View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13538_high_8 (Length: 260)
Name: NF13538_high_8
Description: NF13538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13538_high_8 |
 | |
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| [»] chr5 (2 HSPs) |
| |
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| [»] chr8 (4 HSPs) |
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| [»] chr4 (1 HSPs) |
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| [»] chr2 (6 HSPs) |
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| [»] chr7 (5 HSPs) |
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| [»] chr3 (6 HSPs) |
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| [»] scaffold0913 (1 HSPs) |
| | |
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| [»] scaffold0898 (1 HSPs) |
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| [»] scaffold0015 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 260
Target Start/End: Original strand, 17237936 - 17238182
Alignment:
| Q |
16 |
aacaatataaaatgga--gcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgt |
113 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |
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|
| T |
17237936 |
aacaacataaaatggatcgcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacatacaacaaaataaagttgcatcct |
17238035 |
T |
|
| Q |
114 |
tcttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactcca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
17238036 |
tcttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgcggtagcaaaatagaaatagaagaaaataaaggaagcatactcca |
17238135 |
T |
|
| Q |
214 |
aacatttaacctacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17238136 |
aacatttaagctacttcgacattggaaaaataaatgaagtgcatcct |
17238182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 260
Target Start/End: Original strand, 32296342 - 32296584
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||||||||| | ||| ||||||||||||||| | ||| |||| |||||| ||||||||||||||||||||||||| |||||||||| ||| | | || |
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|
| T |
32296342 |
acaatataaacttgagtctcaattacctcattctagactttgttatttctt-gtttccatatactccacaacacacagcaaaataaagccgcatcttcct |
32296440 |
T |
|
| Q |
117 |
tagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaac |
216 |
Q |
| |
|
|||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||||| |
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|
| T |
32296441 |
tagataaatcctgtaatgctttgaaaataatattcttgctatccatatcttgttgtagcaaaatagaaataaaagaaaagaaatgaagcatactccaaat |
32296540 |
T |
|
| Q |
217 |
atttaacctacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
32296541 |
ttttaagctacttggacattgaaaaaataaatgaagtgtatcct |
32296584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 181; Significance: 7e-98; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 28 - 260
Target Start/End: Original strand, 17834668 - 17834900
Alignment:
| Q |
28 |
tggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatct |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |
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|
| T |
17834668 |
tggagcatcaattacctcattccacactctcttgtttctttgtttccatatactccacaacacacaacaaaataaagctgcatcgtccttagataaatcc |
17834767 |
T |
|
| Q |
128 |
tgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctac |
227 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |
|
|
| T |
17834768 |
tgtgatgctttgaagataatattcttgctatccatatcttgttgtagcaaaatagaaatagaagaaaagaaaggaagcatgctccaaacatttaagctac |
17834867 |
T |
|
| Q |
228 |
ttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| |
|
|
| T |
17834868 |
ttggacattgaaaaaataaatgaagtgtatcct |
17834900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 10260052 - 10259816
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| || |
|
|
| T |
10260052 |
acaacataaactggaggatcaattacctcattccacactttgttgtttctttgtttccatatactccacaacacagaacaaaataaagttacatcgtcct |
10259953 |
T |
|
| Q |
117 |
tagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaac |
216 |
Q |
| |
|
|||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10259952 |
tagataaatcatgtaatgcattgaagataagattcttgctatccatatcttgttgtagcaaaatagaaatagaagaaaagaaaggaagcatactccaaac |
10259853 |
T |
|
| Q |
217 |
atttaacctacttcgacattgaaaaaataaatgaagtg |
254 |
Q |
| |
|
|| ||| |||||| | ||||| |||||||||||||||| |
|
|
| T |
10259852 |
atgtaagctacttggtcattg-aaaaataaatgaagtg |
10259816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 8783156 - 8782910
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaa--taaagttgcaacgtt |
114 |
Q |
| |
|
|||| ||||| | |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||| ||||| ||||| || | | |
|
|
| T |
8783156 |
