaatg 1995547  T
Q  496 aagaggatcctaacccctctcaccca 521  Q
    |||||||||||||||| | |||||||    
T  1995548 aagaggatcctaacccatgtcaccca 1995573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 436 - 510
Target Start/End: Original strand, 52859272 - 52859346
Alignment:
Q  436 tatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 510  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| |||||||| |||||    
T  52859272 tatctattttatgtgtctatctctctctaaattgtgtattttcatttattttatcaaatggagaggatcataacc 52859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 19830502 - 19830394
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||| |||| |||| |||   |  ||||||||||||  ||||||    
T  19830502 taattaatgatggtgggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatg 19830403  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  19830402 gagaggatc 19830394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 27033655 - 27033763
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||| ||||||| ||||||||||||  ||||||||  ||||||||||||||||||| |||   |  ||||||||||||||||||||    
T  27033655 taattaatgatggtgggatccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatg 27033754  T
Q  496 aagaggatc 504  Q
     ||| ||||    
T  27033755 gagatgatc 27033763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 43720018 - 43719910
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||||||||||| |||   |  |||||||||||| | |||||    
T  43720018 taattaatgatggtgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatg 43719919  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  43719918 gagaggatc 43719910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 506
Target Start/End: Complemental strand, 10474509 - 10474400
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||| | |||| || |||||||| |||||| |||||||||||||||||||||||| |||||| ||||||  ||| |||||||||| | ||||||     
T  10474509 taattaatgttggtggaactcacttaatagtaggatccattatctattttatgtgtctatatctctcaaaattgcatac-tccatttattatgtcaaata 10474411  T
Q  496 aagaggatcct 506  Q
     ||||||||||    
T  10474410 gagaggatcct 10474400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 2229987 - 2230056
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||| | ||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  2229987 taattaatgatggtggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaa 2230056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 34899975 - 34899930
Alignment:
Q  7 atctcaacttgaaagttgaaactaccaaactttacctatatgcata 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34899975 atctcaacttgaaagttgaaactaccaaactttacctatatgcata 34899930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 29586340 - 29586447
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||| |||||||||||| ||| |||  | ||||||||||||||||||||||||||||||| ||  ||| |||||||||| |   |||||    
T  29586340 taattaatgatggtgagacccacttaatagtaagacttactatctattttatgtgtctatctctctccaaactgcatac-tccatttattatgctaaatg 29586438  T
Q  496 aagaggatc 504  Q
    |||||||||    
T  29586439 aagaggatc 29586447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 44637950 - 44638052
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaaga 499  Q
    |||||| ||| ||||| ||||||| |||||  ||| |||||||||||||||| |||||||||| ||||||  ||| |||||||||||| |||||||| ||    
T  44637950 taatgacagtaggacctacttaatagtagggtccactatctattttatgtgtttatctctctcaaaattgcatac-tccatttattttgtcaaatgatga 44638048  T
Q  500 ggat 503  Q
    ||||    
T  44638049 ggat 44638052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 54911658 - 54911732
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 470  Q
    ||||||||||| |||| || || |||||||||||||||| || ||||||||||| ||||||||||| ||||||||    
T  54911658 taattaatgatggtggaactcatttaatggtaggacccactacctattttatgtctctatctctcttcaaattgt 54911732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 33632827 - 33632899
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||| | ||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  33632827 taattaatgat-gtggaatccatttaatagtaggatccactatctattttatgtgtctatctctctccaaattg 33632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 34373835 - 34373904
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||| | ||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  34373835 taattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaa 34373904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 408 - 504
Target Start/End: Original strand, 24754673 - 24754769
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 504  Q
    |||||||||||||| |||||||||  |  ||||||||| ||||||||||||||||||| ||||  |  ||||||||||||  |||||| ||||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatc 24754769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 408 - 504
Target Start/End: Original strand, 24763670 - 24763766
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 504  Q
    |||||||||||||| |||||||||  |  ||||||||| ||||||||||||||||||| ||||  |  ||||||||||||  |||||| ||||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatc 24763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 511
Target Start/End: Original strand, 48084823 - 48084939
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||| ||||||||   |  || |||||||||| |||||    
T  48084823 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaat 48084922  T
Q  495 gaagaggatcctaaccc 511  Q
    | |||||||| ||||||    
T  48084923 ggagaggatcttaaccc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 34373656 - 34373593
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 459  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||||||  ||||||||||||    
T  34373656 taattaatgatggtgggacccacttagtggtaggacccaccatctatttttagtgtctatctct 34373593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 31523739 - 31523666
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| |  |||||||||  |  |||||| |||||||||||||||||||||||    
T  31523739 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattg 31523666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 51982656 - 51982549
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  | | || ||||||||| ||| ||||| || ||||||||||| |||||||||||||||||||  | ||||||||||||||   |||||    
T  51982656 taattaatgatgatagaactcacttaatgatagaacccactaactattttatgtatctatctctctccaaattgcat-cttccatttatttttataaatg 51982558  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  51982557 gagaggatc 51982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 437 - 506
Target Start/End: Complemental strand, 30235484 - 30235416
Alignment:
Q  437 atctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcct 506  Q
    ||||||||| | ||||||||||||| |||||||  |||| |||||||||||| |||||||||| ||||||    
T  30235484 atctattttttatgtctatctctcttcaaattgcatact-ccatttattttaacaaatgaagatgatcct 30235416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 504
Target Start/End: Original strand, 40851781 - 40851886
Alignment:
Q  399 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaag 498  Q
    |||||||| || ||||||||||| |||| | |||||  ||||||||| ||||||||||| ||||||| |||   |  |||||||||||| ||||||  ||    
T  40851781 ttaatgatggtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgag 40851880  T
Q  499 aggatc 504  Q
    ||||||    
T  40851881 aggatc 40851886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 42613084 - 42613157
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| | ||||||||||||| |||||||    
T  42613084 taattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaattg 42613157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 46167397 - 46167466
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    |||||||| || || ||| ||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  46167397 taattaataatggtaggatccacttagtggtaggacccaccatatattttttgtgtctatctctctccaa 46167466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 49679341 - 49679268
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||| ||| || ||||||||   |  |||||| |||||||||||||||||||||||    
T  49679341 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattg 49679268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 25285907 - 25285843
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 461  Q
    |||| ||||| ||||| | || |||||| ||||| ||| ||||||||||||||||||||||||||    
T  25285907 aattgatgatggtgggtctcatttaatgataggatccactatctattttatgtgtctatctctct 25285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 47750361 - 47750274
Alignment:
Q  411 ggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaaga 499  Q
    |||| ||||||||| || ||| | ||||||||||| ||||| ||| ||||| |||||||| ||| | |||||||||| |||||||||||    
T  47750361 ggactcacttaatgataagactctttatctattttttgtgtttatgtctcttcaaattgtatacct-catttattttgtcaaatgaaga 47750274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 550875 - 550814
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||||||||| ||||| |||  ||||||||| ||| | ||||| |||||||||||    
T  550875 gtgggacccacttaatgataggatccaccatctattttttgtatatatctttctccaaattg 550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 1e-44; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 396 - 512
Target Start/End: Complemental strand, 7215923 - 7215807
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7215923 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatg 7215824  T
Q  496 aagaggatcctaacccc 512  Q
     ||||||| ||||||||    
T  7215823 gagaggatactaacccc 7215807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 396 - 512
Target Start/End: Complemental strand, 2800682 - 2800566
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||| |||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  2800682 taatcaatgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaattgtgtatttccattaattttatcaaatg 2800583  T
