View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1352_low_8 (Length: 325)

Name: NF1352_low_8
Description: NF1352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1352_low_8
NF1352_low_8
[»] chr3 (20 HSPs)
chr3 (23-296)||(26986151-26986424)
chr3 (35-117)||(1458539-1458620)
chr3 (70-137)||(37341241-37341307)
chr3 (93-147)||(29955116-29955170)
chr3 (93-147)||(30004270-30004324)
chr3 (71-128)||(11532491-11532548)
chr3 (87-160)||(29955032-29955105)
chr3 (87-160)||(30004186-30004259)
chr3 (36-74)||(44890438-44890476)
chr3 (36-147)||(799260-799373)
chr3 (88-145)||(3901508-3901565)
chr3 (24-83)||(37189235-37189295)
chr3 (88-147)||(3901566-3901625)
chr3 (33-82)||(3901585-3901635)
chr3 (36-74)||(19560730-19560768)
chr3 (24-74)||(31205357-31205407)
chr3 (24-74)||(35357305-35357355)
chr3 (22-82)||(32880983-32881044)
chr3 (43-135)||(55196241-55196334)
chr3 (87-175)||(1753295-1753383)
[»] chr6 (9 HSPs)
chr6 (36-179)||(1473590-1473735)
chr6 (45-121)||(28865443-28865520)
chr6 (39-90)||(24110066-24110118)
chr6 (24-82)||(1473603-1473662)
chr6 (24-74)||(4787818-4787868)
chr6 (24-74)||(17600706-17600756)
chr6 (85-121)||(3150242-3150278)
chr6 (87-127)||(11650916-11650956)
chr6 (107-175)||(12731533-12731601)
[»] chr4 (17 HSPs)
chr4 (35-121)||(34119639-34119726)
chr4 (24-90)||(21433861-21433928)
chr4 (24-128)||(993243-993348)
chr4 (80-176)||(21433938-21434034)
chr4 (24-82)||(21433965-21434024)
chr4 (72-147)||(31758694-31758769)
chr4 (47-90)||(41840676-41840720)
chr4 (24-82)||(32286323-32286382)
chr4 (96-151)||(51578007-51578062)
chr4 (87-145)||(3688579-3688637)
chr4 (94-159)||(16577330-16577395)
chr4 (32-91)||(2247576-2247636)
chr4 (87-147)||(2324765-2324825)
chr4 (32-83)||(7403174-7403226)
chr4 (80-128)||(17181284-17181332)
chr4 (24-90)||(31758677-31758742)
chr4 (35-82)||(33414002-33414050)
[»] chr7 (12 HSPs)
chr7 (43-128)||(29356943-29357029)
chr7 (87-127)||(40134458-40134498)
chr7 (85-128)||(24516582-24516625)
chr7 (24-85)||(3235547-3235609)
chr7 (24-74)||(22026090-22026140)
chr7 (87-145)||(47497772-47497830)
chr7 (84-145)||(7017155-7017216)
chr7 (84-145)||(7032513-7032574)
chr7 (80-125)||(11201322-11201367)
chr7 (93-145)||(640957-641009)
chr7 (35-82)||(2276276-2276324)
chr7 (80-120)||(45200484-45200524)
[»] chr8 (12 HSPs)
chr8 (87-147)||(40694685-40694745)
chr8 (24-74)||(40694601-40694651)
chr8 (87-133)||(40696209-40696255)
chr8 (24-84)||(40566546-40566607)
chr8 (24-90)||(17893305-17893372)
chr8 (36-82)||(34504377-34504424)
chr8 (105-160)||(43042228-43042283)
chr8 (87-129)||(26018532-26018574)
chr8 (87-121)||(40175966-40176000)
chr8 (39-179)||(40566479-40566620)
chr8 (24-83)||(20271104-20271164)
chr8 (24-83)||(21057732-21057792)
[»] chr2 (18 HSPs)
chr2 (91-147)||(45300443-45300499)
chr2 (24-90)||(12779490-12779556)
chr2 (36-90)||(25666798-25666853)
chr2 (24-89)||(12703460-12703526)
chr2 (87-128)||(4237322-4237363)
chr2 (87-128)||(44247564-44247605)
chr2 (27-82)||(1469730-1469786)
chr2 (93-145)||(12779511-12779562)
chr2 (24-82)||(42094294-42094353)
chr2 (87-145)||(1930679-1930737)
chr2 (32-74)||(15194531-15194573)
chr2 (41-90)||(18719736-18719786)
chr2 (87-145)||(18719740-18719798)
chr2 (24-66)||(25666907-25666949)
chr2 (87-147)||(2683448-2683508)
chr2 (72-128)||(3466444-3466500)
chr2 (24-83)||(9430228-9430288)
chr2 (92-128)||(37810223-37810259)
[»] scaffold0003 (1 HSPs)
scaffold0003 (27-74)||(136422-136469)
[»] chr5 (7 HSPs)
chr5 (87-137)||(3907726-3907776)
chr5 (93-175)||(33029473-33029555)
chr5 (27-90)||(25545211-25545273)
chr5 (24-128)||(35244866-35244971)
chr5 (45-89)||(42420102-42420147)
chr5 (80-128)||(38029566-38029614)
chr5 (32-90)||(41169474-41169533)
[»] chr1 (11 HSPs)
chr1 (32-74)||(2542698-2542740)
chr1 (94-171)||(21281460-21281538)
chr1 (24-81)||(38663639-38663697)
chr1 (22-74)||(31970106-31970158)
chr1 (35-82)||(49822620-49822668)
chr1 (24-82)||(34437689-34437748)
chr1 (87-137)||(2542774-2542824)
chr1 (93-147)||(40669007-40669061)
chr1 (33-74)||(31851960-31852001)
chr1 (87-128)||(34437624-34437665)
chr1 (91-147)||(34437673-34437729)
[»] scaffold0015 (1 HSPs)
scaffold0015 (93-159)||(200953-201019)
[»] scaffold0137 (1 HSPs)
scaffold0137 (87-147)||(8252-8312)


Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 23 - 296
Target Start/End: Complemental strand, 26986424 - 26986151
Alignment:
Q  23 gaacacactttttaacatacatttttcaacacactctatttgattggttaaattcacatgagatccacataatttggtggaacccatgtgaattttaact 122  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||| ||| |||||||| | | |||||||||||||||||||    
