View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1351_low_38 (Length: 285)
Name: NF1351_low_38
Description: NF1351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1351_low_38 |
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Alignment Details
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 7213580 - 7213754
Alignment:
| Q |
51 |
taaaattattgaagtaaagagttataacttgaccnnnnnnnnnnn--ttaaagagatataacaatcgaaagaaggaaattaacattgtttcaattcaaac |
148 |
Q |
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| T |
7213580 |
taaaattattgaagtaaagagttataacttgaccaaaaaaaaaaaaattaaagagatataacaatcgaaagaaggaaattaacattttttcaattcaaac |
7213679 |
T |
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| Q |
149 |
attcctcaatttttgtcttttcgtcctttcattgaacttggtcactataatggaatggttcatacttcatagatg |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7213680 |
attcctcaatttttgtcttttcgtcctttcattgaacttggtcactataatggaatggttcatacttcatagatg |
7213754 |
T |
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