Q  496 aagaggatcctaacccc 512  Q
     ||||||||||||||||    
T  2800582 gagaggatcctaacccc 2800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 4804452 - 4804569
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| ||||  |  ||||||||||||  ||||||    
T  4804452 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatg 4804551  T
Q  496 aagaggatcctaacccct 513  Q
     |||||||| | ||||||    
T  4804552 gagaggatcttcacccct 4804569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 7162088 - 7162196
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| | ||||||||||  ||||||||  ||||||||||||||||||| |||   |  ||||||||||||||||||||    
T  7162088 taattaatgatggtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatg 7162187  T
Q  496 aagaggatc 504  Q
     ||| ||||    
T  7162188 gagatgatc 7162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 21159440 - 21159332
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||| ||||||||| |||   |  | ||||||||||| ||||||    
T  21159440 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatg 21159341  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  21159340 gagaggatc 21159332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 27826542 - 27826608
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 462  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||    
T  27826542 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctc 27826608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 17828639 - 17828532
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||| ||||  ||||| ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||  ||| |||| ||||| || ||||||    
T  17828639 taattattgatgatgggatccacttaatagtagaatccactatctattttatgtgtctatctctctccaaattgcatac-tccaattattataccaaatg 17828541  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  17828540 tagaggatc 17828532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 17944166 - 17944274
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||| ||| |||||||||| |  ||||||||| ||||||||||||||||||| ||    |  ||||||||||||  ||||||    
T  17944166 taattaatgatggtgggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatg 17944265  T
Q  496 aagaggatc 504  Q
    |||||||||    
T  17944266 aagaggatc 17944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 12412641 - 12412710
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||| ||||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  12412641 taattaatgatggtggaacccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaa 12412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 13089820 - 13089751
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| ||||| |||||||| ||||||||||||  |||||| || |||||||||||||||||||    
T  13089820 taattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaa 13089751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 408 - 502
Target Start/End: Original strand, 23936269 - 23936365
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtcta--tctctctccaaattgtgtacttccatttattttatcaaatgaagagga 502  Q
    ||||||||||||||||||||| | ||  |||| || |||||||||||  ||||||||| |||||||||||| |||| | ||||||||||| ||||||    
T  23936269 gtgggacccacttaatggtagaatccgctatccatcttatgtgtctatctctctctccgaattgtgtactttcattcaatttatcaaatggagagga 23936365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 24484883 - 24484956
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| |||||||||||||||||||||||    
T  24484883 taattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattg 24484956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 227635 - 227526
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||| ||||||  ||||| ||||||| ||||||||||||  ||||||| || |||||||||||||||||||| ||   |  ||||||||||||| |||||    
T  227635 taatcaatgatgatgggatccacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaat 227536  T
Q  495 gaagaggatc 504  Q
    | ||||||||    
T  227535 ggagaggatc 227526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 32254102 - 32254031
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 467  Q
    ||||||||||||||||||| ||||||||| |||||||||  | || |||| | |||||||||| ||||||||    
T  32254102 taattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaaat 32254031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 1249217 - 1249150
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||  | ||||| |||||||||||    
T  1249217 taattaatgatggtgggacccacttagtggtaggacccaccatctattt--tttgtctgtctctctccaa 1249150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 9953035 - 9952993
Alignment:
Q  469 gtgtacttccatttattttatcaaatgaagaggatcctaaccc 511  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  9953035 gtgtacttccatttattttatcaaatggagaggatcttaaccc 9952993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 13888594 - 13888520
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattg 469  Q
    |||||||||||  ||||||||| |||||||||||| |||  ||||||| || ||||| |||||||||||||||||    
T  13888594 taattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattg 13888520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 2142364 - 2142291
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||| |||||| ||||| | |||||||  |  |||||| |||||||||||||||||||||||    
T  2142364 taattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattg 2142291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 29698167 - 29698216
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatttt 445  Q
    ||||||||||| ||||||||||||||||||||||| |||  |||||||||    
T  29698167 taattaatgatggtgggacccacttaatggtaggatccaccatctatttt 29698216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 7545645 - 7545715
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaattg 469  Q
    |||||||||||||| ||||||| || |||||||||  |  |||||| | ||||||||||||||||||||||    
T  7545645 taatgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaaattg 7545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 423 - 461
Target Start/End: Complemental strand, 9954370 - 9954332
Alignment:
Q  423 tggtaggacccattatctattttatgtgtctatctctct 461  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  9954370 tggtgggacccactatctattttatgtgtctatctctct 9954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 1e-44; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 396 - 512
Target Start/End: Original strand, 39426214 - 39426330
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39426214 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 39426313  T
Q  496 aagaggatcctaacccc 512  Q
     ||| ||| ||||||||    
T  39426314 gagatgatactaacccc 39426330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 32887851 - 32887735
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  32887851 taattaatgatggtgggacccatttaatggtaggatccactatttattttatgtgtctatctttctctaaactgtgtac-tccatttattttatcaaatg 32887753  T
Q  496 aagaggatcctaacccct 513  Q
    ||||||||||||| ||||    
T  32887752 aagaggatcctaatccct 32887735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 396 - 508
Target Start/End: Complemental strand, 26860121 - 26860010
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||| ||||||| || ||||||| | |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||     
T  26860121 taattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctctcttcaaattatgtac-tccatttattttatcaaata 26860023  T
Q  496 aagaggatcctaa 508  Q
     ||| ||||||||    
T  26860022 gagatgatcctaa 26860010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 35534825 - 35534741
Alignment:
Q  424 ggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 510  Q
    ||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  35534825 ggtaggatccactatctattttatgtgtctatctctct--aaattgtgtacttccatttattttatcaaatggagaggatactaacc 35534741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 26372256 - 26372362
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||| | ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||  ||||| | |||||||||||||||||||||||     
T  26372256 taattaatggtggtgggacccacttaatggtaggatctattgtctattttacgtgtctatctctct--aaattatctacttccatttattttatcaaatt 26372353  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  26372354 gagaggatc 26372362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 50294134 - 50294026
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| || ||| ||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  50294134 taattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 50294035  T
Q  496 aagaggatc 504  Q
    |||||||||    
T  50294034 aagaggatc 50294026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 5047452 - 5047379
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||||||||||| || |||||||| |||||||||||||||||  || ||||||||||||||||    
T  5047452 taattaatgatggtgggacccacatagtggtaggatccattatctattttatgcatcaatctctctccaaattg 5047379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 12151771 - 12151840
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  12151771 taattaatgatggtgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaa 12151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 32618805 - 32618911
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||| ||||||| |||||| ||| |||||| ||||| |||| ||||||||||||||||  ||| |||||||||| |  ||||||    
T  32618805 taattaatgatggtgggacctacttaatagtaggatccactatcta-tttatatgtccatctctctccaaattggatac-tccatttattatgccaaatg 32618902  T
Q  496 aagaggatc 504  Q
    |||||||||    
T  32618903 aagaggatc 32618911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 7840738 - 7840681
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||    
