View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13535_low_5 (Length: 324)

Name: NF13535_low_5
Description: NF13535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13535_low_5
NF13535_low_5
[»] chr3 (36 HSPs)
chr3 (97-311)||(48626348-48626561)
chr3 (1-69)||(20698443-20698511)
chr3 (1-47)||(42386455-42386501)
chr3 (1-69)||(13442319-13442387)
chr3 (1-69)||(17487901-17487969)
chr3 (1-69)||(17499383-17499451)
chr3 (1-47)||(12399254-12399300)
chr3 (1-47)||(14972899-14972945)
chr3 (1-47)||(18438579-18438625)
chr3 (1-47)||(26686932-26686978)
chr3 (1-47)||(11424790-11424835)
chr3 (1-47)||(23083391-23083437)
chr3 (1-47)||(43840977-43841023)
chr3 (57-100)||(48626572-48626615)
chr3 (1-47)||(9707682-9707727)
chr3 (1-47)||(14572634-14572679)
chr3 (1-47)||(17672668-17672713)
chr3 (5-47)||(25476415-25476457)
chr3 (1-47)||(29172658-29172703)
chr3 (1-47)||(6469209-6469254)
chr3 (1-47)||(7781422-7781467)
chr3 (1-47)||(8899136-8899181)
chr3 (1-47)||(12119800-12119845)
chr3 (1-47)||(13151865-13151910)
chr3 (1-47)||(13154330-13154375)
chr3 (1-47)||(14576863-14576908)
chr3 (1-47)||(16282886-16282931)
chr3 (1-47)||(16454356-16454401)
chr3 (1-47)||(17446730-17446775)
chr3 (1-47)||(17463220-17463265)
chr3 (1-47)||(28848686-28848731)
chr3 (1-47)||(34159368-34159413)
chr3 (1-47)||(38961966-38962011)
chr3 (1-47)||(45606982-45607027)
chr3 (1-47)||(55476533-55476578)
chr3 (1-47)||(55500984-55501029)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-69)||(4757-4825)
scaffold0358 (21-69)||(1-49)
[»] chr4 (27 HSPs)
chr4 (1-66)||(23374370-23374435)
chr4 (1-69)||(7088922-7088990)
chr4 (1-69)||(7798819-7798887)
chr4 (1-69)||(12902802-12902870)
chr4 (1-69)||(44052874-44052942)
chr4 (1-47)||(52873397-52873443)
chr4 (1-47)||(7893748-7893794)
chr4 (1-42)||(3096338-3096379)
chr4 (1-69)||(22636480-22636548)
chr4 (1-47)||(44928954-44929000)
chr4 (2-47)||(54798784-54798829)
chr4 (1-47)||(16377553-16377597)
chr4 (1-47)||(16270266-16270311)
chr4 (1-47)||(18215349-18215394)
chr4 (1-47)||(12382-12427)
chr4 (1-47)||(1837584-1837629)
chr4 (1-47)||(14038693-14038739)
chr4 (1-47)||(14280358-14280403)
chr4 (1-47)||(15118427-15118472)
chr4 (1-47)||(15355400-15355445)
chr4 (1-47)||(16240000-16240045)
chr4 (1-47)||(19618247-19618292)
chr4 (1-47)||(23803340-23803385)
chr4 (1-47)||(44773162-44773207)
chr4 (1-47)||(51463943-51463988)
chr4 (1-47)||(52312552-52312597)
chr4 (1-33)||(6899936-6899968)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-69)||(13256-13324)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-69)||(24310-24379)
[»] chr8 (22 HSPs)
chr8 (1-66)||(21919011-21919076)
chr8 (1-69)||(20536253-20536321)
chr8 (1-47)||(7372823-7372869)
chr8 (1-47)||(18818439-18818485)
chr8 (1-47)||(16092372-16092418)
chr8 (1-47)||(23406424-23406470)
chr8 (1-47)||(6759303-6759349)
chr8 (1-47)||(28649074-28649120)
chr8 (1-45)||(21923960-21924004)
chr8 (1-69)||(31971302-31971369)
chr8 (1-36)||(18879272-18879307)
chr8 (1-47)||(14409519-14409564)
chr8 (1-47)||(16413391-16413436)
chr8 (1-47)||(22626781-22626826)
chr8 (1-47)||(45131028-45131072)
chr8 (1-47)||(1484444-1484489)
chr8 (1-47)||(5853367-5853412)
chr8 (1-47)||(15203306-15203351)
chr8 (1-47)||(20403269-20403314)
chr8 (1-47)||(22001795-22001840)
chr8 (2-47)||(4483323-4483367)
chr8 (2-47)||(41598231-41598275)
[»] chr6 (24 HSPs)
chr6 (1-69)||(20360968-20361036)
chr6 (1-66)||(16496289-16496354)
chr6 (1-47)||(29060585-29060631)
chr6 (1-69)||(20638291-20638359)
chr6 (1-47)||(17287826-17287872)
chr6 (1-47)||(25656671-25656716)
chr6 (1-47)||(18409857-18409903)
chr6 (1-47)||(20076745-20076790)
chr6 (1-47)||(22782269-22782314)
chr6 (1-47)||(25688544-25688589)
chr6 (1-47)||(1595591-1595636)
chr6 (1-47)||(12742359-12742404)
chr6 (1-47)||(16448602-16448647)
chr6 (1-47)||(18334667-18334712)
chr6 (1-47)||(19005088-19005133)
chr6 (1-47)||(19858994-19859039)
chr6 (1-47)||(20593818-20593864)
chr6 (1-47)||(22780257-22780303)
chr6 (1-47)||(24422589-24422634)
chr6 (1-47)||(25754851-25754896)
chr6 (1-47)||(30676785-30676830)
chr6 (1-47)||(33861836-33861881)
chr6 (1-47)||(33864320-33864365)
chr6 (1-47)||(34963415-34963460)
[»] chr2 (31 HSPs)
chr2 (1-69)||(22731242-22731310)
chr2 (8-66)||(298825-298883)
chr2 (1-47)||(23076487-23076533)
chr2 (1-47)||(22105454-22105500)
chr2 (1-47)||(23060558-23060604)
chr2 (1-47)||(38145-38190)
chr2 (1-37)||(23285910-23285946)
chr2 (1-47)||(22337160-22337206)
chr2 (17-69)||(22738188-22738240)
chr2 (1-69)||(23654394-23654462)
chr2 (1-47)||(571439-571484)
chr2 (1-47)||(6726037-6726082)
chr2 (1-47)||(18808985-18809030)
chr2 (1-47)||(21155135-21155180)
chr2 (1-47)||(23130904-23130949)
chr2 (1-47)||(23133371-23133416)
chr2 (1-47)||(23135632-23135677)
chr2 (1-47)||(23709607-23709652)
chr2 (1-47)||(23712088-23712133)
chr2 (1-47)||(24367816-24367861)
chr2 (1-47)||(24898270-24898315)
chr2 (1-47)||(24900753-24900798)
chr2 (1-47)||(24903230-24903275)
chr2 (1-47)||(24905707-24905752)
chr2 (1-47)||(24908182-24908227)
chr2 (1-47)||(26505421-26505466)
chr2 (1-47)||(26507899-26507944)
chr2 (1-47)||(32214996-32215041)
chr2 (1-47)||(34402597-34402642)
chr2 (1-47)||(39682355-39682400)
chr2 (1-45)||(23103429-23103471)
[»] chr1 (14 HSPs)
chr1 (1-69)||(27250737-27250805)
chr1 (1-47)||(22532314-22532360)
chr1 (1-47)||(34509825-34509871)
chr1 (1-66)||(21026725-21026790)
chr1 (1-47)||(45574917-45574963)
chr1 (1-47)||(50210243-50210289)
chr1 (1-49)||(20847182-20847230)
chr1 (1-47)||(13988908-13988953)
chr1 (1-47)||(16275439-16275484)
chr1 (1-47)||(21475162-21475207)
chr1 (1-47)||(21840809-21840854)
chr1 (1-47)||(21923366-21923411)
chr1 (1-47)||(23593810-23593855)
chr1 (1-66)||(22468707-22468772)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-47)||(26095-26141)
scaffold0122 (1-47)||(44737-44783)
[»] chr7 (26 HSPs)
chr7 (1-69)||(12698876-12698945)
chr7 (1-66)||(26212041-26212106)
chr7 (1-69)||(9509234-9509302)
chr7 (1-47)||(3564394-3564440)
chr7 (1-47)||(13647370-13647416)
chr7 (1-47)||(48273434-48273480)
chr7 (1-66)||(10589084-10589149)
chr7 (15-69)||(16386255-16386309)
chr7 (1-47)||(24275213-24275258)
chr7 (1-47)||(38227526-38227571)
chr7 (1-47)||(456363-456408)
chr7 (1-47)||(11393362-11393407)
chr7 (1-47)||(11972538-11972583)
chr7 (1-47)||(14949197-14949242)
chr7 (1-47)||(15376788-15376833)
chr7 (1-47)||(16213726-16213771)
chr7 (1-47)||(16232562-16232607)
chr7 (1-47)||(16410101-16410146)
chr7 (1-47)||(18640314-18640359)
chr7 (1-47)||(20385198-20385243)
chr7 (1-47)||(21189670-21189715)
chr7 (1-47)||(27216902-27216947)
chr7 (1-47)||(32125533-32125578)
chr7 (1-47)||(41522959-41523004)
chr7 (1-47)||(41525421-41525466)
chr7 (1-47)||(44116551-44116596)
[»] chr5 (22 HSPs)
chr5 (1-69)||(8286850-8286919)
chr5 (1-66)||(21729075-21729140)
chr5 (1-66)||(21808400-21808465)
chr5 (1-69)||(23390504-23390572)
chr5 (1-47)||(9077997-9078043)
chr5 (1-47)||(21997564-21997610)
chr5 (1-47)||(25431439-25431485)
chr5 (1-47)||(24529265-24529311)
chr5 (1-47)||(25421577-25421623)
chr5 (1-66)||(22075064-22075129)
chr5 (1-47)||(20902084-20902129)
chr5 (1-46)||(13025356-13025400)
chr5 (1-46)||(13095540-13095584)
chr5 (1-47)||(18418626-18418670)
chr5 (4-47)||(24493617-24493659)
chr5 (1-47)||(264843-264888)
chr5 (1-47)||(10733015-10733060)
chr5 (1-47)||(18319109-18319154)
chr5 (1-47)||(39245178-39245223)
chr5 (1-47)||(39363426-39363471)
chr5 (1-47)||(42245440-42245485)
chr5 (166-198)||(9441918-9441950)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-69)||(1056-1124)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-69)||(3515-3583)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-69)||(1896-1964)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-69)||(167986-168054)
scaffold0011 (1-47)||(51958-52004)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-47)||(3216-3262)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-47)||(4894-4940)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-66)||(28459-28524)
[»] scaffold0175 (1 HSPs)
scaffold0175 (8-47)||(13144-13183)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-47)||(17245-17293)
[»] scaffold0647 (1 HSPs)
