View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13523_high_9 (Length: 315)

Name: NF13523_high_9
Description: NF13523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13523_high_9
NF13523_high_9
[»] chr3 (57 HSPs)
chr3 (4-296)||(54950025-54950321)
chr3 (169-287)||(46894812-46894931)
chr3 (169-287)||(47410762-47410881)
chr3 (169-287)||(27396853-27396971)
chr3 (169-289)||(15003625-15003746)
chr3 (169-287)||(10228956-10229075)
chr3 (177-290)||(28731843-28731957)
chr3 (169-289)||(8381076-8381197)
chr3 (169-289)||(24273890-24274011)
chr3 (169-288)||(4976718-4976838)
chr3 (161-288)||(10047870-10047998)
chr3 (169-288)||(13525167-13525287)
chr3 (169-287)||(4232187-4232306)
chr3 (177-287)||(4833127-4833238)
chr3 (169-290)||(46838737-46838859)
chr3 (169-287)||(3917765-3917884)
chr3 (217-288)||(10752326-10752397)
chr3 (169-287)||(32960988-32961107)
chr3 (169-288)||(41464662-41464784)
chr3 (170-287)||(18271576-18271693)
chr3 (169-291)||(29212073-29212198)
chr3 (161-253)||(10473916-10474009)
chr3 (169-288)||(24650556-24650677)
chr3 (220-287)||(19961368-19961435)
chr3 (178-288)||(30552987-30553098)
chr3 (171-289)||(32590969-32591088)
chr3 (183-284)||(43904519-43904622)
chr3 (170-276)||(46800044-46800150)
chr3 (169-253)||(3440759-3440844)
chr3 (169-288)||(28266524-28266645)
chr3 (177-289)||(40559671-40559784)
chr3 (169-289)||(42296709-42296829)
chr3 (169-288)||(8507930-8508050)
chr3 (169-287)||(11029662-11029782)
chr3 (168-287)||(24751752-24751872)
chr3 (169-272)||(43426582-43426686)
chr3 (177-288)||(44107379-44107490)
chr3 (169-283)||(1242220-1242335)
chr3 (169-287)||(17500926-17501045)
chr3 (169-287)||(22371449-22371567)
chr3 (169-200)||(32597355-32597386)
chr3 (169-287)||(43897973-43898092)
chr3 (236-287)||(49285507-49285558)
chr3 (161-200)||(53669713-53669752)
chr3 (169-202)||(2558832-2558865)
chr3 (169-253)||(8128300-8128385)
chr3 (182-271)||(9318533-9318622)
chr3 (177-214)||(30740933-30740970)
chr3 (169-253)||(33886380-33886465)
chr3 (169-253)||(34481802-34481887)
chr3 (161-198)||(41921586-41921623)
chr3 (169-253)||(47069040-47069125)
chr3 (177-253)||(48209449-48209526)
chr3 (169-287)||(37124215-37124335)
chr3 (169-287)||(43605585-43605705)
chr3 (169-284)||(50238850-50238966)
chr3 (169-283)||(52256762-52256878)
[»] chr8 (64 HSPs)
chr8 (169-287)||(21530779-21530898)
chr8 (170-288)||(25250783-25250902)
chr8 (169-287)||(24654973-24655092)
chr8 (169-287)||(27928157-27928276)
chr8 (169-287)||(34711565-34711684)
chr8 (163-272)||(10006160-10006270)
chr8 (169-284)||(23681012-23681128)
chr8 (169-284)||(26690696-26690812)
chr8 (169-287)||(4312132-4312251)
chr8 (169-283)||(10096615-10096730)
chr8 (161-287)||(11098076-11098203)
chr8 (169-291)||(38070491-38070614)
chr8 (169-290)||(14188086-14188208)
chr8 (169-288)||(27544926-27545046)
chr8 (169-288)||(31639112-31639232)
chr8 (169-288)||(34143364-34143484)
chr8 (170-289)||(34744277-34744397)
chr8 (177-288)||(36586480-36586592)
chr8 (169-287)||(4430745-4430864)
chr8 (169-287)||(5704638-5704757)
chr8 (169-287)||(6317299-6317418)
chr8 (177-287)||(19649516-19649627)
chr8 (169-287)||(40744252-40744371)
chr8 (161-283)||(44814866-44814989)
chr8 (169-289)||(18040133-18040254)
chr8 (161-288)||(2508136-2508264)
chr8 (169-288)||(4977044-4977164)
chr8 (169-284)||(14243701-14243817)
chr8 (177-288)||(15129635-15129744)
chr8 (169-287)||(27849753-27849872)
chr8 (177-284)||(37295128-37295236)
chr8 (177-288)||(37817374-37817486)
chr8 (169-288)||(38953490-38953610)
chr8 (169-287)||(26737970-26738089)
chr8 (169-287)||(35421629-35421747)
chr8 (169-215)||(7882928-7882974)
chr8 (232-286)||(11908229-11908283)
chr8 (169-238)||(36055517-36055587)
chr8 (169-253)||(25063373-25063458)
chr8 (169-289)||(25199043-25199164)
chr8 (169-253)||(27817459-27817544)
chr8 (169-293)||(39666905-39667030)
chr8 (169-253)||(40772575-40772660)
chr8 (169-253)||(42158592-42158677)
chr8 (177-275)||(14258314-14258411)
chr8 (169-288)||(40344488-40344607)
chr8 (169-287)||(2733615-2733733)
chr8 (177-251)||(17919833-17919908)
chr8 (169-200)||(36442393-36442424)
chr8 (169-287)||(42650167-42650286)
chr8 (237-287)||(10286544-10286594)
chr8 (217-287)||(22762003-22762073)
chr8 (217-287)||(43820867-43820937)
chr8 (217-286)||(403666-403735)
chr8 (169-289)||(7772060-7772181)
chr8 (161-202)||(31941036-31941077)
chr8 (177-253)||(34642455-34642532)
chr8 (217-286)||(41746707-41746776)
chr8 (217-289)||(1258709-1258781)
chr8 (229-289)||(3054021-3054081)
chr8 (169-284)||(25893853-25893969)
chr8 (169-284)||(26675559-26675675)
chr8 (169-284)||(34540074-34540190)
chr8 (177-288)||(37708465-37708577)
[»] chr2 (42 HSPs)
chr2 (169-287)||(40812016-40812135)
chr2 (169-288)||(727299-727419)
chr2 (169-288)||(35476500-35476620)
chr2 (169-288)||(44948017-44948137)
chr2 (169-287)||(36794803-36794922)
chr2 (169-288)||(13267985-13268105)
chr2 (161-273)||(37198733-37198846)
chr2 (177-288)||(23957050-23957162)
chr2 (169-288)||(45049383-45049503)
chr2 (169-287)||(20251495-20251614)
chr2 (169-287)||(36754751-36754870)
chr2 (169-286)||(39070019-39070137)
chr2 (169-289)||(4014823-4014944)
chr2 (169-289)||(42200872-42200993)
chr2 (169-284)||(34481681-34481797)
chr2 (169-287)||(3048541-3048660)
chr2 (169-287)||(12236120-12236239)
chr2 (169-287)||(15897213-15897332)
chr2 (170-288)||(28855425-28855544)
chr2 (169-287)||(34667043-34667162)
chr2 (169-288)||(5887569-5887686)
chr2 (218-288)||(40592311-40592381)
chr2 (244-289)||(433135-433180)
chr2 (161-202)||(7315763-7315804)
chr2 (169-289)||(11061380-11061500)
chr2 (177-253)||(12541354-12541431)
chr2 (169-287)||(32023251-32023371)
chr2 (161-288)||(41164650-41164778)
chr2 (169-288)||(43035438-43035558)
chr2 (177-284)||(43461352-43461460)
chr2 (217-281)||(18251377-18251443)
chr2 (170-287)||(23080108-23080227)
chr2 (183-288)||(30854759-30854866)
chr2 (217-288)||(42007274-42007345)
chr2 (169-202)||(6590968-6591001)
chr2 (169-253)||(11543809-11543894)
chr2 (169-202)||(19593608-19593641)
chr2 (169-237)||(36754997-36755066)
chr2 (169-288)||(38490409-38490530)
chr2 (244-288)||(12847041-12847085)
chr2 (232-288)||(18999327-18999383)
chr2 (169-201)||(38082918-38082950)
[»] chr1 (44 HSPs)
chr1 (170-288)||(29510662-29510781)
chr1 (169-287)||(25820960-25821079)
chr1 (169-287)||(43676034-43676153)
chr1 (169-290)||(40958584-40958706)
chr1 (169-289)||(19338188-19338309)
chr1 (169-289)||(48391953-48392074)
chr1 (169-288)||(50248027-50248147)
chr1 (171-288)||(29005088-29005206)
chr1 (172-288)||(39787663-39787780)
chr1 (169-288)||(40685527-40685647)
chr1 (169-288)||(12282613-12282732)
chr1 (169-289)||(10635486-10635608)
chr1 (188-281)||(11797428-11797522)
chr1 (183-288)||(32533825-32533931)
chr1 (169-238)||(35758323-35758393)
chr1 (178-287)||(40503596-40503706)
chr1 (170-287)||(48314166-48314284)
chr1 (169-289)||(15104041-15104162)
chr1 (169-289)||(15906177-15906298)
chr1 (169-272)||(20164083-20164187)
chr1 (169-284)||(24119658-24119774)
chr1 (161-288)||(34010092-34010220)
chr1 (181-275)||(1576385-1576480)
chr1 (169-287)||(27078548-27078666)
chr1 (161-287)||(36586250-36586377)
chr1 (169-262)||(23225300-23225394)
chr1 (169-278)||(33845614-33845724)
chr1 (169-278)||(33948254-33948364)
chr1 (169-289)||(43025883-43026009)
chr1 (169-253)||(21522350-21522435)
chr1 (177-289)||(32880597-32880710)
chr1 (161-281)||(33132738-33132859)
chr1 (169-288)||(4126573-4126693)
chr1 (177-287)||(5598300-5598411)
chr1 (177-287)||(43086489-43086600)
chr1 (177-287)||(49948240-49948351)
chr1 (169-297)||(10430349-10430479)
chr1 (177-253)||(15331080-15331157)
chr1 (161-202)||(16261176-16261217)
chr1 (177-253)||(47429610-47429687)
chr1 (181-288)||(5511781-5511889)
chr1 (181-288)||(17068150-17068258)
chr1 (230-290)||(30455200-30455260)
chr1 (169-272)||(43500153-43500257)
[»] chr7 (53 HSPs)
chr7 (161-290)||(4069118-4069248)
chr7 (177-284)||(38261003-38261111)
chr7 (169-287)||(48612516-48612635)
chr7 (169-288)||(3497527-3497647)
chr7 (169-289)||(40013260-40013382)
chr7 (161-289)||(18944921-18945050)
chr7 (169-289)||(35157094-35157215)
chr7 (169-288)||(47086310-47086431)
chr7 (161-288)||(4106552-4106680)
chr7 (169-288)||(4887523-4887643)
chr7 (169-276)||(7264415-7264523)
chr7 (177-288)||(37117863-37117975)
chr7 (169-287)||(6327210-6327329)
chr7 (169-287)||(31717296-31717415)
chr7 (161-291)||(6596537-6596666)
chr7 (169-289)||(26794909-26795032)
chr7 (181-288)||(47584693-47584801)
chr7 (170-288)||(1573852-1573971)
chr7 (177-287)||(5523792-5523903)
chr7 (169-287)||(10061026-10061145)
chr7 (161-281)||(21226070-21226191)
chr7 (169-281)||(6369533-6369645)
chr7 (169-281)||(6377998-6378110)
chr7 (169-284)||(7312463-7312579)
chr7 (169-288)||(29151581-29151701)
chr7 (176-283)||(37919972-37920080)
chr7 (183-289)||(41780260-41780365)
chr7 (170-272)||(990229-990332)
chr7 (177-287)||(10422477-10422588)
chr7 (169-271)||(16816706-16816809)
chr7 (161-287)||(33628027-33628154)
chr7 (169-287)||(45041743-45041862)
chr7 (169-253)||(4227367-4227452)
chr7 (169-253)||(19258457-19258542)
chr7 (161-253)||(43133105-43133198)
chr7 (169-272)||(5508699-5508803)
chr7 (169-272)||(11074952-11075055)
chr7 (177-288)||(17895632-17895744)
chr7 (169-251)||(1869851-1869934)
chr7 (169-287)||(3861346-3861465)
chr7 (217-288)||(9379989-9380060)
chr7 (177-283)||(10166873-10166979)
chr7 (217-287)||(33228698-33228769)
chr7 (169-251)||(40656118-40656201)
chr7 (169-287)||(40809044-40809163)
chr7 (177-291)||(45946705-45946820)
chr7 (169-287)||(46416548-46416667)
chr7 (169-286)||(27396324-27396442)
chr7 (169-253)||(28649376-28649461)
chr7 (177-272)||(30627637-30627734)
chr7 (169-237)||(40011999-40012068)
chr7 (217-289)||(46715749-46715822)
chr7 (169-284)||(4674319-4674435)
[»] scaffold0515 (1 HSPs)
scaffold0515 (169-288)||(2476-2596)
[»] scaffold0306 (1 HSPs)
scaffold0306 (169-288)||(2476-2596)
[»] chr4 (57 HSPs)
chr4 (161-287)||(14285094-14285221)
chr4 (169-287)||(31263511-31263630)
chr4 (169-288)||(7512765-7512885)
chr4 (177-288)||(28983730-28983842)
chr4 (169-287)||(49882719-49882838)
chr4 (161-272)||(1052885-1052997)
chr4 (169-288)||(9569473-9569593)
chr4 (169-288)||(41323532-41323652)
chr4 (169-288)||(49319729-49319849)
chr4 (169-287)||(13389019-13389138)
chr4 (169-287)||(24712087-24712206)
chr4 (169-287)||(29894409-29894528)
chr4 (169-288)||(13632087-13632208)
chr4 (161-281)||(35615890-35616011)
chr4 (169-287)||(5396950-5397069)
chr4 (217-284)||(5880345-5880412)
chr4 (169-287)||(30044594-30044713)
chr4 (169-287)||(35318539-35318658)
chr4 (169-286)||(42411998-42412116)
chr4 (161-281)||(17271304-17271425)
chr4 (169-272)||(579252-579356)
chr4 (169-287)||(12821164-12821281)
chr4 (169-284)||(33416590-33416706)
chr4 (169-272)||(39997783-39997887)
chr4 (169-287)||(42154147-42154267)
chr4 (169-288)||(46488127-46488247)
chr4 (169-283)||(18813373-18813488)
chr4 (169-287)||(23974652-23974771)
chr4 (179-281)||(24407502-24407605)
chr4 (161-287)||(28010053-28010180)
chr4 (169-287)||(34684202-34684320)
chr4 (169-255)||(48628474-48628561)
chr4 (169-283)||(54907902-54908017)
chr4 (161-253)||(7944226-7944319)
chr4 (169-288)||(29428053-29428173)
chr4 (169-289)||(35828271-35828394)
chr4 (169-272)||(37050715-37050819)
chr4 (177-288)||(47462054-47462166)
chr4 (177-288)||(51675685-51675797)
chr4 (161-200)||(12315932-12315971)
chr4 (177-283)||(18371349-18371456)
chr4 (169-287)||(24550812-24550931)
chr4 (177-287)||(31375112-31375223)
chr4 (161-200)||(32104012-32104051)
chr4 (177-283)||(54096958-54097065)
chr4 (177-278)||(25586345-25586447)
chr4 (169-282)||(37166142-37166256)
chr4 (183-287)||(939586-939691)
chr4 (244-289)||(5060496-5060541)
chr4 (161-202)||(6328853-6328894)
chr4 (169-202)||(11310186-11310219)
chr4 (169-281)||(17846760-17846873)
chr4 (169-202)||(31583613-31583646)
chr4 (241-278)||(43173646-43173683)
chr4 (169-202)||(55853337-55853370)
chr4 (244-288)||(36752357-36752401)
chr4 (177-284)||(54864398-54864506)
[»] scaffold0287 (1 HSPs)
scaffold0287 (169-288)||(1068-1188)
[»] chr5 (66 HSPs)
chr5 (169-288)||(42448209-42448329)
chr5 (169-287)||(23311183-23311302)
chr5 (169-287)||(26802333-26802452)
chr5 (169-287)||(26809883-26810002)
chr5 (169-287)||(26824910-26825029)
chr5 (169-289)||(24652324-24652445)
chr5 (169-289)||(25328314-25328435)
chr5 (169-288)||(11968774-11968894)
chr5 (169-272)||(27389937-27390041)
chr5 (169-284)||(29119608-29119724)
chr5 (169-288)||(33028228-33028348)
chr5 (169-287)||(4617776-4617895)
chr5 (169-287)||(16496599-16496718)
chr5 (169-287)||(17869134-17869253)
chr5 (169-287)||(18115092-18115211)
chr5 (169-287)||(36569278-36569397)
chr5 (169-287)||(40044926-40045045)
chr5 (169-285)||(38682929-38683046)
chr5 (169-288)||(4164957-4165077)
chr5 (169-288)||(29806565-29806685)
chr5 (208-288)||(39143439-39143519)
chr5 (177-288)||(39150944-39151056)
chr5 (161-287)||(1650290-1650417)
chr5 (169-287)||(6672240-6672359)
chr5 (169-287)||(18473913-18474032)
chr5 (169-287)||(41562457-41562576)
chr5 (161-290)||(1269521-1269651)
chr5 (169-289)||(18625625-18625746)
chr5 (169-253)||(34856614-34856699)
chr5 (172-287)||(1244194-1244310)
chr5 (169-287)||(23074654-23074774)
chr5 (177-253)||(29622238-29622314)
chr5 (169-272)||(34930239-34930343)
chr5 (177-287)||(9053989-9054100)
chr5 (170-288)||(12665093-12665212)
chr5 (177-287)||(24051402-24051513)
chr5 (169-287)||(24443877-24443996)
chr5 (171-287)||(1287314-1287431)
chr5 (183-287)||(7179325-7179430)
chr5 (161-202)||(36105127-36105168)
chr5 (170-262)||(36259821-36259914)
chr5 (169-253)||(36854168-36854253)
chr5 (169-288)||(671069-671189)
chr5 (177-288)||(2103024-2103136)
chr5 (169-284)||(12819556-12819671)
chr5 (182-289)||(17080462-17080570)
chr5 (181-288)||(28143254-28143362)
chr5 (169-288)||(37067699-37067816)
chr5 (169-272)||(37191258-37191362)
chr5 (177-288)||(42068539-42068651)
chr5 (181-276)||(42653551-42653647)
chr5 (177-287)||(10165531-10165642)
chr5 (169-200)||(16371482-16371513)
chr5 (161-200)||(16906429-16906468)
chr5 (217-283)||(6053110-6053176)
chr5 (217-283)||(10154221-10154287)
chr5 (182-282)||(2025704-2025805)
chr5 (171-287)||(6041856-6041973)
chr5 (169-202)||(9640544-9640577)
chr5 (161-198)||(10109897-10109934)
chr5 (161-253)||(29293524-29293617)
chr5 (183-287)||(36136886-36136991)
chr5 (161-213)||(19867283-19867335)
chr5 (217-289)||(23219179-23219251)
chr5 (228-288)||(23310398-23310458)
chr5 (177-284)||(36246012-36246119)
[»] scaffold0002 (1 HSPs)
scaffold0002 (169-287)||(411647-411766)
[»] chr6 (31 HSPs)
chr6 (170-287)||(4083586-4083704)
chr6 (169-288)||(8448152-8448272)
chr6 (169-288)||(8456956-8457076)
chr6 (169-288)||(8939624-8939744)
chr6 (169-284)||(18861777-18861893)
chr6 (169-283)||(2958996-2959111)
chr6 (161-272)||(6266646-6266758)
chr6 (169-287)||(7098805-7098924)
chr6 (169-287)||(10181044-10181163)
chr6 (177-287)||(10531385-10531496)
chr6 (169-288)||(735443-735561)
chr6 (169-289)||(4480471-4480592)
chr6 (169-289)||(31205193-31205314)
chr6 (169-287)||(5603457-5603576)
chr6 (169-287)||(8329568-8329687)
chr6 (177-287)||(8374141-8374252)
chr6 (169-288)||(32643734-32643858)
chr6 (177-253)||(2395575-2395652)
chr6 (169-253)||(12795029-12795114)
chr6 (189-288)||(28594101-28594201)
chr6 (169-200)||(5626070-5626101)
chr6 (218-284)||(11152519-11152585)
chr6 (161-238)||(34539340-34539418)
chr6 (169-272)||(2301388-2301493)
chr6 (244-289)||(3456474-3456519)
chr6 (161-202)||(4891093-4891134)
chr6 (169-253)||(5660432-5660517)
chr6 (169-288)||(10330802-10330923)
chr6 (184-287)||(10263096-10263200)
chr6 (184-287)||(14982679-14982783)
chr6 (217-289)||(17534582-17534654)
[»] scaffold0402 (1 HSPs)
scaffold0402 (169-289)||(1251-1372)
[»] scaffold0061 (1 HSPs)
scaffold0061 (169-287)||(8869-8988)
[»] scaffold0008 (1 HSPs)
scaffold0008 (169-287)||(39323-39442)
[»] scaffold0364 (1 HSPs)
scaffold0364 (177-262)||(12002-12088)
[»] scaffold0432 (1 HSPs)
scaffold0432 (161-287)||(9366-9494)
[»] scaffold0595 (1 HSPs)
scaffold0595 (169-287)||(344-463)
[»] scaffold0457 (1 HSPs)
scaffold0457 (169-283)||(6782-6897)
[»] scaffold0778 (1 HSPs)
scaffold0778 (169-283)||(821-937)
[»] scaffold0204 (1 HSPs)
scaffold0204 (169-272)||(2768-2872)
[»] scaffold0684 (1 HSPs)
scaffold0684 (161-253)||(2194-2287)
[»] scaffold0548 (1 HSPs)
scaffold0548 (169-202)||(8183-8216)


Alignment Details
Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 54950321 - 54950025
Alignment:
Q  4 taattaacgtgcgatttggttcggaccagaaggcagtagtacgcgatttatctccgtttttttatggatgatgttatcggnnnnnnnnnnactaaataaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||||    
T  54950321 taattaacgtgcgatttggttcggaccagaaggcagtagtacgcgatttatctccgtttttttatggatcatgttatcggttttttttttactaaataaa 54950222  T
Q  104 aaattcaatgctagttttgcaccgttggttaaataaaaatcattaacgga----nnnnnnnagataggtgaaatggtaaagccattataaactcacacac 199  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||           ||||||  ||||||  ||||| |||||||||||||| ||    
T  54950221 aaattcaatgctagttttgcaccgtctgttaaataaaaatcattaacggatttttttcggtagatagacgaaatgacaaagctattataaactcacatac 54950122  T
Q  200 atacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatatcattaac 296  Q
    ||| |||||||||||| ||||||||||  |||||||||  ||| |||||||||||  |||||||||||||||||||  |||||||||||||||||||    
T  54950121 atatctgaaggtaccaggttcgaacctttgtcatggcacccgacctaacaattttagaattttgtcagttgagttaagacttctggatatcattaac 54950025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 46894931 - 46894812
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||| |  | ||||||||||||||||||||| ||  |||||||||| || ||||||||||    
T  46894931 gaaatggaaaagccaatataaactcacacacataagtgaaggtatcggggttcgaacctcggtcatggcatccggcctaacaatttcgatattttgtcag 46894832  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  46894831 ttgagctaggacttctggat 46894812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 47410762 - 47410881
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||| |||||||| ||| ||| |||||||||| || |||||| |||    
T  47410762 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccgacctaacaatttcgacattttgccag 47410861  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  47410862 ttgagctaggacttctggat 47410881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 27396971 - 27396853
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||  ||||||||| |||||||||||| ||  |||||||||| |  |||||||||||    
T  27396971 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccgggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgtcagt 27396872  T
Q  269 tgagttagaacttctggat 287  Q
    |||| ||| ||||||||||    
T  27396871 tgagctaggacttctggat 27396853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 15003746 - 15003625
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||| ||| ||| ||||||||||||  |||||| |||    
T  15003746 gaaatggcaaagccattataaactcacacacataggtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaattttggcattttgccag 15003647  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||  ||| ||||||||||||    
T  15003646 ttgaactaggacttctggatat 15003625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 10229075 - 10228956
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  10229075 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 10228976  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||  ||||||||||    
T  10228975 ttgagttaagacttctggat 10228956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 28731957 - 28731843
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| |||| |||||||||||||| |  ||||||||||  | |||||||| || ||||||||| ||| |||||||||| || ||||||||||||||| ||    
T  28731957 aaagtcattgtaaactcacacacacaagtgaaggtaccgggattcgaaccccgatcatggcatccgacctaacaatttcgacattttgtcagttgagcta 28731858  T
Q  276 gaacttctggatatc 290  Q
    |||||||| ||||||    
T  28731857 gaacttctagatatc 28731843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 8381197 - 8381076
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  8381197 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 8381098  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  8381097 ttgagctaggacttctggatat 8381076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 24273890 - 24274011
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||| | |||||||||   |||||||||| ||  |||||||||| |  ||||||||||    
T  24273890 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgaagttcgaaccctagtcatggcatccggcctaacaatttcggcattttgtcag 24273989  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||||||| |||||| |||||    
T  24273990 ttgagttaggacttctagatat 24274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 4976718 - 4976838
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||| ||||||| |  || |||||||  | |||||||| |||||||||||| ||  ||||||||||||  |||||| |||    
T  4976718 gaaatggcaaagccattataaactaacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattttggcattttgccag 4976817  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  4976818 ttgagctaggacttctggata 4976838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 288
Target Start/End: Complemental strand, 10047998 - 10047870
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  |||||||||||  ||||||||| |||||||||||| ||   ||||||||| |  ||    
T  10047998 agataggcgaaatggcaaagccattataaactcacacacacaagtgaaggtaccagagttcgaaccccggtcatggcatccggcataacaatttcggcat 10047899  T
Q  260 tttgtcagttgagttagaacttctggata 288  Q
    |||  || ||||| ||| |||||||||||    
T  10047898 tttaccaattgagctaggacttctggata 10047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 13525287 - 13525167
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  13525287 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 13525188  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  13525187 ttgagctaggacttctggata 13525167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 4232187 - 4232306
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  4232187 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 4232286  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  4232287 ttgagctaggacttctggat 4232306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 4833127 - 4833238
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  ||||||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  4833127 aaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 4833226  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  4833227 ggacttctggat 4833238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 46838737 - 46838859
