View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1351_low_5 (Length: 644)

Name: NF1351_low_5
Description: NF1351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1351_low_5
NF1351_low_5
[»] chr1 (29 HSPs)
chr1 (1-178)||(32649784-32649961)
chr1 (1-178)||(29534621-29534798)
chr1 (1-110)||(2332913-2333022)
chr1 (4-109)||(22124361-22124466)
chr1 (4-109)||(20958184-20958289)
chr1 (4-109)||(21043221-21043326)
chr1 (4-109)||(28312590-28312695)
chr1 (4-88)||(27653183-27653267)
chr1 (4-88)||(48603528-48603612)
chr1 (8-109)||(20437932-20438034)
chr1 (4-77)||(14800605-14800678)
chr1 (4-77)||(14809479-14809552)
chr1 (4-61)||(16372073-16372131)
chr1 (4-77)||(52940849-52940922)
chr1 (12-88)||(13881342-13881418)
chr1 (4-88)||(41781551-41781633)
chr1 (2-85)||(20031618-20031700)
chr1 (13-88)||(21533834-21533908)
chr1 (4-41)||(1925218-1925255)
chr1 (4-41)||(20924232-20924269)
chr1 (4-41)||(23819387-23819424)
chr1 (4-41)||(1010703-1010740)
chr1 (4-41)||(20228898-20228935)
chr1 (4-41)||(21407335-21407372)
chr1 (8-41)||(16381262-16381295)
chr1 (291-386)||(33781555-33781649)
chr1 (4-41)||(51326868-51326905)
chr1 (4-41)||(52639521-52639558)
chr1 (12-110)||(48520594-48520693)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-178)||(146258-146435)
[»] chr4 (35 HSPs)
chr4 (1-178)||(4831406-4831583)
chr4 (1-178)||(4834701-4834878)
chr4 (1-178)||(30146459-30146636)
chr4 (1-159)||(14047712-14047870)
chr4 (4-109)||(40907147-40907252)
chr4 (4-109)||(18212808-18212913)
chr4 (4-110)||(40906990-40907095)
chr4 (4-109)||(16043088-16043193)
chr4 (4-109)||(24047239-24047344)
chr4 (4-88)||(17048095-17048179)
chr4 (4-88)||(10056714-10056798)
chr4 (4-109)||(26050415-26050519)
chr4 (4-62)||(14746569-14746628)
chr4 (4-79)||(26045264-26045338)
chr4 (4-106)||(13591869-13591971)
chr4 (4-109)||(14852815-14852921)
chr4 (4-77)||(32306967-32307040)
chr4 (4-41)||(10712836-10712873)
chr4 (4-41)||(10926606-10926643)
chr4 (4-41)||(12487691-12487728)
chr4 (4-41)||(14954256-14954293)
chr4 (4-88)||(17333354-17333440)
chr4 (4-41)||(25689850-25689887)
chr4 (4-41)||(27534006-27534043)
chr4 (1-57)||(28385486-28385542)
chr4 (12-109)||(15791857-15791955)
chr4 (4-41)||(4561423-4561460)
chr4 (4-41)||(5757027-5757064)
chr4 (4-41)||(9556510-9556547)
chr4 (4-41)||(14757511-14757548)
chr4 (4-41)||(17810252-17810289)
chr4 (4-41)||(33742358-33742395)
chr4 (7-54)||(14185058-14185106)
chr4 (6-41)||(49547746-49547781)
chr4 (32-109)||(26789441-26789519)
[»] chr3 (65 HSPs)
chr3 (1-178)||(34852527-34852704)
chr3 (1-110)||(8928368-8928477)
chr3 (4-88)||(5223379-5223463)
chr3 (4-109)||(14763666-14763771)
chr3 (4-109)||(23371412-23371517)
chr3 (4-109)||(51300637-51300742)
chr3 (4-88)||(12339781-12339865)
chr3 (4-88)||(12469976-12470060)
chr3 (4-88)||(14179446-14179530)
chr3 (4-88)||(15465150-15465234)
chr3 (4-88)||(43889587-43889671)
chr3 (4-110)||(37427790-37427896)
chr3 (4-77)||(10834075-10834148)
chr3 (4-88)||(324310-324394)
chr3 (4-88)||(10542393-10542477)
chr3 (4-88)||(14670998-14671082)
chr3 (4-88)||(14682497-14682581)
chr3 (4-88)||(16796561-16796645)
chr3 (4-88)||(18700268-18700352)
chr3 (4-88)||(52989683-52989767)
chr3 (6-109)||(9577700-9577803)
chr3 (1-109)||(14647656-14647763)
chr3 (4-62)||(11914002-11914061)
chr3 (4-88)||(14966244-14966328)
chr3 (4-88)||(54876348-54876432)
chr3 (6-61)||(36527821-36527877)
chr3 (4-61)||(3265002-3265060)
chr3 (4-61)||(21837500-21837558)
chr3 (12-88)||(16643255-16643331)
chr3 (1-90)||(16839629-16839717)
chr3 (4-109)||(28194767-28194873)
chr3 (4-41)||(15964952-15964989)
chr3 (4-41)||(15968876-15968913)
chr3 (4-41)||(15972800-15972837)
chr3 (4-41)||(19775748-19775785)
chr3 (16-88)||(44494893-44494965)
chr3 (1-57)||(13436354-13436410)
chr3 (1-57)||(16325294-16325350)
chr3 (11-61)||(38311769-38311820)
chr3 (6-88)||(13919408-13919489)
chr3 (16-109)||(15246106-15246200)
chr3 (16-109)||(15265227-15265321)
chr3 (239-331)||(24979316-24979405)
chr3 (4-41)||(4107486-4107523)
chr3 (4-41)||(4111338-4111375)
chr3 (4-41)||(4588862-4588899)
chr3 (4-41)||(7109681-7109718)
chr3 (4-41)||(7113616-7113653)
chr3 (4-41)||(11070051-11070088)
chr3 (4-41)||(11165618-11165655)
chr3 (4-41)||(11854716-11854753)
chr3 (4-41)||(15617357-15617394)
chr3 (4-41)||(22321647-22321684)
chr3 (4-41)||(22336702-22336739)
chr3 (4-41)||(27409733-27409770)
chr3 (4-41)||(28949707-28949744)
chr3 (4-41)||(30065929-30065966)
chr3 (4-41)||(55022850-55022887)
chr3 (1-57)||(41770-41826)
chr3 (14-57)||(2248716-2248759)
chr3 (4-42)||(14568808-14568846)
chr3 (21-109)||(15207029-15207118)
chr3 (4-41)||(37439725-37439762)
chr3 (11-61)||(20248751-20248803)
chr3 (7-39)||(32402970-32403002)
[»] chr2 (38 HSPs)
chr2 (1-178)||(22703171-22703348)
chr2 (1-108)||(13101577-13101685)
chr2 (4-109)||(9242002-9242107)
chr2 (4-88)||(31345192-31345276)
chr2 (4-109)||(19662360-19662465)
chr2 (4-62)||(24671071-24671130)
chr2 (4-109)||(21073432-21073537)
chr2 (4-77)||(23069255-23069328)
chr2 (113-178)||(13101526-13101591)
chr2 (4-88)||(34874173-34874257)
chr2 (4-62)||(23707274-23707333)
chr2 (4-62)||(24918186-24918245)
chr2 (7-109)||(30643986-30644088)
chr2 (4-77)||(34137016-34137089)
chr2 (4-88)||(27472495-27472579)
chr2 (7-109)||(6261083-6261186)
chr2 (4-88)||(23287440-23287523)
chr2 (4-62)||(24681490-24681549)
chr2 (4-88)||(21081697-21081781)
chr2 (4-88)||(9784757-9784839)
chr2 (4-88)||(26392458-26392541)
chr2 (4-109)||(21237828-21237934)
chr2 (4-41)||(1283369-1283406)
chr2 (4-88)||(18358694-18358778)
chr2 (4-41)||(30345080-30345117)
chr2 (4-41)||(41531093-41531130)
chr2 (4-41)||(10101734-10101771)
chr2 (4-41)||(12901601-12901638)
chr2 (4-41)||(24628568-24628605)
chr2 (14-62)||(24642806-24642855)
chr2 (4-41)||(24649337-24649374)
chr2 (4-41)||(27379522-27379559)
chr2 (4-41)||(27383568-27383605)
chr2 (4-41)||(27601776-27601813)
chr2 (11-61)||(6482838-6482889)
chr2 (11-61)||(6486305-6486356)
chr2 (4-109)||(19201914-19202020)
chr2 (13-104)||(23004835-23004926)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-178)||(48400-48577)
[»] chr7 (69 HSPs)
chr7 (1-159)||(16109403-16109561)
chr7 (1-102)||(837303-837404)
chr7 (1-102)||(1202483-1202584)
chr7 (1-102)||(833307-833408)
chr7 (1-102)||(1198487-1198588)
chr7 (1-110)||(38828301-38828410)
chr7 (4-109)||(11661348-11661453)
chr7 (4-88)||(1858792-1858876)
chr7 (4-109)||(14566244-14566349)
chr7 (4-109)||(16008620-16008725)
chr7 (4-109)||(18872402-18872507)
chr7 (1-90)||(13892667-13892755)
chr7 (4-88)||(14258526-14258610)
chr7 (4-88)||(25927212-25927293)
chr7 (1-109)||(34957413-34957520)
chr7 (4-77)||(10501395-10501468)
chr7 (4-77)||(14157076-14157149)
chr7 (4-109)||(18607529-18607634)
chr7 (4-109)||(42462025-42462130)
chr7 (4-88)||(16460726-16460810)
chr7 (4-109)||(16996298-16996402)
chr7 (4-88)||(16998668-16998752)
chr7 (4-88)||(46580636-46580720)
chr7 (4-62)||(8940325-8940384)
chr7 (4-77)||(38519448-38519521)
chr7 (4-88)||(13918486-13918570)
chr7 (4-88)||(14273590-14273674)
chr7 (4-88)||(16579834-16579918)
chr7 (4-88)||(16585745-16585829)
chr7 (4-88)||(32301363-32301447)
chr7 (8-109)||(14422030-14422132)
chr7 (6-88)||(20487619-20487701)
chr7 (4-62)||(38898180-38898239)
chr7 (6-109)||(9033285-9033389)
chr7 (12-88)||(14929181-14929257)
chr7 (12-88)||(15352647-15352723)
chr7 (4-61)||(18203889-18203946)
chr7 (4-54)||(15720071-15720122)
chr7 (287-376)||(35666549-35666639)
chr7 (4-41)||(18279383-18279420)
chr7 (4-41)||(18283346-18283383)
chr7 (4-85)||(29004066-29004146)
chr7 (4-41)||(45170095-45170132)
chr7 (5-109)||(11768858-11768964)
chr7 (4-77)||(130788-130862)
chr7 (14-88)||(9177626-9177700)
chr7 (11-61)||(10896697-10896748)
chr7 (4-77)||(11525535-11525609)
chr7 (11-61)||(15167285-15167336)
chr7 (4-109)||(20619456-20619562)
chr7 (4-41)||(33087-33124)
chr7 (4-41)||(70854-70891)
chr7 (4-41)||(74963-75000)
chr7 (4-41)||(12704748-12704785)
chr7 (4-41)||(12714844-12714881)
chr7 (4-41)||(12718648-12718685)
chr7 (4-41)||(12723559-12723596)
chr7 (14-62)||(15081899-15081948)
chr7 (14-75)||(16091844-16091904)
chr7 (4-41)||(16114221-16114258)
chr7 (4-41)||(16117374-16117411)
chr7 (4-41)||(16907290-16907327)
chr7 (4-87)||(17060385-17060469)
chr7 (4-41)||(26292375-26292412)
chr7 (4-41)||(39722246-39722283)
chr7 (122-178)||(833263-833318)
chr7 (122-178)||(837259-837314)
chr7 (122-178)||(1198443-1198498)
chr7 (122-178)||(1202439-1202494)
[»] chr6 (49 HSPs)
chr6 (1-108)||(29416845-29416952)
chr6 (4-109)||(15817461-15817566)
chr6 (1-110)||(25738454-25738562)
chr6 (4-109)||(23838250-23838355)
chr6 (4-88)||(23414960-23415044)
chr6 (4-109)||(4476900-4477005)
chr6 (4-88)||(23539045-23539129)
chr6 (4-74)||(20136746-20136816)
chr6 (4-74)||(22196053-22196123)
chr6 (4-77)||(15705415-15705488)
chr6 (4-88)||(19773503-19773587)
chr6 (113-178)||(29416794-29416859)
chr6 (1-109)||(7429915-7430022)
chr6 (4-109)||(18453258-18453363)
chr6 (4-88)||(27556718-27556802)
chr6 (1-109)||(14594178-14594285)
chr6 (4-57)||(20182869-20182923)
chr6 (4-57)||(22153068-22153122)
chr6 (12-109)||(23076816-23076913)
chr6 (4-109)||(28103838-28103943)
chr6 (12-88)||(14979348-14979424)
chr6 (4-88)||(22806008-22806091)
chr6 (4-88)||(33443124-33443205)
chr6 (8-109)||(18177611-18177713)
chr6 (8-109)||(18199355-18199457)
chr6 (8-109)||(18204158-18204260)
chr6 (4-41)||(16760275-16760312)
chr6 (4-41)||(22949088-22949125)
chr6 (4-41)||(22953044-22953081)
chr6 (4-41)||(23871532-23871569)
chr6 (4-41)||(23875488-23875525)
chr6 (12-88)||(25619683-25619759)
chr6 (4-41)||(31477899-31477936)
chr6 (4-40)||(18955853-18955889)
chr6 (1-57)||(23956105-23956161)
chr6 (9-106)||(18896258-18896354)
chr6 (12-109)||(35008234-35008331)
chr6 (4-41)||(8243841-8243878)
chr6 (4-41)||(11566842-11566879)
chr6 (4-41)||(12618933-12618970)
chr6 (4-41)||(14472251-14472288)
chr6 (4-41)||(18917355-18917392)
chr6 (4-41)||(19870570-19870607)
chr6 (4-41)||(22862926-22862963)
chr6 (4-41)||(23395048-23395085)
chr6 (8-60)||(23538890-23538943)
chr6 (4-41)||(23989900-23989937)
chr6 (1-57)||(9622399-9622455)
chr6 (4-41)||(1644688-1644725)
[»] chr5 (31 HSPs)
chr5 (1-108)||(10816475-10816582)
chr5 (1-108)||(23538501-23538608)
chr5 (4-108)||(28370962-28371066)
chr5 (4-109)||(37598822-37598927)
chr5 (4-109)||(42960618-42960723)
chr5 (113-178)||(10816568-10816633)
chr5 (4-88)||(22107395-22107479)
chr5 (4-88)||(30138889-30138973)
chr5 (4-57)||(18356272-18356326)
chr5 (116-178)||(23538597-23538659)
chr5 (1-109)||(43243211-43243318)
chr5 (4-57)||(20910907-20910961)
chr5 (4-61)||(22336643-22336701)
chr5 (4-61)||(22340181-22340239)
chr5 (4-109)||(23469879-23469983)
chr5 (4-88)||(6765904-6765988)
chr5 (4-41)||(10753344-10753381)
chr5 (4-88)||(26732794-26732877)
chr5 (4-88)||(26740607-26740690)
chr5 (1-57)||(33473317-33473373)
chr5 (11-61)||(22750264-22750315)
chr5 (4-61)||(25576842-25576899)
chr5 (4-41)||(15236869-15236906)
chr5 (4-41)||(15236924-15236961)
chr5 (4-41)||(19472809-19472846)
chr5 (4-41)||(20295827-20295864)
chr5 (12-54)||(21328209-21328252)
chr5 (4-77)||(25574441-25574513)
chr5 (4-77)||(25575634-25575706)
chr5 (8-41)||(27988939-27988972)
chr5 (4-41)||(40723676-40723713)
[»] scaffold0117 (1 HSPs)
scaffold0117 (4-88)||(39328-39412)
[»] scaffold0396 (1 HSPs)
scaffold0396 (4-109)||(1970-2075)
[»] scaffold0107 (2 HSPs)
scaffold0107 (4-109)||(36256-36361)
scaffold0107 (4-61)||(10071-10129)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-109)||(110729-110834)
[»] scaffold0200 (1 HSPs)
scaffold0200 (4-88)||(17649-17733)
[»] scaffold0054 (1 HSPs)
scaffold0054 (4-76)||(75801-75873)
[»] scaffold0051 (1 HSPs)
scaffold0051 (4-88)||(31199-31283)
[»] scaffold0040 (2 HSPs)
scaffold0040 (4-61)||(11222-11279)
scaffold0040 (4-61)||(22322-22379)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-88)||(20826-20910)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-88)||(126031-126115)
[»] chr8 (47 HSPs)
chr8 (4-88)||(14397823-14397907)
chr8 (4-88)||(25363163-25363247)
chr8 (1-90)||(21329101-21329189)
chr8 (4-88)||(22237980-22238064)
chr8 (4-106)||(37515781-37515883)
chr8 (4-88)||(19808323-19808407)
chr8 (1-80)||(34950619-34950697)
chr8 (6-87)||(20502063-20502144)
chr8 (4-61)||(23409871-23409929)
chr8 (12-88)||(17461013-17461089)
chr8 (1-78)||(21967539-21967615)
chr8 (1-90)||(21980252-21980340)
chr8 (1-90)||(21985235-21985323)
chr8 (1-90)||(22000271-22000359)
chr8 (12-88)||(23659491-23659567)
chr8 (11-61)||(14103211-14103262)
chr8 (19-90)||(22005249-22005319)
chr8 (4-54)||(22253159-22253210)
chr8 (12-88)||(16799570-16799647)
chr8 (4-77)||(17086125-17086198)
chr8 (4-41)||(18862734-18862771)
chr8 (14-62)||(19936955-19937004)
chr8 (4-41)||(21410930-21410967)
chr8 (4-41)||(21805422-21805459)
chr8 (4-41)||(21828103-21828140)
chr8 (4-60)||(23914113-23914170)
chr8 (1-57)||(11774965-11775021)
chr8 (1-76)||(11251625-11251699)
chr8 (4-109)||(17438156-17438262)
chr8 (12-54)||(22995927-22995970)
chr8 (11-61)||(44476753-44476804)
chr8 (11-61)||(44480015-44480066)
chr8 (4-41)||(19278372-19278409)
chr8 (4-41)||(21972674-21972711)
chr8 (4-41)||(21976759-21976796)
chr8 (12-88)||(23943954-23944030)
chr8 (6-77)||(35026834-35026903)
chr8 (13-109)||(37116434-37116530)
chr8 (4-41)||(43251793-43251830)
chr8 (1-57)||(8414463-8414519)
chr8 (1-57)||(16197949-16198005)
chr8 (1-57)||(25658204-25658260)
chr8 (4-109)||(5083093-5083199)
chr8 (12-109)||(18833645-18833743)
chr8 (25-62)||(16401982-16402020)
chr8 (5-109)||(23667885-23667990)
chr8 (4-36)||(22963426-22963458)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-109)||(9661-9768)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-109)||(28973-29080)
scaffold0080 (1-109)||(34438-34545)
[»] scaffold1783 (1 HSPs)
scaffold1783 (4-109)||(493-598)
[»] scaffold0436 (1 HSPs)
scaffold0436 (4-77)||(8107-8180)
[»] scaffold0019 (2 HSPs)
scaffold0019 (4-109)||(132992-133097)
scaffold0019 (4-41)||(29286-29323)
[»] scaffold2080 (1 HSPs)
scaffold2080 (4-88)||(721-805)
[»] scaffold0575 (1 HSPs)
scaffold0575 (4-88)||(6120-6204)
[»] scaffold0156 (1 HSPs)
scaffold0156 (4-88)||(15818-15902)
[»] scaffold0096 (1 HSPs)
scaffold0096 (4-88)||(21242-21326)
[»] scaffold0020 (2 HSPs)
scaffold0020 (4-88)||(169710-169794)
scaffold0020 (4-109)||(142657-142763)
[»] scaffold1419 (1 HSPs)
scaffold1419 (6-109)||(101-204)
[»] scaffold0001 (4 HSPs)
scaffold0001 (1-109)||(163039-163146)
scaffold0001 (1-90)||(152933-153021)
scaffold0001 (1-57)||(168681-168737)
scaffold0001 (1-57)||(176035-176091)
[»] scaffold0747 (1 HSPs)
scaffold0747 (4-62)||(635-694)
[»] scaffold0599 (1 HSPs)
scaffold0599 (4-62)||(1278-1337)
[»] scaffold0306 (1 HSPs)
scaffold0306 (4-62)||(15073-15132)
[»] scaffold0106 (1 HSPs)
scaffold0106 (4-62)||(15224-15283)
[»] scaffold0484 (1 HSPs)
scaffold0484 (4-61)||(928-986)
[»] scaffold0431 (1 HSPs)
scaffold0431 (4-77)||(15037-15110)
[»] scaffold0293 (2 HSPs)
scaffold0293 (4-61)||(17578-17636)
scaffold0293 (4-61)||(20197-20255)
[»] scaffold0292 (1 HSPs)
scaffold0292 (4-61)||(6687-6745)
[»] scaffold0076 (1 HSPs)
scaffold0076 (4-88)||(24558-24642)
[»] scaffold0034 (1 HSPs)
scaffold0034 (4-88)||(120084-120168)
[»] scaffold0282 (1 HSPs)
scaffold0282 (6-77)||(18139-18210)
[»] scaffold0914 (1 HSPs)
scaffold0914 (12-109)||(1785-1883)
[»] scaffold0741 (1 HSPs)
scaffold0741 (4-62)||(4255-4314)
[»] scaffold0331 (1 HSPs)
scaffold0331 (4-109)||(3943-4049)
[»] scaffold0077 (1 HSPs)
scaffold0077 (4-109)||(55624-55730)
[»] scaffold0022 (2 HSPs)
scaffold0022 (4-62)||(53824-53883)
scaffold0022 (13-109)||(128909-129005)
[»] scaffold0301 (3 HSPs)
scaffold0301 (4-90)||(16528-16613)
scaffold0301 (4-85)||(12133-12213)
scaffold0301 (4-85)||(15285-15365)
[»] scaffold0023 (1 HSPs)
scaffold0023 (4-109)||(105156-105261)
[»] scaffold0012 (2 HSPs)
scaffold0012 (4-109)||(221147-221251)
scaffold0012 (4-41)||(189466-189503)
[»] scaffold0290 (1 HSPs)
scaffold0290 (4-88)||(235-319)
[»] scaffold0205 (1 HSPs)
scaffold0205 (12-76)||(29756-29820)
[»] scaffold0125 (1 HSPs)
scaffold0125 (4-88)||(1835-1919)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-78)||(208998-209074)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-88)||(206485-206568)
[»] scaffold0485 (1 HSPs)
scaffold0485 (4-110)||(10239-10345)
[»] scaffold0356 (1 HSPs)
scaffold0356 (11-61)||(648-699)
[»] scaffold0317 (1 HSPs)
scaffold0317 (4-62)||(6888-6947)
[»] scaffold0170 (1 HSPs)
scaffold0170 (4-109)||(3032-3138)
[»] scaffold0561 (1 HSPs)
scaffold0561 (4-61)||(10549-10607)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-41)||(375-412)
[»] scaffold0229 (1 HSPs)
scaffold0229 (4-41)||(11590-11627)
[»] scaffold0157 (1 HSPs)
scaffold0157 (4-41)||(32749-32786)
[»] scaffold0109 (1 HSPs)
scaffold0109 (4-41)||(36031-36068)
[»] scaffold0037 (1 HSPs)
scaffold0037 (4-41)||(80424-80461)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-41)||(36175-36212)
[»] scaffold0028 (1 HSPs)
scaffold0028 (4-41)||(58808-58845)
[»] scaffold0169 (1 HSPs)
scaffold0169 (7-109)||(29363-29466)
[»] scaffold0032 (1 HSPs)
scaffold0032 (10-77)||(67342-67409)
[»] scaffold1539 (1 HSPs)
scaffold1539 (4-109)||(1014-1120)
[»] scaffold0790 (1 HSPs)
scaffold0790 (9-103)||(6116-6210)
[»] scaffold0111 (2 HSPs)
scaffold0111 (9-109)||(7510-7611)
scaffold0111 (9-109)||(14629-14730)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-55)||(24286-24340)
scaffold0098 (1-55)||(35156-35210)
[»] scaffold0010 (1 HSPs)
scaffold0010 (4-109)||(723-828)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-61)||(85625-85679)
[»] scaffold0676 (1 HSPs)
scaffold0676 (4-41)||(430-467)
[»] scaffold0525 (1 HSPs)
scaffold0525 (4-41)||(3964-4001)
[»] scaffold0434 (1 HSPs)
scaffold0434 (4-52)||(6937-6986)
[»] scaffold0372 (1 HSPs)
scaffold0372 (4-41)||(5190-5227)
[»] scaffold0349 (1 HSPs)
scaffold0349 (4-41)||(12402-12439)
[»] scaffold0141 (1 HSPs)
scaffold0141 (4-41)||(14176-14213)
[»] scaffold0108 (1 HSPs)
scaffold0108 (6-54)||(3335-3384)
[»] scaffold0016 (1 HSPs)
scaffold0016 (4-41)||(207591-207628)
[»] scaffold0006 (2 HSPs)
scaffold0006 (13-109)||(97092-97188)
scaffold0006 (13-109)||(106370-106466)
[»] scaffold0013 (1 HSPs)
scaffold0013 (4-109)||(30407-30513)
[»] scaffold0780 (1 HSPs)
scaffold0780 (14-88)||(3288-3362)
[»] scaffold0507 (1 HSPs)
scaffold0507 (4-109)||(2610-2716)
[»] scaffold0046 (1 HSPs)
scaffold0046 (9-106)||(16861-16957)
[»] scaffold0029 (3 HSPs)
scaffold0029 (4-41)||(61701-61738)
scaffold0029 (4-41)||(65617-65654)
scaffold0029 (4-41)||(80695-80732)