T  7840738 gtgggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaa 7840681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 18976376 - 18976260
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||  ||||||| |||||||||| ||| |||  ||||||| || |||||||||||||||||||||||   |  || |||||||||| |||||    
T  18976376 taattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaat 18976277  T
Q  495 gaagaggatcctaaccc 511  Q
    | |||||||| ||||||    
T  18976276 ggagaggatcttaaccc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 50484390 - 50484498
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||  |||||||||||||| |||| | |||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  50484390 taattaatgacggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 50484489  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  50484490 gagaggatc 50484498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 24977248 - 24977318
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 470  Q
    ||||||| |||| ||||||||| |||||||| |||  ||||||||| |||||||||||||||| |||||||    
T  24977248 taatgattgtggaacccacttagtggtaggatccaccatctattttttgtgtctatctctctctaaattgt 24977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 30077715 - 30077642
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||||||||||| |||||| || ||| |||||  |  |||||| |||||||||||||||||||||||    
T  30077715 taattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattg 30077642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 5854917 - 5854799
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  ||||| ||| || ||||||||| ||| | || | ||| | ||||||||||| | |||||||| ||| |||||||||| | |||||||    
T  5854917 taattaatgatgatgggatccattttatggtaggatccactctcaaatttttatgtctatctcttttcaaattgtatac-tccatttattctttcaaatg 5854819  T
Q  496 aagaggatcctaacccctct 515  Q
     |||||||| ||||||||||    
T  5854818 tagaggatcataacccctct 5854799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 24413353 - 24413291
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctc 458  Q
    ||||||||||| |||||||||| |||||| |||||||||  ||| ||||| ||||||||||||    
T  24413353 taattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatctc 24413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 48327224 - 48327156
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||| ||||||||| ||||||||| ||  ||||||||| | |||||||||||||||||    
T  48327224 taattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttgtctatctctctccaa 48327156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 52280110 - 52280037
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||| ||||||| || |||||||||  |  |||||| | |||||||||||||||||||||    
T  52280110 taattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattg 52280037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 49384680 - 49384627
Alignment:
Q  449 tgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggat 503  Q
    |||||||||||||| ||||||| || |||||||||||||| |||||| |||||||    
T  49384680 tgtctatctctctctaaattgtata-ttccatttattttaacaaatggagaggat 49384627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 12380981 - 12380924
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtct 453  Q
    ||||||||||| ||||||| |||||| |||||| |||||  ||||||||| |||||||    
T  12380981 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 12385048 - 12384991
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtct 453  Q
    ||||||||||| ||||||| |||||| |||||| |||||  ||||||||| |||||||    
T  12385048 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 9e-36; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 397 - 510
Target Start/End: Original strand, 30709115 - 30709228
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatga 496  Q
    |||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||     
T  30709115 aattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaaattgtgtactttcattgattttataagatgg 30709214  T
Q  497 agaggatcctaacc 510  Q
    ||||||||||||||    
T  30709215 agaggatcctaacc 30709228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 4446967 - 4446852
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||||||  ||||| ||| |||||||| ||| |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  4446967 taattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccatttattttatcaaatg 4446868  T
Q  496 aagaggatcctaaccc 511  Q
     ||||||| |||||||    
T  4446867 gagaggatactaaccc 4446852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 19908784 - 19908899
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||||  ||||||| || ||||||||||||||||||||||| ||||||||||  ||| |||||||||| |||||||||    
T  19908784 taattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgcatac-tccatttattatatcaaatg 19908881  T
Q  496 aagaggatcctaacccct 513  Q
    ||||||||| | ||||||    
T  19908882 aagaggatctttacccct 19908899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 30217517 - 30217592
Alignment:
Q  436 tatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaaccc 511  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||  |||||||||||||||    
T  30217517 tatctattttatgtgtctatctcactctaaattgtgtgcttccatttattttatcaaatagagaggatcctaaccc 30217592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 396 - 512
Target Start/End: Complemental strand, 31618838 - 31618724
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||||||| ||||||||| || ||| || |||||||||||| | ||||||| |||||||||||| ||| |||||||  |||||||||||    
T  31618838 taattaatgattgtgggactcacttaatgatatgactcactatctattttatatatctatctttctccaaattgtatac-tccattt-ctttatcaaatg 31618741  T
Q  496 aagaggatcctaacccc 512  Q
     ||||||||||||||||    
T  31618740 gagaggatcctaacccc 31618724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 13238685 - 13238793
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||  ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  13238685 taattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 13238784  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  13238785 gagaggatc 13238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 35316829 - 35316937
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| |||||||| |||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  35316829 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 35316928  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  35316929 gagaggatc 35316937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 15709772 - 15709862
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||  || |||||||||||||    
T  15709772 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcata-ttccatttatttt 15709862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 461
Target Start/End: Original strand, 28564896 - 28564961
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 461  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||    
T  28564896 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctct 28564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 508
Target Start/End: Complemental strand, 30857749 - 30857638
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||| || ||| ||||| |||||| |||||||||||||| |||||||| |||||| ||||||   ||| |||||||||||| | |||||    
T  30857749 taattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctctcttcaaattacatac-tccatttattttgtgaaatg 30857651  T
Q  496 aagaggatcctaa 508  Q
     ||||||||||||    
T  30857650 gagaggatcctaa 30857638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 442 - 512
Target Start/End: Complemental strand, 30721632 - 30721564
Alignment:
Q  442 ttttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccc 512  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||||| || ||||| |||||||    
T  30721632 ttttatgtgtctatctctc--caaattgtgtacttctatttattttatcaaatggagcggatcttaacccc 30721564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 36929720 - 36929810
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    ||||||||||| | || | ||| ||||||||||||| || || |||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  36929720 taattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaaattgcatac-tccatttatttt 36929810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 398 - 511
Target Start/End: Original strand, 2063359 - 2063472
Alignment:
Q  398 attaatgatagtgggacccacttaatggtaggacccatt-atctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatga 496  Q
    ||||||||| |||| ||||||||  |||||||||| |   ||||||||| |||||||||||||||||||||||   || || ||||||||| ||||||||    
T  2063359 attaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgcaaac-tctatttattttgtcaaatga 2063457  T
Q  497 agaggatcctaaccc 511  Q
    |||||||| ||||||    
T  2063458 agaggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 8988859 - 8988932
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || ||||||| || |  |||||| |||||||||||||||||||||||    
T  8988859 taattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattg 8988932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 34512095 - 34512022
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 470  Q
    |||||||||| ||| |||| ||||||| |||  ||||| |||||||||||||||||||||| ||||||||||||    
T  34512095 aattaatgattgtgagacctacttaatagtataacccactatctattttatgtgtctatctttctccaaattgt 34512022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 35315359 - 35315286
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    |||||||| || ||||||| || ||||| ||| || |||||||||||||||||||||||||||||| |||||||    
T  35315359 taattaataatggtgggactcaattaatagtaagatccattatctattttatgtgtctatctctcttcaaattg 35315286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 38397085 - 38397158