T  26986424 gaacacactttttaatatacatttttcaacacactctctttgattaattaaattcacatgagacccatataatttgataggacccatgtgaattttaact 26986325  T
Q  123 aatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacattcttcgttaggagatagcatatcatatcatggcatgattcatatggaa 222  Q
    ||||||| ||||||| ||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26986324 aatcaaggagaatgtgttgaaaagtatatgttaaaatatgtgttgctaacattcttcgctaggagatagcatatcatatcatggcatgattcatatggaa 26986225  T
Q  223 agcacaagatcaggcaaggatccttgaaccctagcccaaggagtactcctccaaagcctaccctcatttccatc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26986224 agcacaagatcaggcaaggatccttgaaccctagcccaaggagtactcctccaaagcctaccctcatttccatc 26986151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 1458539 - 1458620
Alignment:
Q  35 taacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccacataatttggtggaacccatgtgaattt 117  Q
    ||||| ||| |||||||||||||||  |||||||||| ||||||| |||||| |||||| |||||||||||||||||| |||||    
T  1458539 taacacacaattttcaacacactct--ttgattggttgaaattcatatgagacccacatgatttggtggaacccatgtaaattt 1458620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 37341307 - 37341241
Alignment:
Q  70 ttaaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgt 137  Q
    ||||||| | |||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  37341307 ttaaatttatatgagacccacatgatttggtgga-cccatgtgaattttaactaatcaaaaagaatgt 37341241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 29955116 - 29955170
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  29955116 aatttgatggatcccatatgaattttaactaatcaagaagagtgtattgaaaagt 29955170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 30004270 - 30004324
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  30004270 aatttgatggatcccatatgaattttaactaatcaagaagagtgtattgaaaagt 30004324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 11532491 - 11532548
Alignment:
Q  71 taaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    |||||| | ||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  11532491 taaatttatatgggatccacatgatttggtggaacccatgtgaattttaaccaatcaa 11532548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 29955105 - 29955032
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaata 160  Q
    |||||| ||||| ||| |||||||||||||||||| |||||| || | ||| ||||||||||| ||||||||||    
T  29955105 ccacatgatttgatgggacccatgtgaattttaaccaatcaaaaaaagtgtgttgaaaagtatgtattaaaata 29955032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 30004259 - 30004186
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaata 160  Q
    |||||| ||||| ||| |||||||||||||||||| |||||| || | ||| ||||||||||| ||||||||||    
T  30004259 ccacatgatttgatgggacccatgtgaattttaaccaatcaaaaaaagtgtgttgaaaagtatgtattaaaata 30004186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 44890476 - 44890438
Alignment:
Q  36 aacatacatttttcaacacactctatttgattggttaaa 74  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44890476 aacatacatttttcaacacactctttttgattggttaaa 44890438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 799260 - 799373
Alignment:
Q  36 aacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccacataattt-ggtggaacccatgtgaattttaactaatcaagaaga 133  Q
    |||| |||||||||||||| |||| ||| ||||||| ||||||||||| |  ||| |||| || ||||| ||| |||| ||||||||| ||||||  |||    
T  799260 aacacacatttttcaacacgctctctttaattggtttaaattcacatgggtcccatataaattaggtgggacctatgtcaattttaaccaatcaaagaga 799359  T
Q  134 atgtattgaaaagt 147  Q
    | ||||||||||||    
T  799360 aagtattgaaaagt 799373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 3901565 - 3901508
Alignment:
Q  88 cacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    ||||| ||||||||| |||||||||||||||||| ||||||  ||||||| |||||||    
T  3901565 cacatgatttggtgggacccatgtgaattttaaccaatcaaagagaatgtgttgaaaa 3901508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 37189295 - 37189235
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 83  Q
    ||||||| |||||| |||||||||| |||| ||||| ||||||||||| ||||||||||||    
T  37189295 aacacacattttaatatacattttttaacagactctctttgattggttaaaattcacatga 37189235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 3901566 - 3901625
Alignment:
Q  88 cacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    ||||| ||||||||| |||||||||||||||||| ||||||  ||| ||| |||||||||    
T  3901566 cacatgatttggtgggacccatgtgaattttaaccaatcaaagagagtgtgttgaaaagt 3901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 3901635 - 3901585
Alignment:
Q  33 tttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  3901635 tttaacacacacttttcaacacactctctttgattggttaaaattcacatg 3901585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 19560768 - 19560730