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||   |||||| || |||||||||||| ||  |||||||||| |  |||||  |||    
T  46838737 gaaatgggaaagccattataaactcacacacacaagtgaaggtaccggagttcgagccccggtcatggcatccggcctaacaatttcggcatttttccag 46838836  T
Q  268 ttgagttagaacttctggatatc 290  Q
    ||||| ||| |||||||||||||    
T  46838837 ttgagctaggacttctggatatc 46838859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 3917884 - 3917765
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  3917884 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 3917785  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  3917784 ttgagctaggacttctggat 3917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 10752397 - 10752326
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    |||||||||||||||||| |||  | |||||||||||||| ||||||||||||||  |||||||| ||||||    
T  10752397 gttcgaacctcggtcatgacataaggtctaacaattttgacattttgtcagttgaactagaacttgtggata 10752326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 32960988 - 32961107
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||||||  |  |||||||||| |  |||||| |||    
T  32960988 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatctggcctaacaatttcggcattttgccag 32961087  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  32961088 ttgagctaggacttctggat 32961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 41464784 - 41464662
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 265  Q
    ||||||| |||||||||||||||||||||||| ||   || ||||||   | |||||||| |||||||||||| ||| |||||||||| |  |||||| |    
T  41464784 gaaatggcaaagccattataaactcacacacacacaagtggaggtactggggttcgaaccccggtcatggcatccgacctaacaatttcggcattttgcc 41464685  T
Q  266 agttgagttagaacttctggata 288  Q
    ||||||| ||| |||||||||||    
T  41464684 agttgagctaggacttctggata 41464662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 18271693 - 18271576
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| |||| ||||||||||||||| ||| |  || |||||||  | ||| |||| || ||||||||| ||| |||||||||| |  |||||||||||    
T  18271693 aaatggcaaagtcattataaactcacatacacaagtggaggtaccgagattcaaacc-cgatcatggcatccgacctaacaatttcggcattttgtcagt 18271595  T
Q  269 tgagttagaacttctggat 287  Q
    |||||||||||||||||||    
T  18271594 tgagttagaacttctggat 18271576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 29212073 - 29212198
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 265  Q
    ||||||| |||||||||||||||||||||||| ||   || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |    
T  29212073 gaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcc 29212172  T
Q  266 agttgagttagaacttctggatatca 291  Q
    ||||||| ||| |||| |||||||||    
T  29212173 agttgagctaggacttatggatatca 29212198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 10473916 - 10474009
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  10473916 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 10474009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 24650556 - 24650677
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||||||||||||| |||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||    
T  24650556 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcca 24650655  T
Q  267 gttgagttagaacttctggata 288  Q
    |||||| ||| |||||||||||    
T  24650656 gttgaggtaggacttctggata 24650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 19961435 - 19961368
Alignment:
Q  220 cgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 287  Q
    |||||| | |||||| ||| ||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  19961435 cgaaccccagtcatgacatccgacctaacaatttcgacattttgtcagttgagttaggacttctggat 19961368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 288
Target Start/End: Original strand, 30552987 - 30553098
Alignment:
Q  178 aagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 276  Q
    ||||||||||||||||||||||| |  || ||||| |  | |||||||  |||||||||||| || ||||||||||| |  |||||| |||||||| |||    
T  30552987 aagccattataaactcacacacacaagtggaggtatcggggttcgaactccggtcatggcatccggtctaacaatttcggcattttgccagttgagctag 30553086  T
Q  277 aacttctggata 288  Q
     |||||||||||    
T  30553087 gacttctggata 30553098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 32591088 - 32590969
Alignment:
Q  171 aatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 269  Q
    ||||| |||||||||||||||| ||||||| |  || |||||||  | |||||||| || ||||||||| ||  |||||||||| || |||||  |||||    
T  32591088 aatggcaaagccattataaactgacacacacaagtggaggtaccgggattcgaaccccgatcatggcatccggcctaacaatttcgacattttaccagtt 32590989  T
Q  270 gagttagaacttctggatat 289  Q
    ||| ||| ||||||||||||    
T  32590988 gagctaggacttctggatat 32590969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 43904519 - 43904622
Alignment:
Q  183 attataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaact 280  Q
    ||||||||||||||||||||  || ||||||||  ||| ||||| |||||||||||| ||  |||||||||| || | |||| ||||||||| |||||||    
T  43904519 attataaactcacacacataaatggaggtaccagggtttgaaccccggtcatggcatccggcctaacaatttcgacatttttttcagttgagctagaact 43904618  T
Q  281 tctg 284  Q
    ||||    
T  43904619 tctg 43904622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 276
Target Start/End: Original strand, 46800044 - 46800150
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 269  Q
    |||||| |||||||||||||| ||||||||| |  || |||||||  |||| |||| | |||||| ||| |||||||||||||| |  |||||| || ||    
T  46800044 aaatggcaaagccattataaattcacacacacaagtggaggtaccgggttcaaaccccagtcatgacatccgatctaacaatttcggcattttgccaatt 46800143  T
Q  270 gagttag 276  Q
    |||||||    
T  46800144 gagttag 46800150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 3440844 - 3440759
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  3440844 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 3440759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 28266645 - 28266524
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||||||||||||| |||||||||| |  || ||| |||   ||||||||| |||||||||||| |   |||||||||| |  |||||||||    
T  28266645 gaaatggcaaagccattataaaactcacacacacaagtggaggcaccggagttcgaaccccggtcatggcatccagcctaacaatttcggcattttgtca 28266546  T
Q  267 gttgagttagaacttctggata 288  Q
    |||||| ||| |||||||||||    
T  28266545 gttgagctaggacttctggata 28266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 40559784 - 40559671
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || ||||| |   ||||||||| || ||| ||||| ||| |||||||||| |  ||||| ||||||||| ||    
T  40559784 aaagccattataaactcacacacacaagtggaggtatcggagttcgaaccccgatcaaggcatccgacctaacaatttcggcattttatcagttgagcta 40559685  T
Q  276 gaacttctggatat 289  Q
    | ||||||||||||    
T  40559684 ggacttctggatat 40559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 42296829 - 42296709
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||| || |||||| |  || |||||||   ||||||||| |||||||| ||| ||  ||||||||||||  |||||| |||    
T  42296829 gaaatggcaaagccattataaattctcacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattttg-cag 42296731  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  42296730 ttgagctaggacttctggatat 42296709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 8508050 - 8507930
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||| ||||| | |||||||||| ||  |||||||||| |  |||||  |||    
T  8508050 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggtttgaaccccagtcatggcatccggcctaacaatttcggcatttttccag 8507951  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||  |||||||||||    
T  8507950 ttgagctaagacttctggata 8507930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 11029782 - 11029662
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 266  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||||||  ||||||||||| |   |||||||||| || | ||||| ||    
T  11029782 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccctggtcatggcatccagcctaacaatttcgacatttttgcca 11029683  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||| ||| ||||||||||    
T  11029682 gttgagctaggacttctggat 11029662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 287
Target Start/End: Complemental strand, 24751872 - 24751752
Alignment:
Q  168 tgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    |||||||  |||||||||||||| ||||||||| |  |||||||||||  ||||||||| || ||||| ||| ||  |||||||||| |  |||||| ||    
T  24751872 tgaaatgacaaagccattataaattcacacacacaagtgaaggtaccagggttcgaaccccgatcatgacatccggcctaacaatttcggcattttgcca 24751773  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||| ||| |||| |||||    
T  24751772 gttgagctaggacttgtggat 24751752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 43426686 - 43426582
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||| |||||||  || |||||||   ||||||||  ||||||||||||  || |||||||||| |  ||||| ||||    
T  43426686 gaaatggcaaagccattataaactcatacacataagtggaggtaccggggttcgaactccggtcatggcatctgacctaacaatttcggcattttttcag 43426587  T
Q  268 ttgag 272  Q
    |||||    
T  43426586 ttgag 43426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 44107490 - 44107379
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||| |||||||||||||||||| |  || ||||||| | |||||| || |||||||||||| ||  ||||||||||  | |||||| |||||||| ||    
T  44107490 aaagctattataaactcacacacacaagtggaggtaccgaggttcgaccc-cggtcatggcatccggcctaacaatttcaacattttgccagttgagcta 44107392  T
Q  276 gaacttctggata 288  Q
    |||||| ||||||    
T  44107391 gaacttgtggata 44107379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 1242335 - 1242220
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||| ||||| |  |||||| |||    
T  1242335 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaataatttcggcattttgccag 1242236  T
Q  268 ttgagttagaacttct 283  Q
    ||||| ||| ||||||    
T  1242235 ttgagctaggacttct 1242220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 17501045 - 17500926
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgtt-cgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || | |||    ||| |||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  17501045 gaaatggcaaagccattataaactcacacacacaagtggatgtatttggtttcgaaccccggtcatggcatccggcctaacaatttcggcatttttccag 17500946  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||| ||||||||||    
T  17500945 ttgagttaggacttctggat 17500926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 22371567 - 22371449
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||| ||||||| |  || ||| ||  || |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  22371567 gaaatggcaaagccattataaacttacacacacaaatggagg-actgtggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 22371469  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  22371468 ttgaggtaggacttctggat 22371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 32597355 - 32597386
Alignment:
Q  169 gaaatggtaaagccattataaactcacacaca 200  Q
    ||||||||||||||||||||||||||||||||    
T  32597355 gaaatggtaaagccattataaactcacacaca 32597386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 43897973 - 43898092
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| |||| |||||||||||||| |  || |||||||  | |||||| | |||||||||||| ||  |||||||||| |  |||||||| |    
T  43897973 gaaatggcaaagtcattgtaaactcacacacacaagtggaggtaccggggttcgaatcccggtcatggcatccggcctaacaatttcggcattttgtctg 43898072  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  43898073 ttgagctaggacttctggat 43898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 49285558 - 49285507
Alignment:
Q  236 cattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 287  Q
    ||||||| |||||||||| || ||||||||||| ||||||| ||||||||||    
T  49285558 cattcgacctaacaatttcgacattttgtcagtggagttaggacttctggat 49285507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 53669713 - 53669752
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacaca 200  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  53669713 agatagatgaaatggcaaagccattataaactcacacaca 53669752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 2558865 - 2558832
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||||| ||||||||||||||||||||||||||    
T  2558865 gaaatggcaaagccattataaactcacacacata 2558832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 8128300 - 8128385
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  ||||||||||    
T  8128300 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaattt 8128385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 9318622 - 9318533
Alignment:
Q  182 cattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttga 271  Q
    ||||||||||||||||||| | ||||||||| ||  ||||||| ||||| ||| ||| |   |||||||||| || |||||| |||||||    
T  9318622 cattataaactcacacacacatctgaaggtatcagattcgaacatcggttatgacatccagcctaacaatttcgacattttgccagttga 9318533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 30740970 - 30740933
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc 214  Q
    ||||||||||||||||||||||||||| || |||||||    
T  30740970 aaagccattataaactcacacacatacgtggaggtacc 30740933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 33886380 - 33886465
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||| ||||||||||    
T  33886380 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaattt 33886465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 34481802 - 34481887
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  |  ||||||| | ||||||||| |||||||| ||| ||  ||||||||||    
T  34481802 gaaatggcaaagccattataaactcacacacacaagtagaggtaccgaagttcgaaccccggtcatgtcatccggcctaacaattt 34481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 41921623 - 41921586
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacaca 198  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  41921623 agatagatgaaatggcaaagccattataaactcacaca 41921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 47069125 - 47069040
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  47069125 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 47069040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 48209449 - 48209526
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||| |||||||| ||||||||||||| ||||||||||   ||||||||  ||| |||||||||||  ||||||||||    
T  48209449 aaagtcattataagctcacacacatacgtgaaggtaccggggttcgaactccggccatggcattcggcctaacaattt 48209526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 37124335 - 37124215
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||| ||||||||| |||||||||| |   | ||||||| | ||||||||| |||||||||||||||  |||||||||| |  |||||| ||    
T  37124335 gaaatggcaaagtcattataaaactcacacacacaaggggaggtaccgaggttcgaaccccggtcatggcattcggcctaacaatttcggcattttgcca 37124236  T
Q  267 gttgagttagaacttctggat 287  Q
    || ||| ||  ||||||||||    
T  37124235 gtagagctatgacttctggat 37124215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 43605585 - 43605705
Alignment:
Q  169 gaaatggtaaagccattat-aaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| ||||||||||| ||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||| ||    |||||| ||    
T  43605585 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaaattcagcattttgcca 43605684  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||| ||| ||||||||||    
T  43605685 gttgagctaggacttctggat 43605705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 50238850 - 50238966
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||  || ||||||||| ||  |||||||||| || |||||  |||    
T  50238850 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggagttcgaactccgatcatggcatccggcctaacaatttcgacattttaccag 50238949  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  50238950 ttgagctaggacttctg 50238966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 52256762 - 52256878
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 266  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| |   |||||||| | || | ||||| ||    
T  52256762 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccagcctaacaatatcgacatttttgcca 52256861  T
Q  267 gttgagttagaacttct 283  Q
    |||||| ||||||||||    
T  52256862 gttgagctagaacttct 52256878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 21530898 - 21530779
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| ||| |||||||||| |  ||||||  ||    
T  21530898 gaaatggtaaaaccattataaactcacacacataagtgaaggtaccgggattcgaacctcggtcatggcatccgacctaacaatttcggtattttgctag 21530799  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| |||||| |||||||    
T  21530798 ttgagctagaacatctggat 21530779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 25250902 - 25250783
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  ||||||||||||  |||||| ||||    
T  25250902 aaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattttggcattttgccagt 25250803  T
Q  269 tgagttagaacttctggata 288  Q
    |||| ||| |||||||||||    
T  25250802 tgagctaggacttctggata 25250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 24655092 - 24654973
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||  | |||||||| | |||||||||| ||  ||||||||||||  |||||| |||    
T  24655092 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccagtcatggcatccggcctaacaattttggcattttgccag 24654993  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  24654992 ttgagctaggacttctggat 24654973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 27928276 - 27928157
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| || ||||||||||| |  |||||| |||    
T  27928276 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggtctaacaatttcggcattttgccag 27928177  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  27928176 ttgagctaggacttctggat 27928157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 34711565 - 34711684
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||| |||||||||| |  |||||| |||    
T  34711565 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccag 34711664  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  34711665 ttgagctaggacttctggat 34711684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 272
Target Start/End: Complemental strand, 10006270 - 10006160
Alignment:
Q  163 ataggtgaaatggtaaagccattataaactcacacacatacctgaaggtac-catgttcgaacctcggtcatggcattcgatctaacaattttgaaattt 261  Q
    |||| ||||||||||||| |||||||||||||||||||||  |||||||||    ||||||||| || ||||| ||| || |||||||||||||| ||||    
T  10006270 atagatgaaatggtaaagtcattataaactcacacacataagtgaaggtactggggttcgaaccccgatcatgacatccggtctaacaattttgacattt 10006171  T
Q  262 tgtcagttgag 272  Q
    || ||||||||    
T  10006170 tgccagttgag 10006160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 23681128 - 23681012
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||| |||||||  |||||| |||    
T  23681128 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaataattttggcattttgccag 23681029  T
Q  268 ttgagttagaacttctg 284  Q
    ||||||||| |||||||    
T  23681028 ttgagttaggacttctg 23681012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 26690812 - 26690696
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  26690812 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 26690713  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  26690712 ttgagctaggacttctg 26690696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 4312251 - 4312132
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| | |||||||||| ||| |||||||||| |  |||||| |||    
T  4312251 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccagtcatggcatccgacctaacaatttcggcattttgccag 4312152  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  4312151 ttgagctaggacttctggat 4312132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 10096730 - 10096615
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || ||||| |  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  10096730 gaaatggcaaagccattataaactcacacacataagtggaggtatcggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 10096631  T
Q  268 ttgagttagaacttct 283  Q
    ||||| ||| ||||||    
T  10096630 ttgagctaggacttct 10096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 11098076 - 11098203
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  ||||| |||||||||||||||| |||  ||  || |||  | |||||||| | |||||| ||||||| |||||||||| || ||    
T  11098076 agatagatgaaatgacaaagcaattataaactcacacatataagtggtggaaccggggttcgaaccccagtcatgacattcgacctaacaatttcgatat 11098175  T
Q  260 tttgtcagttgagttagaacttctggat 287  Q
    ||||||||||||||||| ||||||||||    
T  11098176 tttgtcagttgagttaggacttctggat 11098203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 38070491 - 38070614
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||| | ||||||| | |||||||| ||| ||  |||||||||| |  |||||| |||    
T  38070491 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgtggttcgaatcccggtcatgtcatccggcctaacaatttcggcattttgccag 38070590  T
Q  268 ttgagttagaacttctggatatca 291  Q
    ||||| ||| ||||||||||||||    
T  38070591 ttgagctaggacttctggatatca 38070614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 14188208 - 14188086
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||  | ||||||||  ||||||||||| ||  |||||||||| || |||||| |||    
T  14188208 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaacccaggtcatggcatccggcctaacaatttcgacattttgccag 14188109  T
Q  268 ttgagttagaacttctggatatc 290  Q
    ||||| ||| |||||||||||||    
T  14188108 ttgagctaggacttctggatatc 14188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 27544926 - 27545046
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||| || |  || |||||||   ||||||||| ||| |||  ||| ||| |||||||||| || |||||| |||    
T  27544926 gaaatggcaaagccattataaactcacacgcacaagtggaggtaccggggttcgaaccccggacataacatccgacctaacaatttcgacattttgccag 27545025  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| |||||||||||||||    
T  27545026 ttgagctagaacttctggata 27545046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 31639112 - 31639232
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| |||||||||| ||||||||||  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||||||  ||    
T  31639112 gaaatggcaaagtcattataaacccacacacataagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcggcattttgctag 31639211  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||||||| |||||||||||    
T  31639212 ttgagttaggacttctggata 31639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 34143364 - 34143484