scaffold0647 (5-69)||(6129-6193)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-69)||(11451-11519)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-47)||(8524-8570)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-47)||(3181-3226)
[»] scaffold0490 (1 HSPs)
scaffold0490 (4-66)||(2000-2062)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-47)||(4552-4598)
scaffold0228 (1-47)||(12134-12180)
scaffold0228 (1-47)||(22086-22132)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-47)||(16630-16676)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-47)||(32987-33032)
scaffold0145 (1-47)||(38806-38851)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-47)||(39522-39567)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-39)||(16158-16196)
scaffold0120 (4-66)||(32968-33029)
scaffold0120 (4-66)||(45976-46037)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-47)||(75245-75290)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-47)||(11330-11375)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-33)||(13542-13574)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-69)||(15472-15539)
[»] scaffold0121 (1 HSPs)
scaffold0121 (8-47)||(8563-8601)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-47)||(4736-4781)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-47)||(10815-10860)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-47)||(13434-13479)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-47)||(20789-20834)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-47)||(22928-22973)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-47)||(13989-14034)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-47)||(29974-30019)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-47)||(37863-37908)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-47)||(39958-40003)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-47)||(82114-82159)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-47)||(17515-17560)
scaffold0023 (1-47)||(94453-94498)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-47)||(158525-158570)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-69)||(32112-32178)
[»] scaffold0327 (1 HSPs)
scaffold0327 (19-47)||(3560-3588)
[»] scaffold0088 (1 HSPs)
scaffold0088 (10-66)||(20965-21021)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-33)||(25941-25973)
scaffold0026 (1-33)||(39903-39935)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 97 - 311
Target Start/End: Complemental strand, 48626561 - 48626348
Alignment:
Q  97 aaatattacagttgtttaaatttatgaaacatcgtatgctctataattaaaaaagtcaatcaagtctctgtaagcttaactcatttgatagagacaatgt 196  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  48626561 aaatattacaattgtttaaatttatgaaacatcgtattctctataattaaaaaagtcaatcaagtctctgtgagcttaactcatttgacagagacaatgt 48626462  T
Q  197 attataacagcatggatcaaagtttaaactctcgacaccatttatttaccttaaatggtgaatttataacaactacatnnnnnnntagtcaatcaagttt 296  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  48626461 attataacagcatggatcaaagtttaaactctcgacatcacttatttaccttaaatggtgaatttataacaactacat-aaaaaatagtcaatcaagttt 48626363  T
Q  297 ttccaccaaaatatt 311  Q
    |||||||||||||||    
T  48626362 ttccaccaaaatatt 48626348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20698511 - 20698443
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||    
T  20698511 aaataacaacagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatca 20698443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42386455 - 42386501
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42386455 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 42386501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13442319 - 13442387
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||    ||||||||||||||||||    
T  13442319 aaataacaacggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatca 13442387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17487901 - 17487969
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    ||||||||||||||||||    
T  17487901 aaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatca 17487969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17499383 - 17499451
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    ||||||||||||||||||    
T  17499383 aaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatca 17499451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12399254 - 12399300
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  12399254 aaataacaacagcaacataggcagtatacaaaatcagcatgacataa 12399300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14972899 - 14972945
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  14972899 aaataacaacagcaacacaggcagtatacaaaaacagcatgacataa 14972945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18438579 - 18438625
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  18438579 aaataacaacagcaacataggcagtatacaaaaacagcatgatataa 18438625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26686932 - 26686978
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  26686932 aaataacaacaacaacataggcagtatacaaaaacagcatgacataa 26686978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11424835 - 11424790
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  11424835 aaataacaacagcaacataggcagtatac-aaaacagcatgacataa 11424790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23083437 - 23083391
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  23083437 aaataacaatagcaacataggcagtatacaaaaacagaatgacataa 23083391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43840977 - 43841023
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  43840977 aaataacaacaacaacatagacagtatacaaaaacagcatgacataa 43841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 48626615 - 48626572
Alignment:
Q  57 ttgcaattcatcacatagataataaacacgttgaaccataaaat 100  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  48626615 ttgcatttcatcacatagataataaacacgtttaaccataaaat 48626572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9707727 - 9707682
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  9707727 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 9707682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14572634 - 14572679
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  14572634 aaataacaacagcaacatagacagtatac-aaaacagcatgacataa 14572679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17672668 - 17672713
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  17672668 aaataacaacaacaacatag-cagtatacaaaaacagcatgacataa 17672713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 25476457 - 25476415
Alignment:
Q  5 aacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  25476457 aacaacagcaacacaggtagtatacaaaaacagcatgacataa 25476415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29172703 - 29172658
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  29172703 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 29172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6469254 - 6469209
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  6469254 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 6469209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7781467 - 7781422
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  7781467 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 7781422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8899136 - 8899181
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  8899136 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 8899181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12119845 - 12119800
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  12119845 aaataacaacagcgacacag-cagtatacaaaaacagcatgacataa 12119800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13151910 - 13151865
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  13151910 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 13151865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13154375 - 13154330
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  13154375 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 13154330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14576908 - 14576863
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||    