acaacataaacttgagcatcaattacctctttccacactctgttgtttctttgtttctagatactccacagcacacagcaaaaaataaagcctcatcttc |
8783057 |
T |
|
| Q |
115 |
cttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaa |
214 |
Q |
| |
|
||| ||||||||| ||||| || |||||||||||||||| |||||| |||||| || ||| ||||||| |||||| |||| ||| |||||||||||||| |
|
|
| T |
8783056 |
cttgaataaatcttttaatgcttagaagataatattcttgttatccaaatcttgttgaagcgaaatagatatagaaaaaaagaaatgaagcatactccaa |
8782957 |
T |
|
| Q |
215 |
acatttaacctacttcgacattgaa-aaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|||||||| |||||| ||||||||| |||||||| |||||| ||||| |
|
|
| T |
8782956 |
acatttaagctacttggacattgaaaaaaataaaagaagtgtatcct |
8782910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 167
Target Start/End: Complemental strand, 16912903 - 16912770
Alignment:
| Q |
33 |
catcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaa |
132 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||| |||||| |||||||||| | |||||||| | | ||||||||||||| || || |
|
|
| T |
16912903 |
catcaattacctcattccacactatgttgtttatttgtttccagatactctacaacacacagc-aaataaagccacgtctttcttagataaattgtgcaa |
16912805 |
T |
|
| Q |
133 |
tgttttgaagataatattcttgctatccatatctt |
167 |
Q |
| |
|
|| ||| ||||||||||| ||| |||||||||||| |
|
|
| T |
16912804 |
tgctttcaagataatatttttgttatccatatctt |
16912770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 260
Target Start/End: Original strand, 48026595 - 48026839
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |
|
|
| T |
48026595 |
acaacataaattggagcatcaattacctcattccacacttcgttgtttctttgtttccatatactccacaacacacaacaaaataaagatgcatcgtcct |
48026694 |
T |
|
| Q |
117 |
tagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaac |
216 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
48026695 |
tagataaatcatgtaatgctttgaagataatattcttgttatccatatcttgttgtagcaaaatagaaatagaagaaaagaaaggaagcatgctccaaac |
48026794 |
T |
|
| Q |
217 |
atttaacctacttcgacattg-aaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|||||| |||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
48026795 |
atttaagctacttggacattgaaaaaaataaatgaagtgcatcct |
48026839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 5848756 - 5848513
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | |
|
|
| T |
5848756 |
acaacataaactggagcatcaattacctcatttcacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagatgcatcgtcat |
5848657 |
T |
|
| Q |
117 |
tagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaac |
216 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| |||||||| |
|
|
| T |
5848656 |
tagataaatcatgtaatgctttgaagataatattcttgctatccatatcttgttgtagaaaaatagaagtagaagaaaagaaaggaagcatgctccaaac |
5848557 |
T |
|
| Q |
217 |
atttaacctacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
5848556 |
atttaagctacttggacattgaaaaaataaatgaagtgtatcct |
5848513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 15746069 - 15746298
Alignment:
| Q |
34 |
atcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaat---cttgt |
130 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | |||||||||| | ||| |
|
|
| T |
15746069 |
atcaattacctcattctacacgttgttgtttctttgtttccatatattccacaacacacaacaaaataaagttgcatcttcattagataaataatcatgt |
15746168 |
T |
|
| Q |
131 |
aatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttc |
230 |
Q |
| |
|
| || |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| |
|
|
| T |
15746169 |
actgctttgaaaataatattcttactatccatatcttgttgtagcaaaatagaaatagaagaaaagaatggaagcatactccaaacatttaagctacttg |
15746268 |
T |
|
| Q |
231 |
gacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
15746269 |
agcattgaaaaaataaatgaagtgtatcct |
15746298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 260
Target Start/End: Original strand, 18580012 - 18580251
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||| ||||| | ||| ||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||| || | | || |
|
|
| T |
18580012 |
acaacataaacttgagtatcaattacctcactccacactttgttgattctttgtttgcatatactccacaacacataacaaaataaagccacatcttcct |
18580111 |
T |
|
| Q |
117 |
tagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaac |
216 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
18580112 |
tagataaatcttgtaatg--ctgaaaataatattcttgctatccatatcttgttgttgcaaaatagaaat--aagaaaagaaatagagcatactccaaac |
18580207 |
T |
|
| Q |
217 |
atttaacctacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
18580208 |
atttaagctacttggacattgaaaaaataaatgaagtgaatcct |
18580251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 33171389 - 33171582
Alignment:
| Q |
16 |
aacaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttc |
115 |
Q |
| |
|
||||| ||||| | ||| |||||||||| ||||||||||| ||||| |||||||||| || ||||||||||||||||| ||||| ||| || | | | |
|
|
| T |
33171389 |