Alignment Details
Target: chr1 (Bit Score: 154; Significance: 2e-81; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 32649784 - 32649961
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  32649784 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 32649883  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  32649884 caacatcaatcgtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaattcatcaattaaatc 32649961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 29534621 - 29534798
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||    
T  29534621 tagacatctcaagatataacgatatcaaatgataatcaacacaacttaaacatcatataaaattccacataatgcatttgaaaatataccacatcattaa 29534720  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  29534721 caacatcaatcgtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaattcatcaattaaatc 29534798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2333022 - 2332913
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||| | |||||||    
T  2333022 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcctatataagtccacataatgcatttgcaaatctaccacgtcattaa 2332923  T
Q  101 caacatcaat 110  Q
    ||||||||||    
T  2332922 caacatcaat 2332913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 22124361 - 22124466
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||| |||| | ||| | |||||    
T  22124361 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaactatatcacattactaaca 22124459  T
Q  103 acatcaa 109  Q
    |||||||    
T  22124460 acatcaa 22124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 20958184 - 20958289
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  20958184 acatctcaagatatgacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaactatatcacattactaaca 20958282  T
Q  103 acatcaa 109  Q
    |||||||    
T  20958283 acatcaa 20958289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 21043326 - 21043221
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  21043326 acatctcaagatataacaatatcaaatgataataaaaatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 21043228  T
Q  103 acatcaa 109  Q
    |||||||    
T  21043227 acatcaa 21043221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 28312590 - 28312695
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |  ||||||||||| || | |||||||| | ||| | ||| |    
T  28312590 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttata-aaatccacataatgtatatacaaatatatctcattactaaaa 28312688  T
Q  103 acatcaa 109  Q
    |||||||    
T  28312689 acatcaa 28312695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 27653267 - 27653183
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || | |||||||||| | ||||||||    
T  27653267 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-ctcataatgcatatacaaatata 27653183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 48603528 - 48603612
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||| || | ||||||||    
T  48603528 acatctcaagatctaacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgtatatacaaatata 48603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 20438034 - 20437932
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caactt-aaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaaca 105  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||  |||||||||||||| | |||||||| | ||| | ||||| ||    
T  20438034 ctcaagatataacaatatcaaatgataatcaacatcaacttaaaacatcttatata-atccacataatgcatatacaaatatatctcattactaacagca 20437936  T
Q  106 tcaa 109  Q
    ||||    
T  20437935 tcaa 20437932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14800605 - 14800678
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  ||||||||||||||    
T  14800605 acatatcaagatataacaatatcaaataataatcaacatcaacttaaacatcttatata-atccacataatgcat 14800678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14809479 - 14809552
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  ||||||||||||||    
T  14809479 acatatcaagatataacaatatcaaataataatcaacatcaacttaaacatcttatata-atccacataatgcat 14809552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16372073 - 16372131
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  16372073 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata 16372131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 52940922 - 52940849
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||||||| |||||| || ||||||||||||    
T  52940922 acatctcaagatataacaataccaaataataatcaacatcaacttaaacatcttatataatt-cacataatgcat 52940849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 13881418 - 13881342
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  13881418 agatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 13881342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 41781633 - 41781551
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||| |||||||||||||| |||||||||||||||||| | |||||||||| |||||| || |||||||||||| | ||||||||    
T  41781633 acatttcaagatataacaacatcaaatgataatcaaca-accttaaacatcttatataatt-cacataatgcatatacaaatata 41781551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 20031700 - 20031618
Alignment:
Q  2 agacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaat 85  Q
    ||||||| ||| |||| |||||| ||||||||| ||||||| |||||||||||||| |||  ||||||||| ||||||||||||    
T  20031700 agacatcccaaaatatgacaataccaaatgatagtcaacactacttaaacatcatacata-atccacataaggcatttgcaaat 20031618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 21533908 - 21533834
Alignment:
Q  13 gatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||||||||||||| ||||||||||  ||||||||||| ||||||  |||||||||||||| | ||||||||    
T  21533908 gatataacaatatcaaataataatcaacaacacttaaacatcttatata-atccacataatgcatatacaaatata 21533834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 1925255 - 1925218
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1925255 acatctcaagatataacaatatcaaatgataatcaaca 1925218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 20924269 - 20924232
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20924269 acatctcaagatataacaatatcaaatgataatcaaca 20924232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23819424 - 23819387
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23819424 acatctcaagatataacaatatcaaatgataatcaaca 23819387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1010703 - 1010740
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  1010703 acatctcaggatataacaatatcaaatgataatcaaca 1010740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 20228935 - 20228898
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20228935 acatctcaggatataacaatatcaaatgataatcaaca 20228898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21407335 - 21407372
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  21407335 acatctcaggatataacaatatcaaatgataatcaaca 21407372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 16381262 - 16381295
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||| |||||||||||||||||||||||||||||    
T  16381262 ctcatgatataacaatatcaaatgataatcaaca 16381295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 33781555 - 33781649
Alignment:
Q  291 gctttgatttcctttgtaattttttgattttcattgacatt-aaaattcgaaaatcattaaatgtatccaaaatatgaaaaattgtaaagaacaaat 386  Q
    ||||||||||||||   ||||  |||||||||||||||||| |||||   ||| ||||| ||||||| |||||||||  ||||| ||||||||||||    
T  33781555 gctttgatttccttctcaattcattgattttcattgacattgaaaataaaaaagtcattcaatgtattcaaaatatg--aaattataaagaacaaat 33781649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 51326868 - 51326905
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  51326868 acatctcaagatataacaacatcaaataataatcaaca 51326905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 52639521 - 52639558
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  52639521 acatctcaggatataacaatatcgaatgataatcaaca 52639558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 48520594 - 48520693
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caactt-aaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    ||||||||||||||||||| |||| ||||| |||||| ||||||| |||||| || |||||||||||| | ||| |||| | ||| ||| | ||||||||    
T  48520594 agatataacaatatcaaataataaacaacatcaacttaaaacatcttatataatt-cacataatgcatatacaactatatcacattatttataacatcaa 48520692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 146258 - 146435
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  146258 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 146357  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  146358 caacatcaatcatcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 146435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 1e-76; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 4831583 - 4831406
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4831583 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 4831484  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  4831483 caacatcaatcatcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 4831406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 4834878 - 4834701
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4834878 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 4834779  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  4834778 caacatcaatcatcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 4834701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 30146459 - 30146636
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  30146459 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacttaatgcatttgcaaatataccacatcattaa 30146558  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  30146559 caatatcaatcgtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaattcatcaattaaatc 30146636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14047712 - 14047870
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||    
T  14047712 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttacgaatataccacatcattaa 14047811  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatat 159  Q
    ||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  14047812 caatatcaatcattattaacaacatcattaatcatcttaatttcatcaataatagatat 14047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 40907147 - 40907252
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||| |||||||  | |||||||||||    
T  40907147 acatctcaagatataaaaatatcaaatgataatcaacatcaacataaacatcatatata-atccacataatgcatttacaaatatttcacatcattaaca 40907245  T
Q  103 acatcaa 109  Q
    |||||||    
T  40907246 acatcaa 40907252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18212808 - 18212913
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | |||||||| | ||| | |||||    
T  18212808 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatatatctcattactaaca 18212906  T
Q  103 acatcaa 109  Q
    |||||||    
T  18212907 acatcaa 18212913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 40906990 - 40907095
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |  || |||| | ||| | ||||||    
T  40906990 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatata-atccacatcatgcatatataactatatcacattactaacaa 40907088  T
Q  104 catcaat 110  Q
    |||||||    
T  40907089 catcaat 40907095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 16043088 - 16043193
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || |||||||||||| | ||| |||| | ||| | |||||    
T  16043088 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatataatt-cacataatgcatatacaactatatcacattactaaca 16043186  T
Q  103 acatcaa 109  Q
    |||||||    
T  16043187 acatcaa 16043193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 24047344 - 24047239
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  24047344 acatcttaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 24047246  T
Q  103 acatcaa 109  Q
    |||||||    
T  24047245 acatcaa 24047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 17048179 - 17048095
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  17048179 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatgtacaaatata 17048095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 10056714 - 10056798
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  10056714 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 10056798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 26050519 - 26050415
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaa 103  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | || |||    
T  26050519 acatctcaagatataacaatatcaaatgaaaatcaacaacacttaaacatcttatata-atccacataatgcatatacaaatatatcacattactatcaa 26050421  T
Q  104 catcaa 109  Q
    ||||||    
T  26050420 catcaa 26050415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 14746628 - 14746569
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  14746628 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 14746569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 26045338 - 26045264
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcattt 79  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||  |||||||||||| |||    
T  26045338 acatctcaagatataacaatatcaaatgaaaatcaacaacacttaaacatcttatata-atccacataatgcnttt 26045264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 13591971 - 13591869
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||  || |||||||||||| | ||| |||| | ||| | |||||    
T  13591971 acatctcaaaatataacaatatcaaatgataatcaacatcaacttaaacatcttatatgatt-cacataatgcatatacaactatatcacattactaaca 13591873  T
Q  103 acat 106  Q
    ||||    
T  13591872 acat 13591869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 14852921 - 14852815
Alignment:
Q  4 acatctcaagatataacaatatcaaatgata-atcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    ||||||||||||||||||||||||||| |||  |||||| ||||||||||||| |||||| || |||||||||||| |||||||||| | ||| | ||||    
T  14852921 acatctcaagatataacaatatcaaataatatttcaacatcaacttaaacatcttatataatt-cacataatgcatatgcaaatatatcacattactaac 14852823  T
Q  102 aacatcaa 109  Q
    ||| ||||    
T  14852822 aacctcaa 14852815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 32307040 - 32306967
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||| || ||||||||||||    
T  32307040 acatctcaagatataacaatattaaataataatcaacatcaacttaaacatcttatataatt-cacataatgcat 32306967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10712836 - 10712873
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10712836 acatctcaagatataacaatatcaaatgataatcaaca 10712873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10926606 - 10926643
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10926606 acatctcaagatataacaatatcaaatgataatcaaca 10926643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12487691 - 12487728
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12487691 acatctcaagatataacaatatcaaatgataatcaaca 12487728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 14954293 - 14954256
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14954293 acatctcaagatataacaatatcaaatgataatcaaca 14954256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 17333354 - 17333440
Alignment:
Q  4 acatctcaagatataacaatatca---aatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||   ||| ||||||||||  |||||| |||||||||||  |||||||||||||| | ||||||||    
T  17333354 acatctcaagatataacaatatcaaataataataatcaacaacacttaatcatcatatata-atccacataatgcatatacaaatata 17333440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 25689850 - 25689887
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25689850 acatctcaagatataacaatatcaaatgataatcaaca 25689887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27534006 - 27534043
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27534006 acatctcaagatataacaatatcaaatgataatcaaca 27534043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28385486 - 28385542
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  28385486 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 28385542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 15791857 - 15791955
Alignment:
Q  12 agatataacaatatcaaatgataa-tcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||| | |||| || |||||||||||| | ||| |||| | ||| ||||||||||||||    
T  15791857 agatataacaatatcaaaggataattcaacatcaacttaaacatcttgtataatt-cacataatgcatatacaactatatcacattattaacaacatcaa 15791955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4561460 - 4561423
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4561460 acatctcaggatataacaatatcaaatgataatcaaca 4561423  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5757064 - 5757027
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  5757064 acatctcaggatataacaatatcaaatgataatcaaca 5757027  T

