View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13521_high_1 (Length: 446)

Name: NF13521_high_1
Description: NF13521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13521_high_1
NF13521_high_1
[»] chr3 (12 HSPs)
chr3 (178-402)||(17514312-17514536)
chr3 (179-368)||(32304856-32305045)
chr3 (185-368)||(42540792-42540975)
chr3 (182-368)||(34817613-34817800)
chr3 (51-133)||(32304728-32304810)
chr3 (51-131)||(17509931-17510011)
chr3 (54-133)||(42540661-42540740)
chr3 (268-367)||(52254550-52254649)
chr3 (268-362)||(33389463-33389556)
chr3 (361-402)||(32305055-32305096)
chr3 (361-402)||(42540985-42541026)
chr3 (361-402)||(34817562-34817603)
[»] chr8 (5 HSPs)
chr8 (178-368)||(13462389-13462579)
chr8 (50-133)||(13462624-13462707)
chr8 (312-398)||(9319070-9319156)
chr8 (180-244)||(9318980-9319044)
chr8 (361-402)||(13462338-13462379)
[»] chr7 (9 HSPs)
chr7 (178-368)||(17278683-17278873)
chr7 (178-308)||(30765989-30766118)
chr7 (182-367)||(8685003-8685185)
chr7 (50-133)||(17278918-17279001)
chr7 (55-133)||(30766163-30766241)
chr7 (271-367)||(17236335-17236431)
chr7 (324-368)||(30765951-30765995)
chr7 (361-402)||(17278632-17278673)
chr7 (361-399)||(30765903-30765941)
[»] chr4 (9 HSPs)
chr4 (178-402)||(40680699-40680926)
chr4 (178-368)||(9086920-9087111)
chr4 (51-133)||(9086793-9086875)
chr4 (51-133)||(40680972-40681054)
chr4 (268-368)||(13631104-13631204)
chr4 (268-367)||(50281951-50282050)
chr4 (361-402)||(9087121-9087162)
chr4 (301-367)||(44182834-44182899)
chr4 (361-395)||(45044613-45044647)
[»] chr6 (14 HSPs)
chr6 (178-368)||(12261074-12261265)
chr6 (178-368)||(16146362-16146550)
chr6 (178-368)||(20746206-20746398)
chr6 (178-368)||(27129126-27129315)
chr6 (51-133)||(12260947-12261029)
chr6 (55-133)||(27129360-27129438)
chr6 (268-367)||(901693-901792)
chr6 (51-133)||(20746079-20746161)
chr6 (51-133)||(16146595-16146677)
chr6 (361-402)||(12261275-12261316)
chr6 (361-399)||(27129078-27129116)
chr6 (369-402)||(16146311-16146344)
chr6 (361-393)||(20746408-20746440)
chr6 (361-390)||(20746452-20746481)
[»] chr1 (11 HSPs)
chr1 (178-368)||(36142397-36142587)
chr1 (178-368)||(47112376-47112566)
chr1 (178-402)||(49652631-49652853)
chr1 (268-364)||(24508484-24508580)
chr1 (51-133)||(49653184-49653266)
chr1 (55-133)||(36142632-36142710)
chr1 (51-133)||(47112611-47112693)
chr1 (268-367)||(52750437-52750537)
chr1 (51-129)||(35122699-35122777)
chr1 (361-402)||(36142346-36142387)
chr1 (361-402)||(47112325-47112366)
[»] chr5 (7 HSPs)
chr5 (178-368)||(6794368-6794556)
chr5 (178-368)||(23082823-23083012)
chr5 (55-133)||(6794245-6794323)
chr5 (51-132)||(23083058-23083139)
chr5 (210-341)||(22165801-22165930)
chr5 (361-399)||(6794566-6794604)
chr5 (361-402)||(23082772-23082813)
[»] chr2 (16 HSPs)
chr2 (178-368)||(28189730-28189920)
chr2 (178-368)||(19298154-19298344)
chr2 (178-368)||(40468675-40468869)
chr2 (178-368)||(8029593-8029783)
chr2 (178-368)||(20685914-20686102)
chr2 (50-133)||(8029465-8029548)
chr2 (55-133)||(28189965-28190043)
chr2 (268-367)||(3093423-3093522)
chr2 (51-133)||(19298027-19298109)
chr2 (51-133)||(20686147-20686229)
chr2 (51-133)||(40468545-40468630)
chr2 (361-438)||(20685827-20685904)
chr2 (361-402)||(40468879-40468920)
chr2 (361-402)||(8029793-8029834)
chr2 (369-402)||(19298362-19298395)
chr2 (209-247)||(35738881-35738919)
[»] scaffold0202 (2 HSPs)
scaffold0202 (178-368)||(21791-21982)
scaffold0202 (361-398)||(21992-22029)


Alignment Details
Target: chr3 (Bit Score: 180; Significance: 5e-97; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 178 - 402
Target Start/End: Original strand, 17514312 - 17514536
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  17514312 caactgttagttgtagttgttgttgatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaa 17514411  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgattatgtttatat 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||     
T  17514412 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatggaaaaattggttattgattaagtttatag 17514511  T
Q  378 atttgttgaagatgatgaaaaggaa 402  Q
    |||| ||||||||||||||||||||    
T  17514512 atttattgaagatgatgaaaaggaa 17514536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 179 - 368
Target Start/End: Original strand, 32304856 - 32305045
Alignment:
Q  179 aactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaag 278  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  32304856 aactgttagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaag 32304955  T
Q  279 attttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32304956 attttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 32305045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 185 - 368
Target Start/End: Original strand, 42540792 - 42540975
Alignment:
Q  185 tagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaagattttg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||    
T  42540792 tagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatttggaaaaaaataaattaggaaatagatatgaagattttg 42540891  T
Q  285 gttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42540892 gttgatttgctttagggagattgagaaattgtattgtttagattgaaagaaatgtttatgaatgaaaaaattggttattgatta 42540975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 182 - 368
Target Start/End: Complemental strand, 34817800 - 34817613
Alignment:
Q  182 tgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnn-taaattaggaaatagatatgaagat 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||||||||| |||| |    
T  34817800 tgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaataaataaaataggaaatagatacgaaggt 34817701  T
Q  281 tttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  34817700 tttggttgatttgctttagggagattgagaaattgtgttgtttagattggaagagatgttcatgaatgaaaaaattggttattgatta 34817613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 32304728 - 32304810
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32304728 ttggaaattggtgtcgttcttcaaccttggattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtcac 32304810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 17509931 - 17510011
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtc 131  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  17509931 ttggaaattggtgtcgttcttcaaccttggattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtc 17510011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 42540661 - 42540740
Alignment:
Q  54 gaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  42540661 gaaattggtgtcgttcttcaaccttggattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtcac 42540740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 52254649 - 52254550
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||| | |||| || |||||||||||||||    
T  52254649 tagatatgaagattttggttgatttggtctagggagattgagaaattgtattgtttagattgaaagggatgttttttaatggaacaattggttattgatt 52254550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 33389556 - 33389463
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttat 362  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||| | |||| ||||||| |||||    
T  33389556 tagatataaagattttggttgatttggtttagggagattgaaaaattgtgttgttttgattgaaagggatgttt-ttaatggaaaaattagttat 33389463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 32305055 - 32305096
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32305055 attgattatgtttatatatttgttgaagatgatgaaaaggaa 32305096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 42540985 - 42541026
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42540985 attgattatgtttatatatttgttgaagatgatgaaaaggaa 42541026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 34817603 - 34817562
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  34817603 attgattatgtttatagatttgttgaagatgatgaaaaggaa 34817562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 1e-88; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 13462579 - 13462389
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  13462579 caactgctagttgtagtagttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaa 13462480  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13462479 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 13462389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 13462707 - 13462624
Alignment:
Q  50 tttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13462707 tttggaaattggtgatgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 13462624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 312 - 398
Target Start/End: Original strand, 9319070 - 9319156
Alignment:
Q  312 attgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgattatgtttatatatttgttgaagatgatgaaaa 398  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9319070 attgtgttgtttagattgaaagggatgtttttgaatgaaaaaattggttattgattatgtttatagatttgatgaagatgatgaaaa 9319156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 9318980 - 9319044
Alignment:
Q  180 actgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaat 244  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  9318980 actgctagttgttgttgttgtggatgctttgaagattctggttgatttttccattgttattgaat 9319044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 13462379 - 13462338
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13462379 attgattatgtttatatatttgttgaagatgatgaaaaggaa 13462338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 17278873 - 17278683
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  17278873 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaaaaaattaggaaatagatatgaa 17278774  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17278773 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 17278683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 30766118 - 30765989
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  30766118 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaa-aaattaggaaatagatatgaa 30766020  T
Q  278 gattttggttgatttgctttagggagattga 308  Q
    |||||||||||||||||||||||||||||||    
T  30766019 gattttggttgatttgctttagggagattga 30765989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 182 - 367
Target Start/End: Complemental strand, 8685185 - 8685003
Alignment:
Q  182 tgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaagatt 281  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||          |||  |||||||| |||||||||||    
T  8685185 tgctagttgttgttgttgtggatgttttgatgattttggttgatttttccattgttattaaatct---aaagaaaaaaaaaggaaatatatatgaagatt 8685089  T
Q  282 ttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||| ||||||    
T  8685088 ttggttgatttggtttagggagattgagaaattgtgttgtttagattgaaatggatgtttttgaatggaaaaattggttgttgatt 8685003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 17279001 - 17278918
Alignment:
Q  50 tttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17279001 tttggaaattggtgctgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 17278918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 30766241 - 30766163
Alignment:
Q  55 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30766241 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 30766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 17236431 - 17236335
Alignment:
Q  271 atatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||| | |||| ||||||||||||||||||    
T  17236431 atatgaagattttggttgatttggtctagggagattgagaaattgtattgtttagattgaaagggatgttttttaatggaaaaattggttattgatt 17236335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 30765995 - 30765951
Alignment:
Q  324 agattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30765995 agattgaaagagatgtttatgaatgaaaaaattggttattgatta 30765951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 17278673 - 17278632
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17278673 attgattatgtttatatatttgttgaagatgatgaaaaggaa 17278632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 30765941 - 30765903
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaag 399  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30765941 attgattatgtttatatatttgttgaagatgatgaaaag 30765903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 4e-88; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 178 - 402
Target Start/End: Complemental strand, 40680926 - 40680699
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaat---taggaaatagatat 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         |||    || |||||||||||    
T  40680926 caactgctagttgtagttgttgtggatgttttgaagattttggttgatttttccattgttattgaatctgaaaaaaaaaaaaaaaataagaaatagatat 40680827  T
Q  275 gaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgattatgttta 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40680826 gaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattgattattgattatgttta 40680727  T
Q  375 tatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||| ||||    
T  40680726 tatatttgttgaagatgatgaaatggaa 40680699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 9086920 - 9087111
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||||||||||||||    
T  9086920 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttctcattgttattgaatctgaaaaaaaaaaaattaggaaatagatatgaa 9087019  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatg-aaaaaattggttattgatta 368  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9087020 gattttggttgatttgttttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaaattggttattgatta 9087111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 9086793 - 9086875
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9086793 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 9086875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 40681054 - 40680972
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40681054 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 40680972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 13631104 - 13631204
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    |||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||    
T  13631104 tagatatgaagattttggatgatttggtttagagagattgataaattgtgttgtttagattgaaatggatgtttttgaatggaaaaattggttattgatt 13631203  T
Q  368 a 368  Q
    |    
T  13631204 a 13631204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 50282050 - 50281951
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||   | |||| |||||||| |||||||||    
T  50282050 tagatatgaagattttggttgatttggtctagggagattgagaaattgtattgtttagattgaaagggatgtaatttaatggaaaaattgattattgatt 50281951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 9087121 - 9087162
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9087121 attgattatgtttatatatttgttgaagatgatgaaaaggaa 9087162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 44182899 - 44182834
Alignment:
Q  301 gagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||| ||||| ||||||||||||    
T  44182899 gagattgagaaattgtattgtttagattgaaagggatgttttttaatggaaaaa-tggttattgatt 44182834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 395
Target Start/End: Complemental strand, 45044647 - 45044613
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatga 395  Q
    |||||||||||||||||||||| ||||||||||||    
T  45044647 attgattatgtttatatatttgatgaagatgatga 45044613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 7e-87; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 12261074 - 12261265
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnn-taaattaggaaatagatatga 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  12261074 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaaataaattaggaaatagatatga 12261173  T
Q  277 agattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12261174 agattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 12261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 16146550 - 16146362
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||    
T  16146550 caactgttagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctcgaaaaaa--aaattaggaaatagatatgaa 16146453  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146452 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 16146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 20746206 - 20746398
