View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13526_high_5 (Length: 227)
Name: NF13526_high_5
Description: NF13526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13526_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 30364737 - 30364586
Alignment:
| Q |
7 |
cttttgttagttgattgcaaggtcaatcaattctaatcattccttatttacaaagaatactcta-----ataggtttcacttccattttattttatgctg |
101 |
Q |
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| T |
30364737 |
cttttgttagttgattgcaaggttaatcaattctaatcattccttatttacaaagaatactctagtctaataggtttcacttccattttattttatgctg |
30364638 |
T |
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| Q |
102 |
atgatctagttcttgcaggtagttacatcaacgaaaataatcaagtaaacac |
153 |
Q |
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| T |
30364637 |
atgatctagttattgcaggtagttacatcaacgaaaaaaatcaagtaaacac |
30364586 |
T |
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