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Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 9556510 - 9556547
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  9556510 acatctcaggatataacaatatcaaatgataatcaaca 9556547  T

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Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 14757548 - 14757511
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  14757548 acatctcaggatataacaatatcaaatgataatcaaca 14757511  T

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Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17810252 - 17810289
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  17810252 acatctcaggatataacaatatcaaatgataatcaaca 17810289  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 33742358 - 33742395
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33742358 acatctcaggatataacaatatcaaatgataatcaaca 33742395  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 14185058 - 14185106
Alignment:
Q  7 tctcaagatataacaatatcaaatgataatcaaca-caacttaaacatc 54  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||||    
T  14185058 tctcaagatataacatcatcaaatgataatcaacatcaacttaaacatc 14185106  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 49547781 - 49547746
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||| ||||||||||||||||||    
T  49547781 atctcaagatataacaacatcaaatgataatcaaca 49547746  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 26789441 - 26789519
Alignment:
Q  32 ataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||| ||||||||||||| |||||   | |||||||||||| | |||||||| | ||| ||||||||||||||    
T  26789441 ataatcaacatcaacttaaacatcttatattaattcacataatgcatatacaaatatatcacattattaacaacatcaa 26789519  T

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Target: chr3 (Bit Score: 142; Significance: 3e-74; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 34852704 - 34852527
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  34852704 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 34852605  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||    
T  34852604 caacatcaatcatcattaacaacatcattaatcttcttaatttcatcaataatagatatataattcatcaattaaatc 34852527  T

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Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8928477 - 8928368
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  8928477 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 8928378  T
Q  101 caacatcaat 110  Q
    ||||||||||    
T  8928377 caacatcaat 8928368  T

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Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 5223379 - 5223463
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  5223379 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 5223463  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 14763771 - 14763666
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  14763771 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 14763673  T
Q  103 acatcaa 109  Q
    |||||||    
T  14763672 acatcaa 14763666  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 23371517 - 23371412
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  23371517 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 23371419  T
Q  103 acatcaa 109  Q
    |||||||    
T  23371418 acatcaa 23371412  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 51300637 - 51300742
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  51300637 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 51300735  T
Q  103 acatcaa 109  Q
    |||||||    
T  51300736 acatcaa 51300742  T

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Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 12339781 - 12339865
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  12339781 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 12339865  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 12469976 - 12470060
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  12469976 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 12470060  T

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Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14179446 - 14179530
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  14179446 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 14179530  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 15465150 - 15465234
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||| | ||||||||    
T  15465150 acatctcaagatataacaatatcaaatgataatcaacaacaacttaagcatcatatataatt-cacataatgcatatacaaatata 15465234  T

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Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 43889671 - 43889587
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  43889671 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 43889587  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 37427790 - 37427896
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  37427790 acatctcaagatataacagtatcaaatgataatcatcaacaacttaaacatcatatata-atccacataatgcatatacaactatatcacattactaaca 37427888  T
Q  103 acatcaat 110  Q
    ||||||||    
T  37427889 acatcaat 37427896  T

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Target: chr3; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 10834148 - 10834075
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||    
T  10834148 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcat 10834075  T

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Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 324310 - 324394
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  324310 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 324394  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 10542477 - 10542393
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  10542477 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 10542393  T

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Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14670998 - 14671082
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  14670998 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 14671082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14682497 - 14682581
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  14682497 acatctcaagatataacaagatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 14682581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 16796561 - 16796645
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  16796561 acatttcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 16796645  T

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Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 18700352 - 18700268
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  18700352 acatctcaagatataacaatatcaaatgataattaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 18700268  T

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Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 52989767 - 52989683
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  52989767 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 52989683  T