T  14576908 aaataacaacagcaacatagacagtata-aacaacagcatgacataa 14576863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16282931 - 16282886
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  16282931 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 16282886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16454401 - 16454356
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  16454401 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 16454356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17446775 - 17446730
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  17446775 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 17446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17463220 - 17463265
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  17463220 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 17463265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28848731 - 28848686
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  28848731 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 28848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34159368 - 34159413
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  34159368 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 34159413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38962011 - 38961966
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  38962011 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 38961966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45607027 - 45606982
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  45607027 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 45606982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 55476533 - 55476578
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  55476533 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 55476578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 55500984 - 55501029
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  55500984 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 55501029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4757 - 4825
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4757 aaataacaacaacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatca 4825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 1 - 49
Alignment:
Q  21 gcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1 gcagtatacaaaaacagcatgacataaatacatcaattgcaattcatca 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23374435 - 23374370
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  23374435 aaataacaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattca 23374370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7088922 - 7088990
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  7088922 aaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatca 7088990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7798819 - 7798887
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||    
T  7798819 aaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatca 7798887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12902802 - 12902870
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    |||||||| |||||||||    
T  12902802 aaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatca 12902870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44052874 - 44052942
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  44052874 aaataacaacatcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatca 44052942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52873443 - 52873397
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  52873443 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 52873397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7893748 - 7893794
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  7893748 aaataacaatagcaacataggcagtatacaaaaacagcatgacataa 7893794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3096338 - 3096379
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatga 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3096338 aaataacaacagcaacataggcagtatacaaaaacagcatga 3096379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22636480 - 22636548
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||||    ||||||||||||||||||    
T  22636480 aaataacaacaacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatca 22636548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44929000 - 44928954
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  44929000 aaataacaacagcaacacaagcagtatacaaaaacagcatgacataa 44928954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 54798829 - 54798784
Alignment:
Q  2 aataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  54798829 aataacaacagcaacacaagcagtatacaaaaacagcatgacataa 54798784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16377597 - 16377553
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  16377597 aaataacaacagcaacataggcagtatac--aaacagcatgacataa 16377553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16270311 - 16270266
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  16270311 aaataacaatagcaacataggcagtatac-aaaacagcatgacataa 16270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18215394 - 18215349
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  18215394 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 18215349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12427 - 12382
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  12427 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 12382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1837629 - 1837584
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  1837629 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 1837584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14038693 - 14038739
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| | |||||||||||||||| |||| |||||    
T  14038693 aaataacaacagcaacacatgcagtatacaaaaacaacatggcataa 14038739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14280358 - 14280403
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||    
T  14280358 aaataacaacagcaacac-ggcagtatacaaaaacaacatgacataa 14280403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15118472 - 15118427
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  15118472 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 15118427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15355445 - 15355400
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  15355445 aaataacaacagcgacacag-cagtatacaaaaacagcatgacataa 15355400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16240045 - 16240000
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  16240045 aaataacaatagcaaaataggcagtatac-aaaacagcatgacataa 16240000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19618292 - 19618247
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||    
T  19618292 aaataacaacagcaacacag-cagtatacaaaaacatcatgacataa 19618247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23803385 - 23803340
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  23803385 aaataacaacagcaacacagt-agtatacaaaaacagcatgacataa 23803340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44773207 - 44773162
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  44773207 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 44773162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51463988 - 51463943
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  51463988 aaataacaacagcaacacagt-agtatacaaaaacagcatgacataa 51463943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52312552 - 52312597
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  52312552 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 52312597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6899936 - 6899968
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaa 33  Q
    ||||||||| |||||||||||||||||||||||    
T  6899936 aaataacaatagcaacataggcagtatacaaaa 6899968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13256 - 13324