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnn-taaattaggaaatagatatga 276  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        |||||||||||||| ||||||    
T  20746206 caactgctagttgtagttgttgtggatgttttgaagattttagttgatttttccattgttattgaatctggaaaaaaaataaattaggaaatacatatga 20746305  T
Q  277 agattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatg-aaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20746306 agattttggttgatttgctttaggaagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaaattggttattgatta 20746398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 27129315 - 27129126
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaa-tagatatga 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        |||  |||||| |||||||||    
T  27129315 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctaggaaaaaaaaaa--aggaaaatagatatga 27129218  T
Q  277 agattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27129217 agattttggttgatttgctttagggagattgaaaaattgtgatgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 27129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 12260947 - 12261029
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12260947 ttggaaattggtgctgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 12261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 27129438 - 27129360
Alignment:
Q  55 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27129438 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 27129360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 901792 - 901693
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||    
T  901792 tagatatgaagattttggttgatttggtttagagagattgataaattgtgttgtttagattgaaagggatgttttttaatggaaaaattggttattgatt 901693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 20746079 - 20746161
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  20746079 ttggaaattggtgcccttcttcaaccttggattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtcac 20746161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 16146677 - 16146595
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  16146677 ttggaaattggtgccattcttcaaccttggattcaattgggtgttgtgctagttatcccaattggctttagcaccaaagtcac 16146595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 12261275 - 12261316
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12261275 attgattatgtttatatatttgttgaagatgatgaaaaggaa 12261316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 27129116 - 27129078
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaag 399  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27129116 attgattatgtttatatatttgttgaagatgatgaaaag 27129078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 402
Target Start/End: Complemental strand, 16146344 - 16146311
Alignment:
Q  369 tgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||    
T  16146344 tgtttatatatttgttgaagatgatgaaaaggaa 16146311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 393
Target Start/End: Original strand, 20746408 - 20746440
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgat 393  Q
    |||||||||||||||||||||||||||||||||    
T  20746408 attgattatgtttatatatttgttgaagatgat 20746440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 390
Target Start/End: Original strand, 20746452 - 20746481
Alignment:
Q  361 attgattatgtttatatatttgttgaagat 390  Q
    ||||||||||||||||||||||||||||||    
T  20746452 attgattatgtttatatatttgttgaagat 20746481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 3e-86; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 36142587 - 36142397
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  36142587 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaataataaattaggaaatagatatgaa 36142488  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  36142487 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatcaaaaaattgattattgatta 36142397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 47112566 - 47112376
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  47112566 caactgttaattgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaa 47112467  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47112466 tattttggttgatttgcttcagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 47112376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 178 - 402
Target Start/End: Complemental strand, 49652853 - 49652631
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgatttt-cccattgttattgaatctggnnnnnnntaaat----taggaaatagat 272  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||         |||     ||| ||||||||    
T  49652853 caactgctagttgtgattgttgtggatgttttgaagattttggttgatttttcccattgttattgaatctgaaggaaaaaaaaaaaactagaaaatagat 49652754  T
Q  273 atgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgattatgtt 372  Q
    || ||||||||||||       |||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  49652753 ataaagattttggtt-------tttaggaagattgagaaattgtgttgtttagattgaaagagatgtttataaatggaaaaattggttattgattatgtt 49652661  T
Q  373 tatatatttgttgaagatgatgaaaaggaa 402  Q
    |||| |||| |||||||| |||||||||||    
T  49652660 tatagatttattgaagataatgaaaaggaa 49652631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 24508580 - 24508484
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattg 364  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  24508580 tagatatgaagattttggttgatttggtctagggagattgagaaattgtgttgtttagattgaaagggatgttttttaatgaaaaaattggttattg 24508484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 49653266 - 49653184