Alignment:
Q  36 aacatacatttttcaacacactctatttgattggttaaa 74  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  19560768 aacacacatttttcaacacactctctttgattggttaaa 19560730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 31205357 - 31205407
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||| |||||||| | ||||| ||||||||||| ||||||||||||||    
T  31205357 aacacacgttttaacacatattttccaacacactctctttgattggttaaa 31205407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 35357305 - 35357355
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||| || ||||| | ||||||||||||||||| ||||||||||||||    
T  35357305 aacacacattctaacaaatatttttcaacacactctctttgattggttaaa 35357355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 32880983 - 32881044
Alignment:
Q  22 agaacacactttttaacatacatttttcaacacactctatttgattggttaa-attcacatg 82  Q
    ||||||||| ||||| || ||||||||||||| |||||  |||||||||||| |||||||||    
T  32880983 agaacacacattttatcacacatttttcaacatactctccttgattggttaatattcacatg 32881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 55196241 - 55196334
Alignment:
Q  43 atttttcaacacactctatttgattggtt-aaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaat 135  Q
    ||||||||||||| ||| ||| |||| || ||||||| ||||||| ||||||||||  ||||| | || |||||||||| |||| || ||||||    
T  55196241 atttttcaacacattctttttaattgattaaaattcatatgagattcacataatttaatggaatctatatgaattttaattaataaaaaagaat 55196334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 1753383 - 1753295
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacatt 175  Q
    |||||| ||||| || ||| ||||| ||||||||| |||||| |||| | ||||||||||| ||| ||||| || |  |||||||||||    
T  1753383 ccacatgatttgatgaaactcatgtaaattttaaccaatcaaaaagagtatattgaaaagtgtatgttaaagtacgtattgctaacatt 1753295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 1473735 - 1473590
Alignment:
Q  36 aacatacatttttcaacacactctatttgattggttaaa--ttcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaaga 133  Q
    |||| ||| ||||||||| ||||| |||||||| |||||  |||||||| || |||||| |||||||||||||||||||||||||||| ||||||  | |    
T  1473735 aacacacacttttcaacatactctctttgattgtttaaaaattcacatgggacccacatgatttggtggaacccatgtgaattttaaccaatcaaagata 1473636  T
Q  134 atgtattgaaaagtatatattaaaataagggttgctaacattcttc 179  Q
     ||| ||||||| | | |||||||||  | ||||||| ||||||||    
T  1473635 gtgtgttgaaaaatgtgtattaaaatgtgtgttgctagcattcttc 1473590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 28865520 - 28865443
Alignment:
Q  45 ttttcaacacactctatttgattggttaaat-tcacatgagatccacataatttggtggaacccatgtgaattttaac 121  Q
    |||||||||| |||| ||||||||||||||  ||||||| || |||||| | ||||||| ||||||||||||||||||    
T  28865520 ttttcaacacgctctctttgattggttaaaactcacatgggacccacatgaattggtgggacccatgtgaattttaac 28865443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 24110066 - 24110118
Alignment:
Q  39 atacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||    
T  24110066 atacatttttcaacacactctctttgattggttaaaattcatatgtgatccac 24110118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 1473603 - 1473662
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||||| |||||| | ||||||||||||||||| | ||||||||||| |||||||||||    
T  1473603 aacacacattttaatacacatttttcaacacactatctttgattggttaaaattcacatg 1473662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 4787868 - 4787818
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||| ||||||||||||||||| ||||  |||| ||||||||||||||    
T  4787868 aacacacattttaacatacattttttaacagtctctctttgattggttaaa 4787818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 17600756 - 17600706
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||| |||||||| ||||||||||||| | ||| ||||||||||||||    
T  17600756 aacacacattttaacaaacatttttcaacatattctctttgattggttaaa 17600706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 3150278 - 3150242
Alignment:
Q  85 atccacataatttggtggaacccatgtgaattttaac 121  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  3150278 atccacatgatttggtgggacccatgtgaattttaac 3150242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 11650956 - 11650916
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatca 127  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  11650956 ccacataatttggtgggatccatgtgaattttaaccaatca 11650916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 12731601 - 12731533
Alignment:
Q  107 catgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacatt 175  Q
    ||||||||||||||| ||||||  ||||||| |||| |||| | ||||| |||| | ||||||||||||    
T  12731601 catgtgaattttaaccaatcaaagagaatgtgttgagaagtgtgtattagaatatgtgttgctaacatt 12731533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 34119639 - 34119726