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  13256 aaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatca 13324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24379 - 24310
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaa-acagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||    
T  24379 aaataacaacagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatca 24310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21919076 - 21919011
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  21919076 aaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattca 21919011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20536253 - 20536321
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  20536253 aaataacaacagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatca 20536321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7372823 - 7372869
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7372823 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 7372869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18818485 - 18818439
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18818485 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 18818439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16092418 - 16092372
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  16092418 aaataacaacagcaacacaggcagtatacaaaaacagcatgacataa 16092372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23406424 - 23406470
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  23406424 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 23406470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6759303 - 6759349
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  6759303 aaataacaacagcaacacaggcagtatacaaaaacaacatgacataa 6759349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28649120 - 28649074
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  28649120 aaataacaaaagcaacataggcagtatacgaaaacagcatgacataa 28649074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21924004 - 21923960
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacat 45  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  21924004 aaataacaacagcaacataggcagtctacaaaaacaacatgacat 21923960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31971302 - 31971369
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    ||||||| ||||||||||    
T  31971302 aaataacaacagcaacataggcagtatac-aaaacaacatgacataataatatcaattccaattcatca 31971369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 18879307 - 18879272
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaaca 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  18879307 aaataacaacagcaacataggcagtatacaaaaaca 18879272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14409564 - 14409519
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  14409564 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 14409519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16413436 - 16413391
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  16413436 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 16413391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22626781 - 22626826
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  22626781 aaataacaacagcaacataggcagtatac-aaaacaacatgacataa 22626826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45131072 - 45131028
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  45131072 aaataacaacagcaacataggcagtaaac--aaacagcatgacataa 45131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1484444 - 1484489
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  1484444 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 1484489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5853412 - 5853367
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  5853412 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 5853367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15203351 - 15203306
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  15203351 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 15203306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20403269 - 20403314
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  20403269 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 20403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22001795 - 22001840
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  22001795 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 22001840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 4483323 - 4483367
Alignment:
Q  2 aataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||    
T  4483323 aataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 4483367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 41598231 - 41598275
Alignment:
Q  2 aataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||    
T  41598231 aataacaacagcaacacagt-agtatacaaaaacagcatgacataa 41598275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20361036 - 20360968
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    ||||||||||||||||||    
T  20361036 aaataacaacagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatca 20360968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16496289 - 16496354
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    |||||||||||||||    
T  16496289 aaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattca 16496354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29060585 - 29060631
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29060585 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 29060631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20638359 - 20638291
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    ||||||||||||| ||||    
T  20638359 aaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatca 20638291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17287872 - 17287826
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17287872 aaataacaacagcaacataggtagtatacaaacacagcatgacataa 17287826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25656671 - 25656716
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  25656671 aaataacaacagcaacatag-cagtatacaaaaacagcatgacataa 25656716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18409903 - 18409857
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  18409903 aaataacaacagcaacacaggcagtatacgaaaacaacatgacataa 18409857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20076745 - 20076790
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  20076745 aaataacaacagcaacataggcagtaaac-aaaacagcatgacataa 20076790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22782269 - 22782314
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  22782269 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 22782314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25688544 - 25688589
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  25688544 aaataacaacagcaacataa-cagtatacaaaaacagcatgacataa 25688589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1595591 - 1595636
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  1595591 aaataacaacagcaacataa-cagtatacaaaaacaacatgacataa 1595636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12742359 - 12742404
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  12742359 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 12742404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16448647 - 16448602
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  16448647 aaataacaacagcgacacag-cagtatacaaaaacagcatgacataa 16448602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18334712 - 18334667
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  18334712 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 18334667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19005088 - 19005133
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  19005088 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 19005133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19859039 - 19858994