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  49653266 ttggaaattggtgtcgttcttcaaccttggattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtcac 49653184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 36142710 - 36142632
Alignment:
Q  55 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  36142710 aaatcggtgtcgttcttcaaccttggattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtcac 36142632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 47112693 - 47112611
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  47112693 ttggaaattggtgtcgttcttcaatcttgaattcaattgggtgttgtgctagttatcccaattggatttagcaccaaagtcac 47112611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 52750537 - 52750437
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatg-tttatgaatgaaaaaattggttattgat 366  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||| ||| | |||| |||||||||||||||||    
T  52750537 tagatataaagattttggttgatttggtttaggaagattgagaaattgtgttgttttgattgaaagggatgtttttttaatggaaaaattggttattgat 52750438  T
Q  367 t 367  Q
    |    
T  52750437 t 52750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 35122777 - 35122699
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaag 129  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  35122777 ttggaaatcggtgtcgttcatcaaccttggattcaattgggtgttgtgctagttatcccagttggatttagcaccaaag 35122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 36142387 - 36142346
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36142387 attgattatgtttatatatttgttgaagatgatgaaaaggaa 36142346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 47112366 - 47112325
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  47112366 attgattatgtttatatatttgttgaagatgatgaagaggaa 47112325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 6e-84; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 6794368 - 6794556
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  6794368 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaa--aaattaggaaatagatatgaa 6794465  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6794466 gattttggttgatttgttttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 6794556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 23083012 - 23082823
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  23083012 caactactagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaa 23082913  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23082912 gattttggttgatttgctttagggag-ttgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 23082823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 6794245 - 6794323
Alignment:
Q  55 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6794245 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaaatcac 6794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 23083139 - 23083058
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtca 132  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23083139 ttggaaaatggtgtcgttcttcaaccttggattcaattgggtgttgtgctagtcaaccaaattggatttagcaccaaagtca 23083058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 210 - 341
Target Start/End: Original strand, 22165801 - 22165930
Alignment:
Q  210 gaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaagattttggttgatttgctttagggagattgag 309  Q
    |||| |||||||||||||||||||||||| || |||||         ||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  22165801 gaaggttttggttgattttcccattgttagtggatctgaaaaaag--aaattaggaaatagatatgaagattttggttgatttgatttatggagattgag 22165898  T
Q  310 aaattgtgttgtttagattgaaagagatgttt 341  Q
    || |||||||||||  | |||||| |||||||    
T  22165899 aatttgtgttgtttgaaatgaaagtgatgttt 22165930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 6794566 - 6794604
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaag 399  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6794566 attgattatgtttatatatttgttgaagatgatgaaaag 6794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 23082813 - 23082772
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  23082813 attgattatgtttatatatttattgaagatgatgaaaaggaa 23082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 6e-84; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 28189920 - 28189730
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  28189920 caactgctagttgtagttgttgtggatgttttgaagatttttgttgattttcccattgttattgaatctggaaaaaaaaaaattaggaaatagatatgaa 28189821  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28189820 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattgattattgatta 28189730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 19298154 - 19298344
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  19298154 caactgttagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaa 19298253  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19298254 gattttggttgatttgttttaggaagattgagaaattgtgttgtgtagattgaaagagatgtttatgaatgaaaaaattggttattgatta 19298344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 40468675 - 40468869
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  40468675 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggaaaaaaataaattaggaaatagatatgaa 40468774  T