Alignment:
Q  35 taacatacatttttcaacacactctatttgattggttaaa-ttcacatgagatccacataatttggtggaacccatgtgaattttaac 121  Q
    ||||| ||||||||||||||||||  |||||| ||||||| |||||||||||||||||| |||| || | ||||||||||||||||||    
T  34119639 taacacacatttttcaacacactcgttttgatcggttaaaattcacatgagatccacatgatttagtaggacccatgtgaattttaac 34119726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 21433861 - 21433928
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  21433861 aacacacattttaacacacatttttcaacacactctctttgattggttaaaattcacatgagacccac 21433928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 993348 - 993243
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtta-aattcacatgagatccacataatttggtggaacccatgtgaattttaact 122  Q
    ||||||| | |||||| ||| ||| ||||| ||||| ||||||| |||| |||||||||| || |||||| ||||||||| || |||||||||||||||     
T  993348 aacacacatcttaacacacactttccaacaaactctctttgatttgttagaattcacatgggacccacatgatttggtgggactcatgtgaattttaacc 993249  T
Q  123 aatcaa 128  Q
    ||||||    
T  993248 aatcaa 993243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 21433938 - 21434034
Alignment:
Q  80 atgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacattc 176  Q
    |||||| |||||| ||||||||| | |||||||||||||||| ||||||  ||| ||| ||||||||| ||| |||||||  | ||||||| |||||    
T  21433938 atgagacccacatgatttggtgggatccatgtgaattttaaccaatcaatgagagtgtgttgaaaagtgtatgttaaaatgtgtgttgctaccattc 21434034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 21434024 - 21433965
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||||| |||||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  21434024 aacacacattttaacatacacttttcaacacactctcattgattggttaaaattcacatg 21433965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 31758769 - 31758694
Alignment:
Q  72 aaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    ||||| |||||||| |||||| |||||||||| |  |||||||||||||| ||||||  ||||||| |||||||||    
T  31758769 aaatttacatgagacccacatgatttggtggagcttatgtgaattttaaccaatcaaatagaatgtgttgaaaagt 31758694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 41840720 - 41840676
Alignment:
Q  47 ttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  41840720 ttcaacacactctatttgattggttaaaattcacatgagttccac 41840676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 32286382 - 32286323
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||||| ||| |||||| ||||||||||||||||| ||| ||||||| |||||||||||    
T  32286382 aacacacgtttcaacatatatttttcaacacactcttttttattggttaaaattcacatg 32286323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 51578062 - 51578007
Alignment:
Q  96 ttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatat 151  Q
    ||||||| |||||||||||||||||| |||||| | |||||| |||| ||||||||    
T  51578062 ttggtgggacccatgtgaattttaacaaatcaaaatgaatgtgttgataagtatat 51578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 3688637 - 3688579
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    |||||| ||||||||  |||||||||||||||||||||||||  | ||||| |||||||    
T  3688637 ccacatgatttggtgagacccatgtgaattttaactaatcaaagaaaatgtgttgaaaa 3688579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 16577330 - 16577395
Alignment:
Q  94 atttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaat 159  Q
    ||||| |||||||||||||| ||||||| ||||||  ||||| |||| |||||| ||| |||||||    
T  16577330 atttgttggaacccatgtgagttttaaccaatcaaatagaatatattaaaaagtgtatgttaaaat 16577395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 2247576 - 2247636
Alignment:
Q  32 ttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccaca 91  Q
    |||||||| ||| ||||||||||||||| ||| |||| || ||||||||| ||||||||||    
T  2247576 ttttaacacacacttttcaacacactctctttaattgattaaaattcacacgagatccaca 2247636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 2324825 - 2324765
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||  ||| | |||||||||||    
T  2324825 ccacatgatttggtgaaactcatgtgaattttaaccaatcaaagagagtatattgaaaagt 2324765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 7403226 - 7403174
Alignment:
Q  32 ttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 83  Q
    |||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||    
T  7403226 ttttaacacacactattcaacacactctctttgattggttaaaattcacatga 7403174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 17181284 - 17181332
Alignment:
Q  80 atgagatccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    |||||| |||| | ||||||||| ||| |||||||||||||||||||||    
T  17181284 atgagacccacgtgatttggtgggacctatgtgaattttaactaatcaa 17181332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 31758677 - 31758742