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  19859039 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 19858994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20593818 - 20593864
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||| |||||||||| | ||||||||| |||||||||||||||||    
T  20593818 aaataaaaacagcaacacatgcagtatacgaaaacagcatgacataa 20593864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22780303 - 22780257
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||  |||||||||| |||||||||||||| ||||||||    
T  22780303 aaataacaacaaaaacataggcaatatacaaaaacagcttgacataa 22780257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24422589 - 24422634
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24422589 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24422634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25754851 - 25754896
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  25754851 aaataacaacagcaacacagt-agtatacaaaaacagcatgacataa 25754896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30676830 - 30676785
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  30676830 aaataacaacagcaacacag-cagtatacaaaaacagcatgatataa 30676785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33861836 - 33861881
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  33861836 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 33861881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33864320 - 33864365
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  33864320 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 33864365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34963415 - 34963460
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  34963415 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 34963460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22731310 - 22731242
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    ||||||||||||||||||    
T  22731310 aaataacaacagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatca 22731242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 298883 - 298825
Alignment:
Q  8 aacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  298883 aacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattca 298825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23076487 - 23076533
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23076487 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 23076533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22105454 - 22105500
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22105454 aaataacaacagcaacataggcagtatgcaaaaacagcatgacataa 22105500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23060558 - 23060604
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  23060558 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 23060604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38190 - 38145
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  38190 aaataacaacagcaacataggcagtatac-aaaacagcatgacataa 38145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23285910 - 23285946
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacag 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  23285910 aaataacaacagcaacataggcagtatacaaaaacag 23285946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22337160 - 22337206
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  22337160 aaataacaacagcaacacaggctgtatataaaaacagcatgacataa 22337206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22738240 - 22738188
Alignment:
Q  17 ataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||| |||||||||||||||||||||    ||||||||||||||||||    
T  22738240 ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatca 22738188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23654462 - 23654394
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| || ||||||||| ||||||| ||| ||||||||||    ||||||||||||||||||    
T  23654462 aaataacaacaacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatca 23654394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 571439 - 571484
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  571439 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 571484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6726037 - 6726082
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  6726037 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 6726082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18808985 - 18809030
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  18808985 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 18809030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21155180 - 21155135
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  21155180 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 21155135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23130904 - 23130949
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23130904 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 23130949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23133371 - 23133416
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23133371 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 23133416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23135632 - 23135677
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23135632 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 23135677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23709652 - 23709607
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23709652 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 23709607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23712133 - 23712088
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23712133 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 23712088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24367816 - 24367861
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24367816 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24367861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24898315 - 24898270
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24898315 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24898270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24900798 - 24900753
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24900798 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24900753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24903275 - 24903230
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24903275 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24903230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24905752 - 24905707
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24905752 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24905707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24908227 - 24908182
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  24908227 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 24908182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26505421 - 26505466
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||    
T  26505421 aaataacaacagcaacacag-cagtatacaaaaatagcatgacataa 26505466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26507899 - 26507944
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||    
T  26507899 aaataacaacagcaacacag-cagtatacaaaaatagcatgacataa 26507944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32215041 - 32214996
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||||    
T  32215041 aaataacaacaacaacacag-cagtatacaaaaacagcatgacataa 32214996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34402642 - 34402597
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  34402642 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 34402597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39682355 - 39682400
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  39682355 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 39682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23103471 - 23103429
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacat 45  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||    