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    |||||| |||| ||||||| |||||||| |||| ||||| |||||||||||| ||||||||||||| |||||||    
T  38397085 taattattgatggtgggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaattg 38397158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 21454565 - 21454494
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 468  Q
    ||||||||||| |||| ||||||||||||||| ||||||  ||||||||| |||||||||||||||| |||||    
T  21454565 taattaatgatggtggaacccacttaatggtatgacccacaatctatttt-tgtgtctatctctctctaaatt 21454494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 374997 - 375070
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| |  |||||||||  |  |||||| |||||||||||||||||||||||    
T  374997 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattg 375070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 23259558 - 23259489
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||| ||||||| | ||||||||||  | ||||||| |||||||||||||||||||    
T  23259558 taattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaa 23259489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 6946245 - 6946287
Alignment:
Q  328 gtcaagatcttctccattttttcatttggagagatatagactc 370  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  6946245 gtcaagatcttcttcattttttaatttggagagatatagactc 6946287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 15722239 - 15722328
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    |||||||||| |||| ||||| ||||||||||||   | |||||||||||| ||| ||||||| |||||||||  || |||||||||||||    
T  15722239 aattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaattgcata-ttccatttatttt 15722328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 438 - 504
Target Start/End: Complemental strand, 22061498 - 22061433
Alignment:
Q  438 tctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 504  Q
    |||||||||||||||||||||||| |||||||  ||||| |||||||||| ||||||  ||||||||    
T  22061498 tctattttatgtgtctatctctcttcaaattgcatactt-catttattttgtcaaattgagaggatc 22061433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 19905889 - 19905958
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||| ||||||| ||||||||  || | ||||  |||||||||||||||||||||||||| ||||||    
T  19905889 taatgatggtgggactcacttaataatatgtcccaccatctattttatgtgtctatctctctcaaaattg 19905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 23459917 - 23459844
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||| ||| || ||||||||   |  |||||| |||||||||||||||||||||||    
T  23459917 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattg 23459844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 35315521 - 35315620
Alignment:
Q  411 ggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 510  Q
    |||| ||||||||| |||||||||  | ||||| | ||||| |||||||||||||||||  | ||||||||||||||   ||||| |||||||| |||||    
T  35315521 ggactcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcat-cttccatttatttttataaatggagaggatcttaacc 35315619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 4603180 - 4603114
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 462  Q
    ||||||||||| ||||||||||  ||||||||| || |||||| |||| | | ||||||||||||||    
T  4603180 taattaatgatggtgggacccatctaatggtagaactcattatatattgtctatgtctatctctctc 4603114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 461 - 510
Target Start/End: Original strand, 6946335 - 6946384
Alignment:
Q  461 tccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 510  Q
    ||||||||||| | || ||||||||||||||||||  |||||||||||||    
T  6946335 tccaaattgtgcattttcatttattttatcaaatggggaggatcctaacc 6946384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 396 - 510
Target Start/End: Original strand, 42761717 - 42761831
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  ||| ||||||| | |||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || ||    
T  42761717 taattaatgatgatggaacccactgagtggtaggatccactatctattttatgtgtctatctctcttcaaattgcgtacttccatttattttattaagtg 42761816  T
Q  496 aagaggatcctaacc 510  Q
    |||||||||||||||    
T  42761817 aagaggatcctaacc 42761831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 21360280 - 21360400
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgta----cttccatttattttatca 491  Q
    |||||||| || |||||  ||||||||||||| || | ||||||||| |||||||| |||||||||||||||| ||||    |||| |||||||||||||    
T  21360280 taattaataatggtggggtccacttaatggtatgatctattatctatattatgtgtttatctctctccaaattatgtatgtacttc-atttattttatca 21360378  T
Q  492 aatgaagaggatcctaacccct 513  Q
    |||| |||||||||||||||||    
T  21360379 aatggagaggatcctaacccct 21360400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 30426740 - 30426671
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  30426740 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 30426671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 28069723 - 28069831
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| ||||||||||| |||   |  ||||||||||||  ||||||    
T  28069723 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 28069822  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  28069823 gagaggatc 28069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 36991360 - 36991468
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||||||  | ||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  36991360 taattaatgatggtgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatg 36991459  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  36991460 gagaggatc 36991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 18689495 - 18689585
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||  || |||||||||||||    
T  18689495 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcata-ttccatttatttt 18689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 24557252 - 24557162
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    |||||||||||  |||||| |||||||||||||||||||||| ||||||||||| | ||||||| |||||||||  | ||||||||||||||    
T  24557252 taattaatgatgatgggactcacttaatggtaggacccattacctattttatgtctatatctctttccaaattgcat-cttccatttatttt 24557162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 26749619 - 26749546
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||||||| |  |||||| |||||||||||||||||||||||    
T  26749619 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattg 26749546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 396 - 506
Target Start/End: Complemental strand, 42338117 - 42338008
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| | ||||| |||||||| |||  | ||| |||||||||||  ||| ||| |||||||||||| | |||||  |||||||||||||||||    
T  42338117 taattaatgatggagggacacacttaatagtacaatccactatctattttacatgtatatatctctccaaattatatactta-atttattttatcaaatg 42338019  T
Q  496 aagaggatcct 506  Q
    |||||||||||    
T  42338018 aagaggatcct 42338008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 6014198 - 6014307
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||| | ||| |||||||||||||||||| || ||||||| || ||||||||||| |||||||||||   |  || |||||||||| |||||    
T  6014198 taattaatgataataggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctatttattttagcaaat 6014297  T
Q  495 gaagaggatc 504  Q
    | ||||||||    
T  6014298 ggagaggatc 6014307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 36748562 - 36748492
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 467  Q
    ||||||||||| |||||| |||||||||||||||||||  | |||||||| ||||||||||| |||||||||    
T  36748562 taattaatgatggtgggatccacttaatggtaggacccgctgtctatttt-tgtgtctatctatctccaaat 36748492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 10672583 - 10672519
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctc 460  Q
    ||||||||||| ||||||| |||||| |||||||| |||  ||||||||| ||||||||||||||    
T  10672583 taattaatgatggtgggactcacttagtggtaggatccaccatctattttttgtgtctatctctc 10672519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 17520403 - 17520459
Alignment:
Q  413 acccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||||||| |  |||||||||||||||||||| |||||||||||||    
T  17520403 acccacttaatagtaggactcgctatctattttatgtgtctatatctctccaaattg 17520459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 10652688 - 10652571
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||| ||| | ||| ||||||  ||| ||||| ||| ||||||||||||||| |||   |   |||||||||||| ||||||    
T  10652688 taattaatgatggtgggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatg 10652589  T
Q  496 aagaggatcctaacccct 513  Q
     |||||||| | ||||||    
T  10652588 gagaggatcttcacccct 10652571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 40695314 - 40695249
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||| |||| || |||||| |||||||||| |  ||||||||| |||||||||||||||||||    
T  40695314 taatgatggtggaactcacttagtggtaggacctaccatctattttttgtgtctatctctctccaa 40695249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 468
Target Start/End: Original strand, 34612568 - 34612640
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 468  Q
    ||||||||||| ||| |||||||||| || |||||||||  |  |||||| |||||||||||||||| |||||    
T  34612568 taattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctctaaatt 34612640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 511
Target Start/End: Original strand, 45113274 - 45113390
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||  |||||| |||||| |||| |||||||  ||||||| || ||||||||| |||||||||||||   |   | |||||||||| |||||    
T  45113274 taattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaat 45113373  T
Q  495 gaagaggatcctaaccc 511  Q
    | |||||||| ||||||    
T  45113374 ggagaggatcttaaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 514