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||| |||||||| ||  ||||||||||| ||||||||||||||| |||||||||| || |||||    
T  31758677 aacacacattttaacacac--ttttcaacacattctatttgattggttaaaattcacataagctccac 31758742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 33414002 - 33414050
Alignment:
Q  35 taacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  33414002 taacacacacttttcaacacactctctttgattggttaaaattcacatg 33414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 29357029 - 29356943
Alignment:
Q  43 atttttcaacacactctatttgattggttaaa-ttcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    ||||||||||||||||  ||||||| |||||| |||| ||| ||||||| | | |||||||||||||||||||||||||| ||||||    
T  29357029 atttttcaacacactcggtttgatttgttaaaattcatatgggatccacgtgaattggtggaacccatgtgaattttaaccaatcaa 29356943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 40134458 - 40134498
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatca 127  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  40134458 ccacataatttggtgggacccatgtgaattttaaccaatca 40134498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 24516625 - 24516582
Alignment:
Q  85 atccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||    
T  24516625 atccacatgatttggtgggacccatgtgaattttaaccaatcaa 24516582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 3235547 - 3235609
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgaga 85  Q
    ||||||| |||||||| ||| ||| ||| ||||||| ||||||||||| ||||||||||||||    
T  3235547 aacacacattttaacacacactttccaatacactctctttgattggttaaaattcacatgaga 3235609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 22026140 - 22026090
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||| |||||||| |||||||||||||  ||||||||||| |||||||    
T  22026140 aacacacgttttaacacacatttttcaacatgctctatttgataggttaaa 22026090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 47497772 - 47497830
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    |||||||||||||||| || ||||||||||||||| ||||||  | ||| |||||||||    
T  47497772 ccacataatttggtgggactcatgtgaattttaaccaatcaaagaaaatatattgaaaa 47497830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 7017155 - 7017216
Alignment:
Q  84 gatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    ||||||||||||||||| | ||  |||||||||||||| ||||||  ||| |||||||||||    
T  7017155 gatccacataatttggtaggacttatgtgaattttaaccaatcaaagagagtgtattgaaaa 7017216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 7032513 - 7032574
Alignment:
Q  84 gatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    ||||||||||||||||| | ||  |||||||||||||| ||||||  ||| |||||||||||    
T  7032513 gatccacataatttggtaggacttatgtgaattttaaccaatcaaagagagtgtattgaaaa 7032574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 11201367 - 11201322
Alignment:
Q  80 atgagatccacataatttggtggaacccatgtgaattttaactaat 125  Q
    |||||| |||| | ||||||||| ||||||||||||||||||||||    
T  11201367 atgagacccacgtgatttggtgggacccatgtgaattttaactaat 11201322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 640957 - 641009
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    |||||||| || | ||||||||||||||| |||||| ||||||||||| ||||    
T  640957 aatttggtagatctcatgtgaattttaacgaatcaaaaagaatgtattaaaaa 641009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 2276276 - 2276324
Alignment:
Q  35 taacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  2276276 taacacacacttttcaacacactctctttgattggttaaaattcacatg 2276324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 45200524 - 45200484
Alignment:
Q  80 atgagatccacataatttggtggaacccatgtgaattttaa 120  Q
    ||||||||||||| |||||||||||||||| | ||||||||    
T  45200524 atgagatccacatgatttggtggaacccatataaattttaa 45200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 40694685 - 40694745
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||| ||||||||| |||||||||||||||||||||| || |||| |||||||||||||    
T  40694685 ccacatgatttggtgggacccatgtgaattttaactaataaaaaagagtgtattgaaaagt 40694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 40694601 - 40694651
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||| |||||||| ||||||| ||||||| ||||||||||||||||||    
T  40694601 aacacacgttttaacacacattttacaacacaatctatttgattggttaaa 40694651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 40696255 - 40696209
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaaga 133  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  40696255 ccacatgatttggtgggacccatgtgaattttaactaatcaaaaaga 40696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 40566607 - 40566546
