View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13535_high_6 (Length: 304)
Name: NF13535_high_6
Description: NF13535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13535_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 176009 - 175719
Alignment:
| Q |
1 |
ttgagttttgtaaatttcattttgaaatattccacgagatatatagctagaaacagcaactaccttgtaagtatgggtaaattgagcgtcatacccaatg |
100 |
Q |
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| T |
176009 |
ttgagttttgtaaacatcattttgaa---ttccacgagatatatagctagaaacagcaactaccttgtaagtatgggtaaattgagcgtcatacccaatg |
175913 |
T |
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| Q |
101 |
gtgtatgcaatttgtagacttttctcgaaatccaaagagggcaatatattgaatttggtggtacaagggttccatagtagcggatcaccacagtcgaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
175912 |
gtgtatgcaatttgtagacttttctcgaaatccaaagagggcaatatattgaatttggtggtacaagggttccatagtagcggatcaccacagtcgaatc |
175813 |
T |
|
| Q |
201 |
tgtcatcgatgg-ttgaagacagatgatgccatcgcaagagtcagctatgatagcacgaatgttagaaggatttagaggaaagttgagcttcat |
293 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
175812 |
tgtcatcgatggtttgaagacagatgatgccatcgcaagagtcagctatgatagcacgaatgttagaaggatttagaggaaagttgagcttcat |
175719 |
T |
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