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||| ||||||||||||||||||||  || ||||||| | || |||||| |||||||||||| ||  |||||||||| |  ||||||  |     
T  34143364 gaaatggcaaagctattataaactcacacacataagtggaggtaccgaggtccgaaccccggtcatggcatccggcctaacaatttcggcattttgctaa 34143463  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||||||| |||||||||||    
T  34143464 ttgagttaggacttctggata 34143484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 34744277 - 34744397
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| ||||||||||||||||||||||||||  || ||||||| | ||||||||| || ||||||||| ||  |||||||| | |  |||||| ||||    
T  34744277 aaatggcaaagccattataaactcacacacataagtggaggtaccgaggttcgaaccacgatcatggcatccgccctaacaatatcggcattttgccagt 34744376  T
Q  269 tgagttagaacttctggatat 289  Q
    |||| ||  ||||||||||||    
T  34744377 tgagctatgacttctggatat 34744397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 36586592 - 36586480
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||| | |  || |||||||  | |||||||| |||||||||||| ||| |||||||||| |  |||||| |||||||| ||    
T  36586592 aaagccattataaactcacacatacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccagttgagcta 36586493  T
Q  276 gaacttctggata 288  Q
    | |||||||||||    
T  36586492 ggacttctggata 36586480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 4430745 - 4430864
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  4430745 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 4430844  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  4430845 ttgagctaggacttctggat 4430864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 5704638 - 5704757
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||| |||| ||||||||||||  |  |||||||||| || ||||||||||    
T  5704638 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcaaaccccggtcatggcatctggcctaacaatttcgacattttgtcag 5704737  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| |||| |||||    
T  5704738 ttgagctaggacttgtggat 5704757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 6317418 - 6317299
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  6317418 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 6317319  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  6317318 ttgagctaggacttctggat 6317299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 19649516 - 19649627
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  19649516 aaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 19649615  T
Q  276 gaacttctggat 287  Q
      ||||||||||    
T  19649616 tgacttctggat 19649627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 40744252 - 40744371
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||| | | |||||||  ||||||||||||  |  ||||||||||||| |||||| |||    
T  40744252 gaaatggcaaaaccattataaactcacacacacaagtggaggtactagggttcgaactccggtcatggcatctggcctaacaattttgacattttgccag 40744351  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  40744352 ttgagctaggacttctggat 40744371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 44814989 - 44814866
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  ||    
T  44814989 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcat 44814890  T
Q  260 tttgtcagttgagttagaacttct 283  Q
    |||| |||||||| ||| ||||||    
T  44814889 tttgccagttgagctaggacttct 44814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 18040254 - 18040133
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||||||||||||||||||||||||||||| |  || |||||||   ||||||| || ||||||| ||| ||  ||||||||||    ||||| ||||    
T  18040254 gaaatggtaaagccattataaactcacacacacaagtggaggtaccggggttcgaatctgggtcatgacatccggcctaacaatttcagcattttatcag 18040155  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  18040154 ttgagctaggacttctggatat 18040133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 288
Target Start/End: Original strand, 2508136 - 2508264
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  ||||| |||||||||||||||||| |  |  ||||| |   ||||||||| |||||||| ||| ||  ||||||||||||  ||    
T  2508136 agatagatgaaatgacaaagctattataaactcacacacacaagtagaggtatcggagttcgaaccccggtcatgacatccgtcctaacaattttggcat 2508235  T
Q  260 tttgtcagttgagttagaacttctggata 288  Q
    ||||| ||||||||||| |||||||||||    
T  2508236 tttgttagttgagttaggacttctggata 2508264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 4977044 - 4977164
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||  | ||  |||||||||| |  |||||| |||    
T  4977044 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggggtccggcctaacaatttcggcattttgccag 4977143  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  4977144 ttgagctaggacttctggata 4977164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 14243817 - 14243701
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||||||||||||||| |||||   |||||||||| |  |||||  |||    
T  14243817 gaaatggcaaagccattataaactcacacacacaaatggaggtaccggggttcgaacctcggtcatgacattcagcctaacaatttcggcattttaccag 14243718  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  14243717 ttgagctaggacttctg 14243701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 15129744 - 15129635
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 276  Q
    ||||| ||||||||||||||||||    || |||||| | |||||||||||| |||||||||  || ||||||||||||  |||||| | |||||| |||    
T  15129744 aaagctattataaactcacacacaag--tggaggtacgaggttcgaacctcgatcatggcatcagacctaacaattttggcattttgccggttgagctag 15129647  T
Q  277 aacttctggata 288  Q
     |||||||||||    
T  15129646 gacttctggata 15129635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 27849753 - 27849872
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 266  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||| |||| ||  ||||||||||  | | ||||||||    
T  27849753 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcat-gcatccggcctaacaatttcggcatttttgtca 27849851  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||||||| ||||||||||    
T  27849852 gttgagttaggacttctggat 27849872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 37295236 - 37295128
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  37295236 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 37295137  T
Q  276 gaacttctg 284  Q
    | |||||||    
T  37295136 ggacttctg 37295128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 37817486 - 37817374
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || ||||| |  | |||||||| |||||||||||| ||| |||||||||| |  |||||| |||||||| ||    
T  37817486 aaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccggtcatggcatccgacctaacaatttcgtcattttgccagttgagcta 37817387  T
Q  276 gaacttctggata 288  Q
    | |||| ||||||    
T  37817386 ggacttatggata 37817374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 38953490 - 38953610
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  38953490 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 38953589  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||  |||||||||||    
T  38953590 ttgagctaagacttctggata 38953610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 26738089 - 26737970
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||||||||||||||||||| ||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||  |||    
T  26738089 gaaatggtaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttaccag 26737990  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  26737989 ttgagctaggacttctggat 26737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 35421629 - 35421747
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||| ||| |  || ||||||   | |||||||| |||||||||||||||  |||||||||| || |||||| |||    
T  35421629 gaaatggcaaagccattataaactcaca-acacaagtggaggtactggggttcgaaccccggtcatggcattcggcctaacaatttcgacattttgccag 35421727  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||  ||| ||||||||||    
T  35421728 ttgaactaggacttctggat 35421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 7882974 - 7882928
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca 215  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||    
T  7882974 gaaatggcaaagccattataaactcacacacataagtgaaggtacca 7882928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 11908229 - 11908283
Alignment:
Q  232 atggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctgga 286  Q
    ||||| ||||| |||||| |||||| |||||| ||||||||||||||||||||||    
T  11908229 atggcgttcgacctaacagttttgatattttgacagttgagttagaacttctgga 11908283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 36055587 - 36055517
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcat 238  Q
    ||||||||||||| ||||||||||||||||||||  || |||||||   ||||||||| ||||||||||||    
T  36055587 gaaatggtaaagctattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcat 36055517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 25063458 - 25063373
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  25063458 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 25199164 - 25199043
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||| | ||||||| |||| ||  |||||||||| |  |||||  |||    
T  25199164 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaacccggtcatagcatccggcctaacaatttcggcattttaccag 25199065  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  25199064 ttgagctaggacttctggatat 25199043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 27817459 - 27817544
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| || |||||||||||    
T  27817459 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggtctaacaattt 27817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 293
Target Start/End: Original strand, 39666905 - 39667030
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||| ||||| |  || ||||| |  | || ||||| | |||||||||| ||  |||||||||| |  ||||||||||    
T  39666905 gaaatggcaaagccattataaactcatacacacaagtggaggtatcggggtttgaaccacagtcatggcatccggcctaacaatttcggcattttgtcag 39667004  T
Q  268 ttgagttagaacttctggatatcatt 293  Q
    ||||||||| ||||||| || |||||    
T  39667005 ttgagttaggacttctgaatttcatt 39667030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 40772575 - 40772660
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||   ||||||||| || ||||||||| ||  ||||||||||    
T  40772575 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccgatcatggcatccggcctaacaattt 40772660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 42158677 - 42158592
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||| ||| || |||||||||||||||||||||  || ||||||| | |||||||||| |||||||| ||||| | |||||||||    
T  42158677 gaaattgtatagtcattataaactcacacacataagtggaggtaccgaggttcgaaccttggtcatggtattcggtttaacaattt 42158592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 14258411 - 14258314
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagtta 275  Q
    |||| |||||||||||||  ||||||  || ||||||| |||||||||| ||||||| |||| ||| ||||||||||  | | |||||||||||||||||    
T  14258411 aaagtcattataaactca--cacataagtggaggtaccgtgttcgaaccccggtcatagcatccgacctaacaatttcaacatttttgtcagttgagtta 14258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 40344607 - 40344488
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| |||||||||||||||||||||  || ||||||||  ||||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  40344607 gaaatggcaaagtcattataaactcacacacataagtggaggtaccagggttcgaaccccgttcatgacatccg-gctaacaatttcggcattttgacag 40344509  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||  ||| |||||||||||    
T  40344508 ttgaactaggacttctggata 40344488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 2733733 - 2733615
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||| |||||||||||||||||| |  ||  ||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  2733733 gaaatggcaaagctattataaactcacacacacaagtgg-ggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 2733635  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  2733634 ttgagctaggacttctggat 2733615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 17919833 - 17919908
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaat 251  Q
    |||||||||||||||||||||||| |  || ||||||| | ||||||||| |||||||||||| ||  ||||||||    
T  17919833 aaagccattataaactcacacacacaagtggaggtaccgaggttcgaaccccggtcatggcatccggcctaacaat 17919908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Complemental strand, 36442424 - 36442393
Alignment:
Q  169 gaaatggtaaagccattataaactcacacaca 200  Q
    ||||||||||||||||||||||||||||||||    
T  36442424 gaaatggtaaagccattataaactcacacaca 36442393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 42650286 - 42650167
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||| ||||| ||||||||||||| |||||||  || ||||||| | ||||||||| |  ||||||||| ||| |||||||||| |  |||||  | |    
T  42650286 gaaatgataaagtcattataaactcatacacataagtggaggtaccgaggttcgaaccccaatcatggcatccgacctaacaatttcggcattttaccgg 42650187  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||| |||| |||||    
T  42650186 ttgagttaggacttgtggat 42650167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 10286544 - 10286594
Alignment:
Q  237 attcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 287  Q
    ||||| |||||||||||||| |||||| |||||||| ||| ||||||||||    
T  10286544 attcggtctaacaattttgacattttgccagttgagctaggacttctggat 10286594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 22762073 - 22762003
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 287  Q
    |||||||| ||| ||||| ||| ||| |||||||||| |  ||||||||||||||  ||||||||||||||    
T  22762073 gttcgaacttcgatcatgacatccgacctaacaatttcggcattttgtcagttgaactagaacttctggat 22762003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 43820937 - 43820867
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 287  Q
    ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||||||||||| ||||||||||    
T  43820937 gttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccagttgagttaggacttctggat 43820867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 403735 - 403666
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctgga 286  Q
    ||||||||| |||||||||||| ||| |||||||||| |  ||||| ||||||||| ||| |||| ||||    
T  403735 gttcgaaccccggtcatggcatccgacctaacaatttcggcattttatcagttgagctaggacttgtgga 403666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 7772060 - 7772181
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||  |||    
T  7772060 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcattttaccag 7772159  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  7772160 ttgagctaggacttctggatat 7772181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 31941036 - 31941077
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacata 202  Q
    |||||| || ||||| ||||||||||||||||||||||||||    
T  31941036 agatagatggaatggcaaagccattataaactcacacacata 31941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 34642455 - 34642532
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||| ||||||||||||||||||| |  |  ||||||| ||||||||||| |||||||| ||| ||| ||||||||||    
T  34642455 aaagtcattataaactcacacacacaaattgaggtaccgatgttcgaaccccggtcatgacatccgacctaacaattt 34642532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 41746707 - 41746776
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctgga 286  Q
    ||||||||| || ||||||||| ||  |||| |||||||  ||||||||||||||| ||| |||||||||    
T  41746707 gttcgaaccccgatcatggcatccggcctaataattttggcattttgtcagttgagctaggacttctgga 41746776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 1258781 - 1258709
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    |||||||||  ||||||||||| | ||||||| ||||| | ||||||||||||||| |  |||||||| ||||    
T  1258781 gttcgaaccctggtcatggcatccaatctaactattttaacattttgtcagttgagctgaaacttctgaatat 1258709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 3054081 - 3054021
Alignment:
Q  229 gtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    |||||||||| ||  |||||||||| |  |||||| |||||||| ||||||||||||||||    
T  3054081 gtcatggcatccggcctaacaatttcggcattttgccagttgagctagaacttctggatat 3054021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 25893969 - 25893853
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||| ||||||| |  || |||||||   ||||||||| || ||||||||| ||  ||||||||||    |||||| |||    
T  25893969 gaaatggcaaagccattataaacttacacacacaaatggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcagcattttgccag 25893870  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  25893869 ttgagctaggacttctg 25893853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 26675675 - 26675559
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  |||| |||| ||||||||  || ||  |||||||||| |  |||||  |||    
T  26675675 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcaaaccccggtcatgatatccggcctaacaatttcggcattttaccag 26675576  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  26675575 ttgagctaggacttctg 26675559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 34540074 - 34540190
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||| |||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  34540074 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcaaaccccgatcatggcatccggcctaacaatttcggcattttgccag 34540173  T
Q  268 ttgagttagaacttctg 284  Q
    ||||  ||| |||||||    
T  34540174 ttgaactaggacttctg 34540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 37708465 - 37708577
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||| ||||||| |  || |||||||   ||||||||| ||||||| |||| ||  |||||||||| |  |||||| |||||||| ||    
T  37708465 aaagccattataaacttacacacacaagtggaggtaccggggttcgaaccccggtcatagcatccgtcctaacaatttcggcattttgccagttgagcta 37708564  T
Q  276 gaacttctggata 288  Q
    | |||| ||||||    
T  37708565 ggacttatggata 37708577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 40812135 - 40812016
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||  | |||||||| |||||||| ||| ||| |||||||||| |  ||||||||||    
T  40812135 gaaatggcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgtcag 40812036  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  40812035 ttgaggtaggacttctggat 40812016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 727299 - 727419
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||| |||||||||| |  ||||||||||    
T  727299 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccgatcatggcatccgacctaacaatttcggcattttgtcag 727398  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  727399 ttgagctaggacttctggata 727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 35476500 - 35476620
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  35476500 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 35476599  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  35476600 ttgagctaggacttctggata 35476620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 44948137 - 44948017
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||| | |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| || ||||||||||    
T  44948137 gaaatggcaaagccattataaactcacacatacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcgacattttgtcag 44948038  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  44948037 ttgagctaggacttctggata 44948017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 36794922 - 36794803
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||| ||| | ||||||||| || ||||||||||||  ||||||||||||| |||||  |||    
T  36794922 gaaatggcaaagccattataaactcacacacacaagtggaggaaccgaggttcgaaccccgatcatggcattcggcctaacaattttgacattttaccag 36794823  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  36794822 ttgagctaggacttctggat 36794803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 13267985 - 13268105
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||| |||||||||| |  |||||| |||    
T  13267985 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgccag 13268084  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  13268085 ttgagctaggacttctggata 13268105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 37198733 - 37198846
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||| | ||||||||||||||||||||||||||  ||||||||||   ||||||||| || ||||| |||  |  |||||||||| || ||    
T  37198733 agatagatgaaattgcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccgatcatgccatctggcctaacaatttcgacat 37198832  T
Q  260 tttgtcagttgagt 273  Q
    ||||||||||||||    
T  37198833 tttgtcagttgagt 37198846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 23957162 - 23957050
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||| |||||||||||||||  || |||||||  | |||||||| || ||||| ||| ||  |||||||||| || |||||| |||||||| ||    
T  23957162 aaagccattaaaaactcacacacataagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgacattttgccagttgagcta 23957063  T
Q  276 gaacttctggata 288  Q
    |||||||||||||    
T  23957062 gaacttctggata 23957050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 45049503 - 45049383
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||  |||||||||| || |||||| |||    
T  45049503 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcgaaccccggtcatgacatccggcctaacaatttcgacattttgccag 45049404  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||  |||||||||||    
T  45049403 ttgagctaagacttctggata 45049383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 20251495 - 20251614
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  20251495 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 20251594  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  20251595 ttgagctaggacttctggat 20251614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 36754751 - 36754870
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||| |||| ||  |||||||||| |  |||||| |||    
T  36754751 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcggcattttgccag 36754850  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  36754851 ttgagctaggacttctggat 36754870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 286
Target Start/End: Complemental strand, 39070137 - 39070019
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  39070137 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 39070038  T
Q  268 ttgagttagaacttctgga 286  Q
    ||||| ||| |||||||||    
T  39070037 ttgagctaggacttctgga 39070019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 4014823 - 4014944
