View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13537_high_1 (Length: 502)
Name: NF13537_high_1
Description: NF13537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13537_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 37 - 484
Target Start/End: Original strand, 43015792 - 43016239
Alignment:
| Q |
37 |
cctctaatttttattggtaatttaaatttcaataaagcatagcatttgattggaacatggatatataggcacgttaatttctaaagaaatgaacgtgatg |
136 |
Q |
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| T |
43015792 |
cctctaatttttattggtaatttaaatttcaataaagcatagcatttgattggaacatggatgtataggcacgttaatttctaaagaaatgaacgtgatg |
43015891 |
T |
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| Q |
137 |
tttcactagcagctatacattattaactttataattatatgaaatttcaacgttcggttggtaagtatacgcttttgcacaaaaagatgaaagaacatgc |
236 |
Q |
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| T |
43015892 |
tttcactagcagctatacattattaactttataattatatgaaatttcaacgttcggttggtaagtatacgcttttgcacaaaaagatgaaagaacatgc |
43015991 |
T |
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| Q |
237 |
atgaaattaagggttaaggaatgtgtagatcgagtgttgacatgattaataaacattgcttgcatacaccgaaaaattaaatttgtatggacctgaccgg |
336 |
Q |
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| T |
43015992 |
atgaaattaagggttaaggaatgtgtatatcgagtgttgacatgattaataaacattgcttgcatacaccgcaaaattaaatttgtatggacctgaccgg |
43016091 |
T |
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| Q |
337 |
atgataaatcagtgtcagtagctagctaaccaacgttggtttacccacctagctaagaaaagaaaatgtaacattataaatagataaatatagttttgat |
436 |
Q |
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| T |
43016092 |
atgataaatcagtgtcagtagctagctaaccaacgttggtttacccacctagctaagaaaagaaaatgtaacattataaataaataaatatagttttgat |
43016191 |
T |
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| Q |
437 |
gatgattgatacaaccattatatatattgtaggttggaataggagaag |
484 |
Q |
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| T |
43016192 |
gatgattgatacaaccattatatatattgtaggttggaataggagaag |
43016239 |
T |
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