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgag 84  Q
    ||||||| |||||||| | |||||||||||| |||| ||||||||||| |||||||||||||    
T  40566607 aacacacattttaacacatatttttcaacacgctctttttgattggttaaaattcacatgag 40566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 17893305 - 17893372
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||| ||||||||||||||||| |||| ||||| ||||||| ||| ||| ||||||||| |||||    
T  17893305 aacacacattttaacatacattttttaacagactctctttgattagttaaaactcacatgagttccac 17893372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 34504377 - 34504424
Alignment:
Q  36 aacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  34504377 aacatatatttttcaacacactctttttgattggttaaaattcacatg 34504424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 43042228 - 43042283
Alignment:
Q  105 cccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaata 160  Q
    ||||| ||||||||||| |||||| |||| ||||||||||||||||  ||||||||    
T  43042228 cccatatgaattttaaccaatcaaaaagagtgtattgaaaagtatacgttaaaata 43042283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 26018532 - 26018574
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaag 129  Q
    |||||||||||| ||| |||||||||||||||||| |||||||    
T  26018532 ccacataatttgatgggacccatgtgaattttaaccaatcaag 26018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 40175966 - 40176000
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaac 121  Q
    |||||||||||||||| ||||||||||||||||||    
T  40175966 ccacataatttggtgggacccatgtgaattttaac 40176000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 40566479 - 40566620
Alignment:
Q  39 atacatttttcaacacactctatttgattggttaaa-ttcacatgagatccac-ataatttggtggaacccatgtgaattttaactaatcaagaagaatg 136  Q
    ||||||||||||||||| | | ||| ||| |||||| || ||||| ||||| | || ||||||||  || ||||||||||||||| |||||| ||||  |    
T  40566479 atacatttttcaacacatttttttttattcgttaaaatttacatg-gatcctccatgatttggtgagactcatgtgaattttaaccaatcaaaaagagcg 40566577  T
Q  137 tattgaaaagtatatattaaaataagggttgctaacattcttc 179  Q
    | ||||||| ||| | |||||||  | ||||||||||||||||    
T  40566578 tgttgaaaaatatgtgttaaaatgtgtgttgctaacattcttc 40566620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 20271164 - 20271104
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 83  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||| ||| ||||||||||||    
T  20271164 aacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatga 20271104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 21057792 - 21057732
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 83  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||| ||| ||||||||||||    
T  21057792 aacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatga 21057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 45300443 - 45300499
Alignment:
Q  91 ataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||||| ||||| |||||||||||||||| |||||| |||| |||||||||||||    
T  45300443 ataatttgatggaatccatgtgaattttaaccaatcaaaaagagtgtattgaaaagt 45300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 12779490 - 12779556
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||| || ||||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||    
T  12779490 aacacaccttctaacatacatttttcaacacattct-tttgattggttaaaattcacatgggatccac 12779556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 25666798 - 25666853
Alignment:
Q  36 aacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    |||| |||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  25666798 aacacacatttttcaacacactctatttgattgattaaaattcacatgagacccac 25666853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 12703460 - 12703526
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggttaa-attcacatgagatcca 89  Q
    ||||||| |||||||| ||||||||||| ||||| | ||||||||||||| ||||||||||| ||||    
T  12703460 aacacacattttaacacacatttttcaatacactttctttgattggttaatattcacatgagttcca 12703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 4237322 - 4237363
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  4237322 ccacatgatttggtggtacccatgtgaattttaactaatcaa 4237363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 44247605 - 44247564
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  44247605 ccacataatttggtggaacccatgtgaatttcaaccaatcaa 44247564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 1469730 - 1469786
Alignment:
Q  27 acactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||| |||||||||||    
T  1469730 acacattttaacacatatttttcaacacactctatttaattggttaaaattcacatg 1469786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 12779562 - 12779511