T  23103471 aaataaaaacagcaacataggcagtatac--aaacagcatgacat 23103429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27250805 - 27250737
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  27250805 aaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatca 27250737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22532314 - 22532360
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22532314 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 22532360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34509825 - 34509871
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34509825 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 34509871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21026725 - 21026790
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||    
T  21026725 aaataacaacagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattca 21026790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45574963 - 45574917
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  45574963 aaataacaacagcaacataggcagtatgcaaaaacagcatgacataa 45574917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50210289 - 50210243
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  50210289 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 50210243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20847230 - 20847182
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaat 49  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  20847230 aaataacaacagcaacataggcagtacacaaaatcagcatgacataaat 20847182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13988908 - 13988953
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  13988908 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 13988953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16275484 - 16275439
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||    
T  16275484 aaataacaacaacgacatag-cagtatacaaaaacagcatgacataa 16275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21475207 - 21475162
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  21475207 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 21475162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21840809 - 21840854
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||    
T  21840809 aaataacaacagcaacacag-cagtatacaaaaacatcatgacataa 21840854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21923411 - 21923366
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  21923411 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 21923366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23593855 - 23593810
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23593855 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 23593810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22468772 - 22468707
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||| ||||||||||||||  ||||| ||||||||||||| |    |||||||||||||||    
T  22468772 aaataacaatagcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattca 22468707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26141 - 26095
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26141 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 26095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44783 - 44737
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  44783 aaataacaacagcaacacaggcagtatacaaaaacagcatgacataa 44737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12698876 - 12698945
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaa-acagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  12698876 aaataacaacagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatca 12698945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26212041 - 26212106
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    |||||||||||||||    
T  26212041 aaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattca 26212106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9509234 - 9509302
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||    ||||||||||||||||||    
T  9509234 aaataacaacagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatca 9509302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3564440 - 3564394
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  3564440 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 3564394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13647370 - 13647416
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13647370 aaataacaacagcaacataggcagtatgcaaaaacagcatgacataa 13647416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48273434 - 48273480
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  48273434 aaataacaacagcaacacaggcagtatacaaaaacagcatgacataa 48273480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10589084 - 10589149
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||    |||||||||||||||    
T  10589084 aaataacaacagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattca 10589149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 16386309 - 16386255
Alignment:
Q  15 acataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||||||||||| |||||||||||||||  |||||||| | |||||||    
T  16386309 acataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatca 16386255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24275213 - 24275258
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  24275213 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 24275258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38227526 - 38227571
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  38227526 aaataacaatagcaacataggcagtatac-aaaacagcatgacataa 38227571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 456363 - 456408
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  456363 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 456408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11393407 - 11393362
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  11393407 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 11393362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11972538 - 11972583
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  11972538 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 11972583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14949242 - 14949197
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  14949242 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 14949197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15376833 - 15376788
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  15376833 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 15376788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16213726 - 16213771
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||    
T  16213726 aaataacaacagcaacacag-cagtatacaaaaacaacatgacataa 16213771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16232562 - 16232607
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  16232562 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 16232607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16410101 - 16410146
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  16410101 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 16410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18640314 - 18640359
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  18640314 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 18640359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20385243 - 20385198
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  20385243 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 20385198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21189715 - 21189670
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  21189715 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 21189670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27216902 - 27216947
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  27216902 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 27216947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32125533 - 32125578