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||  || ||  |||||||||| |  ||||||||||    
T  4014823 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgagatccggcctaacaatttcggcattttgtcag 4014922  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| |||| |||||||    
T  4014923 ttgagctaggacttgtggatat 4014944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 42200872 - 42200993
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||  ||||||||||||||||||| |  || ||||||| | ||||||||| || ||||| ||| ||  ||||||||||||  |||||| |||    
T  42200872 gaaatggaaaaatcattataaactcacacacacaagtggaggtaccgaggttcgaaccccgatcatgacatccggcctaacaattttggcattttgccag 42200971  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  42200972 ttgagctaggacttctggatat 42200993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 34481681 - 34481797
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  ||| ||||||   ||||||||| |||||||||||| |   |||||||||| |  |||||| |||    
T  34481681 gaaatggcaaagccattataaactcacacacacaagtgagggtaccggggttcgaaccccggtcatggcatccagcctaacaatttcggcattttgccag 34481780  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  34481781 ttgagctaggacttctg 34481797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 3048660 - 3048541
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||| ||||||||||| |||||||||||||||  || |||||||   ||||||||| || ||||||||| ||  |||||||||| || ||||||  ||    
T  3048660 gaaatgataaagccattaaaaactcacacacataagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcgacattttgctag 3048561  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| |||| |||||    
T  3048560 ttgagctaggacttatggat 3048541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 12236239 - 12236120
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||| ||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  12236239 gaaatggcaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 12236140  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  12236139 ttgagctaggacttctggat 12236120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 15897332 - 15897213
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  15897332 gaaatggcaaaggcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 15897233  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  15897232 ttgagctaggacttctggat 15897213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 28855425 - 28855544
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| |||||||||||||| ||||||||| |  |||||| |||  | |||||||| | |||||||||| ||  ||||||||||||  |||||| ||||    
T  28855425 aaatggcaaagccattataaattcacacacacaagtgaaggaaccgggattcgaaccccagtcatggcatccgccctaacaattttggcattttgccagt 28855524  T
Q  269 tgagttagaacttctggata 288  Q
    |||| ||| ||||| |||||    
T  28855525 tgagctaggacttccggata 28855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 34667162 - 34667043
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| ||  |||||||||| |  |||||| |||    
T  34667162 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccggcctaacaatttcggcattttgccag 34667063  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  34667062 ttgagctaggacttctggat 34667043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 5887686 - 5887569
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||| ||||||||||||||||||||||| |||  || ||||||||  |||||||||  ||||||| ||| ||  |||||||   ||| |||||  |||    
T  5887686 gaaatgataaagccattataaactcacacatataagtggaggtaccagagttcgaaccctggtcatgacatccggcctaacaa---tgacattttaccag 5887590  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||||||| |||||||||||    
T  5887589 ttgagttaggacttctggata 5887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 40592381 - 40592311
Alignment:
Q  218 ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    |||||||| |||||||||||| ||| |||||||||| |  |||||| |||||||| ||| |||||||||||    
T  40592381 ttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccagttgagctaggacttctggata 40592311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 433180 - 433135
Alignment:
Q  244 ctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||    
T  433180 ctaacaatttcgacattttgtcagttgagttaggacttctggatat 433135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 7315763 - 7315804
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacata 202  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  7315763 agatagatgaaatggtaaagctattataaactcacacacata 7315804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 11061500 - 11061380
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||    | ||||| ||  | |||||||| |||||||| ||| ||  |||||||||| || ||||| ||||    
T  11061500 gaaatggcaaagccattataaactcacacacactagtaaaggtgccggggttcgaaccccggtcatg-catccggcctaacaatttcgacattttatcag 11061402  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||||||| ||||||| ||||    
T  11061401 ttgagttaggacttctgaatat 11061380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 12541354 - 12541431
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||||||||||||||||||||| |  |||||||||| | ||||||||| || ||||| ||| ||| ||||||||||    
T  12541354 aaagccattataaactcacacacacaagtgaaggtaccgaggttcgaaccccgatcatgacatccgacctaacaattt 12541431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 32023371 - 32023251
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||||||||||||| |||||||||| |  || ||| |||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||    
T  32023371 gaaatggcaaagccattataaaactcacacacacaagtggaggcaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcca 32023272  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||| ||| ||||||||||    
T  32023271 gttgagctaggacttctggat 32023251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 288
Target Start/End: Original strand, 41164650 - 41164778
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtac-catgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  ||||||||||||||||||||||||||  |  ||||||    ||||||||| ||||||||  || ||  |||||||||| || |     
T  41164650 agatagatgaaatgacaaagccattataaactcacacacataagtagaggtactggggttcgaaccccggtcatgatatccggcctaacaatttcgacac 41164749  T
Q  260 tttgtcagttgagttagaacttctggata 288  Q
    |||| |||||||| ||| |||||||||||    
T  41164750 tttgccagttgagctaggacttctggata 41164778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 43035558 - 43035438
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||||||||||||||||||||||||||||| |  |  |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||| ||     
T  43035558 gaaatggtaaagccattataaactcacacacacaagtagaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggtattttgccaa 43035459  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  43035458 ttgagctaggacttctggata 43035438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 43461352 - 43461460
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||||||| ||    
T  43461352 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccagttgagcta 43461451  T
Q  276 gaacttctg 284  Q
    | |||||||    
T  43461452 ggacttctg 43461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 18251443 - 18251377
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaatttt--gtcagttgagttagaactt 281  Q
    ||||||||| || |||||||||||| |||||||||||||  |||||  |||||||||||||| ||||    
T  18251443 gttcgaaccccgatcatggcattcggtctaacaattttggcatttttggtcagttgagttaggactt 18251377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 23080108 - 23080227
Alignment:
Q  170 aaatggtaaagccattat-aaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||| ||||||||||| ||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  23080108 aaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 23080207  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  23080208 ttgagctaggacttctggat 23080227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 30854759 - 30854866
Alignment:
Q  183 attataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaact 280  Q
    |||||||||||||||||| |  ||||||||||   |||||| || |||||||| ||||||  |||||||||| || | |||| ||||||||||||| |||    
T  30854759 attataaactcacacacacaagtgaaggtaccggggttcgagccccggtcatgacattcgtcctaacaatttcgacatttttatcagttgagttaggact 30854858  T
Q  281 tctggata 288  Q
    | ||||||    
T  30854859 tgtggata 30854866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 42007274 - 42007345
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    ||||||||| |||||||||||| ||  |||||||||| || |||||  |||||||| ||| |||||||||||    
T  42007274 gttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccagttgagctaggacttctggata 42007345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 6591001 - 6590968
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||||||||| ||||||||||||||||||||||    
T  6591001 gaaatggtaaaaccattataaactcacacacata 6590968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 11543809 - 11543894
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||| |||| || ||||||||| ||| ||||||||||    
T  11543809 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcaaaccccgatcatggcatccgacctaacaattt 11543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 19593641 - 19593608
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||||| ||||||||||||||||||||||||||    
T  19593641 gaaatggcaaagccattataaactcacacacata 19593608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 36755066 - 36754997
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggca 237  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||    
T  36755066 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggca 36754997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 38490409 - 38490530
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||| ||||||||| |||||||||| |  || |||||||  | |||||||| | |||||||||| ||  |||||||||| |  |||||| ||    
T  38490409 gaaatggcaaagtcattataaaactcacacacacaagtggaggtaccggggttcgaaccccagtcatggcatccggcctaacaatttcggcattttgcca 38490508  T
Q  267 gttgagttagaacttctggata 288  Q
    |||||| ||| |||||||||||    
T  38490509 gttgagctaggacttctggata 38490530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 12847041 - 12847085
Alignment:
Q  244 ctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||    
T  12847041 ctaacaattttggtattttaccagttgagttagaacttctggata 12847085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 18999383 - 18999327
Alignment:
Q  232 atggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    ||||||| ||| |||||||||| |  |||||| |||||||||||| |||||||||||    
T  18999383 atggcatccgacctaacaatttcggcattttgccagttgagttaggacttctggata 18999327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 38082918 - 38082950
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacat 201  Q
    |||||||||||| ||||||||||||||||||||    
T  38082918 gaaatggtaaagtcattataaactcacacacat 38082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 29510662 - 29510781
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||||||| ||||||||||||||||||| |  || | |||||| | |||||||| |||||||| ||| ||||||||||||||||  |||||| ||||    
T  29510662 aaatggtaaagtcattataaactcacacacacaagtggaagtaccaaggttcgaaccccggtcatgacatccgatctaacaattttggcattttgacagt 29510761  T
Q  269 tgagttagaacttctggata 288  Q
    |||||||| |||||||||||    
T  29510762 tgagttaggacttctggata 29510781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 25820960 - 25821079
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| || ||||| ||||    
T  25820960 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcgacattttatcag 25821059  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  25821060 ttgagctaggacttctggat 25821079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 43676034 - 43676153
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  43676034 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 43676133  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  43676134 ttgagctaggacttctggat 43676153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 40958584 - 40958706
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  40958584 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 40958683  T
Q  268 ttgagttagaacttctggatatc 290  Q
    ||||| ||| |||||||||||||    
T  40958684 ttgagctaggacttctggatatc 40958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 19338188 - 19338309
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  19338188 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 19338287  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  19338288 ttgagctaggacttctggatat 19338309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 48392074 - 48391953
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   |||||||||  ||||||||||| ||  |||||||||| |  |||||| |||    
T  48392074 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccctggtcatggcatccggcctaacaatttcggcattttgccag 48391975  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  48391974 ttgagctaggacttctggatat 48391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 50248147 - 50248027
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||| |  | ||||||||||||||||| ||| ||  |||||||||| || ||||| ||||    
T  50248147 gaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaacctcggtcatgacatccggcctaacaatttcgacattttatcag 50248048  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  50248047 ttgagctaggacttctggata 50248027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 29005206 - 29005088
Alignment:
Q  171 aatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 269  Q
    ||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||    
T  29005206 aatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagtt 29005107  T
Q  270 gagttagaacttctggata 288  Q
    ||| ||| |||||||||||    
T  29005106 gagctaggacttctggata 29005088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 39787663 - 39787780
Alignment:
Q  172 atggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttg 270  Q
    |||| |||| ||||||||||||||||| |||  || |||||||   ||||||||| ||||||||||||||| ||||||||||| || |||||  ||||||    
T  39787663 atggcaaagtcattataaactcacacatataagtggaggtaccggagttcgaaccccggtcatggcattcggtctaacaatttcgacattttaccagttg 39787762  T
Q  271 agttagaacttctggata 288  Q
    || ||| |||| ||||||    
T  39787763 agctaggacttgtggata 39787780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 40685647 - 40685527
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||| |||||| |  || ||||| |   ||||||||| |||||||| ||| ||| |||||||||| || |||||| |||    
T  40685647 gaaatggcaaagccattataaactctcacacacaaatggaggtatcggagttcgaaccccggtcatgacatccgacctaacaatttcgacattttgccag 40685548  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  40685547 ttgagctaggacttctggata 40685527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 12282732 - 12282613
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||| |||||||||||||||| |||||||||  || |||||||  ||||||||| |||||||||||| |   |||||||||| || | ||| |||||    
T  12282732 gaaatggcaaagccattataaacttacacacataagtggaggtaccgagttcgaaccccggtcatggcatccagcctaacaatttcgacactttatcagt 12282633  T
Q  269 tgagttagaacttctggata 288  Q
    |||  ||| |||||| ||||    
T  12282632 tgaactaggacttctagata 12282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 10635608 - 10635486
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||||||||||||| |||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||    
T  10635608 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcca 10635509  T
Q  267 gttgagttagaacttctggatat 289  Q
    |||||| ||| ||||||||||||    
T  10635508 gttgagctaggacttctggatat 10635486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 11797428 - 11797522
Alignment:
Q  188 aaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 281  Q
    |||||||||||||||  || |||||||| |||||||| | |||||||| ||||||  |||||||||| || |||||| |||||||||||| ||||    
T  11797428 aaactcacacacataagtggaggtaccaatgttcgaatcccggtcatgacattcggcctaacaatttcgacattttgccagttgagttaggactt 11797522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 32533931 - 32533825
Alignment:
Q  183 attataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 281  Q
    ||||||||||||||||||||  || ||||||||  ||||||||  || | ||||||||||  ||||||||||||  |||||| |||||||  ||||||||    
T  32533931 attataaactcacacacataagtggaggtaccagagttcgaactccgattatggcattcggcctaacaattttggcattttgccagttgaactagaactt 32533832  T
Q  282 ctggata 288  Q
    |||||||    
T  32533831 ctggata 32533825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 35758393 - 35758323
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcat 238  Q
    ||||||||||||||||||||||||||||||||||  || |||||||   ||||||||| ||||||||||||    
T  35758393 gaaatggtaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcat 35758323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 40503706 - 40503596
Alignment:
Q  178 aagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 276  Q
    ||||||||||| |||||||||||||  || || ||||| | ||||||||| | ||||| ||| ||  ||||||||||  | ||||||||||||||| |||    
T  40503706 aagccattatatactcacacacataagtggagttaccaggattcgaaccttgatcatgacatccggcctaacaatttcaacattttgtcagttgagctag 40503607  T
Q  277 aacttctggat 287  Q
    |||||||||||    
T  40503606 aacttctggat 40503596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 48314284 - 48314166
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||||||||||||||||| ||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| ||||    
T  48314284 aaatggtaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccagt 48314185  T
Q  269 tgagttagaacttctggat 287  Q
    |||| ||| ||||||||||    
T  48314184 tgagctaggacttctggat 48314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 15104162 - 15104041
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  |  ||||| |   ||||||||| || ||||| ||| ||  ||||||||||||  ||||||||||    
T  15104162 gaaatggcaaagccattataaactcacacacataagtagaggtatcggggttcgaaccccgatcatgacatccggcctaacaattttggcattttgtcag 15104063  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| |||||| |||||    
T  15104062 ttgagctaggacttctagatat 15104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 15906177 - 15906298
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||||||||||||||||||||||||||||||  || |||||||   |||||||||  | |||||||||  |  |||||||||| |  ||||||  ||    
T  15906177 gaaatggtaaagccattataaactcacacacataagtggaggtaccggggttcgaaccctgatcatggcatctggcctaacaatttcggcattttgctag 15906276  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  15906277 ttgagctaggacttctggatat 15906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 20164083 - 20164187
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  20164083 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 20164182  T
Q  268 ttgag 272  Q
    |||||    
T  20164183 ttgag 20164187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 24119774 - 24119658
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||| ||||||||||||||||||||  || || |||||  ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  24119774 gaaatggcaaagctattataaactcacacacataagtggagataccagggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 24119675  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  24119674 ttgagctaggacttctg 24119658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 288
Target Start/End: Complemental strand, 34010220 - 34010092
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| ||| |||||||||||||||||||| |  || |||||||   |||| |||| || ||||||||| ||  |||||||||| || ||    
T  34010220 agatagatgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcaaaccccgatcatggcatccggcctaacaatttcgacat 34010121  T
Q  260 tttgtcagttgagttagaacttctggata 288  Q
    |||| |||||||| ||  |||||||||||    
T  34010120 tttgccagttgagctaagacttctggata 34010092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 1576480 - 1576385
Alignment:
Q  181 ccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||||||||||||||||||||  || ||||| |   ||||||||| |||||||||||| ||||| ||||||||||  |||||  |||||||||||    
T  1576480 ccattataaactcacacacataagtggaggtaacggagttcgaaccccggtcatggcatccgatcaaacaattttggcatttttccagttgagtta 1576385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 27078666 - 27078548
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||| |||| |||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| || |||||| |||    
T  27078666 gaaatggcaaaaccatcataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcgacattttg-cag 27078568  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||||| ||||||||    
T  27078567 ttgagctagaatttctggat 27078548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 36586377 - 36586250
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||| ||||| ||  |||||||||| || ||    
T  36586377 agatagatgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcacggcatccggcctaacaatttcgacat 36586278  T
Q  260 tttgtcagttgagttagaacttctggat 287  Q
    |||  |||||||||||| |||| |||||    
T  36586277 tttaccagttgagttaggacttgtggat 36586250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 23225300 - 23225394
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 262  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||  | |||||||| | |||||||||| ||| ||||||||||||| |||||    
T  23225300 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaacccctgtcatggcatccgacctaacaattttgacatttt 23225394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 33845614 - 33845724
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| || ||||||||||| |  |||||| |||    
T  33845614 gaaatggcaaagccattataaactcacacacacaattggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcggcattttgccag 33845713  T
Q  268 ttgagttagaa 278  Q
    ||||| |||||    
T  33845714 ttgagctagaa 33845724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 33948364 - 33948254
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| || ||||||||||| |  |||||| |||    
T  33948364 gaaatggcaaagccattataaactcacacacacaattggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcggcattttgccag 33948265  T
Q  268 ttgagttagaa 278  Q
    ||||| |||||    
T  33948264 ttgagctagaa 33948254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 43026009 - 43025883
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacc-----tgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 262  Q
    ||||||| |||||||||||||||||||||||| | |     || ||||||  | |||||||||  ||||||||||| ||  |||||||||| || |||||    