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Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 9577700 - 9577803
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaac 104  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| || |||||||||||| | |||||||  | ||| | |||||||    
T  9577700 atctcaagatataacaatatcaaatgataatcaacaacaccttaaacatcttatataatt-cacataatgcatatacaaatatgtcacattactaacaac 9577798  T
Q  105 atcaa 109  Q
    |||||    
T  9577799 atcaa 9577803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 14647763 - 14647656
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||| ||||  | ||||||    
T  14647763 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggcaaatttaccataacattaa 14647665  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  14647664 caacctcaa 14647656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 11914061 - 11914002
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  11914061 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 11914002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14966244 - 14966328
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||||| || |||||||||||| | ||||||||    
T  14966244 acatctcaagatataacaacatcaaatgataatcaacatcaatttaaacatcttatataatt-cacataatgcatatacaaatata 14966328  T

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Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 54876432 - 54876348
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||| ||||||| | ||||||||    
T  54876432 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacaaaatgcatatacaaatata 54876348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 36527821 - 36527877
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  36527821 atctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatata 36527877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 3265060 - 3265002
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3265060 acatctcatgatataacaacatcaaatgataatcaacatcaacttaaacatcatatata 3265002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 21837500 - 21837558
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  21837500 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatata 21837558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 16643255 - 16643331
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  16643255 agatataacaacatcaaatgataatcaacatcaacttaaacatcctatataatt-cacataatgcatatacaaatata 16643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16839717 - 16839629
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    ||||||||||||   || |||||| ||||||||||||||||  |||||||||||||| |||  |||||||||||||||||||||| ||||    
T  16839717 tagacatctcaaacaatgacaataccaaatgataatcaacattacttaaacatcatacata-atccacataatgcatttgcaaatttacc 16839629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 28194767 - 28194873
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || ||||||||||||  |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  28194767 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaaacattttatataatt-cacataatgcatatacaaatatatcacattactaac 28194865  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  28194866 aacatcaa 28194873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 15964952 - 15964989
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15964952 acatctcaagatataacaatatcaaatgataatcaaca 15964989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 15968876 - 15968913
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15968876 acatctcaagatataacaatatcaaatgataatcaaca 15968913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 15972800 - 15972837
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15972800 acatctcaagatataacaatatcaaatgataatcaaca 15972837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 19775748 - 19775785
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19775748 acatctcaagatataacaatatcaaatgataatcaaca 19775785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 44494893 - 44494965
Alignment:
Q  16 ataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  44494893 ataataatatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 44494965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13436354 - 13436410
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||||||| |||| |||||| ||||||||| ||||||| ||||||||||||||    
T  13436354 tagacatctcaaaatatgacaataccaaatgatagtcaacactacttaaacatcata 13436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16325350 - 16325294
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  16325350 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 16325294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 38311820 - 38311769
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  38311820 aagatataacaatatcaaatggtaatcaacatcaacttaaacatcttatata 38311769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 13919408 - 13919489
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||||||||||| ||||| || ||||||||||  ||||||||||| || ||| || |||||||||||| | ||||||||    
T  13919408 atctcaagatataacattatcacataataatcaacaacacttaaacatcttaaataatt-cacataatgcatatacaaatata 13919489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 15246106 - 15246200
Alignment:
Q  16 ataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||   | |||||||||||| | ||| |||| | ||| | ||||||||||||    
T  15246106 ataacaatatcaaaggataatcaacatcaacttaaacatcttatattaattcacataatgcatatacaattatatcacattaataacaacatcaa 15246200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 15265227 - 15265321
Alignment:
Q  16 ataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||   | |||||||||||| | ||| |||| | ||| | ||||||||||||    
T  15265227 ataacaatatcaaaggataatcaacatcaacttaaacatcttatattaattcacataatgcatatacaattatatcacattaataacaacatcaa 15265321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 24979316 - 24979405
Alignment:
Q  239 ttctcaattcgacagagaagcgaagaccacattgtcacatagggaacaaggagctttgatttcctttgtaattttttgattttcattgacatt 331  Q
    |||||||||||  |||||||| |  | |||||||||||||| ||||  ||||| |||||||||||   ||||||||||| |||||||||||||    
T  24979316 ttctcaattcgtgagagaagcaacaatcacattgtcacataaggaatcaggagttttgatttcct---taattttttgactttcattgacatt 24979405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4107523 - 4107486
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4107523 acatctcaggatataacaatatcaaatgataatcaaca 4107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4111375 - 4111338
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4111375 acatctcaggatataacaatatcaaatgataatcaaca 4111338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4588899 - 4588862
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4588899 acatctcaagatataacaatttcaaatgataatcaaca 4588862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 7109681 - 7109718
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  7109681 acatctcaggatataacaatatcaaatgataatcaaca 7109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 7113616 - 7113653
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  7113616 acatctcaggatataacaatatcaaatgataatcaaca 7113653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11070051 - 11070088
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  11070051 acatctcaggatataacaatatcaaatgataatcaaca 11070088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11165655 - 11165618
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  11165655 acatctcaggatataacaatatcaaatgataatcaaca 11165618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11854716 - 11854753
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  11854716 acatctcaagatataacaatatcaaataataatcaaca 11854753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 15617357 - 15617394
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15617357 acatctcaggatataacaatatcaaatgataatcaaca 15617394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22321647 - 22321684
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  22321647 acatctcaggatataacaatatcaaatgataatcaaca 22321684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22336702 - 22336739
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  22336702 acatctcaggatataacaatatcaaatgataatcaaca 22336739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 27409770 - 27409733
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27409770 acatctcaggatataacaatatcaaatgataatcaaca 27409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 28949707 - 28949744
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28949707 acatctcaggatataacaatatcaaatgataatcaaca 28949744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 30065929 - 30065966
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  30065929 acatctcaggatataacaatatcaaatgataatcaaca 30065966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 55022850 - 55022887
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  55022850 acatctcaggatataacaatatcaaatgataatcaaca 55022887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41770 - 41826
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| |||||||||||||| || ||||||||||||||    
T  41770 tagacatcccaaaatatgacaataccaaatgataatcaatactacttaaacatcata 41826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 2248759 - 2248716
Alignment:
Q  14 atataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  2248759 atatgacaataccaaatgataatcaacactacttaaacatcata 2248716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 14568846 - 14568808
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacac 42  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  14568846 acatctcaagatataagaatatcaaatgataattaacac 14568808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 15207029 - 15207118
Alignment:
Q  21 aatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    ||||||||| ||||||||||| ||||||||||||| |||||   | |||||||||||| | ||| |||| | ||| | ||||||||||||    
T  15207029 aatatcaaaggataatcaacatcaacttaaacatcttatattaattcacataatgcatatacaattatatcacattaataacaacatcaa 15207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 37439762 - 37439725
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  37439762 acatctcaagatataaccatatcaaataataatcaaca 37439725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 20248803 - 20248751
Alignment:
Q  11 aagatataacaatatcaaatgataa-tcaaca-caacttaaacatcatatata 61  Q
    ||||||||||| ||||||||||||| |||||| ||||||||||||| ||||||    
T  20248803 aagatataacagtatcaaatgataattcaacatcaacttaaacatcttatata 20248751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 32403002 - 32402970
Alignment:
Q  7 tctcaagatataacaatatcaaatgataatcaa 39  Q
    |||||||||||||||||||||||| ||||||||    
T  32403002 tctcaagatataacaatatcaaataataatcaa 32402970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 3e-74; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 22703171 - 22703348
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  22703171 tagacatctcaagatataacaatatcaaatgataatcaacacaatttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 22703270  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  22703271 caacatcaatcatcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 22703348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13101685 - 13101577
Alignment:
Q  1 tagacatctcaagatataacaat-atcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcatta 99  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13101685 tagacatctcaagatataaaaattatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcatta 13101586  T
Q  100 acaacatca 108  Q
    |||||||||    
T  13101585 acaacatca 13101577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 9242002 - 9242107
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  9242002 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 9242100  T
Q  103 acatcaa 109  Q
    |||||||    
T  9242101 acatcaa 9242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 31345192 - 31345276
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  31345192 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 31345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 19662465 - 19662360
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  19662465 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 19662367  T
Q  103 acatcaa 109  Q
    |||||||    
T  19662366 acatcaa 19662360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 24671071 - 24671130
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24671071 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcatatatac 24671130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 21073537 - 21073432
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||  ||||||||||| || | |||||||| | ||| | |||||    
T  21073537 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaatatcttatata-atccacataatgaatatacaaatatatctcattactaaca 21073439  T
Q  103 acatcaa 109  Q
    |||||||    
T  21073438 acatcaa 21073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 23069328 - 23069255
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||    
T  23069328 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcat 23069255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 13101591 - 13101526
Alignment:
Q  113 tcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  13101591 tcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 13101526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 34874257 - 34874173
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  34874257 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 34874173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 23707333 - 23707274
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  23707333 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 23707274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 24918186 - 24918245
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  24918186 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 24918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 30644088 - 30643986
Alignment:
Q  7 tctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaaca 105  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | ||||||||    
T  30644088 tctcaagatataacaatatcaaatgataatcaatatctacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaacaaca 30643990  T
Q  106 tcaa 109  Q
    ||||    
T  30643989 tcaa 30643986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 34137016 - 34137089
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  34137016 acatctcaagagataacaatatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcat 34137089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 27472495 - 27472579
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||||| || |||||||||||| | ||||||||    
T  27472495 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatattatataatt-cacataatgcatatacaaatata 27472579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 6261186 - 6261083
Alignment:
Q  7 tctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgc-atttgcaaatataccgcatcattaacaac 104  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||| || | |||||||| | ||| | |||||||    
T  6261186 tctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcaatatacaaatatatctcattactaacaac 6261088  T
Q  105 atcaa 109  Q
    |||||    
T  6261087 atcaa 6261083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 23287440 - 23287523
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||  |||||||| ||||| | ||||||||    
T  23287440 acatctcaagatataacaatatcaaataataatcaacaacacttaatcatcatatata-atccacatattgcatatacaaatata 23287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 24681490 - 24681549
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  24681490 acatctcaagatataacaacatcaaatgatgatcaacatcaacttaaacatcatatatac 24681549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 21081781 - 21081697
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  21081781 acatctaaagatataaaaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 21081697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 9784757 - 9784839
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||| |||||||||||||| | |||||||||| |||||| || |||||||||||| | ||||||||    
T  9784757 acatctcaagatataacaacatccaatgataatcaaca-accttaaacatcttatataatt-cacataatgcatatacaaatata 9784839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 26392458 - 26392541
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||| |||||||||||||||||| ||||||||||  ||||||||||| ||| ||  |||||||||||||| | ||||||||    
T  26392458 acatctcaggatataacaatatcaaataataatcaacaatacttaaacatcttatcta-atccacataatgcatatacaaatata 26392541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 21237828 - 21237934
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataa-tcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    ||||||||||||||||||||||||||| |||| ||| || ||||||||||||| |||||| || |||||||||||| | ||| |||| | ||| | ||||    
T  21237828 acatctcaagatataacaatatcaaataataattcatcatcaacttaaacatcttatataatt-cacataatgcatatacaactatatcacattactaac 21237926  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  21237927 aacatcaa 21237934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1283369 - 1283406
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1283369 acatctcaagatataacaatatcaaatgataatcaaca 1283406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 18358778 - 18358694
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||| |||| |||||| || |||||| ||||| | ||||||||    
T  18358778 acatctcaagatataacaacatcaaataataatcaacatcaacttaagcatcttatataatt-cacatattgcatatacaaatata 18358694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 30345117 - 30345080
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30345117 acatctcaagatataacaatatcaaatgataatcaaca 30345080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 41531130 - 41531093
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41531130 acatctcaagatataacaatatcaaatgataatcaaca 41531093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10101771 - 10101734
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  10101771 acatctcaggatataacaatatcaaatgataatcaaca 10101734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 12901638 - 12901601
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12901638 acatctcaggatataacaatatcaaatgataatcaaca 12901601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 24628605 - 24628568
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24628605 acatctcaggatataacaatatcaaatgataatcaaca 24628568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 24642855 - 24642806
Alignment:
Q  14 atataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  24642855 atataacaacatcaaatcataatcaacatcaacttaaacatcatatatac 24642806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24649337 - 24649374
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24649337 acatctcaggatataacaatatcaaatgataatcaaca 24649374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 27379559 - 27379522
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27379559 acatctcaggatataacaatatcaaatgataatcaaca 27379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 27383605 - 27383568
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27383605 acatctcaggatataacaatatcaaatgataatcaaca 27383568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27601776 - 27601813
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27601776 acatctcaggatataacaatatcaaatgataatcaaca 27601813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 6482838 - 6482889
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||| ||||||    
T  6482838 aagatataacaatatcaaatggtaattaacatcaacttaaacatcttatata 6482889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 6486305 - 6486356
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||| ||||||    
T  6486305 aagatataacaatatcaaatggtaattaacatcaacttaaacatcttatata 6486356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 19202020 - 19201914
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || |||||||| |||| |||||| || || ||||||||| | |||||||| | ||| | ||||    
T  19202020 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaagcatcttatataatt-catataatgcatatacaaatatatcacattactaac 19201922  T
Q  102 aacatcaa 109  Q
    ||| ||||    
T  19201921 aacttcaa 19201914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 23004835 - 23004926
Alignment:
Q  13 gatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaac 104  Q
    ||||||| |||||||||||  ||||||| ||| || ||||||||||||||  |||||||||||||| | |||||||    |||||||||||||    
T  23004835 gatataataatatcaaatgcaaatcaacaacatctcaaacatcatatata-atccacataatgcatatacaaatatttaacatcattaacaac 23004926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 138; Significance: 8e-72; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 48400 - 48577
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  48400 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 48499  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||||| || || ||||||    
T  48500 caatatcaatcatcattaacaacatcattaatcatcttaatttcatcaataatatatatataattcatcaattaaatc 48577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 1e-67; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16109561 - 16109403
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  16109561 tagacatctcaagatatagcaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttacaaatataccacatcattaa 16109462  T
Q  101 caacatcaatagtcattaacaacatcattaatcatcttaatttcatcaataatagatat 159  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  16109461 caacatcaatcatcattaacaatatcattaatcatcttaatttcatcaataatagatat 16109403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 837404 - 837303
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  837404 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataacacatcattaa 837305  T
Q  101 ca 102  Q
    ||    
T  837304 ca 837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1202584 - 1202483
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  1202584 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataattccacataatgcatttgcaaatataacacatcattaa 1202485  T
Q  101 ca 102  Q
    ||    
T  1202484 ca 1202483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 833408 - 833307
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  833408 tagacatctcaagatataacaatatcaattgataatcaacacaacttaaacatcatatataatttcacataatgcatttgcaaatataccacatcattaa 833309  T
Q  101 ca 102  Q
    ||    
T  833308 ca 833307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1198588 - 1198487
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  1198588 tagacatctcaagatataacaatatcaattgataatcaacacaacttaaacatcatatataatttcacataatgcatttgcaaatataccacatcattaa 1198489  T
Q  101 ca 102  Q
    ||    
T  1198488 ca 1198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38828301 - 38828410
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||| | |||||||    
T  38828301 tagacatctcaagatataataatatcaaatgataatcaacacaacttaaacatcctatataagtccacataatgcatttgcaaatctaccacgtcattaa 38828400  T
Q  101 caacatcaat 110  Q
    ||||||||||    
T  38828401 caacatcaat 38828410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 11661348 - 11661453
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  11661348 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 11661446  T
Q  103 acatcaa 109  Q
    |||||||    
T  11661447 acatcaa 11661453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 1858876 - 1858792
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  1858876 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 1858792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 14566244 - 14566349
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  14566244 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 14566342  T
Q  103 acatcaa 109  Q
    |||||||    
T  14566343 acatcaa 14566349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 16008620 - 16008725
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  16008620 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 16008718  T
Q  103 acatcaa 109  Q
    |||||||    
T  16008719 acatcaa 16008725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18872402 - 18872507
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  18872402 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 18872500  T
Q  103 acatcaa 109  Q
    |||||||    
T  18872501 acatcaa 18872507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13892667 - 13892755
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||||||||||||| ||||    
T  13892667 tagacatctcaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcatttgcaaatttacc 13892755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14258526 - 14258610