Target Start/End: Complemental strand, 37966487 - 37966397
Alignment:
Q  423 tggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccctc 514  Q
    |||||||||| |  ||||||||| ||||| ||||||||| |||||||   | |||||||||||||  |||||| |||||||| |||||||||    
T  37966487 tggtaggacctacaatctattttttgtgtttatctctcttcaaattgcaaa-ttccatttattttgccaaatggagaggatcttaacccctc 37966397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 449 - 515
Target Start/End: Original strand, 20169125 - 20169190
Alignment:
Q  449 tgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccctct 515  Q
    |||||||||||||||||||||  | ||||||||||||||   ||||| |||||||| ||||||||||    
T  20169125 tgtctatctctctccaaattgcat-cttccatttatttttataaatggagaggatcttaacccctct 20169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 461
Target Start/End: Original strand, 24102020 - 24102085
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 461  Q
    ||||||||||| |||| || |||||| |||||||| |||  ||||||||| | |||||||||||||    
T  24102020 taattaatgatggtggaactcacttagtggtaggatccaccatctattttttatgtctatctctct 24102085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 28318973 - 28318924
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatttt 445  Q
    ||||||||||| || ||||||||||| |||||||||||| ||||| ||||    
T  28318973 taattaatgatggttggacccacttagtggtaggacccactatctttttt 28318924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 41511266 - 41511335
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||| | ||||||| || ||||||||| |||||||||| | | ||||||||| |||||    
T  41511266 taattaatgatggtggaaaccacttagtgataggacccactatctattttttatatctatctctttccaa 41511335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 44859238 - 44859189
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatttt 445  Q
    ||||||||||| |||||||||||||| |||||| |||||  |||||||||    
T  44859238 taattaatgatggtgggacccacttagtggtagaacccaccatctatttt 44859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 5e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 29340999 - 29341106
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||  ||| |||||||||| || ||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgcatac-tccatttattataccaaatg 29341097  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  29341098 gagaggatc 29341106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 35660680 - 35660572
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  35660680 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 35660581  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  35660580 gagaggatc 35660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 396 - 503
Target Start/End: Complemental strand, 4895806 - 4895699
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  |||||     
T  4895806 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaata 4895707  T
Q  496 aagaggat 503  Q
    ||||||||    
T  4895706 aagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 11775797 - 11775905
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||  |||||||||||||| |||||||| |||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||| ||||||    
T  11775797 taattaatgacggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatg 11775896  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  11775897 gagaggatc 11775905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 18625492 - 18625384
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| ||||||||||| |||   |  ||||||||||||  ||||||    
T  18625492 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 18625393  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  18625392 gagaggatc 18625384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 32129688 - 32129580
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||||||  |||||||||||||||||| || |  |  ||||||||||||  ||||||    
T  32129688 taattaatgatggtgggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttgccaaatg 32129589  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  32129588 gagaggatc 32129580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 37266735 - 37266843
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  37266735 taattaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 37266834  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  37266835 gagaggatc 37266843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 43309113 - 43309220
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatga 496  Q
    |||||||||| |||| ||||| ||||||||| || ||| |||||||||| | ||||||||||||||||| |||   |  ||||||||||||||||||| |    
T  43309113 aattaatgatggtggaacccatttaatggtaagatccactatctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataa 43309212  T
Q  497 agaggatc 504  Q
    ||||||||    
T  43309213 agaggatc 43309220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 14349807 - 14349876
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  14349807 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaa 14349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 31653039 - 31653112
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||| ||| |||||||| ||||||| |  |||||||||||||||| |||||||||||||||||    
T  31653039 taattaatgattgtgagactcacttaatagtaggactcgctatctattttatgtgtttatctctctccaaattg 31653112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 40753233 - 40753164
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||||    
T  40753233 taattaatgatggtgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaa 40753164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 13032122 - 13032230
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||| ||| ||||||||| ||  ||||||||  ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  13032122 taattaatgatggtgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 13032221  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  13032222 gagaggatc 13032230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 34827196 - 34827287
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    ||||||| ||| |||||||||||||| |||||||| |||  ||||||||| | ||||||||||||||||| |||  ||  ||||||||||||    
T  34827196 taattaaagatggtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttatttt 34827287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 396 - 502
Target Start/End: Original strand, 39902419 - 39902525
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||| | ||| ||| ||||||||||||  ||||||||  ||||| ||||||||||||| ||||  |  |||||||||||| |||||||    
T  39902419 taattaatgatggtggaatccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatg 39902518  T
Q  496 aagagga 502  Q
     ||||||    
T  39902519 gagagga 39902525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 10362085 - 10362012
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||  ||| ||||||||||||||||||| ||| || | ||||||||| ||||||||||||| |||||    
T  10362085 taattaatgacggtgagacccacttaatggtaggatccactaccaattttatgtctctatctctctcctaattg 10362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 36290606 - 36290679
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||| ||||||| || |||||||||  |  |||||| |||||||||||||||||||||||    
T  36290606 taattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattg 36290679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 2984461 - 2984389
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 468  Q
    ||||||||||| |||||||||| ||| || |||||  ||| |  |||||||||||||||||||||||||||||    
T  2984461 taattaatgatggtgggacccatttagtgataggattcatcacttattttatgtgtctatctctctccaaatt 2984389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 9460662 - 9460597
Alignment:
Q  440 tattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcct 506  Q
    |||| |||||||||||||||||||||||||  ||| || |||||||||| |||||| ||||||||||    
T  9460662 tattatatgtgtctatctctctccaaattgcatac-tctatttattttaccaaatggagaggatcct 9460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 27428949 - 27428879
Alignment:
Q  399 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    |||||||| |||| || |||||||||||||||  ||  ||||||||| ||||||||||||| |||||||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattg 27428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 3057225 - 3057152
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    |||||||||||  || ||| ||||||||||||||| |||  ||||||||| ||||| ||||||| |||||||||    
T  3057225 taattaatgattatgtgactcacttaatggtaggatccaccatctattttttgtgtttatctctatccaaattg 3057152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 14688582 - 14688643
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 461  Q
    ||||||| |||| | |||||||||||||| | ||| ||||||||||||||||| ||||||||    
T  14688582 taatgatggtggaatccacttaatggtagaatccaatatctattttatgtgtcgatctctct 14688643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 18653385 - 18653438
Alignment:
Q  416 cacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||||| || || |||||||||| ||||||||||||||| |||||||    
T  18653385 cacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattg 18653438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 468
Target Start/End: Original strand, 31279918 - 31279990
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 468  Q
    |||||||| || || |||||||| ||||| |||||||||  || ||||||||||||||| | |||||||||||    
T  31279918 taattaattatggtaggacccacataatgataggacccacaatttattttatgtgtctagcactctccaaatt 31279990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 43222130 - 43222193
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 459  Q
    ||||||||||| |||||| ||| |||||| || ||||||  ||||||||| |||||||||||||    
T  43222130 taattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctatctct 43222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 396 - 450