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||| |||||||    
T  12779562 aatttggtggatcccatgtgaattttaaccaatcaa-aagaatgtgttgaaaa 12779511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 42094353 - 42094294
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||||| |||||||| ||| |||||||||||| || ||||||||||| |||||||||||    
T  42094353 aacacacattttaacacacacttttcaacacacactctttgattggttaaaattcacatg 42094294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 1930737 - 1930679
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    |||||||||||| ||||||  |||||||||||||| |||||| |||| ||| |||||||    
T  1930737 ccacataatttgatggaacatatgtgaattttaaccaatcaaaaagagtgtcttgaaaa 1930679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 15194531 - 15194573
Alignment:
Q  32 ttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    |||||||||||| |||||| |||||||| ||||||||||||||    
T  15194531 ttttaacatacacttttcagcacactctttttgattggttaaa 15194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 18719736 - 18719786
Alignment:
Q  41 acatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  18719736 acatttttcaacacactctttttgattggttaaaattcacacgagttccac 18719786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 18719798 - 18719740
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 145  Q
    |||||| |||||||||||| | ||||||||||||| |||||| |||| ||| |||||||    
T  18719798 ccacatgatttggtggaactcgtgtgaattttaaccaatcaaaaagagtgtgttgaaaa 18719740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 25666949 - 25666907
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgat 66  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||    
T  25666949 aacacacattttaacatacaattttcaacacactctctttgat 25666907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 2683448 - 2683508
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||| |||||||||||||||| | ||||||||| |||||| |||| |||  ||||||||    
T  2683448 ccacatgatttggtggaacccatataaattttaaccaatcaaaaagagtgtcgtgaaaagt 2683508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 3466444 - 3466500
Alignment:
Q  72 aaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    ||||||| ||| || |||||  |||| ||||||||||||||||||||||| ||||||    
T  3466444 aaattcatatgggacccacacgatttagtggaacccatgtgaattttaaccaatcaa 3466500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 9430288 - 9430228
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 83  Q
    ||||||| || ||||| ||| ||||||||| | ||||||||||||||| ||||||||||||    
T  9430288 aacacacattctaacacacacttttcaacatattctatttgattggttaaaattcacatga 9430228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 37810223 - 37810259
Alignment:
Q  92 taatttggtggaacccatgtgaattttaactaatcaa 128  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  37810223 taatttggtgggacccatgtgaattttaaccaatcaa 37810259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 136469 - 136422
Alignment:
Q  27 acactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  136469 acacattttaacacacatttttcaacacactctttttgattggttaaa 136422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 3907726 - 3907776
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgt 137  Q
    |||||| ||||||||| |||||||||||||||||| |||||| ||||||||    
T  3907726 ccacatgatttggtgggacccatgtgaattttaaccaatcaaaaagaatgt 3907776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 33029555 - 33029473
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacatt 175  Q
    |||||||||| ||  || ||||||||||||||| ||  ||||||| ||||||||||||| |||||||| | ||||||| ||||    
T  33029555 aatttggtgggacttatatgaattttaactaattaaagagaatgtgttgaaaagtatatgttaaaatatgtgttgctagcatt 33029473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 25545211 - 25545273
Alignment:
Q  27 acactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    |||| |||||||| ||||||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  25545211 acacattttaacacacatttttcaacacactc--tttgattggttaaaattcacatgagacccac 25545273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 35244971 - 35244866
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccacataatttggtggaacccatgtgaattttaact 122  Q
    ||||||| |||||||||||| || |||||||||| | ||||||||||| ||||||| | | |   ||||| || |||||| | ||||||||||||||||     
T  35244971 aacacacattttaacatacacttgtcaacacactttctttgattggttgaaattcataggggtcacacatgatatggtgggatccatgtgaattttaacc 35244872  T
Q  123 aatcaa 128  Q
    ||||||    
T  35244871 aatcaa 35244866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 42420147 - 42420102
Alignment:
Q  45 ttttcaacacactctatttgattggtt-aaattcacatgagatcca 89  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  42420147 ttttcaacacactctatttgattggttaaaactcacatgagatcca 42420102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 38029614 - 38029566
Alignment:
Q  80 atgagatccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    ||||||||||||| ||||||||  |||||||||||||||||| ||||||    
T  38029614 atgagatccacatgatttggtgagacccatgtgaattttaaccaatcaa 38029566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 41169533 - 41169474
Alignment:
Q  32 ttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 90  Q
    |||||||| ||||||||||||||||||| ||||||  ||| ||||||||||| |||||||    
T  41169533 ttttaacacacatttttcaacacactctctttgatccgttaaaattcacatgtgatccac 41169474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 2542698 - 2542740
Alignment:
Q  32 ttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  2542698 ttttaacacacatttttcaacacactctctttgattggttaaa 2542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 21281538 - 21281460
Alignment:
Q  94 atttggtggaacccatgtgaattttaactaatc-aagaagaatgtattgaaaagtatatattaaaataagggttgctaa 171  Q
    ||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||| ||| |||||||| | ||||||||    
T  21281538 atttggtgggacctatgtgaattttaaccaatcaaaaaagaatgtgttgaaaagtgtatgttaaaatatgtgttgctaa 21281460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 38663639 - 38663697
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtta-aattcacat 81  Q
    ||||||| |||||||| | ||||||||||||||||| |||||||||||| |||||||||    
T  38663639 aacacacattttaacacatatttttcaacacactctctttgattggttacaattcacat 38663697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 31970106 - 31970158
Alignment:
Q  22 agaacacactttttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||||||  || ||||| ||||||||||||||||||| ||||||||||||||    
T  31970106 agaacacaagttctaacacacatttttcaacacactctttttgattggttaaa 31970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 49822668 - 49822620
Alignment:
Q  35 taacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  49822668 taacacacatttttcaacacactctctttgattggttaaaattcacatg 49822620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 34437748 - 34437689
Alignment:
Q  24 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 82  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||||||| |||||||||||    
T  34437748 aacacacattttaacacgcacttttcaacacactctctttgattggttaaaattcacatg 34437689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 2542774 - 2542824
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgt 137  Q
    |||||| ||||||||||| |||||||||||||||| ||||||  |||||||    
T  2542774 ccacatgatttggtggaagccatgtgaattttaaccaatcaaagagaatgt 2542824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 40669007 - 40669061
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    ||||||||||||||| ||||||||||||| ||||||  ||| ||| |||||||||    
T  40669007 aatttggtggaacccgtgtgaattttaaccaatcaaagagagtgtgttgaaaagt 40669061  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 31852001 - 31851960
Alignment:
Q  33 tttaacatacatttttcaacacactctatttgattggttaaa 74  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||    
T  31852001 tttaatatacatttttcaacacactctctttgatttgttaaa 31851960  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 34437665 - 34437624
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaa 128  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  34437665 ccacatgatttggtgggacccatgtgaattttaaccaatcaa 34437624  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 34437673 - 34437729
Alignment:
Q  91 ataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    ||||||||| || |||||||||||||||||| ||||||  ||| ||| |||||||||    
T  34437673 ataatttggggggacccatgtgaattttaaccaatcaaagagagtgtgttgaaaagt 34437729  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 201019 - 200953
Alignment:
Q  93 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaat 159  Q
    ||||||||||  || |||||||||||||| ||| ||||||||||| ||||||| ||| | |||||||    
T  201019 aatttggtgggtccaatgtgaattttaaccaattaagaagaatgtgttgaaaaatatgtgttaaaat 200953  T

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Target: scaffold0137 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 8252 - 8312
Alignment:
Q  87 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 147  Q
    |||||||||||||||| |  ||||||||||||| | |||||| |||||||  |||||||||    
T  8252 ccacataatttggtgggattcatgtgaattttagccaatcaaaaagaatgcgttgaaaagt 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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