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  32125533 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 32125578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41522959 - 41523004
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  41522959 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 41523004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41525421 - 41525466
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  41525421 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 41525466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44116551 - 44116596
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||    
T  44116551 aaataacaacagcaacacag-cagtatacaaaaacaacatgacataa 44116596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8286919 - 8286850
Alignment:
Q  1 aaataacaacagcaacataggcagtataca-aaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    ||||||||||||||||||    
T  8286919 aaataacaacagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatca 8286850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21729140 - 21729075
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    |||||||||||||||    
T  21729140 aaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattca 21729075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21808465 - 21808400
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    |||||||||||||||    
T  21808465 aaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattca 21808400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23390572 - 23390504
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    ||||||||||||||||||    
T  23390572 aaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatca 23390504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9077997 - 9078043
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  9077997 aaataacaacagcaacataggcagtatacgaaaacagcatgacataa 9078043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21997610 - 21997564
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21997610 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 21997564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25431439 - 25431485
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  25431439 aaataacaacagcaacataggcagtatacaaaaacaacatgacataa 25431485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24529265 - 24529311
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  24529265 aaataacaacaacaacataggcagtatacaaaaacaacatgacataa 24529311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25421577 - 25421623
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  25421577 aaataacaacaacaacataggcagtatacaaaaacaacatgacataa 25421623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22075064 - 22075129
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||    |||||||||||||||    
T  22075064 aaataacaacagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattca 22075129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20902129 - 20902084
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  20902129 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 20902084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13025356 - 13025400
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacata 46  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  13025356 aaataacaatagcaacataggcagtatac-aaaacagcatgacata 13025400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13095540 - 13095584
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacata 46  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  13095540 aaataacaatagcaacataggcagtatac-aaaacagcatgacata 13095584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18418626 - 18418670
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  18418626 aaataacaacatcaacataggcagtatac--aaacagcatgacataa 18418670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 24493617 - 24493659
Alignment:
Q  4 taacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  24493617 taacaatagcaacataggcagtatac-aaaacagcatgacataa 24493659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 264888 - 264843
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  264888 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 264843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10733060 - 10733015
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  10733060 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 10733015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18319154 - 18319109
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  18319154 aaataacaacagcgacacag-cagtatacaaaaacagcatgacataa 18319109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39245178 - 39245223
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  39245178 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 39245223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39363426 - 39363471
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  39363426 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 39363471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42245485 - 42245440
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  42245485 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 42245440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 9441918 - 9441950
Alignment:
Q  166 gtaagcttaactcatttgatagagacaatgtat 198  Q
    |||||||||||||| ||||||||||||||||||    
T  9441918 gtaagcttaactcagttgatagagacaatgtat 9441950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1124 - 1056
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||    
T  1124 aaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatca 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3515 - 3583
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  3515 aaataactaaagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatca 3583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1896 - 1964
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    ||||||||||||||||||    
T  1896 aaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatca 1964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 168054 - 167986
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||    
T  168054 aaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatca 167986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51958 - 52004
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  51958 aaataacaacagcaacataggcaatatacaaaaacagcatgacataa 52004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3262 - 3216
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3262 aaataacaacagcaacataggcagtatacaaaaacagcatgatataa 3216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4894 - 4940
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4894 aaataacaacagcaacataggcagtatacaaaatcagcatgacataa 4940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28459 - 28524
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    |||||||||||||||    
T  28459 aaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattca 28524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 13144 - 13183
Alignment:
Q  8 aacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13144 aacagcaacataggcagtatacaaaaacagcatgacataa 13183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17293 - 17245
Alignment:
Q  1 aaataacaacagcaacataggcagtataca--aaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  17293 aaataacaacagcaacataggcagtatacaaaaaaacagcatgacataa 17245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 6193 - 6129
Alignment:
Q  5 aacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |    ||||||||||||||||||    
T  6193 aacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatca 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11519 - 11451
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||    ||||||| ||||||||||    
T  11519 aaataacaacaacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatca 11451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8524 - 8570
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  8524 aaataacaatagcaacataggtagtatacaaaaacagtatgacataa 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3226 - 3181