Target Start/End: Original strand, 4592804 - 4592858
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtg 450  Q
    ||||||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||    
T  4592804 taattaatgatggtgggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 21213953 - 21213987
Alignment:
Q  477 ccatttattttatcaaatgaagaggatcctaaccc 511  Q
    ||||||||||||||||||| |||||||||||||||    
T  21213953 ccatttattttatcaaatggagaggatcctaaccc 21213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 31546490 - 31546563
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    |||||||| ||  ||||| ||||||||| ||||| ||||  ||||||||||| |||||| |||||| |||||||    
T  31546490 taattaattatgatgggatccacttaatagtagggcccaccatctattttatatgtctacctctcttcaaattg 31546563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 41660110 - 41660183
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||||||||||| || || |  ||||||  |  |||||| |||||||||||||||||||||||    
T  41660110 taattaatgatggtgggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaaattg 41660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 3e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 4888471 - 4888579
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||| |||   |  |||||||||||| |||||||    
T  4888471 taattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatg 4888570  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  4888571 gagaggatc 4888579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 47270580 - 47270668
Alignment:
Q  422 atggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaaccc 511  Q
    |||||||| || ||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||  |||||||||||||||    
T  47270580 atggtagggcctattatctattt-atgtgtctatctatctctaaattgtgtaattccatttattttatcaaatagagaggatcctaaccc 47270668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 25084799 - 25084730
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  25084799 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 25084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 40023327 - 40023215
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||| | |||||||||||||||||||| || |||||| ||||||||| ||||||||| |||||||||||| ||| ||  |||||||| ||||||     
T  40023327 taattaatggtggtgggacccacttaatggtaagatccattaactattttatatgtctatctttctccaaattgtatac-tcgttttattttttcaaata 40023229  T
Q  496 aagaggatcctaac 509  Q
     ||||||| |||||    
T  40023228 gagaggattctaac 40023215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 9559125 - 9559017
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||| ||||||||||||||| |||   |  ||||||||||||  ||||||    
T  9559125 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatg 9559026  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  9559025 gagaggatc 9559017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 39855884 - 39855770
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  ||||||||||||| |||||||||| |  |||| |||||||||||||||||||||||||||    || |||||||| ||| |||||||    
T  39855884 taattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaattacaaac-tccatttaatttgtcaaatg 39855786  T
Q  496 aagaggatcctaaccc 511  Q
    ||||| ||| ||||||    
T  39855785 aagagaatcttaaccc 39855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 12139330 - 12139400
Alignment:
Q  396 taattaatgatagtgggaccc-acttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| ||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  12139330 taattaatgatggtgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaa 12139400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 32915960 - 32916033
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||| ||||| ||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||    
T  32915960 taattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattg 32916033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 512
Target Start/End: Original strand, 33450510 - 33450627
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||||||||||||   |  || |||||||||| |||||    
T  33450510 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaat 33450609  T
Q  495 gaagaggatcctaacccc 512  Q
    | |||||||| |||||||    
T  33450610 ggagaggatcttaacccc 33450627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 47799971 - 47799898
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||||||| |  |||||| |||||||||||||||||||||||    
T  47799971 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattg 47799898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 7712438 - 7712331
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||| ||| |||| ||||||||||||||||||| || ||||||| |||||| |||||||||||| ||||||  | ||||||||||||||   |||||    
T  7712438 taattaaagatggtggcacccacttaatggtaggactcactatctatcttatgtctctatctctctctaaattgcat-cttccatttatttttataaatg 7712340  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  7712339 gagaggatc 7712331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 29844316 - 29844372
Alignment:
Q  417 acttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgta 473  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaaattgtgta 29844372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 396 - 503
Target Start/End: Original strand, 989133 - 989239
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||| || || ||||| ||||| |||||||||||| ||| |||||| |||||||||||||||||||||||   || |||||||| ||| |||||||    
T  989133 taattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgcaaac-tccatttaatttgtcaaatg 989231  T
Q  496 aagaggat 503  Q
     |||||||    
T  989232 gagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 7373872 - 7373985
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatga 496  Q
    ||||||||||||||||| | ||||||| ||| |||||| | |||||||| |||  ||||||||||||||||||  || | |||||||||||| | || ||    
T  7373872 aattaatgatagtgggatctacttaatagtaagacccactgtctattttttgtacctatctctctccaaattgcata-tcccatttattttaaccaacga 7373970  T
Q  497 agaggatcctaaccc 511  Q
    |||||||| ||||||    
T  7373971 agaggatcttaaccc 7373985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 7362572 - 7362676
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||| ||||| ||| ||||| ||||||  ||||||||| ||||||||||||||||||| |||   |  |||||||||||| |||||||    
T  7362572 taattaatgatggtggaacccatttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatg 7362671  T
Q  496 aagag 500  Q
     ||||    
T  7362672 gagag 7362676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 16366522 - 16366630
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||||||| |||||| |||||||| |||  ||||||||  | ||||||||||||||||| |||   |  |||||||||||| |||||||    
T  16366522 taattaatgatggtgggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 16366621  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  16366622 gagaggatc 16366630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 21151156 - 21151264
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| |||||||| ||   ||||||||  ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  21151156 taattaatgatggtgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 21151255  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  21151256 gagaggatc 21151264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 47500354 - 47500236
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||  ||||||||||||| |||| |||||||  ||||||| || ||||||||||||||||||||||    |  || ||||||||||  ||||    
T  47500354 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaat 47500255  T
Q  495 gaagaggatcctaacccct 513  Q
    | |||||||| ||||||||    
T  47500254 ggagaggatcttaacccct 47500236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 8149613 - 8149686
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||||||||||||||||| || |||||| ||  ||||||| || ||||||||||| |||||||    
T  8149613 taattaatgatggtgggacccacttaatgatatgacccactacttattttacgtctctatctctcttcaaattg 8149686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 45260498 - 45260429
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    |||||||||||  ||||| ||||||| |||||||| |||  ||||||||| |||||||||||||||||||    
T  45260498 taattaatgatgatgggatccacttagtggtaggatccacaatctattttttgtgtctatctctctccaa 45260429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 396 - 503
Target Start/End: Original strand, 29631052 - 29631156
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||||||||||| || || |||| ||||||| ||||||| || |||||||||||||   |||||||   ||| |||||||||||| ||||||    
T  29631052 taattaatgatagtgggacctacatagtggttggacccactatctatgttttgtgtctatctctt--caaattgcaaact-ccatttattttaccaaatg 29631148  T
Q  496 aagaggat 503  Q
     |||||||    
T  29631149 gagaggat 29631156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 412 - 504
Target Start/End: Original strand, 44647984 - 44648076
Alignment:
Q  412 gacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 504  Q
    |||||||||| |||| ||| |||  ||||||||| ||||||||||||||||||| |||   |  |||||||||||| ||||||| ||||||||    
T  44647984 gacccacttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 44648076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 24193597 - 24193668
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 467  Q
    |||||| ||||  ||||| ||| ||||||||| ||| |||| |||||||||||||||||||||||| |||||    
T  24193597 taattactgatgatgggatccatttaatggtaagactcattgtctattttatgtgtctatctctcttcaaat 24193668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 18198260 - 18198377
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||||||| |||||| ||| || |||||  ||||||||| ||||||||| | ||||||| |||   |  ||||||||||||  ||||||    