T  43026009 gaaatggcaaagccattataaactcacacacacaacacaagtggaggtactgaagttcgaacccaggtcatggcatccggcctaacaatttcgatatttt 43025910  T
Q  263 gtcagttgagttagaacttctggatat 289  Q
    |||||||||  ||| ||||||||||||    
T  43025909 gtcagttgaactaggacttctggatat 43025883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 21522435 - 21522350
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| ||||| |||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||| ||||||||||    
T  21522435 gaaatggaaaagcaattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaattt 21522350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 32880597 - 32880710
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || ||||| |  | |||||||| | |||||||||| ||  |||||||||| |  |||||| |||||||||||    
T  32880597 aaagccattataaactcacacacacaagtggaggtagcggggttcgaaccccagtcatggcatccggcctaacaatttcggcattttgccagttgagtta 32880696  T
Q  276 gaacttctggatat 289  Q
    | |||||| |||||    
T  32880697 ggacttctagatat 32880710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 33132738 - 33132859
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    ||||||| |||||| ||||| | ||||||||||||||| | |  || |||||   | |||||||| ||| |||||| || ||| ||||||||||||| ||    
T  33132738 agataggcgaaatgataaagtcgttataaactcacacataaaagtggaggtattgaggttcgaacttcgatcatggtatccgacctaacaattttgatat 33132837  T
Q  260 tttgtcagttgagttagaactt 281  Q
    |||| |||||||||||| ||||    
T  33132838 tttgccagttgagttaggactt 33132859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 4126693 - 4126573
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   |||||||||  | ||||||||| ||  ||||||||||    ||||||||||    
T  4126693 gaaatggcaaaggcattataaactcacacacacaagtggaggtaccggggttcgaaccctgatcatggcatccggcctaacaatttccgcattttgtcag 4126594  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  4126593 ttgagctaggacttctggata 4126573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 5598411 - 5598300
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| ||| |||||||||| |  |||||  |||||||| ||    
T  5598411 aaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccgacctaacaatttcggcatttttccagttgagcta 5598312  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  5598311 ggacttctggat 5598300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 43086489 - 43086600
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  43086489 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccagttgagcta 43086588  T
Q  276 gaacttctggat 287  Q
    | |||| |||||    
T  43086589 ggacttatggat 43086600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 49948351 - 49948240
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  || ||||||   | |||||| | |||||||||||| ||  |||||||||| || |||||| |||||||| ||    
T  49948351 aaagtcattataaactcacacacacaagtggaggtactggggttcgaatcccggtcatggcatccggcctaacaatttcgacattttgccagttgagcta 49948252  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  49948251 ggacttctggat 49948240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 10430349 - 10430479
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 266  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||||||  ||||||||| | ||||| |||| ||  ||||||||||  | | ||||||||    
T  10430349 gaaatggcaaaggcattataaactcacacacacaagtggaggtaccagggttcgaaccccagtcattgcatccggcctaacaatttcggcatttttgtca 10430448  T
Q  267 gttgagttagaacttctggatatcattaaca 297  Q
    |||||| ||| |||| | ||||| |||||||    
T  10430449 gttgagctaggacttgtcgatataattaaca 10430479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 15331080 - 15331157
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||| ||||||||||||||| ||| |  || |||||||  | ||||||||||||||||||||| ||| ||||||||||    
T  15331080 aaagtcattataaactcacatacacaagtggaggtaccggggttcgaacctcggtcatggcatccgacctaacaattt 15331157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 16261217 - 16261176
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacata 202  Q
    |||||| ||||||| |||||| ||||||||||||||||||||    
T  16261217 agatagatgaaatgataaagctattataaactcacacacata 16261176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 47429610 - 47429687
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||||||||||||||||||||||  || |||||||  | |||||||| || ||||||||| ||  ||||||||||    
T  47429610 aaagccattataaactcacacacataagtggaggtaccgggattcgaaccccgatcatggcatccggcctaacaattt 47429687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 5511889 - 5511781
Alignment:
Q  181 ccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 279  Q
    |||||||||||||||| |||||  || ||||||| | ||||||||| |  |||||||||||   |||||||||| || ||||| |||||| | |||  ||    
T  5511889 ccattataaactcacatacataaatggaggtaccgaagttcgaaccccaatcatggcattcagcctaacaatttcgacattttatcagtttaattaagac 5511790  T
Q  280 ttctggata 288  Q
    |||||||||    
T  5511789 ttctggata 5511781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 17068258 - 17068150
Alignment:
Q  181 ccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 279  Q
    |||||||||||||||||||| |  || |||||||  | |||||||| || ||||||||| ||  |||||||||| |  |||||  |||||||| ||| ||    
T  17068258 ccattataaactcacacacacaagtggaggtaccggggttcgaaccccgctcatggcatccggcctaacaatttcggcattttaccagttgagctaggac 17068159  T
Q  280 ttctggata 288  Q
    |||||||||    
T  17068158 ttctggata 17068150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 30455260 - 30455200
Alignment:
Q  230 tcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatatc 290  Q
    ||||||||| ||  |||||||||| || ||||| ||||||||| ||| |||||||||||||    
T  30455260 tcatggcatccggcctaacaatttcgacattttatcagttgagctaggacttctggatatc 30455200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 43500153 - 43500257
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||| ||| |  || ||||||||  ||| ||||| || |||| |||| ||| |||||||||| || |||||  |||    
T  43500153 gaaatggcaaagccattataaactcacatacacaaatggaggtaccagagtttgaaccccgatcatagcatccgacctaacaatttcgacattttaccag 43500252  T
Q  268 ttgag 272  Q
    |||||    
T  43500253 ttgag 43500257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 4069118 - 4069248
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  ||    
T  4069118 agataggcgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggtat 4069217  T
Q  260 tttgtcagttgagttagaacttctggatatc 290  Q
    |||| |||||||||||| |||||||||||||    
T  4069218 tttgccagttgagttaggacttctggatatc 4069248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 38261111 - 38261003
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| |||||||||||||||||||||  |||||||| ||| ||| |||||||||||||||||| ||  |||||||||| || ||||||||||||||| ||    
T  38261111 aaagtcattataaactcacacacataagtgaaggtatccaggttagaacctcggtcatggcatccggcctaacaatttcgacattttgtcagttgagcta 38261012  T
Q  276 gaacttctg 284  Q
    | |||||||    
T  38261011 ggacttctg 38261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 48612635 - 48612516
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  48612635 gaaatggcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 48612536  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  48612535 ttgagctaggacttctggat 48612516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 3497527 - 3497647
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  3497527 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 3497626  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  3497627 ttgagctaggacttctggata 3497647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 40013382 - 40013260
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 266  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||||||||||||||||||| ||  ||||||||||  | | ||||||||    
T  40013382 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggcatttttgtca 40013283  T
Q  267 gttgagttagaacttctggatat 289  Q
    |||||| ||| ||||||||||||    
T  40013282 gttgagctaggacttctggatat 40013260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 289
Target Start/End: Complemental strand, 18945050 - 18944921
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| ||||||||||||||||||||||||||  || ||||||||  ||||||||| ||||||||  || ||  |||||||||| |  ||    
T  18945050 agatagatgaaatggcaaagccattataaactcacacacataagtggaggtaccagggttcgaaccccggtcatgatatccggcctaacaatttcggcat 18944951  T
Q  260 tttgtcagttgagttagaacttctggatat 289  Q
    |||| |||||||  ||| ||||||||||||    
T  18944950 tttgccagttgaactaggacttctggatat 18944921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 35157094 - 35157215
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  35157094 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 35157193  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  35157194 ttgagctaggacttctggatat 35157215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 47086310 - 47086431
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 266  Q
    ||||||||||||||||||||||||||||||||||  || ||||| ||  ||||||||| || ||||||||| ||  |||||||||| || | ||||||||    
T  47086310 gaaatggtaaagccattataaactcacacacataagtggaggtaacagggttcgaaccccgatcatggcatccggcctaacaatttcgacatttttgtca 47086409  T
Q  267 gttgagttagaacttctggata 288  Q
    |||||| ||| |||| ||||||    
T  47086410 gttgagctaggacttatggata 47086431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 288
Target Start/End: Complemental strand, 4106680 - 4106552
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||    
T  4106680 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcat 4106581  T
Q  260 tttgtcagttgagttagaacttctggata 288  Q
    |||  |||||||| ||| |||||||||||    
T  4106580 tttaccagttgagctaggacttctggata 4106552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 4887523 - 4887643
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || | ||| || | ||||||||||||||||||||| ||  |||||||||| |  |||||| |||    
T  4887523 gaaatggcaaagccattataaactcacacacacaagtggatgtatcagggttcgaacctcggtcatggcatccggcctaacaatttcggcattttgccag 4887622  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  4887623 ttgagctaggacttctggata 4887643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 276
Target Start/End: Complemental strand, 7264523 - 7264415
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| |||||||||||||||||||||  || |||||||  | |||||||||||||||| |||| ||| || ||||||| |  ||||||||||    
T  7264523 gaaatggcaaagtcattataaactcacacacataagtggaggtaccgagattcgaacctcggtcatagcatccgacctcacaatttcggcattttgtcag 7264424  T
Q  268 ttgagttag 276  Q
    |||||||||    
T  7264423 ttgagttag 7264415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 37117863 - 37117975
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || || ||||| | |||||||| || ||||||||| ||| ||||||||||  | ||||||||||||||| ||    
T  37117863 aaagccattataaactcacacacacaagtggagttaccaggattcgaaccccgatcatggcatccgacctaacaatttcaacattttgtcagttgagcta 37117962  T
Q  276 gaacttctggata 288  Q
    | |||||||||||    
T  37117963 ggacttctggata 37117975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 6327329 - 6327210
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || | |||||  | |||||||| |||||||||||| ||  |||||||||||   ||||||||||    
T  6327329 gaaatggcaaagtcattataaactcacacacacaagtggatgtaccggggttcgaaccccggtcatggcatccggcctaacaatttttgcattttgtcag 6327230  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||| ||||||||||    
T  6327229 ttgagttaggacttctggat 6327210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 31717415 - 31717296
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  31717415 gaaatggcaaagccattataaactcacacacataagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 31717316  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  31717315 ttgagctaggacttctggat 31717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 6596666 - 6596537
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg---ttcgaacctcggtcatggcattcgatctaacaattttgaa 257  Q
    |||||| |||||||| |||||||||||||| |||||||  ||  |||||||||  ||   |||||||| |||||||||||| ||  ||||||||||||      
T  6596666 agatagttgaaatggcaaagccattataaattcacaca--taagtgaaggtac--tggaattcgaaccccggtcatggcatccggcctaacaattttggc 6596571  T
Q  258 attttgtcagttgagttagaacttctggatatca 291  Q
    |||||| |||||||| ||| ||||||||||||||    
T  6596570 attttgccagttgagctaggacttctggatatca 6596537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 26795032 - 26794909
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 265  Q
    ||||||| ||| ||||||||||||||||||||||    || |||||||   ||||||||| |||||||||||| ||||||||||||||||  |||||| |    
T  26795032 gaaatggcaaaaccattataaactcacacacatataagtggaggtaccggagttcgaaccccggtcatggcatccgatctaacaattttggcattttgcc 26794933  T
Q  266 agttgagttagaacttctggatat 289  Q
     |||||| ||| |||| |||||||    
T  26794932 ggttgagctaggacttgtggatat 26794909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 288
Target Start/End: Original strand, 47584693 - 47584801
Alignment:
Q  181 ccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 279  Q
    ||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||| | || |||||| |||||||| ||| ||    
T  47584693 ccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatgtcgacattttgccagttgagctaggac 47584792  T
Q  280 ttctggata 288  Q
    |||||||||    
T  47584793 ttctggata 47584801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 1573852 - 1573971
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||||||||||||||||||| ||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||  ||||    
T  1573852 aaatggtaaagccattataaacttacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccagt 1573951  T
Q  269 tgagttagaacttctggata 288  Q
    |||| ||| |||||||||||    
T  1573952 tgagctaggacttctggata 1573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 5523903 - 5523792
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||||||||||| ||||||| ||||  || ||||| || | |||||||| |||||||||||| ||| |||||||||| || ||||| | |||||||| |    
T  5523903 aaagccattataatctcacacgcataagtggaggtatcaggattcgaaccccggtcatggcatccgacctaacaatttcgacattttattagttgagtca 5523804  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  5523803 ggacttctggat 5523792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 10061026 - 10061145
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  10061026 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 10061125  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| |||| |||||    
T  10061126 ttgagctaggacttgtggat 10061145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 21226191 - 21226070
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||    
T  21226191 agatagatgaaatggcaaagacattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcat 21226092  T
Q  260 tttgtcagttgagttagaactt 281  Q
    |||| |||||||| ||| ||||    
T  21226091 tttgccagttgagataggactt 21226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 6369645 - 6369533
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||||||||||||||||||||||||||||||  || ||||| |  | | ||||| || ||||| ||| ||  |||||||||| |  |||||  ||||    
T  6369645 gaaatggtaaagccattataaactcacacacataagtggaggtatcggggttgaaccacgatcatgacatccggcctaacaatttcggcattttaccagt 6369546  T
Q  269 tgagttagaactt 281  Q
    |||||||||||||    
T  6369545 tgagttagaactt 6369533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 6378110 - 6377998
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||||||||||||||||||||||||||||||  || ||||| |  | | ||||| || ||||| ||| ||  |||||||||| |  |||||  ||||    
T  6378110 gaaatggtaaagccattataaactcacacacataagtggaggtatcggggttgaaccacgatcatgacatccggcctaacaatttcggcattttaccagt 6378011  T
Q  269 tgagttagaactt 281  Q
    |||||||||||||    
T  6378010 tgagttagaactt 6377998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 7312463 - 7312579
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||||||||||| ||||||| ||||||||| |  || |||||||  | |||||||| |||||||| ||| ||  ||||||||||||  |||||| |||    
T  7312463 gaaatggtaaagccgttataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattttgccag 7312562  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  7312563 ttgagctaggacttctg 7312579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 29151701 - 29151581
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||||||||||||||||||||||||||||| |  || |||||||   ||||||||| || |||| |||| ||  ||||||||||    |||||| |||    
T  29151701 gaaatggtaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcagcattttgccag 29151602  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  29151601 ttgagctaggacttctggata 29151581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 283
Target Start/End: Complemental strand, 37920080 - 37919972
Alignment:
Q  176 taaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtt 274  Q
    |||||||||||||||||||||||||||  || |||||||   ||||||| |  |||||||||||  || |||||||||| || |||||| |||||||| |    
T  37920080 taaagccattataaactcacacacataagtggaggtaccggggttcgaatccaggtcatggcatctgacctaacaatttcgatattttgccagttgagct 37919981  T
Q  275 agaacttct 283  Q
    || ||||||    
T  37919980 aggacttct 37919972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 41780365 - 41780260
Alignment:
Q  183 attataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 281  Q
    ||||||||||||||||||  | || |||||||| | |||||||| |||||||| ||| | | |||||||||| || ||||||  ||||||||||| ||||    
T  41780365 attataaactcacacaca--cgtggaggtaccagggttcgaaccccggtcatgacatccaacctaacaatttcgacattttgctagttgagttaggactt 41780268  T
Q  282 ctggatat 289  Q
    ||||||||    
T  41780267 ctggatat 41780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 990332 - 990229
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| |||||||||||||||||||| |||||  || ||||||||  ||||||||| || |||| |||| ||  ||||||||||||  ||| |||||||    
T  990332 aaatggcaaagccattataaactcacaaacataagtggaggtaccagggttcgaaccccgatcatagcatccggcctaacaattttgccattatgtcagt 990233  T
Q  269 tgag 272  Q
    ||||    
T  990232 tgag 990229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 10422588 - 10422477
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||| |||||||||||||||||| |  || |||||||  | |||||||| || ||||||||| ||| |||||||||| || |||||| |||||||| ||    
T  10422588 aaagcaattataaactcacacacacaagtggaggtaccgggattcgaaccccgatcatggcatccgacctaacaatttcgatattttgccagttgagcta 10422489  T
Q  276 gaacttctggat 287  Q
      ||||||||||    
T  10422488 agacttctggat 10422477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 16816809 - 16816706
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  16816809 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgcggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 16816710  T
Q  268 ttga 271  Q
    ||||    
T  16816709 ttga 16816706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 33628154 - 33628027
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  ||| |||||||||||||||||||| |  || ||||||||  |||||||||  ||||||||||| ||   ||||||||| |  |     
T  33628154 agatagatgaaatgacaaaaccattataaactcacacacacaagtggaggtaccagggttcgaaccctggtcatggcatccggcttaacaatttcggcac 33628055  T
Q  260 tttgtcagttgagttagaacttctggat 287  Q
    ||||||||||||| ||| ||||||||||    
T  33628054 tttgtcagttgagctaggacttctggat 33628027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 45041743 - 45041862
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||| ||||| ||| |||||||||| |  |||||| |||    
T  45041743 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcaaggcatccgacctaacaatttcggcattttgccag 45041842  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||  ||||||||||    
T  45041843 ttgagctaagacttctggat 45041862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 4227452 - 4227367
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||| ||||||||||    
T  4227452 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccgacctaacaattt 4227367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 19258542 - 19258457
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  19258542 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 19258457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 43133105 - 43133198
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| |||||   ||||||||||    
T  43133105 agataggcgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcagcctaacaattt 43133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 5508803 - 5508699
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||| ||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  5508803 gaaatggcaaagccattacaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 5508704  T
Q  268 ttgag 272  Q
    |||||    
T  5508703 ttgag 5508699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 11074952 - 11075055
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc--atgttcgaacctcggtcatggcattc-gatctaacaattttgaaattttgtc 265  Q
    ||||||| |||||||||||||||||||| |||||  ||||||||||  || |||||||  || ||||||  ||| || ||||||||||||| ||||||||    
T  11074952 gaaatggcaaagccattataaactcacatacataagtgaaggtaccggat-ttcgaactccgatcatgg--ttctgacctaacaattttgatattttgtc 11075048  T
Q  266 agttgag 272  Q
    |||||||    
T  11075049 agttgag 11075055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 17895744 - 17895632
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    |||||| |||||||| ||    
T  17895744 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcagcattttgccagttgagcta 17895645  T
Q  276 gaacttctggata 288  Q
    | ||||| |||||    
T  17895644 ggacttcaggata 17895632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 1869934 - 1869851
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaat 251  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||    
T  1869934 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaat 1869851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 3861346 - 3861465
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| || |||||| |||    
T  3861346 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgacattttgccag 3861445  T
Q  268 ttgagttagaacttctggat 287  Q
    || |  ||| ||||||||||    
T  3861446 ttaaactaggacttctggat 3861465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 9380060 - 9379989
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    ||||||||| |||||||| ||| ||  |||||||||| || |||||| |||||||| ||| |||||||||||    
T  9380060 gttcgaaccccggtcatgacatccggcctaacaatttcgacattttgccagttgagctaggacttctggata 9379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 10166979 - 10166873