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  14258526 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 14258610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 25927293 - 25927212
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  25927293 acatctcaagatataacaatatcaaatgataatca--acaacttaaacatcatatataatt-cacataatgcatatacaaatata 25927212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34957413 - 34957520
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||| |||| |||||||||||||||| ||||| | |||||||||||||| |||  |||||||||||||||||||||| ||||  | ||||||    
T  34957413 tagacatctcaaaatatgacaatatcaaatgatagtcaaccctacttaaacatcatacata-atccacataatgcatttgcaaatttaccataacattaa 34957511  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  34957512 caacctcaa 34957520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 10501468 - 10501395
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  10501468 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatataatt-cacataatgcat 10501395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 14157149 - 14157076
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  14157149 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatataatt-cacataatgcat 14157076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18607529 - 18607634
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  18607529 acatctcaatatataaaaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 18607627  T
Q  103 acatcaa 109  Q
    |||||||    
T  18607628 acatcaa 18607634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 42462025 - 42462130
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||| || | ||| |||| | ||| | |||||    
T  42462025 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgaatatacaactatatcacattactaaca 42462123  T
Q  103 acatcaa 109  Q
    |||||||    
T  42462124 acatcaa 42462130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 16460810 - 16460726
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  16460810 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 16460726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 16996298 - 16996402
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaa 103  Q
    ||||||||||||||||||||||||||||| ||||||||  | ||||||||| ||||||  |||||||||||||| | |||||||| | ||| | ||||||    
T  16996298 acatctcaagatataacaatatcaaatgaaaatcaacaacatttaaacatcttatata-atccacataatgcatatacaaatatatcacattactaacaa 16996396  T
Q  104 catcaa 109  Q
    ||||||    
T  16996397 catcaa 16996402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 16998668 - 16998752
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  16998668 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 16998752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 46580720 - 46580636
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  46580720 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 46580636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8940325 - 8940384
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  8940325 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 8940384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 38519448 - 38519521
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |  ||||||||||||||    
T  38519448 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttataca-atccacataatgcat 38519521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 13918570 - 13918486
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| || |||| ||||||| | ||||||||    
T  13918570 acatctcaagatataacgatatcaaatgataattaacaacaacttaaacatcatatataatt-cacaaaatgcatatacaaatata 13918486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14273590 - 14273674
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||| ||| | ||||||||    
T  14273590 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatacatatacaaatata 14273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 16579834 - 16579918
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatc-aacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  16579834 acatctcaagatataacaacatcaaatgataatcaaaaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 16579918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 16585829 - 16585745
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatc-aacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  16585829 acatctcaagatataacaacatcaaatgataatcaaaaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 16585745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 32301363 - 32301447
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||| || |||||||||||| | ||||||||    
T  32301363 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaagatcttatataatt-cacataatgcatatacaaatata 32301447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 14422030 - 14422132
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caactt-aaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaaca 105  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||   |||||||||||||| | |||||||| | ||| | ||||||||    
T  14422030 ctcaagatataacaatatcaaatgataatcaacatcaacttaaaacatcttatat-gatccacataatgcatatacaaatatatctcattactaacaaca 14422128  T
Q  106 tcaa 109  Q
    ||||    
T  14422129 tcaa 14422132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 20487619 - 20487701
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  20487619 atctcaagacataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 20487701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 38898239 - 38898180
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  38898239 acatctctagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 38898180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 9033389 - 9033285
Alignment:
Q  6 atctcaagatataacaatatcaaatgataat-caaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaa 103  Q
    |||||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||| | ||| |||| | ||| ||||||||    
T  9033389 atctcaggatataacaatatcaaataataatgcaacatcaacttaaacatcttatataatt-cacataatgcatatacaactatatcacattattaacaa 9033291  T
Q  104 catcaa 109  Q
    ||||||    
T  9033290 catcaa 9033285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 14929257 - 14929181
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||| | ||||||||    
T  14929257 agatacaacaatatcaaatgataatcaacatcaacttaaacatcttaaatactt-cacataatgcatatccaaatata 14929181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 15352723 - 15352647
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||| | ||||||||    
T  15352723 agatacaacaatatcaaatgataatcaacatcaacttaaacatcttaaatactt-cacataatgcatatccaaatata 15352647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 18203889 - 18203946
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatata 61  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  18203889 acatctcaagatataacaatatcaaataataatcaacaacacttaatcatcatatata 18203946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15720071 - 15720122
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatc 54  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  15720071 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatc 15720122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 376
Target Start/End: Complemental strand, 35666639 - 35666549
Alignment:
Q  287 aggagctttgatttcctttgtaattttttgattttcattgacattaaaattc-gaaaatcattaaatgtatccaaaatatgaaaaattgta 376  Q
    |||||||||||||| ||||  ||||| |||||||||||| | ||| |||||  |||||| ||| |||||||| ||||||||||||||||||    
T  35666639 aggagctttgattttcttttcaatttgttgattttcattaatattgaaattgagaaaattattcaatgtatctaaaatatgaaaaattgta 35666549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 18279383 - 18279420
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18279383 acatctcaagatataacaatatcaaatgataatcaaca 18279420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 18283346 - 18283383
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18283346 acatctcaagatataacaatatcaaatgataatcaaca 18283383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 29004066 - 29004146
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaat 85  Q
    ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||||| |||  |||||||||  |||||||||||    
T  29004066 acatctcaaaatatgacaataccaaatgatagtcaacactacttaaacatcatacata-atccacataagacatttgcaaat 29004146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 45170132 - 45170095
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45170132 acatctcaagatataacaatatcaaatgataatcaaca 45170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 11768964 - 11768858
Alignment:
Q  5 catctcaagatataacaatatcaaatgata--atcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||||||||| |||   |||||| ||||||||||||| |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  11768964 catctcaagatataacaatatcaaataatattttcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatatatcacattactaac 11768866  T
Q  102 aacatcaa 109  Q
    ||| ||||    
T  11768865 aacctcaa 11768858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 130862 - 130788
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||||||| | ||||||  ||||||||||||||    
T  130862 acatctcaagatataacaatatcaaataataatcaatcatcaacttaaacaccttatata-atccacataatgcat 130788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 9177700 - 9177626
Alignment:
Q  14 atataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||| |||||||||||||||||||| |||||||||||||| || ||| || |||||||||||| | ||||||||    
T  9177700 atataataatatcaaatgataatcaacaacaacttaaacatcttaaataatt-cacataatgcatatacaaatata 9177626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 10896748 - 10896697
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  10896748 aagatataacaatatcaaatggtaatcaacatcaacttaaacatcttatata 10896697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 11525609 - 11525535
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcat 77  Q
    |||||||| |||||||||||||||||| |||||||| || ||||||||||||| |||||| || ||||||||||||    
T  11525609 acatctcaggatataacaatatcaaataataatcaatcatcaacttaaacatcttatataatt-cacataatgcat 11525535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 15167285 - 15167336
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  15167285 aagatataacaatatcaaatggtaatcaacatcaacttaaacatcttatata 15167336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 20619456 - 20619562
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || |||||||| |||  |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  20619456 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaagcatattatataatt-cacataatgcatatacaaatatatcacattactaac 20619554  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  20619555 aacatcaa 20619562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 33087 - 33124
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33087 acatctcaggatataacaatatcaaatgataatcaaca 33124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 70891 - 70854
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  70891 acatctcaggatataacaatatcaaatgataatcaaca 70854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 75000 - 74963
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  75000 acatctcaggatataacaatatcaaatgataatcaaca 74963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 12704785 - 12704748
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12704785 acatctcaggatataacaatatcaaatgataatcaaca 12704748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12714844 - 12714881
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12714844 acatctcaggatataacaatatcaaatgataatcaaca 12714881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12718648 - 12718685
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12718648 acatctcaggatataacaatatcaaatgataatcaaca 12718685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12723559 - 12723596
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12723559 acatctcaggatataacaatatcaaatgataatcaaca 12723596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 15081948 - 15081899
Alignment:
Q  14 atataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  15081948 atataacaacatcaaatcataatcaacatcaacttaaacatcatatatac 15081899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 16091844 - 16091904
Alignment:
Q  14 atataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgc 75  Q
    |||||| |||||||||||||||||||||  |||||| |||||||||||  ||||||||||||    
T  16091844 atataataatatcaaatgataatcaacaacacttaatcatcatatata-atccacataatgc 16091904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16114221 - 16114258
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16114221 acatctcaggatataacaatatcaaatgataatcaaca 16114258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16117374 - 16117411
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16117374 acatctcaggatataacaatatcaaatgataatcaaca 16117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16907327 - 16907290
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16907327 acatctcaggatataacaatatcaaatgataatcaaca 16907290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 17060469 - 17060385
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaactt-aaacatcatatatacttccacataatgcatttgcaaatat 87  Q
    ||||||||| |||||||||||||||| ||||||||||  |||||| ||||||| |||||| || |||||||||||| | |||||||    
T  17060469 acatctcaaaatataacaatatcaaacgataatcaacttcaacttaaaacatcttatataatt-cacataatgcatatacaaatat 17060385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 26292375 - 26292412
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  26292375 acatctcaggatataacaatatcaaatgataatcaaca 26292412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 39722246 - 39722283
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39722246 acatctcaggatataacaatatcaaatgataatcaaca 39722283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 833318 - 833263
Alignment:
Q  122 acatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| || || ||||||    
T  833318 acatcattaa-catcttaatttcatcaataatagatatataattcatcaattaaatc 833263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 837314 - 837259
Alignment:
Q  122 acatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| || || ||||||    
T  837314 acatcattaa-catcttaatttcatcaataatagatatataattcatcaattaaatc 837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 1198498 - 1198443
Alignment:
Q  122 acatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| || || ||||||    
T  1198498 acatcattaa-catcttaatttcatcaataatagatatataattcatcaattaaatc 1198443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 1202494 - 1202439
Alignment:
Q  122 acatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| || || ||||||    
T  1202494 acatcattaa-catcttaatttcatcaataatagatatataattcatcaattaaatc 1202439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 9e-47; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29416952 - 29416845
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  29416952 tagacatctcaagatataacaatatcaaatgataattaacacaacttaaacatcatatataattccacataatgcatttgcaaatataccacatcattaa 29416853  T
Q  101 caacatca 108  Q
    ||||||||    
T  29416852 caacatca 29416845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 15817566 - 15817461
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||| | |||||||||| ||| | |||||    
T  15817566 acatctcaagatataacaatatcaaatgataattaacatcaacttaaacatcatatataatt-cacataatgcatattcaaatataccacattactaaca 15817468  T
Q  103 acatcaa 109  Q
    |||||||    
T  15817467 acatcaa 15817461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25738454 - 25738562
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    ||||||||||||||||| |||||||||| | ||||||||| |||||||||||||||  |||  |||||||||||||||||||||||||||  | ||||||    
T  25738454 tagacatctcaagatatgacaatatcaattaataatcaactcaacttaaacatcattcata-atccacataatgcatttgcaaatataccatagcattaa 25738552  T
Q  101 caacatcaat 110  Q
    ||||||||||    
T  25738553 caacatcaat 25738562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 23838250 - 23838355
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  23838250 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 23838348  T
Q  103 acatcaa 109  Q
    |||||||    
T  23838349 acatcaa 23838355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 23414960 - 23415044
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  23414960 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 23415044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 4476900 - 4477005
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  4476900 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 4476998  T
Q  103 acatcaa 109  Q
    |||||||    
T  4476999 acatcaa 4477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 23539045 - 23539129
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||  |||||||||||||||| ||||||||    
T  23539045 acatctcaagatataacaatatcaaatgataattaacatcaacataaacatcatatata-atccacataatgcatttacaaatata 23539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 20136746 - 20136816
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatg 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  20136746 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatata-atccacataatg 20136816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 22196123 - 22196053
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatg 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  22196123 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatata-atccacataatg 22196053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 15705488 - 15705415
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||    
T  15705488 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcat 15705415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 19773587 - 19773503
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-cacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  19773587 acatctcaagatataacaatatcaaatgataatcaagaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 19773503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 29416859 - 29416794
Alignment:
Q  113 tcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  29416859 tcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 29416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7429915 - 7430022
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| ||| || ||||||||||||| |||||| ||||  | ||||||    
T  7429915 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacataatt-cacataatgcattggcaaatttaccataacattaa 7430013  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  7430014 caacctcaa 7430022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18453258 - 18453363
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||| ||||||| | ||| |||| | ||| | |||||    
T  18453258 acatctcaagatataacaaaatcaaatgataatcaacatcaacttaaacatcttatataatt-cacaaaatgcatatacaactatatcacattactaaca 18453356  T
Q  103 acatcaa 109  Q
    |||||||    
T  18453357 acatcaa 18453363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 27556718 - 27556802
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||||||| || |||||||||||| | ||||||||    
T  27556718 acatctcaatatataacaacatcaaatgatgatcaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 27556802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 14594285 - 14594178
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| | |||| ||||  | ||||||    
T  14594285 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggaaaatttaccataacattaa 14594187  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  14594186 caacctcaa 14594178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 20182869 - 20182923
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcata 57  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  20182869 acatctcaagatataacaatatcaaatgataattaacaacaacttaaacatcata 20182923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 22153122 - 22153068
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcata 57  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  22153122 acatctcaagatataacaatatcaaatgataattaacaacaacttaaacatcata 22153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 23076816 - 23076913
Alignment:
Q  12 agatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||| || ||  |||||||| | |||||||| | ||| ||||||||||||||    
T  23076816 agatataataatatcaagtgataatcaacaacaacttaaacatcatatataatt-catgtaatgcatatacaaatatatcacattattaacaacatcaa 23076913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 28103943 - 28103838
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||| | |||||| || |||||||||||| | ||  |||| | ||| |||||||    
T  28103943 acatctcaaggtataacaacatcaaatgataatcaacatcaacttaaacaacttatataatt-cacataatgcatatacatttatatcacattattaaca 28103845  T
Q  103 acatcaa 109  Q
    |||||||    
T  28103844 acatcaa 28103838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 14979424 - 14979348
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  14979424 agatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 14979348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 22806008 - 22806091
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||| || |||||||||||| | ||||||||    
T  22806008 acatcacaagatataacaatatcaaatgataatcaacaacaac-taaacatcttatataatt-cacataatgcatatacaaatata 22806091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 33443124 - 33443205
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||| || ||| || |||||||||||| | ||||||||    
T  33443124 acatctcaagatataacaatatcaaataataatca--acaacttaaacatcttaaataatt-cacataatgcatatacaaatata 33443205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 18177713 - 18177611
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caa-cttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaaca 105  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||| | ||  |||| | ||| ||||||||||    
T  18177713 ctcatgatataacaatatcaaatgataatcaacatcaatcttaaacatcatatataatt-cacttaatgcatatacatttatatcacattattaacaaca 18177615  T
Q  106 tcaa 109  Q
    ||||    
T  18177614 tcaa 18177611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 18199457 - 18199355
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caa-cttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaaca 105  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||| | ||  |||| | ||| ||||||||||    
T  18199457 ctcatgatataacaatatcaaatgataatcaacatcaatcttaaacatcatatataatt-cacttaatgcatatacatttatatcacattattaacaaca 18199359  T
Q  106 tcaa 109  Q
    ||||    
T  18199358 tcaa 18199355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 18204158 - 18204260
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caa-cttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaaca 105  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||| | ||  |||| | ||| ||||||||||    
T  18204158 ctcatgatataacaatatcaaatgataatcaacatcaatcttaaacatcatatataatt-cacttaatgcatatacatttatatcacattattaacaaca 18204256  T
Q  106 tcaa 109  Q
    ||||    
T  18204257 tcaa 18204260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16760275 - 16760312
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16760275 acatctcaagatataacaatatcaaatgataatcaaca 16760312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22949088 - 22949125
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22949088 acatctcaagatataacaatatcaaatgataatcaaca 22949125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22953044 - 22953081
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22953044 acatctcaagatataacaatatcaaatgataatcaaca 22953081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 23871532 - 23871569
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23871532 acatctcaagatataacaatatcaaatgataatcaaca 23871569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 23875488 - 23875525
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23875488 acatctcaagatataacaatatcaaatgataatcaaca 23875525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 25619759 - 25619683
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||| |||||| || |||||||||||| | ||||||||    
T  25619759 agatataacaacatcaaatgataatcaacatcaacttaaaaatcttatataatt-cacataatgcatatacaaatata 25619683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 31477936 - 31477899
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31477936 acatctcaagatataacaatatcaaatgataatcaaca 31477899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 18955889 - 18955853
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  18955889 acatctcaagatataacaatatcaaatgataatcaac 18955853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23956105 - 23956161
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  23956105 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 23956161  T