T  18198260 taattaatgatggtgggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatg 18198359  T
Q  496 aagaggatcctaacccct 513  Q
     |||||||| | ||||||    
T  18198360 gagaggatcttcacccct 18198377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 30588539 - 30588612
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||||| | |  |||||| |||||||||||||  ||||||||    
T  30588539 taattaatgatggtgggacccacttagtgataggacccgtcacttattttttgtgtctatctcttcccaaattg 30588612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 436 - 504
Target Start/End: Complemental strand, 5463934 - 5463867
Alignment:
Q  436 tatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 504  Q
    |||||||||||||||| ||| |||||||||||||| ||| |  ||||||| ||||||||| ||||||||    
T  5463934 tatctattttatgtgtttatatctctccaaattgtatac-tatatttattatatcaaatggagaggatc 5463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 19027751 - 19027680
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaattgt 470  Q
    ||||||| |||||| ||||||| || |||||||||  || |||||| | |||||||||||||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaaattgt 19027680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 20726885 - 20726956
Alignment:
Q  400 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaattgt 470  Q
    ||||||| |||||| ||||||| || |||||||||  || |||||| | |||||||||||||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaaattgt 20726956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 38365659 - 38365761
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||||| | | ||| ||||| ||| ||||||||||| ||||| ||| |||||||| || ||||||  ||| || |||||||||||  |||||    
T  38365659 taattaatgatagtagaatccatttaatagtaagacccattatcaattttttgtatctatctcacttcaaattacgta-ttacatttattttaaaaaatg 38365757  T
Q  496 aaga 499  Q
    ||||    
T  38365758 aaga 38365761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 467
Target Start/End: Complemental strand, 46802390 - 46802331
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 467  Q
    |||||||||||||| ||||||||||||   |||||||| | |||||||||||||| ||||    
T  46802390 gtgggacccacttagtggtaggacccaccgtctattttttatgtctatctctctctaaat 46802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 449 - 515
Target Start/End: Original strand, 44390835 - 44390900
Alignment:
Q  449 tgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccctct 515  Q
    |||||||||||||||||||||  | ||||||||||||||   ||||| |||||||| ||||||||||    
T  44390835 tgtctatctctctccaaattgcat-cttccatttatttttataaatggagaggatcttaacccctct 44390900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 425 - 482
Target Start/End: Original strand, 18064588 - 18064643
Alignment:
Q  425 gtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattt 482  Q
    ||||||| || | |||||||||||||||||||||||||| ||||||||| ||||||||    
T  18064588 gtaggactcactgtctattttatgtgtctatctctctcc-aattgtgta-ttccattt 18064643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 47226145 - 47226039
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||| ||| |||| |||||||  |  |||||| ||||| ||||||||||||| |||   |  ||||||||||||  ||||||    
T  47226145 taattaatgatggtgggacccatttagtggtgggacccacca--tattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatg 47226048  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  47226047 gagaggatc 47226039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 19901989 - 19901881
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||| ||||||    
T  19901989 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatg 19901890  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  19901889 gagaggatc 19901881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 399 - 504
Target Start/End: Original strand, 23610649 - 23610754
Alignment:
Q  399 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaag 498  Q
    |||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||||||||||||||||| |||   |  |||||||||||||||||||| ||    
T  23610649 ttaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggag 23610748  T
Q  499 aggatc 504  Q
    ||||||    
T  23610749 aggatc 23610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 5416536 - 5416429
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  |||||||||||| |||||||    
T  5416536 taattaatgatggtgggacccacttagtggtaggacccacaatctatttt-tgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 5416438  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  5416437 gagaggatc 5416429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 408 - 509
Target Start/End: Original strand, 36532641 - 36532741
Alignment:
Q  408 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatccta 507  Q
    |||| ||||||| |||| ||||| ||| ||| ||||||||||||||||||||||| |||||||| || |||||||||||||||| ||| |||||||| ||    
T  36532641 gtggaacccactgaatgataggatccactatttattttatgtgtctatctctctctaaattgtgaac-tccatttattttatcagatggagaggatctta 36532739  T
Q  508 ac 509  Q
    ||    
T  36532740 ac 36532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 56558283 - 56558400
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| || |||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  56558283 taattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 56558382  T
Q  496 aagaggatcctaacccct 513  Q
     |||||||| | ||||||    
T  56558383 gagaggatcttcacccct 56558400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 508
Target Start/End: Original strand, 1871281 - 1871392
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  ||||||||||||| | |||||| ||| ||||||| || | |||||||||||||||||||||  ||| |||||||||||| ||||||     
T  1871281 taattaatgatgatgggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaattgcatac-tccatttattttgtcaaatt 1871379  T
Q  496 aagaggatcctaa 508  Q
     ||||||||||||    
T  1871380 gagaggatcctaa 1871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 56453891 - 56453777
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattt-tatcaaat 494  Q
    |||| |||||| ||||||||||||||||| |||||||||  | ||||||| |||||||||||||||||||||||  | ||||||||||||| ||| ||||    
T  56453891 taatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgcat-cttccatttatttctat-aaat 56453794  T
Q  495 gaagaggatcctaaccc 511  Q
    | |||||||| ||||||    
T  56453793 ggagaggatcttaaccc 56453777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 441 - 512
Target Start/End: Complemental strand, 15178699 - 15178628
Alignment:
Q  441 attttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccc 512  Q
    ||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||| |||| |||||||||||    
T  15178699 attttatgtgtttatctctcttcaaattatgtacttccattcattttatcaaatggagagaatcctaacccc 15178628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 5763233 - 5763159
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 470  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||| ||||||||||||||| ||||    
T  5763233 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgt 5763159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 56269147 - 56269074
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| ||||||||||||  |  |||||| |||||||||||||||||||||||    
T  56269147 taattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattg 56269074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 3952241 - 3952133
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| ||| |||||||||| ||||||||||||  ||||||||| | ||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  3952241 taattaatgatggtgagacccacttagtggtaggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatg 3952142  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  3952141 gagaggatc 3952133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 34778425 - 34778533
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||||||||||||| |||||||| |||  ||||||||| ||||||||||||||| ||| |||   |  ||||||||||||  ||||||    
T  34778425 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatg 34778524  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  34778525 gagaggatc 34778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 5815350 - 5815267
Alignment:
Q  417 acttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggat 503  Q
    ||||| ||||| |||||||||| ||||||  ||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||    
T  5815350 acttagtggtatgacccattatatatttt--gtgtctatctctctcaaaattttgtact-ccatttattttatcaaatggagaggat 5815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 396 - 507
Target Start/End: Complemental strand, 42844258 - 42844148
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| | |||| ||| ||||| ||||||| || | |||||||||||||||||||| |||||||||||| ||  || ||||||||||| | |||    
T  42844258 taattaatgatggagggatccatttaatagtaggacacactctctattttatgtgtctatctatctccaaattgt-taactctatttattttataatatg 42844160  T
Q  496 aagaggatccta 507  Q
     |||||||||||    
T  42844159 gagaggatccta 42844148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 23474115 - 23474188
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||||||  |||| ||| ||||||||||  |||||||||||||||||||||||| ||||||||    
T  23474115 taattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctctccccaaattg 23474188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 24073620 - 24073689
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| | |||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  24073620 taattaatgatggcgggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaa 24073689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 48914589 - 48914516
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||||| || |||||||| ||| |||||||||  |||||||||||||||| ||||||||| ||||||    
T  48914589 taattaatgatagcggaacccactttatgataggacccacaatctattttatgtgtcgatctctctctaaattg 48914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 18207111 - 18207003