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  3226 aaataacaacagcaacataggcagtatac-aaaacaacatgacataa 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 2000 - 2062
Alignment:
Q  4 taacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    |||||||||| ||||||||||||||||||| || ||||||||||    |||||||||||||||    
T  2000 taacaacagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattca 2062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4552 - 4598
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  4552 aaataacaacagcaacacaagcagtatataaaaacagcatgacataa 4598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12134 - 12180
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  12134 aaataacaacagcaacacaagcagtatataaaaacagcatgacataa 12180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22086 - 22132
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  22086 aaataacaacagcaacacaagcagtatataaaaacagcatgacataa 22132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16676 - 16630
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  16676 aaataacaacagcaacacaagcagtatacgaaaacagcatgacataa 16630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32987 - 33032
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  32987 aaataacaatagcaacataggcagtatac-aaaacagcatgacataa 33032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38806 - 38851
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  38806 aaataacaatagcaacataggcagtatac-aaaacagcatgacataa 38851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39522 - 39567
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  39522 aaataacaacaacaacataggcagtatac-aaaacagcatgacataa 39567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16158 - 16196
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagca 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  16158 aaataacaacaacaacataggcagtatacaaaaacagca 16196  T

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Target: scaffold0120; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 33029 - 32968
Alignment:
Q  4 taacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    |||||||||||||||    
T  33029 taacaacagcaacacaggcagtatac-aaaacagcatgacataataatatcaattgcaattca 32968  T

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Target: scaffold0120; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 45976 - 46037
Alignment:
Q  4 taacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    |||||||||||||||    
T  45976 taacaacagcaacacaggcagtatac-aaaacagcatgacataataatatcaattgcaattca 46037  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 75290 - 75245
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  75290 aaataacaacaacaacataggcagtatac-aaaacagcatgacataa 75245  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11330 - 11375
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  11330 aaataacaacagcaacacag-cagtatacaaaaacagcatgacataa 11375  T

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Target: scaffold0427 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13542 - 13574
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  13542 aaataacaacagcaacataggcagtatacaaaa 13574  T

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Target: scaffold0114 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15539 - 15472
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||    ||||||| ||||||||||    
T  15539 aaataacaagagcaacataggcagtatac-aaaacaacatgacataataatatcaatttcaattcatca 15472  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 8601 - 8563
Alignment:
Q  8 aacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8601 aacagcaacataggcagtat-caaaaacagcatgacataa 8563  T

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Target: scaffold0716 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4736 - 4781
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||    
T  4736 aaataacaacagcaacacag-cagtatacaaaaacaacatgacataa 4781  T

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Target: scaffold0454 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10815 - 10860
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||    
T  10815 aaataacaacagcaacacag-cagtatacaaaaacatcatgacataa 10860  T

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Target: scaffold0444 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13434 - 13479
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  13434 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 13479  T

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Target: scaffold0254 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20789 - 20834
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  20789 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 20834  T

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Target: scaffold0231 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22928 - 22973
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  22928 aaataacaacagcaacacac-cagtatacaaaaacagcatgacataa 22973  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13989 - 14034
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  13989 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 14034  T

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Target: scaffold0149 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29974 - 30019
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  29974 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 30019  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37863 - 37908
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  37863 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 37908  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39958 - 40003
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  39958 aaataacaatagcaacataggcagtatac-aaaacaacatgacataa 40003  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 82114 - 82159
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  82114 aaataacaacagcaacacagt-agtatacaaaaacagcatgacataa 82159  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17560 - 17515
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  17560 aaataacaatagcaacacag-cagtatacaaaaacagcatgacataa 17515  T

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Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 94453 - 94498
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  94453 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 94498  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 158570 - 158525
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataa 47  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  158570 aaataacaacagcaacacaa-cagtatacaaaaacagcatgacataa 158525  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32112 - 32178
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattcatca 69  Q
    |||||||||||||||||||||||||| ||  ||||| ||||||||||    ||||||| ||||||||||    
T  32112 aaataacaacagcaacataggcagtaaac--aaacaacatgacataataatatcaatttcaattcatca 32178  T

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Target: scaffold0327 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 3588 - 3560
Alignment:
Q  19 aggcagtatacaaaaacagcatgacataa 47  Q
    |||||||||||||||||||||||||||||    
T  3588 aggcagtatacaaaaacagcatgacataa 3560  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 20965 - 21021
Alignment:
Q  10 cagcaacataggcagtatacaaaaacagcatgacataaatccatcaattgcaattca 66  Q
    |||||||||||||| ||| |||||||| ||||||||||    |||||||||||||||    
T  20965 cagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattca 21021  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25941 - 25973
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaa 33  Q
    ||||||||| |||||||||||||||||||||||    
T  25941 aaataacaatagcaacataggcagtatacaaaa 25973  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39903 - 39935
Alignment:
Q  1 aaataacaacagcaacataggcagtatacaaaa 33  Q
    ||||||||| |||||||||||||||||||||||    
T  39903 aaataacaatagcaacataggcagtatacaaaa 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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