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||| ||| |  || ||||||||  ||||||||| |||||||||||| ||  |||||||||| |  ||||| ||||||||| ||    
T  10166979 aaagccattataaactcacatacacaagtggaggtaccagagttcgaacc-cggtcatggcatccggcctaacaatttcggcattttatcagttgagcta 10166881  T
Q  276 gaacttct 283  Q
    | ||||||    
T  10166880 ggacttct 10166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 33228769 - 33228698
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaacttctggat 287  Q
    |||||||||||||||||||||| ||  |||||||||| || | ||||| |||||||| ||| ||||||||||    
T  33228769 gttcgaacctcggtcatggcatccggcctaacaatttcgacatttttgccagttgagctaggacttctggat 33228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 40656118 - 40656201
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaat 251  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||    
T  40656118 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaat 40656201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 40809163 - 40809044
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||||||  |||||||||  ||||||| ||| ||  ||||||| || |  |||||| |||    
T  40809163 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccagggttcgaaccctggtcatgacatccggcctaacaaattcggcattttgccag 40809064  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  40809063 ttgagctaggacttctggat 40809044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 45946820 - 45946705
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||||||| |||||||||||||| |  || ||||||| | ||||||||  | || ||||||| ||  |||| |||||||  ||||||||||||||| ||    
T  45946820 aaagccattgtaaactcacacacacaagtggaggtaccgaggttcgaactccagtaatggcatccggcctaataattttggcattttgtcagttgagcta 45946721  T
Q  276 gaacttctggatatca 291  Q
    | |||| |||||||||    
T  45946720 ggacttttggatatca 45946705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 46416667 - 46416548
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||| ||||||||||||||||||||||||||||  || ||||| |   |||||||  ||||||||||||| ||  |||||||| | |  |||||| |||    
T  46416667 gaaattgtaaagccattataaactcacacacataagtggaggtatcggagttcgaatttcggtcatggcatccggcctaacaatgtcggcattttgccag 46416568  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||  ||| ||||||||||    
T  46416567 ttgacctaggacttctggat 46416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 286
Target Start/End: Original strand, 27396324 - 27396442
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||| |  ||||||||| ||  |||||||||| |  |||||| |||    
T  27396324 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccaatcatggcatccggcctaacaatttcggcattttgccag 27396423  T
Q  268 ttgagttagaacttctgga 286  Q
    ||||| ||| |||||||||    
T  27396424 ttgagctaggacttctgga 27396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 28649376 - 28649461
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||| ||||| ||||||||||||||||||| |  || ||||||| | |||||||| ||| ||||| ||| ||| ||||||||||    
T  28649376 gaaatgataaagtcattataaactcacacacacaagtggaggtaccgaggttcgaacttcgatcatgacatccgacctaacaattt 28649461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 30627734 - 30627637
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgag 272  Q
    |||| |||| |||||||||||||| |  || |||||||  | ||||||||||| ||||| ||| |||||||||||||| || | ||||||||||||||    
T  30627734 aaagtcattgtaaactcacacacacaagtggaggtaccggggttcgaacctcgatcatgacatccgatctaacaatttcgacatttttgtcagttgag 30627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 40011999 - 40012068
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggca 237  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||    
T  40011999 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggca 40012068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 46715749 - 46715822
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaacttctggatat 289  Q
    ||||||||| ||||||||||||||   |||||||||| || | |||| ||||||||||||| |||||| |||||    
T  46715749 gttcgaaccccggtcatggcattctgcctaacaatttcgacatttttttcagttgagttaggacttctagatat 46715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 4674319 - 4674435
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||  ||  ||  ||||||||| |  |||||| |||    
T  4674319 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgatatctgacttaacaatttcggcattttgccag 4674418  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  4674419 ttgagctaggacttctg 4674435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 2596 - 2476
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| ||||||| |||| ||  |||||||||| || ||||||||||    
T  2596 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcgacattttgtcag 2497  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||||||  |||||||||||    
T  2496 ttgagttatgacttctggata 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 2596 - 2476
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| ||||||| |||| ||  |||||||||| || ||||||||||    
T  2596 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcgacattttgtcag 2497  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||||||  |||||||||||    
T  2496 ttgagttatgacttctggata 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 14285221 - 14285094
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||  |||||||||||| ||  ||||||||||||  ||    
T  14285221 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacgccggtcatggcatccggcctaacaattttggcat 14285122  T
Q  260 tttgtcagttgagttagaacttctggat 287  Q
    ||||||||||||| ||| ||||||||||    
T  14285121 tttgtcagttgagctaggacttctggat 14285094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 31263511 - 31263630
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| || ||||| ||||| || |||||| |||    
T  31263511 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggtctaataatttcgacattttgccag 31263610  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  31263611 ttgagctaggacttctggat 31263630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 7512885 - 7512765
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  ||||||||||||  |||||| |||    
T  7512885 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattttggcattttgccag 7512786  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  7512785 ttgagctaggacttctggata 7512765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 28983842 - 28983730
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| |||||||||||||||||||||  || |||||||   ||||||||| |||||||||||| ||| |||||||| | || |||||| |||||||| ||    
T  28983842 aaagtcattataaactcacacacataagtggaggtaccggagttcgaaccccggtcatggcatccgacctaacaatgtcgacattttgccagttgagcta 28983743  T
Q  276 gaacttctggata 288  Q
    |||||||||||||    
T  28983742 gaacttctggata 28983730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 49882719 - 49882838
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||||||||||||||||||||| ||  |||||||||| |  |||||| |||    
T  49882719 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggcattttgccag 49882818  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  49882819 ttgagctaggacttctggat 49882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 1052885 - 1052997
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| ||||||| ||||||||||||||||||||||| | |  || ||||||||  ||||||||| |||||||| ||| ||  |||||||||| || ||    
T  1052885 agatagatgaaatgataaagccattataaactcacacatacaagtggaggtaccagggttcgaaccccggtcatgacatccggcctaacaatttcgacat 1052984  T
Q  260 tttgtcagttgag 272  Q
    |||||||||||||    
T  1052985 tttgtcagttgag 1052997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 9569593 - 9569473
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  9569593 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 9569494  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  9569493 ttgagctaggacttctggata 9569473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 41323652 - 41323532
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||| |||||||  |||||||||||||||||| |  ||||||||||  | |||||||| |  |||| |||| |||||||||||||| || ||||| ||||    
T  41323652 gaaacggtaaagttattataaactcacacacagaagtgaaggtaccggggttcgaaccccaatcatagcatccgatctaacaatttcgacattttatcag 41323553  T
Q  268 ttgagttagaacttctggata 288  Q
    |||||||||||||||| ||||    
T  41323552 ttgagttagaacttcttgata 41323532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 49319849 - 49319729
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| || ||||||||||||||||||||| |   | |||||||| | |||||||| |||||||||||| ||  |||||||||| || ||||||| ||    
T  49319849 gaaatggcaacgccattataaactcacacacacaagcggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgttag 49319750  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  49319749 ttgagctaggacttctggata 49319729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 13389138 - 13389019
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||| ||||||||||    |||||| |||    
T  13389138 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcagcattttgccag 13389039  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  13389038 ttgagctaggacttctggat 13389019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 24712206 - 24712087
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||| |||||||||| |  |||||| |||    
T  24712206 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgccag 24712107  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  24712106 ttgagctaggacttctggat 24712087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 29894528 - 29894409
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||| |||||||||||||||||| |  || ||||||||  ||||||||| |||||||| ||| ||| |||| ||||| || |||||| |||    
T  29894528 gaaatggcaaagctattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccgacctaataatttcgacattttgccag 29894429  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  29894428 ttgagctaggacttctggat 29894409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 13632208 - 13632087
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 266  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||   | ||||||||||||||||||||| ||  |||||||||| || | ||||| ||    
T  13632208 gaaatggcaaagccattataaactcacacacacaagtggaggtactggggttcgaacctcggtcatggcatccggcctaacaatttcgacatttttgcca 13632109  T
Q  267 gttgagttagaacttctggata 288  Q
    |||||| ||| |||||||||||    
T  13632108 gttgagctaggacttctggata 13632087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 35616011 - 35615890
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  ||||  ||||||||||||||||||||  || |||||||| | |||||||| |||||||| |||  |  |||||||||| || ||    
T  35616011 agatagatgaaatgacaaagttattataaactcacacacataagtggaggtaccaggattcgaaccccggtcatgacatctggcctaacaatttcgacat 35615912  T
Q  260 tttgtcagttgagttagaactt 281  Q
    |||||||||||||| |||||||    
T  35615911 tttgtcagttgagtcagaactt 35615890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 5396950 - 5397069
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  5396950 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 5397049  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  5397050 ttgagctaggacttctggat 5397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 5880345 - 5880412
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctg 284  Q
    ||||||||| |||||||||||| || ||||||||||| || |||||| |||||||||||| |||||||    
T  5880345 gttcgaaccccggtcatggcatccggtctaacaatttcgacattttgccagttgagttaggacttctg 5880412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 30044594 - 30044713
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  30044594 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 30044693  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  30044694 ttgagctaggacttctggat 30044713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 35318658 - 35318539
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||| ||||||||||||||||| || |  ||||||||||| | |||||||| ||||||||  || ||  |||||||||| |  |||||| |||    
T  35318658 gaaatggcaaaaccattataaactcacacgcacaagtgaaggtaccaggattcgaaccccggtcatgatatccggcctaacaatttcggcattttgccag 35318559  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||| ||||||||||    
T  35318558 ttgagttaggacttctggat 35318539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 286
Target Start/End: Original strand, 42411998 - 42412116
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| ||||||||||||  |  |||||||||| |  |||||| |||    
T  42411998 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatctggcctaacaatttcggcattttgccag 42412097  T
Q  268 ttgagttagaacttctgga 286  Q
    ||||| ||  |||||||||    
T  42412098 ttgagctatgacttctgga 42412116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 17271425 - 17271304
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    ||||||||||||| | ||||||||||||||||||||||||||  || |||||||   |||| |||| | ||||||||||| |  |||||||||| |  ||    
T  17271425 agataggtgaaattgcaaagccattataaactcacacacataagtggaggtaccggggttcaaaccccagtcatggcatttggcctaacaatttcggcat 17271326  T
Q  260 tttgtcagttgagttagaactt 281  Q
    |||||| |||||| ||| ||||    
T  17271325 tttgtccgttgagctaggactt 17271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 579252 - 579356
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| || ||||| ||||    
T  579252 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgacattttatcag 579351  T
Q  268 ttgag 272  Q
    |||||    
T  579352 ttgag 579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 12821281 - 12821164
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||    || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  12821281 gaaatggcaaagccattataaactcacacacaag--tggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 12821184  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  12821183 ttgagctaggacttctggat 12821164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 33416590 - 33416706
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  |||||||||  | ||||| ||| || ||||||||||| |  |||||| |||    
T  33416590 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccctgatcatgacatccggtctaacaatttcggtattttgccag 33416689  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  33416690 ttgagctaggacttctg 33416706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 39997783 - 39997887
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||||| | ||||||||| ||||||||| || ||  |||||||||| || ||||| ||||    
T  39997783 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccgaggttcgaaccccggtcatggtatccggcctaacaatttcgacattttatcag 39997882  T
Q  268 ttgag 272  Q
    |||||    
T  39997883 ttgag 39997887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 42154147 - 42154267
Alignment:
Q  169 gaaatggtaaagccattat-aaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||||||||||||||| ||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| ||    
T  42154147 gaaatggtaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgcca 42154246  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||| ||| ||||||||||    
T  42154247 gttgagctaggacttctggat 42154267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 46488127 - 46488247
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||| ||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  46488127 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggtttgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 46488226  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  46488227 ttgagctaggacttctggata 46488247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 18813488 - 18813373
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||| | |||||||| ||| ||  |||||||||| |  |||||| |||    
T  18813488 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaagcccggtcatgacatccggcctaacaatttcggcattttgccag 18813389  T
Q  268 ttgagttagaacttct 283  Q
    ||||||||| ||||||    
T  18813388 ttgagttaggacttct 18813373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 23974652 - 23974771
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||  ||||||||  || ||  |||||||||| |  |||||| |||    
T  23974652 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaacaccggtcatgatatccggcctaacaatttcggcattttgccag 23974751  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  23974752 ttgagctaggacttctggat 23974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 24407605 - 24407502
Alignment:
Q  179 agccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttaga 277  Q
    |||||||||||| ||||||||| |  ||||||||||  | |||||| | |||||||||||| ||| |||||||||| || |||||| |||||||| |||     
T  24407605 agccattataaattcacacacacaagtgaaggtaccggggttcgaatcccggtcatggcatccgacctaacaatttcgacattttgccagttgagctagg 24407506  T
Q  278 actt 281  Q
    ||||    
T  24407505 actt 24407502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 28010053 - 28010180
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || || ||||   ||||||||| ||||||||  || |   ||||||||||||  ||    
T  28010053 agatagatgaaatggcaaagccattataaactcacacacacaagtggagttaccggggttcgaaccccggtcatgatatcctgcctaacaattttggcat 28010152  T
Q  260 tttgtcagttgagttagaacttctggat 287  Q
    |||| |||||||| ||| ||||||||||    
T  28010153 tttgccagttgagctaggacttctggat 28010180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 34684320 - 34684202
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  34684320 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 34684221  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  34684220 ttgagctag-acttctggat 34684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 48628474 - 48628561
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttg 255  Q
    ||||||| |||||||||||||||||||||||| |  ||||| ||||   ||||||||| | |||||||||| | ||||||||||||||    
T  48628474 gaaatggcaaagccattataaactcacacacacaaatgaagataccggggttcgaaccccagtcatggcatccaatctaacaattttg 48628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 54907902 - 54908017
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||| |||||||||  |||| |||||   |||| ||||||| ||||||||| ||  |||||||||| |  |||||| |||    
T  54907902 gaaatggcaaagccattataaacttacacacataaatgaatgtaccggggttcaaacctcgatcatggcatccggcctaacaatttcggcattttgccag 54908001  T
Q  268 ttgagttagaacttct 283  Q
    ||||| ||| ||||||    
T  54908002 ttgagctaggacttct 54908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 7944226 - 7944319
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  ||||||||||    
T  7944226 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattt 7944319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 29428173 - 29428053
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||| |||| |  || |||||||  | |||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  29428173 gaaatggcaaagccattataaactcactcacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggtattttgccag 29428074  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  29428073 ttgagctaggacttctggata 29428053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 35828394 - 35828271
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 265  Q
    ||||||| |||||||||||||| ||||||||| ||   || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |    
T  35828394 gaaatggcaaagccattataaattcacacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcc 35828295  T
Q  266 agttgagttagaacttctggatat 289  Q
    ||||||| ||| ||||||| ||||    
T  35828294 agttgagctaggacttctgaatat 35828271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 37050819 - 37050715
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || || || |   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  37050819 gaaatggcaaagccattataaactcacacacataagtggagctatcggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 37050720  T
Q  268 ttgag 272  Q
    |||||    
T  37050719 ttgag 37050715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 47462054 - 47462166
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  47462054 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 47462153  T
Q  276 gaacttctggata 288  Q
    | |||||| ||||    
T  47462154 ggacttctagata 47462166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 51675685 - 51675797
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||  || ||  |||||||||| || ||||||| ||||||| ||    
T  51675685 aaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccggtcatgatatccggcctaacaatttagatattttgttagttgagcta 51675784  T
Q  276 gaacttctggata 288  Q
    | |||| ||||||    
T  51675785 ggacttatggata 51675797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 12315932 - 12315971
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacaca 200  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  12315932 agatagatgaaatggcaaagccattataaactcacacaca 12315971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 18371456 - 18371349
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||||||||||||||||||||||||  || |||||||   |||| |||| | ||||||  |||||  |||||||||| |  |||||| |||||||| ||    
T  18371456 aaagccattataaactcacacacataagtggaggtaccggggttcaaaccccagtcatgatattcggcctaacaatttcggcattttgccagttgagcta 18371357  T
Q  276 gaacttct 283  Q
    ||||||||    
T  18371356 gaacttct 18371349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 24550931 - 24550812
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  24550931 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcattttgccag 24550832  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||  ||||||||||    
T  24550831 ttgagctaagacttctggat 24550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 31375223 - 31375112
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||| ||||||| |  || |||||||  | |||||||| ||||||||||||  |  |||| ||||| || |||||| |||||||||||    
T  31375223 aaagtcattataaacttacacacacaagtggaggtaccggggttcgaaccccggtcatggcatctggcctaataatttcgacattttggcagttgagtta 31375124  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  31375123 ggacttctggat 31375112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 32104012 - 32104051
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacaca 200  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  32104012 agatagatgaaatggcaaagccattataaactcacacaca 32104051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 54096958 - 54097065
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  || |||||||   |||||||| ||||||||| ||| |||||||| ||||| |  |||||| || ||||||||    
T  54096958 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaacgtcggtcatgacatccgatctaataatttcggcattttgccacttgagtta 54097057  T