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  ||||||||||||| ||||||||||||  ||||||||| | |||||||||||||| || |||   |  | |||||||||| |||||||    
T  18207111 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttgtcaaatg 18207012  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  18207011 gagaggatc 18207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 5524451 - 5524524
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| | |||||||||||||||||||||    
T  5524451 taattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattg 5524524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 506
Target Start/End: Original strand, 13493276 - 13493387
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtcta--tctctctccaaattgtgtacttccatttattttatcaaa 493  Q
    ||||||||||||  ||||| |||||| |||| ||| ||| ||||||||||| |||||||  |||||||| ||||||  ||| |||||||||||| |||||    
T  13493276 taattaatgataaagggactcacttagtggtgggatccactatctattttacgtgtctatctctctctctaaattgcatac-tccatttattttgtcaaa 13493374  T
Q  494 tgaagaggatcct 506  Q
    |  ||||||||||    
T  13493375 tagagaggatcct 13493387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 461
Target Start/End: Original strand, 30567905 - 30567970
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 461  Q
    |||||||||||  ||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||    
T  30567905 taattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctctct 30567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 441 - 506
Target Start/End: Complemental strand, 33841830 - 33841766
Alignment:
Q  441 attttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcct 506  Q
    ||||| |||||||||||||||||||||||| ||| |||||||| |||| |||||| ||||||||||    
T  33841830 attttttgtgtctatctctctccaaattgtatac-tccatttactttaacaaatggagaggatcct 33841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 36688259 - 36688186
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| || |||||| ||  |  |||||| |||||||||||||||||||||||    
T  36688259 taattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattg 36688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 47922425 - 47922324
Alignment:
Q  409 tgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatccta 507  Q
    ||||||||||||| ||||||||||||  ||||||| || ||||||||| |||||||||||||   |  || |||||||||| |||||| |||||||| ||    
T  47922425 tgggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatctta 47922326  T
Q  508 ac 509  Q
    ||    
T  47922325 ac 47922324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 50483627 - 50483554
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    |||||||||||| || ||| ||||||||||| ||| | | ||||||||||| |||||||||| |||||||||||    
T  50483627 taattaatgataatgtgactcacttaatggtgggatcgaatatctattttacgtgtctatctgtctccaaattg 50483554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 33247201 - 33247093
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||| ||||| ||| |||||| |||||  ||||||||  ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  33247201 taattaatgatggtggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 33247102  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  33247101 gagaggatc 33247093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 39862521 - 39862629
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    ||||||||||| |||| || || ||| || |||||| ||  ||||||||| |||||||||||||||| || |||   | ||| |||||||||||||||||    
T  39862521 taattaatgatggtggaactcatttagtgataggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatg 39862620  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  39862621 gagaggatc 39862629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 33262623 - 33262557
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 462  Q
    ||||||||||| |||||||| | ||| |||||||| |||  ||||||||| ||||||||||||||||    
T  33262623 taattaatgatggtgggacctatttagtggtaggatccaccatctattttttgtgtctatctctctc 33262557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 1015925 - 1015852
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| ||||||||||| ||||| | |||||||  |  |||||| |||||||||||||||| ||||||    
T  1015925 taattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaattg 1015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 12312547 - 12312438
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatcta-ttttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaat 494  Q
    |||||||||||  ||||||||||||| |||||||| |||  ||||| |||| | ||||||||||||||||| |||   |  ||||||||||||  |||||    
T  12312547 taattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttgcaaaactccatttattttgccaaat 12312448  T
Q  495 gaagaggatc 504  Q
    | ||||||||    
T  12312447 ggagaggatc 12312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 46804635 - 46804671
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacc 432  Q
    |||||||||||||| ||||||||||||||||||||||    
T  46804635 taattaatgatagttggacccacttaatggtaggacc 46804671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 396 - 434
Target Start/End: Complemental strand, 12241479 - 12241441
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggaccca 434  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  12241479 taattaatgatggtgggacccacttagtggtaggaccca 12241441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 38079791 - 38079725
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 462  Q
    ||||||||||| |||| | ||||||| | ||||||||||  ||||||||  ||||||||||||||||    
T  38079791 taattaatgatggtggaatccacttagtagtaggacccaccatctatttcttgtgtctatctctctc 38079725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 5817976 - 5818013
Alignment:
Q  433 cattatctattttatgtgtctatctctctccaaattgt 470  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  5817976 cattatctcttttttgtgtctatctctctccaaattgt 5818013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 498
Target Start/End: Complemental strand, 36003300 - 36003216
Alignment:
Q  413 acccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaag 498  Q
    ||||||||||||  | |||||| ||| |||||| ||| | |||||||||||||||||  ||||| ||||||||||  |||||||||    
T  36003300 acccacttaatgacatgacccaatatttattttttgtatttatctctctccaaattgcatactt-catttattttgacaaatgaag 36003216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 37002322 - 37002249
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||||||| |  ||||| |||  |  |||||| ||||||||||||| |||||||||    
T  37002322 taattaatgatggtgggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaaattg 37002249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 42010121 - 42010194
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||| |||||||||| ||| || ||||||||   |  |||||| ||| |||||||||||||||||||    
T  42010121 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattg 42010194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 48; Significance: 7e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 58684 - 58774
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||  || |||||||||||||    
T  58684 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcata-ttccatttatttt 58774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 70796 - 70885
Alignment:
Q  397 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 487  Q
    |||||||||| |||| ||||| ||||||||||||   | |||||||||||| ||| ||||||| |||||||||  || |||||||||||||    
T  70796 aattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaattgcata-ttccatttatttt 70885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 7151 - 7220
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||| ||||||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  7151 taattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaa 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 29640 - 29567
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 469  Q
    ||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||| |||||||||||| ||||||    
T  29640 taattaatgatagtgggactcacgtaatgctaggacctattacctattttatgtctctatctctctctaaattg 29567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 208067 - 208175
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 495  Q
    |||||||||||  ||||||||||||| ||||||||||||  ||||||||| ||||| ||||||||||||| |||   |  ||||||||||||  ||||||    
T  208067 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatg 208166  T
Q  496 aagaggatc 504  Q
     ||||||||    
T  208167 gagaggatc 208175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 16468 - 16399
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    |||||||||||  ||||||||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  16468 taattaatgatgatgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaa 16399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 9272 - 9203
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 465  Q
    ||||||||||| |||| | ||||||| |||| |||||||  ||||||||| |||||||||||||||||||    
T  9272 taattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaa 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 17377 - 17311
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 462  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| ||||||||||||||||    
T  17377 taattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 22513 - 22450
Alignment:
Q  396 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 459  Q
    |||||||| || |||| || |||||| |||||||| ||| |||||||||| |||||||||||||    
T  22513 taattaattattgtggaactcacttagtggtaggatccactatctattttttgtgtctatctct 22450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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