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Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 18896354 - 18896258
Alignment:
Q  9 tcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacat 106  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||| |||||| || |||||||||||| | ||| |||| | ||| | |||||||||    
T  18896354 tcaagatataacaatatc-aatgacaatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaattatatcccattactaacaacat 18896258  T

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Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 35008234 - 35008331
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||| |||||||| |||||||||| | |||||||||||||||||||| || ||  ||||| || | |||||||| | ||| ||||||||||||||    
T  35008234 agatataataatatcaagtgataatcaaaaacaacttaaacatcatatataatt-catgtaatgaatatacaaatatatcacattattaacaacatcaa 35008331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 8243841 - 8243878
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  8243841 acatctcaggatataacaatatcaaatgataatcaaca 8243878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11566842 - 11566879
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  11566842 acatctcaggatataacaatatcaaatgataatcaaca 11566879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 12618970 - 12618933
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12618970 acatctcaggatataacaatatcaaatgataatcaaca 12618933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 14472251 - 14472288
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  14472251 acatctcaggatataacaatatcaaatgataatcaaca 14472288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 18917392 - 18917355
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  18917392 acatctcaggatataacaatatcaaatgataatcaaca 18917355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 19870570 - 19870607
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19870570 acatctcaggatataacaatatcaaatgataatcaaca 19870607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22862926 - 22862963
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  22862926 acatctcaggatataacaatatcaaatgataatcaaca 22862963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 23395048 - 23395085
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  23395048 acatctcaggatataacaatatcaaatgataatcaaca 23395085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 23538890 - 23538943
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatat 60  Q
    |||| |||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  23538890 ctcatgatataacaatatcaaatgacaatcaacatcaacctaaacatcatatat 23538943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 23989900 - 23989937
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  23989900 acatctcaggatataacaatatcaaatgataatcaaca 23989937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9622455 - 9622399
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||| | ||| ||||||||||| ||||||||| ||||||| ||||||||||||||    
T  9622455 tagacaccccaaaatataacaataccaaatgatattcaacactacttaaacatcata 9622399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1644688 - 1644725
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  1644688 acatctcagaatataacaatatcaaatgataatcaaca 1644725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 9e-47; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10816475 - 10816582
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  10816475 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatataactccacataatgcatttgcaaatataccacatcattaa 10816574  T
Q  101 caacatca 108  Q
    ||||||||    
T  10816575 caacatca 10816582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23538501 - 23538608
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||    
T  23538501 tagacatctcaagatataacaatatcaaatcataatcaacacaacttaaacatcatatataattccacataatgcattttcaaatataccacatcgttaa 23538600  T
Q  101 caacatca 108  Q
    ||||||||    
T  23538601 caacatca 23538608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 28371066 - 28370962
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| |||||||||| | ||| | |||||    
T  28371066 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatgcaaatatatctcattactaaca 28370968  T
Q  103 acatca 108  Q
    ||||||    
T  28370967 acatca 28370962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 37598927 - 37598822
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  37598927 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 37598829  T
Q  103 acatcaa 109  Q
    |||||||    
T  37598828 acatcaa 37598822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 42960618 - 42960723
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  42960618 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 42960716  T
Q  103 acatcaa 109  Q
    |||||||    
T  42960717 acatcaa 42960723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 10816568 - 10816633
Alignment:
Q  113 tcattaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  10816568 tcattaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 10816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 22107479 - 22107395
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  22107479 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 22107395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 30138973 - 30138889
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  30138973 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 30138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 18356272 - 18356326
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcata 57  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18356272 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcata 18356326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 23538597 - 23538659
Alignment:
Q  116 ttaacaacatcattaatcatcttaatttcatcaataatagatatctaatttattaactaaatc 178  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  23538597 ttaacaacatcattaatcatcttaatttcatcaataatagatatataattcatcaattaaatc 23538659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 43243318 - 43243211
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||  ||  ||||||||||||||| |||||| ||||  | ||||||    
T  43243318 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacgta-atccacataatgcattggcaaatttaccataacattaa 43243220  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  43243219 caacctcaa 43243211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 20910961 - 20910907
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcata 57  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  20910961 acatctcaagatataacaatatcaaatgataatcaacaacaacttatacatcata 20910907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 22336643 - 22336701
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  22336643 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata 22336701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 22340181 - 22340239
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  22340181 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata 22340239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 23469879 - 23469983
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  23469879 acatctcaagatatacca-tatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaactatatcacattactaaca 23469976  T
Q  103 acatcaa 109  Q
    |||||||    
T  23469977 acatcaa 23469983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 6765904 - 6765988
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||| |||| |||||| || |||||||||||| | ||||||||    
T  6765904 acatctcaagatataacaacatcaaataataatcaacatcaacttaagcatcttatataatt-cacataatgcatatacaaatata 6765988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10753344 - 10753381
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10753344 acatctcaagatataacaatatcaaatgataatcaaca 10753381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 26732877 - 26732794
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||| |||||||||||||||||| |||||||||   ||||||||||| ||| ||  |||||||||||||| | ||||||||    
T  26732877 acatctcaggatataacaatatcaaataataatcaacgacacttaaacatcttattta-atccacataatgcatatacaaatata 26732794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 26740690 - 26740607
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||| | |||||||||||||||||| ||||||||||  ||||||||||| ||| ||  |||||||||||||| | ||||||||    
T  26740690 acatctaaggatataacaatatcaaataataatcaacaacacttaaacatcttattta-atccacataatgcatatacaaatata 26740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33473373 - 33473317
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  33473373 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 33473317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 22750264 - 22750315
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  22750264 aagatataacaatatcaaatggtaatcaacatcaacttaaacatcttatata 22750315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25576899 - 25576842
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  25576899 acatctcaagatataacaatatc-aataataatcaacatcaacttaaacatcttatata 25576842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 15236906 - 15236869
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15236906 acatctcaggatataacaatatcaaatgataatcaaca 15236869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 15236961 - 15236924
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15236961 acatctcaggatataacaatatcaaatgataatcaaca 15236924  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19472846 - 19472809
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19472846 acatctcaggatataacaatatcaaatgataatcaaca 19472809  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 20295827 - 20295864
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20295827 acatctcaggatataacaatatcaaatgataatcaaca 20295864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 21328252 - 21328209
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatc 54  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  21328252 agatatagcaatatcaaatgataatcaacatcaacttaaacatc 21328209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 25574513 - 25574441
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||| || || ||| |||||||||| ||||||||||||| |||||| || ||||||||||||    
T  25574513 acatctcaagatataactatttc-aataataatcaacatcaacttaaacatcttatataatt-cacataatgcat 25574441  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 25575706 - 25575634
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||| || || ||| |||||||||| ||||||||||||| |||||| || ||||||||||||    
T  25575706 acatctcaagatataactatttc-aataataatcaacatcaacttaaacatcttatataatt-cacataatgcat 25575634  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 27988972 - 27988939
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||| |||||||||||||||||||||||||||||    
T  27988972 ctcatgatataacaatatcaaatgataatcaaca 27988939  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 40723713 - 40723676
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  40723713 acatctcaagatatatcaatattaaatgataatcaaca 40723676  T

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Target: scaffold0117 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 39328 - 39412
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  39328 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 39412  T

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Target: scaffold0396 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 1970 - 2075
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  1970 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaactatatcacattactaaca 2068  T
Q  103 acatcaa 109  Q
    |||||||    
T  2069 acatcaa 2075  T

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Target: scaffold0107 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 36256 - 36361
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  36256 acatctcaagatataacaatatcaaatgataatcaacgacaacttaaacatcttatata-atccacataatgcatatacaactatatcacattactaaca 36354  T
Q  103 acatcaa 109  Q
    |||||||    
T  36355 acatcaa 36361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 10129 - 10071
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||| ||||||    
T  10129 acatctcaagatataacaacatcaaatgataatcaacatcatcttaaacatcttatata 10071  T

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Target: scaffold0026 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 110729 - 110834
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||| | |||||||| | ||| | |||||    
T  110729 acatctcaagatataacaatatcaaatgataatcaatatcaacttaaacatcttatata-atccacataatgcatatacaaatatatctcattactaaca 110827  T
Q  103 acatcaa 109  Q
    |||||||    
T  110828 acatcaa 110834  T

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Target: scaffold0200 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 17649 - 17733
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||| | ||||||||    
T  17649 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatataatt-cacataattcatatacaaatata 17733  T

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Target: scaffold0054 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 75873 - 75801
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgca 76  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  75873 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcatatata-atccacataatgca 75801  T

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Target: scaffold0051 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 31199 - 31283
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || |||||||||||| | ||||||||    
T  31199 acatctcaagatataacaatatcaaatgataataaacaacaacttaaacatcatatataatt-cacataatgcatatacaaatata 31283  T