Q  278 gattttggttgatttgct----ttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40468775 gattttggttgatttgctttaattagggagattgagaaattgtgttgtttagattgaaatagatgtttatgaatgaaaaaattggttattgatta 40468869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 8029593 - 8029783
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||        ||||||||||||||||||||||    
T  8029593 caactgctagttgtagttgttgtggatgttttgaagattttggttgatttttctattgttattgaatctgaaaaaaaataaattaggaaatagatatgaa 8029692  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8029693 gattttggttgatttgctttatggagattgagaaattgtgttgtatagattgaaagagatgtttatgaatgaaaaaattggttattgatta 8029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 20686102 - 20685914
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnntaaattaggaaatagatatgaa 277  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||    
T  20686102 caactgctagttgtagttgttgtgaatgttttgaagattttggttgattttcccattgttattgaatttggaaaaaaa-aaattaggaaatagatatgaa 20686004  T
Q  278 gattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20686003 gattt-ggttgatttgctttagggagattgagaaattgtgttgtttagattgaaatagatgtttatgaatgaaaaaattggttattgatta 20685914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 8029465 - 8029548
Alignment:
Q  50 tttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8029465 tttggaaattggtgctgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 8029548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 28190043 - 28189965
Alignment:
Q  55 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28190043 aaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaaatcac 28189965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 3093522 - 3093423
Alignment:
Q  268 tagatatgaagattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatt 367  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||| ||| | |||| ||||||||||||||||||    
T  3093522 tagatataaagattttggttgatttggtttagggagattgataaattgtgttgttttgattgaaagggatattttttaatggaaaaattggttattgatt 3093423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 19298027 - 19298109
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  19298027 ttggaaattggtgcccttcttcaaccttggattcaattgggtgttgtgctagttatcctaattggatttagcaccaaagtcac 19298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 20686229 - 20686147
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtgctagttaaccaaattggatttagcaccaaagtcac 133  Q
    |||||||||||||| |||||||||||||| |||||||||||  |||||||||||| || ||||| ||||||||||||||||||    
T  20686229 ttggaaattggtgtcgttcttcaaccttgaattcaattgggcattgtgctagttatcccaattgaatttagcaccaaagtcac 20686147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 40468545 - 40468630
Alignment:
Q  51 ttggaaattggtgttgttcttcaaccttggattcaattgggtgttgtg---ctagttaaccaaattggatttagcaccaaagtcac 133  Q
    ||||||| |||||  ||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||    
T  40468545 ttggaaaatggtgccgttattcaaccttggattcaattgggtgttgtggtgctagttaaccaaattggatttagcaccaaaatcac 40468630  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 361 - 438
Target Start/End: Complemental strand, 20685904 - 20685827
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaaggnnnnnnnntctggtttggtgtgttgttgatgatg 438  Q
    |||||||||||||||||||||||||||||||||||||||||||         ||||| ||||||||||||||||||||    
T  20685904 attgattatgtttatatatttgttgaagatgatgaaaaggaagaaaaaaaaatctgggttggtgtgttgttgatgatg 20685827  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 40468879 - 40468920
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40468879 attgattatgtttatatatttgttgaagatgatgaaaaggaa 40468920  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 8029793 - 8029834
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  8029793 attgattatgtttatatatttgttgaagacgatgtaaaggaa 8029834  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 402
Target Start/End: Original strand, 19298362 - 19298395
Alignment:
Q  369 tgtttatatatttgttgaagatgatgaaaaggaa 402  Q
    ||||||||||||||||||||||||||||||||||    
T  19298362 tgtttatatatttgttgaagatgatgaaaaggaa 19298395  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 35738919 - 35738881
Alignment:
Q  209 tgaagattttggttgattttcccattgttattgaatctg 247  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  35738919 tgaagattttggttgattttccaattgttagtgaatctg 35738881  T

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Target: scaffold0202 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 178 - 368
Target Start/End: Original strand, 21791 - 21982
Alignment:
Q  178 caactgctagttgtagttgttgtggatgttttgaagattttggttgattttcccattgttattgaatctggnnnnnnn-taaattaggaaatagatatga 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||| ||||||||||||||||    
T  21791 caactgctagttgtagttgttgtggatgttttgaagattttggttgatttttccattgttattgaatctggaaaataaataaaataggaaatagatatga 21890  T
Q  277 agattttggttgatttgctttagggagattgagaaattgtgttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 368  Q
    || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21891 aggttttggttgatttgctttagggagattgagaaattgagttgtttagattgaaagagatgtttatgaatgaaaaaattggttattgatta 21982  T

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Target: scaffold0202; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 21992 - 22029
Alignment:
Q  361 attgattatgtttatatatttgttgaagatgatgaaaa 398  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21992 attgattatgtttatagatttgttgaagatgatgaaaa 22029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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