Q  276 gaacttct 283  Q
    | ||||||    
T  54097058 gtacttct 54097065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 25586345 - 25586447
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    ||||||||||||||||||||||||||  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  ||||||  ||||||| ||    
T  25586345 aaagccattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgctagttgagcta 25586444  T
Q  276 gaa 278  Q
    |||    
T  25586445 gaa 25586447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 37166256 - 37166142
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  37166256 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcattttgccag 37166157  T
Q  268 ttgagttagaacttc 282  Q
    ||||| ||| |||||    
T  37166156 ttgagctaggacttc 37166142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 939691 - 939586
Alignment:
Q  183 attataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 281  Q
    ||||||||||||||||||||  || ||||||| || |||||||| || | |||  ||    |||||| |||| || ||||||||||||||||||||||||    
T  939691 attataaactcacacacataagtggaggtaccgtggttcgaaccccgattatgatatcatgtctaacgatttcgacattttgtcagttgagttagaactt 939592  T
Q  282 ctggat 287  Q
     |||||    
T  939591 atggat 939586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 5060496 - 5060541
Alignment:
Q  244 ctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    |||||||||| || ||||| ||||||||||||| ||||||||||||    
T  5060496 ctaacaatttcgacattttatcagttgagttaggacttctggatat 5060541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 6328853 - 6328894
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacata 202  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||    
T  6328853 agataggcgaaatggcaaaaccattataaactcacacacata 6328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 11310186 - 11310219
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||| ||||||||||||||||||||||||||||    
T  11310186 gaaattgtaaagccattataaactcacacacata 11310219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 17846760 - 17846873
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||| ||||||||||||| |  || ||||||| | |||||||||||| |||| | || |   |||||||||| || |||||| |||    
T  17846760 gaaatggcaaagtcattagaaactcacacacacaagtggaggtaccgaggttcgaacctcgatcataggatccagcctaacaatttcgacattttgccag 17846859  T
Q  268 ttgagttagaactt 281  Q
    ||||| ||||||||    
T  17846860 ttgagctagaactt 17846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 31583613 - 31583646
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||||| ||||||||||||||||||||||||||    
T  31583613 gaaatggcaaagccattataaactcacacacata 31583646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 43173646 - 43173683
Alignment:
Q  241 gatctaacaattttgaaattttgtcagttgagttagaa 278  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  43173646 gatctaacaattttgatattttatcagttgagttagaa 43173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 55853337 - 55853370
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    |||| |||||||||||||||||||||||||||||    
T  55853337 gaaacggtaaagccattataaactcacacacata 55853370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 36752401 - 36752357
Alignment:
Q  244 ctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    |||||||||| |  ||||||||||||||||||| |||||||||||    
T  36752401 ctaacaatttcggcattttgtcagttgagttaggacttctggata 36752357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 54864506 - 54864398
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  |  ||||||| | |||| |||| || ||||||||| ||| ||||||||||||| ||||||  ||||||  ||    
T  54864506 aaagtcattataaactcacacacacaagttgaggtaccgaggttcaaaccccgatcatggcatccgacctaacaattttgacattttgctagttgatcta 54864407  T
Q  276 gaacttctg 284  Q
    | |||||||    
T  54864406 ggacttctg 54864398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 1068 - 1188
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  1068 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 1167  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  1168 ttgagctaggacttctggata 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 42448329 - 42448209
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  42448329 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 42448230  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  42448229 ttgagctaggacttctggata 42448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 23311183 - 23311302
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  23311183 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 23311282  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  23311283 ttgagctaggacttctggat 23311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 26802452 - 26802333
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  26802452 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 26802353  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||  ||||||||||    
T  26802352 ttgagttaagacttctggat 26802333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 26810002 - 26809883
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  26810002 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 26809903  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||  ||||||||||    
T  26809902 ttgagttaagacttctggat 26809883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 26825029 - 26824910
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  26825029 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 26824930  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||  ||||||||||    
T  26824929 ttgagttaagacttctggat 26824910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 24652324 - 24652445
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||| || | |||||||||||| ||  |||||||||| || |||||| |||    
T  24652324 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcaaatcccggtcatggcatccggcctaacaatttcgacattttgccag 24652423  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||||||| ||||||||||||    
T  24652424 ttgagttaggacttctggatat 24652445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 25328314 - 25328435
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||||||||||||||||||||| ||  |||||||||| |  |||||| |||    
T  25328314 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggcattttgccag 25328413  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| |||||| |||||    
T  25328414 ttgagctaggacttctagatat 25328435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 11968894 - 11968774
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||| ||||| |  || ||||||   | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  11968894 gaaatggcaaagccattataaactcatacacacaagtggaggtactggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgacag 11968795  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||||||| |||||||||||    
T  11968794 ttgagttaggacttctggata 11968774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 27389937 - 27390041
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || ||||||| | ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  27389937 gaaatggcaaagccattataaactcacacacataagtggaggtaccgaggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 27390036  T
Q  268 ttgag 272  Q
    |||||    
T  27390037 ttgag 27390041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 29119724 - 29119608
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  29119724 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 29119625  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  29119624 ttgagctaggacttctg 29119608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 33028348 - 33028228
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||||||||||||||||||||||||||||||  || | |||||   ||||||||| |||||||| ||| ||  ||||||||||||  ||||||||||    
T  33028348 gaaatggtaaagccattataaactcacacacataagtggaagtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattttgtcag 33028249  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||  ||| |||||| ||||    
T  33028248 ttgaactaggacttcttgata 33028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 4617776 - 4617895
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||    
T  4617776 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccag 4617875  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  4617876 ttgagctaggacttctggat 4617895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 16496718 - 16496599
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  16496718 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 16496619  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||  ||| ||||||||||    
T  16496618 ttgaactaggacttctggat 16496599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 17869134 - 17869253
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||| |||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  17869134 gaaatggcaaagccattataaattcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 17869233  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  17869234 ttgagctaggacttctggat 17869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 18115211 - 18115092
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||| | |||||| || || ||  ||||||||||||| ||||||  ||    
T  18115211 gaaatggcaaagccattataaactcacacacataagtggaggtaccgggtttcgaatcccggtcacggtatccggcctaacaattttgacattttgctag 18115112  T
Q  268 ttgagttagaacttctggat 287  Q
    |||||||||||||| |||||    
T  18115111 ttgagttagaacttttggat 18115092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 36569397 - 36569278
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  36569397 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 36569298  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  36569297 ttgagctaggacttctggat 36569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 40044926 - 40045045
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||| | | ||||||||  ||||||||||| ||| |||||||||| |  |||||| |||    
T  40044926 gaaatggcaaagccattataaactcacacacacaagtggaggtactaggattcgaaccctggtcatggcatccgacctaacaatttcggcattttgccag 40045025  T
Q  268 ttgagttagaacttctggat 287  Q
     |||| ||||||||||||||    
T  40045026 ctgagctagaacttctggat 40045045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 285
Target Start/End: Complemental strand, 38683046 - 38682929
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  ||| ||||||  | |||||||| |||||||||||| |   ||||||||||||  |||||| |||    
T  38683046 gaaatggcaaagccattataaactcacacacacaagtgagggtaccggggttcgaaccccggtcatggcatccagcctaacaattttggcattttgccag 38682947  T
Q  268 ttgagttagaacttctgg 285  Q
    ||||| ||| ||||||||    
T  38682946 ttgagctaggacttctgg 38682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 4165077 - 4164957
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  4165077 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 4164978  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  4164977 ttgagctaggacttctggata 4164957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 29806685 - 29806565
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||   ||||||||| | |||||||||| ||  ||||||||||||  |||||  |||    
T  29806685 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccagtcatggcatccggcctaacaattttggcattttaccag 29806586  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| | |||||||||    
T  29806585 ttgagctaggatttctggata 29806565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 39143519 - 39143439
Alignment:
Q  208 aggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    |||||||  |||||||||||||||||||||||||  |||||||||| || |||||| |||||||| ||| |||| ||||||    
T  39143519 aggtaccgggttcgaacctcggtcatggcattcggcctaacaatttcgacattttgccagttgagctaggacttgtggata 39143439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 39150944 - 39151056
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||||||| ||    
T  39150944 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccagttgagcta 39151043  T
Q  276 gaacttctggata 288  Q
    | |||||||||||    
T  39151044 ggacttctggata 39151056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 1650417 - 1650290
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||    
T  1650417 agataggcgaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcggcat 1650318  T
Q  260 tttgtcagttgagttagaacttctggat 287  Q
    ||||   |||||| ||| ||||||||||    
T  1650317 tttgcaggttgagctaggacttctggat 1650290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 6672359 - 6672240
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  6672359 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 6672260  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  6672259 ttgagctaggacttctggat 6672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 18474032 - 18473913
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||| |||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  18474032 gaaatggcaaagccattataacctcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 18473933  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  18473932 ttgagctaggacttctggat 18473913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 41562576 - 41562457
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||||||| ||  |||||||||| |  |||||| |||    
T  41562576 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaactccggtcatggcatccggcctaacaatttcggcattttgccag 41562477  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  41562476 ttgagctaggacttctggat 41562457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 1269521 - 1269651
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||  ||||| || ||||||||||||| |||  || |||||||  | |||||||| |  ||||||||| ||  |||||||||| || ||    
T  1269521 agatagatgaaatgacaaagctatcataaactcacacaaataagtggaggtaccggggttcgaaccccaatcatggcatccggcctaacaatttcgacat 1269620  T
Q  260 tttgtcagttgagttagaacttctggatatc 290  Q
    ||||||||||||| ||| |||||||||||||    
T  1269621 tttgtcagttgagctaggacttctggatatc 1269651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 18625625 - 18625746
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||| | |  || ||||||   | |||||||| || |||||||||  |  ||||||||||||  |||||| |||    
T  18625625 gaaatggcaaagccattataaactcacacatacaagtggaggtactggggttcgaaccccgatcatggcatctggactaacaattttggcattttgccag 18625724  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||||||| ||||||||||||    
T  18625725 ttgagttaggacttctggatat 18625746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 34856699 - 34856614
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  34856699 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 34856614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 1244194 - 1244310
Alignment:
Q  172 atggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttg 270  Q
    |||| ||||||||||||||| |||||||  |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||||||    
T  1244194 atggcaaagccattataaacccacacactcaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttg 1244293  T
Q  271 agttagaacttctggat 287  Q
    || ||| ||||||||||    
T  1244294 agctaggacttctggat 1244310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 23074654 - 23074774
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 266  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||  | | ||||| ||    
T  23074654 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcatttttgcca 23074753  T
Q  267 gttgagttagaacttctggat 287  Q
    |||||| ||| ||||||||||    
T  23074754 gttgagctaggacttctggat 23074774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 29622314 - 29622238
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||||||||||||||||||||||  || ||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  29622314 aaagccattataaactcacacacataagtggaggtacggggttcgaaccccggtcatggcatccggcctaacaattt 29622238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 34930343 - 34930239
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  34930343 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 34930244  T
Q  268 ttgag 272  Q
    |||||    
T  34930243 ttgag 34930239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 9053989 - 9054100
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || ||||| |  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  9053989 aaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccggtcatggcatccggcctaacaatttcggtattttgccagttgagcta 9054088  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  9054089 ggacttctggat 9054100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 12665212 - 12665093
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| |||||||||||||| ||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||| ||||| |  |||||||||||    
T  12665212 aaatggcaaagccattataaattcacacacacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaataatttcggcattttgtcagt 12665113  T
Q  269 tgagttagaacttctggata 288  Q
    |||  ||| |||||||||||    
T  12665112 tgaactaggacttctggata 12665093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 24051513 - 24051402
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||| ||| |  || |||||||| | |||||||| |||||||||||| ||  |||| ||||||   |||||| |||||||||||    
T  24051513 aaagtcattataaactcacatacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaataattttagcattttgccagttgagtta 24051414  T
Q  276 gaacttctggat 287  Q
    | ||||||||||    
T  24051413 ggacttctggat 24051402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 24443877 - 24443996
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||| ||||| |||||||  ||| ||| |||||||||| |  |||||| |||    
T  24443877 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggtttgaaccccggtcataacatccgacctaacaatttcggtattttgccag 24443976  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  24443977 ttgagctaggacttctggat 24443996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 1287431 - 1287314
Alignment:
Q  171 aatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 269  Q
    ||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||| |||||||||| |  |||||  || ||    
T  1287431 aatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttaccaatt 1287332  T
Q  270 gagttagaacttctggat 287  Q
    ||| ||| ||||||||||    
T  1287331 gagctaggacttctggat 1287314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 7179325 - 7179430
Alignment:
Q  183 attataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 281  Q
    ||||||||||||||||||||  || |||||| | | || ||| | ||||||||||||  |  |||||||||| || |||||| |||||||| ||||||||    
T  7179325 attataaactcacacacataagtggaggtacaaggatttgaatcccggtcatggcatctggcctaacaatttcgacattttgccagttgagctagaactt 7179424  T
Q  282 ctggat 287  Q
    ||||||    
T  7179425 ctggat 7179430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 36105127 - 36105168
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacata 202  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  36105127 agatagatgaaatggtaaagctattataaactcacacacata 36105168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 36259914 - 36259821
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 262  Q
    |||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||| ||| ||  |||||||||| || |||||    
T  36259914 aaatggcaaagccattataaactcacacacataagtggaggtaccgggattcgaaccccggtcatgacatccggcctaacaatttcgacatttt 36259821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 36854168 - 36854253
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  36854168 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 36854253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 671069 - 671189
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| || || ||||| |   ||||||||| || ||||| ||| ||| |||||||||| |  |||||| |||    
T  671069 gaaatggcaaagtcattataaactcacacacacacgtggaggtatcggggttcgaaccccgatcatgacatccgacctaacaatttcggcattttgccag 671168  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||  ||| |||||||||||    
T  671169 ttgaactaggacttctggata 671189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 2103136 - 2103024
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||| | || ||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  2103136 aaagccattataaactcacacacacaagtgtaggtaccggggttcgaatcccgatcatggcatccggcctaacaatttcggcattttgccagttgagcta 2103037  T
Q  276 gaacttctggata 288  Q
    | |||||||||||    
T  2103036 ggacttctggata 2103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 12819556 - 12819671
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    |||||||||||||||||||||||||||||| | |  |||||||||| | |||| |||| |||| ||||||  ||| |||||||||| |  |||||  ||     
T  12819556 gaaatggtaaagccattataaactcacacatacaagtgaaggtaccgaggttcaaaccacggttatggca-ccgacctaacaatttcggcattttaccaa 12819654  T
Q  268 ttgagttagaacttctg 284  Q
    ||||||||| |||||||    
T  12819655 ttgagttaggacttctg 12819671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 17080570 - 17080462
Alignment:
Q  182 cattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaact 280  Q
    ||||||||| |||||||||||  || ||||||| | ||||||||| | |||||| ||| |||  ||||||||| || ||||||||||||||| ||  |||    
T  17080570 cattataaattcacacacataagtggaggtaccgaggttcgaacccccgtcatgacatccgacttaacaatttcgacattttgtcagttgagctacgact 17080471  T
Q  281 tctggatat 289  Q
    |||| ||||    
T  17080470 tctgaatat 17080462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 288
Target Start/End: Original strand, 28143254 - 28143362
Alignment:
Q  181 ccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 279  Q
    |||||||||||||||||||| |  || |||||||  | |||||||| | |||||||||| ||  |||||||||| |  |||||| |||||||| ||| ||    
T  28143254 ccattataaactcacacacacaagtggaggtaccggggttcgaaccccagtcatggcatccggcctaacaatttcggcattttgccagttgagctaggac 28143353  T
Q  280 ttctggata 288  Q
    |||||||||    
T  28143354 ttctggata 28143362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 37067816 - 37067699
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    ||||||| |||| |||||||||||||||||||    || ||||||   ||||||||  |||||||||||| ||  |||||||||| |  |||||||||||    
T  37067816 gaaatggcaaagtcattataaactcacacacaag--tggaggtacggggttcgaactccggtcatggcatccggcctaacaatttcggcattttgtcagt 37067719  T
Q  269 tgagttagaacttctggata 288  Q
    |||| ||| |||||| ||||    
T  37067718 tgaggtaggacttctagata 37067699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 37191362 - 37191258