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Target: scaffold0040 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 11222 - 11279
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatata 61  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11222 acatctcaggatataacaatatcaaatgataatcaacacaacttaaacatcatatata 11279  T

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Target: scaffold0040; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 22322 - 22379
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatata 61  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22322 acatctcaggatataacaatatcaaatgataatcaacacaacttaaacatcatatata 22379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 20826 - 20910
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  20826 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 20910  T

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Target: scaffold0011 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 126031 - 126115
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  126031 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 126115  T

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Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 14397907 - 14397823
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||| | ||||||||    
T  14397907 acatctcaagatataacaatatcaattgataatcaacagcaacttaaacatcatatataatt-cacataatgcatatacaaatata 14397823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 25363247 - 25363163
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  25363247 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 25363163  T

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Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21329101 - 21329189
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||| ||   |||||||||||||||||||||| ||||    
T  21329101 tagacatctcaaaatatgacaataccaaatgataatcaacactacttaaacatcatacat-tatccacataatgcatttgcaaatttacc 21329189  T

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Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 22238064 - 22237980
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  22238064 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 22237980  T

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Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 37515781 - 37515883
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||| |||| | ||| | |||||    
T  37515781 acatatcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaattatatcacattactaaca 37515879  T
Q  103 acat 106  Q
    ||||    
T  37515880 acat 37515883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 19808407 - 19808323
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||| || |||||||||||| | ||||||||    
T  19808407 acatctcaagatataacaacatcaaatgataatcaacatcaacataaacatcttatataatt-cacataatgcatatacaaatata 19808323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34950619 - 34950697
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttg 80  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||  ||  |||||||||||||||||    
T  34950619 tagacatcccaaaatataacaataccaaatgataatcaacactacttaaacatcatactta-atccacataatgcatttg 34950697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 20502144 - 20502063
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatat 87  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||| || |||||||||||| | |||||||    
T  20502144 atctcaagatataacaatatcaaatgataaccaacaacaacataaacatcttatataatt-cacataatgcatatacaaatat 20502063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 23409871 - 23409929
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  23409871 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatata 23409929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 17461089 - 17461013
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  17461089 agatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 17461013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21967615 - 21967539
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatt 78  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||||||    
T  21967615 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcatt 21967539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21980340 - 21980252
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||||| ||| | || |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  21980340 tagacatcccaaaagatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggcaaatttacc 21980252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21985323 - 21985235
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||||| ||| | || |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  21985323 tagacatcccaaaagatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggcaaatttacc 21985235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22000359 - 22000271
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||||| ||| | || |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  22000359 tagacatcccaaaagatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggcaaatttacc 22000271  T

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Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 23659491 - 23659567
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  23659491 agatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 23659567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 14103262 - 14103211
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  14103262 aagatataacaacatcaaatgataatcaacatcaacttaaacatcatatata 14103211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 22005319 - 22005249
Alignment:
Q  19 acaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  22005319 acaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggcaaatttacc 22005249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 22253210 - 22253159
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatc 54  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  22253210 acatctcaagatataacaatatcaaatgataattaacatcaacttaaacatc 22253159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 16799570 - 16799647
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caactt-aaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |||||| || |||||||||||| | ||||||||    
T  16799570 agatataacaatatcaaatgataatcaacatcaacttaaaacatcttatata-tttcacataatgcatatacaaatata 16799647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 17086198 - 17086125
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||| ||| |||||| || ||||||||||||    
T  17086198 acatctcaagatataacaataccaaataataatcaacatcaacttaaatatcttatataatt-cacataatgcat 17086125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 18862771 - 18862734
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18862771 acatctcaagatataacaatatcaaatgataatcaaca 18862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 19937004 - 19936955
Alignment:
Q  14 atataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  19937004 atataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 19936955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21410930 - 21410967
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21410930 acatctcaagatataacaatatcaaatgataatcaaca 21410967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21805422 - 21805459
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21805422 acatctcaagatataacaatatcaaatgataatcaaca 21805459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21828140 - 21828103
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21828140 acatctcaagatataacaatatcaaatgataatcaaca 21828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 23914113 - 23914170
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatat 60  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||| |||||    
T  23914113 acatctcaagatataacaacatcaaatgataatcagcaacaacttaaacatcttatat 23914170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11774965 - 11775021
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  11774965 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 11775021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11251699 - 11251625
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgca 76  Q
    |||||||| ||| |||| |||||| |||||||||||| |||| |||||||||||||| |||  |||||||||||||    
T  11251699 tagacatcccaaaatatgacaataccaaatgataatcgacactacttaaacatcatacata-atccacataatgca 11251625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 17438262 - 17438156
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || |||||||| |||  |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  17438262 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaagcatattatataatt-cacataatgcatatacaaatatatcacattactaac 17438164  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  17438163 aacatcaa 17438156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 22995927 - 22995970
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatc 54  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  22995927 agatataacaatatcaaatgataatcaacatcaacttaaacatc 22995970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 44476753 - 44476804
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  44476753 aagatataacaatatcaaatggtaatcaacatcaacttaaacatcttatata 44476804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 44480015 - 44480066
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  44480015 aagatataacaatatcaaatggtaatcaacatcaacttaaacatcttatata 44480066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19278409 - 19278372
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19278409 acatctcaggatataacaatatcaaatgataatcaaca 19278372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21972711 - 21972674
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  21972711 acatctcaggatataacaatatcaaatgataatcaaca 21972674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21976796 - 21976759
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  21976796 acatctcaggatataacaatatcaaatgataatcaaca 21976759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 23944030 - 23943954
Alignment:
Q  12 agatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||| |||||||| ||||||||||| |||||||||||||| || ||| || |||||||||||| | ||||||||    
T  23944030 agatataataatatcaagtgataatcaacaacaacttaaacatcttaaataatt-cacataatgcatatacaaatata 23943954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 35026903 - 35026834
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaacacaactt-aaacatcatatatacttccacataatgcat 77  Q
    |||||||||||||||||||||||| ||||||||  ||| ||| |||||||||||||| || ||||||||||||    
T  35026903 atctcaagatataacaatatcaaacgataatca--acatcttaaaacatcatatataatt-cacataatgcat 35026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 37116434 - 37116530
Alignment:
Q  13 gatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||||||||  ||||||| ||| || |||||||||||||| || ||  |||||||| | |||||||| | ||| ||||||||||||||    
T  37116434 gatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataatt-catgtaatgcatatacaaatatatcacattattaacaacatcaa 37116530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 43251793 - 43251830
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  43251793 acatctcaggatataacaatatcaaatgataatcaaca 43251830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8414519 - 8414463
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||| ||||||| ||||||||||||||    
T  8414519 tagacatcccaaaatatgacaataccaaatgatagtcaacactacttaaacatcata 8414463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16197949 - 16198005
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||||||| |||| |||||| |||||| || ||||||| ||||||||||||||    
T  16197949 tagacatctcaaaatatgacaataccaaatgctagtcaacactacttaaacatcata 16198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25658260 - 25658204
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||| ||||||| |||| |||||| ||||||||| ||||||| ||||||||||||||    
T  25658260 tagatatctcaaaatatgacaataccaaatgatagtcaacactacttaaacatcata 25658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 5083199 - 5083093
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || ||||||||  ||| |||||  || |||||||||||| | |||||||| | ||| | ||||    
T  5083199 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaaggatcttatatgatt-cacataatgcatatacaaatatatcacattactaac 5083101  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  5083100 aacatcaa 5083093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 18833645 - 18833743
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caactt-aaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    ||||||||||||||||||| |||| ||||| |||||| ||||||| |||||| || |||||||||||| | || ||||| | ||| | ||||||||||||    
T  18833645 agatataacaatatcaaataataaacaacatcaacttaaaacatcttatataatt-cacataatgcatatacacatatatcacattactaacaacatcaa 18833743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 16402020 - 16401982
Alignment:
Q  25 tcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  16402020 tcaaatgataatcaacatcaacttaaacatcatatatac 16401982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 23667885 - 23667990
Alignment:
Q  5 catctcaagatataacaatatcaaatgata-atcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||| |||  | |||| ||||||||||||| |||||| || || ||||||||| | |||||||| | ||| | |||||    
T  23667885 catctcaagatataacaatatcaaataatattttaacatcaacttaaacatcttatataatt-catataatgcatatacaaatatatcacattactaaca 23667983  T
Q  103 acatcaa 109  Q
    || ||||    
T  23667984 acctcaa 23667990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 22963458 - 22963426
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataat 36  Q
    ||||||||||||||||||||||||||| |||||    
T  22963458 acatctcaagatataacaatatcaaataataat 22963426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9768 - 9661
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||  |||| | ||||||| | |||||||| | ||| | |||    
T  9768 tagacatctcaagatataacaatatcaaatgataatcaacatcacttaaacatcttatata-atccatacaatgcatatacaaatatatctcattactaa 9670  T
Q  101 caacatcaa 109  Q
    |||||||||    
T  9669 caacatcaa 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 28973 - 29080
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||| ||||||| |||| |||||| ||||||||| ||||||| |||||||||||||| |||  |||||||||||||||||||||| ||||| | ||||||    
T  28973 tagatatctcaaaatatgacaataccaaatgatagtcaacactacttaaacatcatacata-atccacataatgcatttgcaaatttaccgtaacattaa 29071  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  29072 caacctcaa 29080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34438 - 34545
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||| ||||||| |||| |||||| ||||||||| ||||||| |||||||||||||| |||  |||||||||||||||||||||| ||||| | ||||||    
T  34438 tagatatctcaaaatatgacaataccaaatgatagtcaacactacttaaacatcatacata-atccacataatgcatttgcaaatttaccgtaacattaa 34536  T
Q  101 caacatcaa 109  Q
    |||| ||||    
T  34537 caacctcaa 34545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 493 - 598
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||| |||||| || |||||||||||| | |||||||| | ||| | |||||    
T  493 acatctcaagatataacaatatcaaatgataattaacattaacttaaacatcttatataatt-cacataatgcatatacaaatatatcacattactaaca 591  T
Q  103 acatcaa 109  Q
    |||||||    
T  592 acatcaa 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 8107 - 8180
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  8107 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatataatt-cacataatgcat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 132992 - 133097
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| | |||||||| |  || | |||||    
T  132992 acatttcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaaatatatcttattactaaca 133090  T
Q  103 acatcaa 109  Q
    |||||||    
T  133091 acatcaa 133097  T

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Target: scaffold0019; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 29286 - 29323
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||| |||||||||||||||||||||||||||||||||    
T  29286 acatatcaagatataacaatatcaaatgataatcaaca 29323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 805 - 721
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  805 acatctcaagatataacaatatcaaaagataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 721  T

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Target: scaffold0575 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 6204 - 6120
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || |||||||||||| | ||||||||    
T  6204 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcatatacaaatata 6120  T

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Target: scaffold0156 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 15818 - 15902
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  15818 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 15902  T

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Target: scaffold0096 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 21242 - 21326
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||  ||||||||||| | ||||||||    
T  21242 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatataatt-aacataatgcatatacaaatata 21326  T

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Target: scaffold0020 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 169794 - 169710
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  169794 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 169710  T

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Target: scaffold0020; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 142657 - 142763
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || |||||||| |||| |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  142657 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaagcatcttatataatt-cacataatgcatatacaaatatatcacattactaac 142755  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  142756 aacatcaa 142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 101 - 204
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaac 104  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||| | || |||||||||||| | ||| |||| | ||| |||||||||    
T  101 atctcaagatataacaatatcaaatgataaacatcatcaacttaaacatcatataaaatt-cacataatgcatatacaattatatcacattattaacaac 199  T
Q  105 atcaa 109  Q
    |||||    
T  200 atcaa 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 1e-18; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 163146 - 163039
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaa 100  Q
    |||||||||||| |||| |||||| |||||||||||| |||| |||||||||||||| |||  |||||||||||||||| ||||| ||||  |  |||||    
T  163146 tagacatctcaaaatatgacaataccaaatgataatctacactacttaaacatcatacata-atccacataatgcattttcaaatttaccataatattaa 163048  T
Q  101 caacatcaa 109  Q
    |||||||||    
T  163047 caacatcaa 163039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 153021 - 152933
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    |||||||||||| |||| |||||  ||||||||| ||||||| |||||||||||||| |||  |||||||||||||||||||||| ||||    
T  153021 tagacatctcaaaatatgacaatgccaaatgatactcaacactacttaaacatcatacata-atccacataatgcatttgcaaatttacc 152933  T

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Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 168681 - 168737
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  168681 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 168737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 176035 - 176091
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcata 57  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  176035 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcata 176091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 635 - 694
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  635 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1337 - 1278
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  1337 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15073 - 15132
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  15073 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 15132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15283 - 15224
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  15283 acatctcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 15224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 928 - 986
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatata 61  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  928 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatata 986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 15110 - 15037
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || ||||||||||||    
T  15110 acatctcaagatataacaacatcaaatgataatcaacaacaacttaaacatcttatataatt-cacataatgcat 15037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 17578 - 17636
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  17578 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaacatcttatata 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 20255 - 20197
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatata 61  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||    
T  20255 acatctcaagatttaacaatatcaaatgctaatcaacaacaacttaaacattatatata 20197  T

