View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1351_low_36 (Length: 288)
Name: NF1351_low_36
Description: NF1351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1351_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 67 - 241
Target Start/End: Original strand, 35059943 - 35060117
Alignment:
| Q |
67 |
taatcctcctcaatccatccataaccaccatctccaacctctccataacccccttctccgatggctacgacgacggtttcatcgccatcacaaacaccga |
166 |
Q |
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| T |
35059943 |
taatcctcctcaatccatccataaccaccatctccaacctctccataacccccttctccgatggctacaacgacggtttcatcgccatcacaaacaccga |
35060042 |
T |
|
| Q |
167 |
cgctgatttccaccaatacacctcacagttcaacacccgtggctccgacttcatcaccaatctcatactctctgc |
241 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35060043 |
cgctgatttccatcaatacacctcacagttcaacacccgtggctccgacttcatcaccaatctcatactctctgc |
35060117 |
T |
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