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||| | || ||||||||| |   ||||||||||||  |||||| |||    
T  37191362 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaatcccgatcatggcatccagcctaacaattttggcattttgccag 37191263  T
Q  268 ttgag 272  Q
    |||||    
T  37191262 ttgag 37191258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 42068651 - 42068539
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| |   |||||||||| |  |||||| ||| |||| ||    
T  42068651 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccagcctaacaatttcggcattttgccagctgagcta 42068552  T
Q  276 gaacttctggata 288  Q
    | |||||||||||    
T  42068551 ggacttctggata 42068539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 276
Target Start/End: Complemental strand, 42653647 - 42653551
Alignment:
Q  181 ccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 276  Q
    ||||| ||||||||||||||||  || || || | | |||| |||| |||||||| ||| || ||||||||||| || |||||||||||||||||||    
T  42653647 ccattttaaactcacacacataagtggagatatcgaagttcaaaccccggtcatgacatccggtctaacaatttcgacattttgtcagttgagttag 42653551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 10165642 - 10165531
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  || |||||||  | |||||||| || ||||||||| || ||||||||||| |  |||||| || ||||||||    
T  10165642 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggtctaacaatttcggcattttgccaattgagtta 10165543  T
Q  276 gaacttctggat 287  Q
    | |||| |||||    
T  10165542 ggacttatggat 10165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 16371482 - 16371513
Alignment:
Q  169 gaaatggtaaagccattataaactcacacaca 200  Q
    ||||||||||||||||||||||||||||||||    
T  16371482 gaaatggtaaagccattataaactcacacaca 16371513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 16906468 - 16906429
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacaca 200  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  16906468 agatagatgaaatggcaaagccattataaactcacacaca 16906429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 6053110 - 6053176
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttct 283  Q
    ||||||||| |||||||| ||| ||| |||||||||| |  ||||||||||||||| ||| ||||||    
T  6053110 gttcgaaccccggtcatgacatccgacctaacaatttcggcattttgtcagttgagctaggacttct 6053176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 10154221 - 10154287
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttct 283  Q
    ||||||||| |||||||||||| ||  || ||||||| |  ||||||||||||||||||| ||||||    
T  10154221 gttcgaaccccggtcatggcatccggcctgacaatttcggcattttgtcagttgagttaggacttct 10154287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 2025704 - 2025805
Alignment:
Q  182 cattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaact 280  Q
    |||||||||||||||||||||  || |||||||   ||||||||| || ||||| ||| ||| ||||||||||    ||||| ||||||||||||| |||    
T  2025704 cattataaactcacacacataagtggaggtaccggagttcgaaccccgatcatgacatccgacctaacaatttccgcattttatcagttgagttaggact 2025803  T
Q  281 tc 282  Q
    ||    
T  2025804 tc 2025805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 6041856 - 6041973
Alignment:
Q  171 aatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 269  Q
    ||||| ||||||| |||||||||||||||| |  ||||||||||   ||||||| | ||||||| |||| ||  |||| ||||| || |||||  |||||    
T  6041856 aatggcaaagccaatataaactcacacacacaagtgaaggtaccggggttcgaatcccggtcatagcatccggcctaataatttcgacattttaccagtt 6041955  T
Q  270 gagttagaacttctggat 287  Q
    ||| ||| ||||||||||    
T  6041956 gagctaggacttctggat 6041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 9640544 - 9640577
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||||| ||||||||||||||||||||||||||    
T  9640544 gaaatggcaaagccattataaactcacacacata 9640577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 10109897 - 10109934
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacaca 198  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  10109897 agatagatgaaatggcaaagccattataaactcacaca 10109934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 29293524 - 29293617
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||| |||||||| ||||| ||||| |||||||||||| |  || ||||||| | ||||||||| || ||||||||| ||  ||||||||||    
T  29293524 agatagatgaaatggcaaagctattatgaactcacacacacaagtggaggtaccgaggttcgaaccccgatcatggcatccggcctaacaattt 29293617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 36136886 - 36136991
Alignment:
Q  183 attataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 281  Q
    |||||||||||||||||| |  || |||||||   ||||||||| ||||||| |||||||  |||||||||| |  ||||||  ||||||| ||| ||||    
T  36136886 attataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatagcattcggcctaacaatttcggcattttgctagttgagctaggactt 36136985  T
Q  282 ctggat 287  Q
    ||||||    
T  36136986 ctggat 36136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 19867283 - 19867335
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtac 213  Q
    ||||||| ||||||  |||| |||||||||||||||||||||  |||||||||    
T  19867283 agataggcgaaatgacaaagtcattataaactcacacacataagtgaaggtac 19867335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 23219179 - 23219251
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    ||||||||| || ||||||||| ||  ||||||||||||  |||||  |||||||||||| ||||||| ||||    
T  23219179 gttcgaaccccgatcatggcatacggcctaacaattttggcattttaccagttgagttaggacttctgcatat 23219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 23310458 - 23310398
Alignment:
Q  228 ggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 288  Q
    ||||||||||| ||  ||||||||||||  |||||| |||||||| ||| |||||||||||    
T  23310458 ggtcatggcatccggcctaacaattttggtattttgccagttgagctaggacttctggata 23310398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 36246012 - 36246119
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||| | |  ||||| ||||||||||||    
T  36246012 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatgtcg-cattttttcagttgagtta 36246110  T
Q  276 gaacttctg 284  Q
    | |||||||    
T  36246111 ggacttctg 36246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 411766 - 411647
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||| ||||||||| |  || ||||||   | |||||||| |||||||| ||| ||| ||||||||||||| |||||| |||    
T  411766 gaaatggcaaagccattataaaatcacacacacaagtggaggtactggggttcgaaccccggtcatgacatccgacctaacaattttgacattttgccag 411667  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||||||||||||| ||||    
T  411666 ttgagttagaacttcaggat 411647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 4083704 - 4083586
Alignment:
Q  170 aaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 268  Q
    |||||| ||||||||||||||||||| |||| |  || |||||||  |||||||||| |||||||||||| ||| |||||||||| |  |||||| ||||    
T  4083704 aaatggcaaagccattataaactcacgcacacaagtggaggtaccggtgttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccagt 4083605  T
Q  269 tgagttagaacttctggat 287  Q
    |||| ||| ||||||||||    
T  4083604 tgagctaggacttctggat 4083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 8448152 - 8448272
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  8448152 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 8448251  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  8448252 ttgagctaggacttctggata 8448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 8456956 - 8457076
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  8456956 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 8457055  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  8457056 ttgagctaggacttctggata 8457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 8939744 - 8939624
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||| |||||||||| |  |||||| |||    
T  8939744 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgccag 8939645  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| ||| |||||||||||    
T  8939644 ttgagctaggacttctggata 8939624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 18861777 - 18861893
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  18861777 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 18861876  T
Q  268 ttgagttagaacttctg 284  Q
    ||||| ||| |||||||    
T  18861877 ttgagctaggacttctg 18861893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 2959111 - 2958996
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||    
T  2959111 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccag 2959012  T
Q  268 ttgagttagaacttct 283  Q
    |||| |||||||||||    
T  2959011 ttgaattagaacttct 2958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 6266758 - 6266646
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 259  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| || ||||||||||| || ||    
T  6266758 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcgacat 6266659  T
Q  260 tttgtcagttgag 272  Q
    |||| ||||||||    
T  6266658 tttgccagttgag 6266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 7098924 - 7098805
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||| | |||||||||   |||||||||| ||  |||||||||| || |||||  |||    
T  7098924 gaaatggcaaagccattataaactcacacacacaagtggaggtaccaaggttcgaaccctagtcatggcatccggcctaacaatttcgacattttaccag 7098825  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  7098824 ttgagctaggacttctggat 7098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 10181163 - 10181044
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||| || ||| | ||| ||| |||||||||| |  |||||| |||    
T  10181163 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccgatcacgacatccgacctaacaatttcggcattttgccag 10181064  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  10181063 ttgagctaggacttctggat 10181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 10531496 - 10531385
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||| | |  || |||||||  | |||||||| || |||| |||| ||  |||||||||| || ||||||||||||||| ||    
T  10531496 aaagccattataaactcacacataaaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcgatattttgtcagttgagcta 10531397  T
Q  276 gaacttctggat 287  Q
    ||||||||||||    
T  10531396 gaacttctggat 10531385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 735561 - 735443
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| ||||||||||||||||||||||||    || |||||||  | |||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  735561 gaaatggcaaagccattataaactcacacacaag--tggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 735464  T
Q  268 ttgagttagaacttctggata 288  Q
    ||||| |||||||||||||||    
T  735463 ttgagctagaacttctggata 735443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 4480592 - 4480471
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||| |  | |||||||| |  ||||||||| ||  |||||||||| |  |||||| |||    
T  4480592 gaaatggcaaagccattataaactcacacacacaagtggaggtaacggggttcgaaccccaatcatggcatccggcctaacaatttcggcattttgccag 4480493  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||||||| ||||||||||||    
T  4480492 ttgagttaggacttctggatat 4480471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 31205193 - 31205314
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||   | |||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  31205193 gaaatggcaaagccattataaactcacacacacaagtggaggtactggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 31205292  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  31205293 ttgagctaggacttctggatat 31205314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 5603457 - 5603576
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||| || | |||||||| |||||||||||| ||  |||| ||||| |  |||||  |||    
T  5603457 gaaatggcaaagtcattataaactcacacacacaagtggaggtatcagggttcgaaccccggtcatggcatccggcctaataatttcggcatttttccag 5603556  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||||||||||||||    
T  5603557 ttgagctagaacttctggat 5603576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 8329568 - 8329687
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  || ||| |||    
T  8329568 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcatattgccag 8329667  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| |||| |||||    
T  8329668 ttgagctaggacttttggat 8329687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 8374252 - 8374141
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 275  Q
    |||||||||||||||||||||| |||  || ||||| || | |||||||| || ||||||||| |   |||||||||| |  |||||  |||||||||||    
T  8374252 aaagccattataaactcacacatataagtggaggtatcagggttcgaaccccgatcatggcatcccgcctaacaatttcggcattttaccagttgagtta 8374153  T
Q  276 gaacttctggat 287  Q
    ||||||||||||    
T  8374152 gaacttctggat 8374141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 32643734 - 32643858
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacc----tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttg 263  Q
    |||||||||||||||||||||||||| ||||| ||     || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||     
T  32643734 gaaatggtaaagccattataaactcagacacacacacaagtggaggtaccgggattcgaaccccggtcatggcatccggcctaacaatttcggcatttta 32643833  T
Q  264 tcagttgagttagaacttctggata 288  Q
     |||||||||||| |||||||||||    
T  32643834 ccagttgagttaggacttctggata 32643858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 2395575 - 2395652
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||||||||||||||||| |||||  ||||| || || | |||||||| |||||||||||| ||| ||||||||||    
T  2395575 aaagccattataaactcacatacataaatgaagatatcaggattcgaaccccggtcatggcatccgacctaacaattt 2395652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 12795029 - 12795114
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||  ||||||||||    
T  12795029 gaaatggcaaagccattataaactcacacacataagtggaggtaccgcggttcgaaccccggtcatgacatccggcctaacaattt 12795114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 28594101 - 28594201
Alignment:
Q  189 aactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 287  Q
    |||||||||||| |  || ||||||| | ||||||||| || ||||||||| ||  |||||||||| ||  ||||| |||||||||||| ||||||||||    
T  28594101 aactcacacacacaagtggaggtaccgaggttcgaaccccgatcatggcatccggcctaacaatttcgaccttttgccagttgagttaggacttctggat 28594200  T
Q  288 a 288  Q
    |    
T  28594201 a 28594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 5626070 - 5626101
Alignment:
Q  169 gaaatggtaaagccattataaactcacacaca 200  Q
    ||||||||||||||||||||||||||||||||    
T  5626070 gaaatggtaaagccattataaactcacacaca 5626101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 11152585 - 11152519
Alignment:
Q  218 ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctg 284  Q
    |||||||| |||||||||||| ||   |||||||||||  |||| ||||||||||||| ||||||||    
T  11152585 ttcgaaccccggtcatggcatccggcttaacaattttggcatttggtcagttgagttaaaacttctg 11152519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 34539418 - 34539340
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcat 238  Q
    |||||| |||||||  ||||| ||||||||||||||||||||  || |||||||  | |||||||| ||||||||||||    
T  34539418 agatagatgaaatgacaaagctattataaactcacacacataagtggaggtaccgggtttcgaaccccggtcatggcat 34539340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 2301388 - 2301493
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||||||||||||| |||||||||| |  || |||||||  | |||||||| |||| ||| ||| ||| ||||||||||||  |||||| ||    
T  2301388 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggttatgacatccgacctaacaattttggcattttgcca 2301487  T
Q  267 gttgag 272  Q
    ||||||    
T  2301488 gttgag 2301493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 3456519 - 3456474
Alignment:
Q  244 ctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    ||||||||||||| ||||||||||||||  ||||||||||| ||||    
T  3456519 ctaacaattttgacattttgtcagttgaactagaacttctgaatat 3456474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 4891134 - 4891093
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacata 202  Q
    |||||| | |||||| ||||||||||||||||||||||||||    
T  4891134 agatagataaaatggcaaagccattataaactcacacacata 4891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 5660517 - 5660432
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  ||||||||||    
T  5660517 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaattt 5660432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 10330923 - 10330802
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaatttt-gaaattttgtca 266  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||| || ||||||||||||  |  ||||||||||| | | ||||| ||    
T  10330923 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgatccccggtcatggcatctggcctaacaattttggcatttttgcca 10330824  T
Q  267 gttgagttagaacttctggata 288  Q
    |||||| ||| |||| ||||||    
T  10330823 gttgagctaggacttgtggata 10330802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 10263096 - 10263200
Alignment:
Q  184 ttataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttc 282  Q
    ||||||||||||||||| |  || |||||| | | |||||||| |||||||||||| ||  |||||||||| |  | |||| |||||||| ||| |||||    
T  10263096 ttataaactcacacacacaagtggaggtactagggttcgaaccccggtcatggcatccggcctaacaatttcggcactttgccagttgagctaggacttc 10263195  T
Q  283 tggat 287  Q
    |||||    
T  10263196 tggat 10263200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 14982679 - 14982783
Alignment:
Q  184 ttataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttc 282  Q
    ||||||||||||||||| |  || |||||||| | ||||||||||||| ||||||| ||  |||||||||| |  |||||| ||||| || ||| ||||     
T  14982679 ttataaactcacacacacaagtggaggtaccagggttcgaacctcggttatggcatccggcctaacaatttcggtattttggcagttaagctaggacttg 14982778  T
Q  283 tggat 287  Q
    |||||    
T  14982779 tggat 14982783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 17534582 - 17534654
Alignment:
Q  217 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 289  Q
    ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||||||| ||| ||||||||||||    
T  17534582 gttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccagttgagctaggacttctggatat 17534654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 1251 - 1372
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  1251 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 1350  T
Q  268 ttgagttagaacttctggatat 289  Q
    ||||| ||| ||||||||||||    
T  1351 ttgagctaggacttctggatat 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 8869 - 8988
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||||||||||||| |||||||||||||| |  ||||||||||   |||||||||||||||||| ||| ||  |||||||||| |  |||||| |||    
T  8869 gaaatggtaaagccattttaaactcacacacacaagtgaaggtaccggggttcgaacctcggtcatgacatccggcctaacaatttcggcattttgccag 8968  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||  ||||||||||    
T  8969 ttgagctatgacttctggat 8988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 39323 - 39442
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  39323 gaaatggaaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 39422  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| ||||||||||    
T  39423 ttgagctaggacttctggat 39442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 12088 - 12002
Alignment:
Q  177 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 262  Q
    |||||||||||||||||||||||| |  |||||||||| | |||||||| ||||||||||||| || ||||| ||||| || |||||    
T  12088 aaagccattataaactcacacacacaagtgaaggtaccgaggttcgaacatcggtcatggcatccggtctaataatttcgacatttt 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 9494 - 9366
Alignment:
Q  161 agataggtgaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaa 258  Q
    |||||| |||||||| |||||||||||||| |||||||||| |  || ||| |||  | |||||||| |||||||||||| ||  |||||||||| |  |    
T  9494 agatagatgaaatggcaaagccattataaaactcacacacacaagtggaggcaccggggttcgaaccccggtcatggcatccggcctaacaatttcggca 9395  T
Q  259 ttttgtcagttgagttagaacttctggat 287  Q
    ||||| |||||||| ||| ||||||||||    
T  9394 ttttgccagttgagctaggacttctggat 9366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 463 - 344
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  || ||| |||    
T  463 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcatattgccag 364  T
Q  268 ttgagttagaacttctggat 287  Q
    ||||| ||| |||| |||||    
T  363 ttgagctaggacttttggat 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 6897 - 6782
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||||||||| |||||||| |||||||||||  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  6897 gaaatggtaaagctattataaattcacacacataagtggaggtaccggagttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 6798  T
Q  268 ttgagttagaacttct 283  Q
    ||||| ||| ||||||    
T  6797 ttgagctaggacttct 6782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 937 - 821
Alignment:
Q  169 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 266  Q
    ||||||| |||||||||||||| |||||||||| |  || ||| |||  | |||||||| |||||||||||| ||  |||||||||| || |||||| ||    
T  937 gaaatggcaaagccattataaaactcacacacacaagtggaggcaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgcca 838  T
Q  267 gttgagttagaacttct 283  Q
    |||||| ||| ||||||    
T  837 gttgagctaggacttct 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 2872 - 2768
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 267  Q
    ||||||||||||||||| |||||| |||||||||  || ||||| | | ||||||||| | |||||| |||  ||||||||||| | ||  |||||||||    
T  2872 gaaatggtaaagccattgtaaacttacacacataagtggaggtatcaaagttcgaaccccagtcatgacatctgatctaacaatctcgatgttttgtcag 2773  T
Q  268 ttgag 272  Q
    |||||    
T  2772 ttgag 2768  T

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Target: scaffold0684 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 2287 - 2194
Alignment:
Q  161 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 253  Q
    |||||| ||||||||  ||  ||||||||||||||||||| |  || |||||||| | ||  ||| ||||||||||||||||| ||||||||||    
T  2287 agatagatgaaatggagaattcattataaactcacacacacaagtggaggtaccaaggttaaaacttcggtcatggcattcgacctaacaattt 2194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 8216 - 8183
Alignment:
Q  169 gaaatggtaaagccattataaactcacacacata 202  Q
    ||||| ||||||||||||||||||||||||||||    
T  8216 gaaattgtaaagccattataaactcacacacata 8183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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