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Target: scaffold0292 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 6687 - 6745
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatata 61  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  6687 acatctcaagatataacaatatcaaatgataatcaacaacaacttaaacatcttatata 6745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 24642 - 24558
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||| | ||||||||    
T  24642 acatttcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-cacataatgcatatacaaatata 24558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 120084 - 120168
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||| || |||||||||||| | ||||||||    
T  120084 acatctcaagatataacaatatcaaatgataatcaacaataacttaaacatctgatatagtt-cacataatgcatatacaaatata 120168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 18210 - 18139
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||    
T  18210 atctcaagatataacaatatcaaatgataataaacatcaacttaaacatcttatata-atccacataatgcat 18139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 1785 - 1883
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatat-atacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||||||||||||||||||| ||||||||||  | ||| ||| || |||||||||||| | |||||||| | ||||||||||||||||||    
T  1785 agatataacaatatcaaatgataatcaacatcaacttaaactccttataataatt-cacataatgcatatacaaatatatcacatcattaacaacatcaa 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 4314 - 4255
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  4314 acatatcaagatataacaacatcaaatgataatcaacatcaacttaaacatcatatatac 4255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 3943 - 4049
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caactt-aaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||| || |||||||||||||||| |||||| ||||||| ||||||  |||||||||||||| | |||||||| | ||| | ||||    
T  3943 acatctcaagatataacattaccaaatgataatcaacatcaacttaaaacatcttatata-atccacataatgcatatacaaatatatctcattactaac 4041  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  4042 aacatcaa 4049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 55730 - 55624
Alignment:
Q  4 acatctcaagatataacaatatcaaatgata-atcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    ||||||||||||||||||||||||||| |||  |||||| ||||||||||||| |||||| || |||||||||||| |||||||||| | ||| | ||||    
T  55730 acatctcaagatataacaatatcaaataatatttcaacatcaacttaaacatcttatataatt-cacataatgcatatgcaaatatatcacattactaac 55632  T
Q  102 aacatcaa 109  Q
    ||| ||||    
T  55631 aacctcaa 55624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 53883 - 53824
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||    
T  53883 acatctcaagatataacaacatcaaatgataatcaacatctacttaaacatcatatatac 53824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 129005 - 128909
Alignment:
Q  13 gatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||||||||  ||||||| ||| || |||||||||||||| || ||  ||||| || | |||||||| | ||| ||||||||||||||    
T  129005 gatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataatt-catgtaatggatatacaaatatatcacattattaacaacatcaa 128909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 16613 - 16528
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatatacc 90  Q
    ||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  16613 acatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcattggcaaatttacc 16528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 12213 - 12133
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaat 85  Q
    ||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  ||||| ||||||||| ||||||    
T  12213 acatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacgtaatgcattggcaaat 12133  T

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Target: scaffold0301; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 15365 - 15285
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaat 85  Q
    ||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  ||||| ||||||||| ||||||    
T  15365 acatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacgtaatgcattggcaaat 15285  T

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Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 105156 - 105261
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| |||||| || || | ||||||| | |||||||| | ||| | |||||    
T  105156 acatctcaagatataacaatatcaaatgataattaacatcaaattaaacatcttatataatt-caaaaaatgcatatacaaatatatcacattactaaca 105254  T
Q  103 acatcaa 109  Q
    |||||||    
T  105255 acatcaa 105261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 221251 - 221147
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  || ||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  221251 acatctcaagatataacaatatcaaatgataatcaacatcaacttaaa-gtcttatata-atccacataatgcatatacaactatatcacattactaaca 221154  T
Q  103 acatcaa 109  Q
    |||||||    
T  221153 acatcaa 221147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 189503 - 189466
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  189503 acatctcaagatataacaatatcaaatgataatcaaca 189466  T

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Target: scaffold0290 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 235 - 319
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || || ||||||||| | ||||||||    
T  235 acatatcaagatataacaacatcaaatgataatcaacatcaacttaaacatcttatataatt-caaataatgcatatacaaatata 319  T

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Target: scaffold0205 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 29756 - 29820
Alignment:
Q  12 agatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgca 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  29756 agatataacaatatcaaatgataatcaacatcaacttaaacatcttaaatactt-cacataatgca 29820  T

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Target: scaffold0125 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 1919 - 1835
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||  || |||||||||||| | ||||||||    
T  1919 acatctcaagatataacatcatcaaatgataatcaacatcaacttaaacatcttatatgatt-cacataatgcatatacaaatata 1835  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 208998 - 209074
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatt 78  Q
    |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||||||    
T  208998 tagacatcccaaaatatgacaataccaaatgataatcaacactacttaaacatcatacata-atccacataatgcatt 209074  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 206568 - 206485
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaacacaacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||| |||| | ||||  |||||||||||||| | ||||||||    
T  206568 acatctcaagatataacaatatcaaataataatcaacaacacttaatcatcttgtata-atccacataatgcatatacaaatata 206485  T

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Target: scaffold0485 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 10239 - 10345
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||| |||||||||||||| ||||||| || ||||||||||||| ||||||  |||||||||||||| | ||| || | | ||| | |||||    
T  10239 acatctcaagatgtaacaatatcaaataataatcatcatcaacttaaacatcttatata-atccacataatgcatatacaactacatcacattactaaca 10337  T
Q  103 acatcaat 110  Q
    ||||||||    
T  10338 acatcaat 10345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 699 - 648
Alignment:
Q  11 aagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  699 aagatataacaacatcaaatgataatcaacatcaacttaaacatcatatata 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 6947 - 6888
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatac 62  Q
    ||||||||||||||||||| || |||||||| |||||| |||||||||||||||||||||    
T  6947 acatctcaagatataacaacattaaatgatactcaacatcaacttaaacatcatatatac 6888  T

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Target: scaffold0170 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 3032 - 3138
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||||||| |||||| |||||||| || |||||||| |||| |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  3032 acatctcaagatataacaatgtcaaataataatcaatcatcaacttaagcatcttatataatt-cacataatgcatatacaaatatatcacattactaac 3130  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  3131 aacatcaa 3138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 10549 - 10607
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  10549 acatctctagatgtaacaacatcaaatgataatcaacatcaacttaaacatcatatata 10607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 375 - 412
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  375 acatctcaagatataacaatatcaaatgataatcaaca 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11627 - 11590
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11627 acatctcaagatataacaatatcaaatgataatcaaca 11590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 32786 - 32749
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32786 acatctcaagatataacaatatcaaatgataatcaaca 32749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36068 - 36031
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36068 acatctcaagatataacaatatcaaatgataatcaaca 36031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 80461 - 80424
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  80461 acatctcaagatataacaatatcaaatgataatcaaca 80424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36212 - 36175
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36212 acatctcaagatataacaatatcaaatgataatcaaca 36175  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 58845 - 58808
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  58845 acatctcaagatataacaatatcaaatgataatcaaca 58808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 29466 - 29363
Alignment:
Q  7 tctcaagatataacaatatcaaatgata-atcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaac 104  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||||||| |||||| || |||||||| ||| |||||||||| | ||| | |||||||    
T  29466 tctcaagatataacaatatcaaataatatttcaacatcaacttaaacatcttatataatt-cacataatacatatgcaaatatatcacattactaacaac 29368  T
Q  105 atcaa 109  Q
     ||||    
T  29367 ctcaa 29363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 67342 - 67409
Alignment:
Q  10 caagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcat 77  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| |||| | || ||||||||||||    
T  67342 caagatataacaacatcaaatgataatcaacatcaacttaaacatcttatacaatt-cacataatgcat 67409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 1014 - 1120
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    |||||||||||||||| ||| |||||| |||||||| || |||||||| |||| |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  1014 acatctcaagatataagaatgtcaaataataatcaatcatcaacttaagcatcttatataatt-cacataatgcatatacaaatatatcacattactaac 1112  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  1113 aacatcaa 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 6116 - 6210
Alignment:
Q  9 tcaagatataacaatatcaaatgataatca-acacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaa 103  Q
    ||||||||||||||||||||||||||| ||  | |||||||||||||||||| | || |||||||||||| | ||| |||| | ||| ||||||||    
T  6116 tcaagatataacaatatcaaatgataaacatcctcaacttaaacatcatataaaatt-cacataatgcatatacaattatatcacattattaacaa 6210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 7510 - 7611
Alignment:
Q  9 tcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacat 106  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||| |||||| || |||||||||||| | |||||||| | ||| | |||||||||    
T  7510 tcaagatataacaatgtcaaataataatcaatcatcaacttaagcatcttatataatt-cacataatgcatatacaaatatatcacattactaacaacat 7608  T
Q  107 caa 109  Q
    |||    
T  7609 caa 7611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 14629 - 14730
Alignment:
Q  9 tcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacat 106  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||| |||||| || |||||||||||| | |||||||| | ||| | |||||||||    
T  14629 tcaagatataacaatgtcaaataataatcaatcatcaacttaagcatcttatataatt-cacataatgcatatacaaatatatcacattactaacaacat 14727  T
Q  107 caa 109  Q
    |||    
T  14728 caa 14730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24286 - 24340
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatca 55  Q
    |||||||||||| |||| |||||| ||||||| ||||||||| ||||||||||||    
T  24286 tagacatctcaaaatatgacaataccaaatgacaatcaacactacttaaacatca 24340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35156 - 35210
Alignment:
Q  1 tagacatctcaagatataacaatatcaaatgataatcaacacaacttaaacatca 55  Q
    |||||||||||| |||| |||||| ||||||| ||||||||| ||||||||||||    
T  35156 tagacatctcaaaatatgacaataccaaatgacaatcaacactacttaaacatca 35210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 723 - 828
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaaca 102  Q
    |||||||||||||| |||  || |||| |||||||||| ||||||||||||| ||||||  |||||||||||||| | ||| |||| | ||| | |||||    
T  723 acatctcaagatatcacatcatgaaataataatcaacatcaacttaaacatcttatata-atccacataatgcatatacaactatatcacattactaaca 821  T
Q  103 acatcaa 109  Q
    |||||||    
T  822 acatcaa 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 85625 - 85679
Alignment:
Q  8 ctcaagatataacaatatcaaatgataatcaaca-caacttaaacatcatatata 61  Q
    ||||||||||||||| ||||||| |||||||||| |||||||| |||||||||||    
T  85625 ctcaagatataacaacatcaaataataatcaacatcaacttaagcatcatatata 85679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 430 - 467
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  430 acatctcaggatataacaatatcaaatgataatcaaca 467  T

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Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4001 - 3964
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4001 acatctcaggatataacaatatcaaatgataatcaaca 3964  T

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Target: scaffold0434 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 6986 - 6937
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca-caacttaaaca 52  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  6986 acatctcaagatataacaacattaaatgataatcaacatcaacttaaaca 6937  T

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Target: scaffold0372 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5227 - 5190
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  5227 acatctcaggatataacaatatcaaatgataatcaaca 5190  T

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Target: scaffold0349 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12402 - 12439
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12402 acatctcaggatataacaatatcaaatgataatcaaca 12439  T

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Target: scaffold0141 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 14213 - 14176
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||| |||||||||||||||||||||||||||||||||    
T  14213 acatatcaagatataacaatatcaaatgataatcaaca 14176  T

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Target: scaffold0108 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3335 - 3384
Alignment:
Q  6 atctcaagatataacaatatcaaatgataatcaaca-caacttaaacatc 54  Q
    ||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  3335 atctcaagatataacaatatcaaatgacaatcaacatcaactgaaacatc 3384  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 207628 - 207591
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||| |||||||||||||||||||||||||||||||||    
T  207628 acatatcaagatataacaatatcaaatgataatcaaca 207591  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 97092 - 97188
Alignment:
Q  13 gatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||||||||  ||||||| ||| || |||||||||||||| || ||  |||||||| | |||||||| | ||| ||||||||||||||    
T  97092 gatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataatt-catgtaatgcatatacaaatatatcacattattaacaacatcaa 97188  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 106370 - 106466
Alignment:
Q  13 gatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacatcaa 109  Q
    |||||||||||||||||||  ||||||| ||| || |||||||||||||| || ||  |||||||| | |||||||| | ||| ||||||||||||||    
T  106370 gatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataatt-catgtaatgcatatacaaatatatcacattattaacaacatcaa 106466  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 30407 - 30513
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa--cacaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    ||||||||||| |||||||| |||||| ||||||||   ||||||||| |||  |||||| || |||||||||||| | |||||||| | ||| | ||||    
T  30407 acatctcaagacataacaatgtcaaataataatcaatcaacaacttaagcattttatataatt-cacataatgcatatacaaatatatcacattactaac 30505  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  30506 aacatcaa 30513  T

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Target: scaffold0780 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 3362 - 3288
Alignment:
Q  14 atataacaatatcaaatgataatcaaca-caacttaaacatcatatatacttccacataatgcatttgcaaatata 88  Q
    ||||||||| || |||||||||||||||  |||||||||||| |||||| || |||||||||||| | ||||||||    
T  3362 atataacaacattaaatgataatcaacattaacttaaacatcttatataatt-cacataatgcatatacaaatata 3288  T

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Target: scaffold0507 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 2716 - 2610
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaa-ca-caacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaac 101  Q
    ||||||||||||||| | || |||||| |||||||| || |||||||| |||| |||||| ||| ||||||||||| | |||||||| | ||| | ||||    
T  2716 acatctcaagatatatccatgtcaaataataatcaatcatcaacttaagcatcttatataattc-acataatgcatatacaaatatatcacattactaac 2618  T
Q  102 aacatcaa 109  Q
    ||||||||    
T  2617 aacatcaa 2610  T

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Target: scaffold0046 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 16957 - 16861
Alignment:
Q  9 tcaagatataacaatatcaaatgataatcaac-acaacttaaacatcatatatacttccacataatgcatttgcaaatataccgcatcattaacaacat 106  Q
    |||||||||||||||||| ||||| ||||||| ||||||| |||||| |||||| || |||||||||||| | ||| |||| | ||| | |||||||||    
T  16957 tcaagatataacaatatc-aatgacaatcaacaacaacttgaacatcttatataatt-cacataatgcatatacaattatatcacattactaacaacat 16861  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 61738 - 61701
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  61738 acatctcaggatataacaatatctaatgataatcaaca 61701  T

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Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 65654 - 65617
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  65654 acatctcaggatataacaatatcaaacgataatcaaca 65617  T

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Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 80695 - 80732
Alignment:
Q  4 acatctcaagatataacaatatcaaatgataatcaaca 41  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  80695 acatctcaggatataacaatattaaatgataatcaaca 80732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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