aacaacataaagttgagtatcaattaccccattccacact-tgttgcttctttgttttcagatactccacaacacacagcaaaacaaaaccacatcttcc |
33171487 |
T |
|
| Q |
116 |
ttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatact |
210 |
Q |
| |
|
||||||||||| ||||| | |||||||||||||||||| ||||||| |||||| |||||||||||| | ||||||||||| ||||| | |||||| |
|
|
| T |
33171488 |
ttagataaatcatgtaaggctttgaagataatattctttctatccacatcttgttgtagcaaaatatacatagaagaaaagaaaggtaacatact |
33171582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 5509744 - 5509637
Alignment:
| Q |
16 |
aacaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttc |
115 |
Q |
| |
|
||||| ||||| | ||| ||| |||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||| ||| | | | |
|
|
| T |
5509744 |
aacaacataaacttgagaatctattacctcattccacactct--tgtttctttgttttcagatacttcacaacacacaacaaaataaagacgcatcttcc |
5509647 |
T |
|
| Q |
116 |
ttagataaat |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
5509646 |
ttagataaat |
5509637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 40492628 - 40492694
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaac |
88 |
Q |
| |
|
|||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |
|
|
| T |
40492628 |
acaacataaaatggagcatcaattacctca-----cattctgttgtttctttgttttcatatactccacaac |
40492694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 23040568 - 23040794
Alignment:
| Q |
34 |
atcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaat |
133 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||| |||||| |
|
|
| T |
23040568 |
atcaattacctcattccacactttgttgtttctttgtttccatatactccacaacacacaacaaaataaagctgcatcttcattagataaatcctgtaat |
23040667 |
T |
|
| Q |
134 |
gttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcgac |
233 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
23040668 |
gctttgaaaataatattcttgctatccatatcttgttgtagcaaaacagaaatagaagaaaagaaaggaagcatactccaaacatttaagctacttggac |
23040767 |
T |
|
| Q |
234 |
attgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||||||||||||||||| ||||| |
|
|
| T |
23040768 |
attgaaaaaataaatgaagtgtatcct |
23040794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 260
Target Start/End: Complemental strand, 13596545 - 13596304
Alignment:
| Q |
16 |
aacaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttc |
115 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | | | |
|
|
| T |
13596545 |
aacaacataaactggagcatcaattacctcatcccacactctgttgtttctttgtttccacatagtccacaacacacaacaaaataaagttgcatcatcc |
13596446 |
T |
|
| Q |
116 |
ttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaa |
215 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13596445 |
ttagataaatcatgtaatactttgaagataatattcttgttatccatatct---tgtagcaaaatagaaatagaagaaaagaaaggaagcatactccaaa |
13596349 |
T |
|
| Q |
216 |
catttaacctacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
13596348 |
catttaagctacttgaaaattgaaaaaataaatgaagtgtatcct |
13596304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 34 - 260
Target Start/End: Complemental strand, 22910780 - 22910554
Alignment:
| Q |
34 |
atcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaat |
133 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| | | ||||||||||| |||||| |
|
|
| T |
22910780 |
atcaattacctcattccacactttgttgtttctttgtttctatatactccacaacacacaacaaaataaagctgcatcttcattagataaatcatgtaat |
22910681 |
T |
|
| Q |
134 |
gttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcgac |
233 |
Q |
| |
|
| |||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||| | |
|
|
| T |
22910680 |
gctttgaaaataatattcttactatccatatcttgttgtagcaaaatagaaatagtagaaaggaatggaagcatactccaaacatttaagctacttgagc |
22910581 |
T |
|
| Q |
234 |
attgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||||| ||||||||||| ||||| |
|
|
| T |
22910580 |
attgaaaaattaaatgaagtgtatcct |
22910554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 33 - 254
Target Start/End: Complemental strand, 26754491 - 26754274
Alignment:
| Q |
33 |
catcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaa |
132 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| | |||| |||||| |||||||||||||||| |||| | | ||||||||||||||||| |
|
|
| T |
26754491 |
catcaattacctcattccacactctgttatttctttgtttctagatacgccacaatacacaacaaaataaagctgcatcttctttagataaatcttgtaa |
26754392 |
T |
|
| Q |
133 |
tgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcga |
232 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| || |
|
|
| T |
26754391 |
tgctttgaagat----ttcttgctatccatatcttgttgtagcaaaatataaatagaagaaaagaaaggaagcatactccaaacatttaagctacttgga |
26754296 |
T |
|
| Q |
233 |
cattgaaaaaataaatgaagtg |
254 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
26754295 |
cattgaaaaaataaatcaagtg |
26754274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 259
Target Start/End: Complemental strand, 48859067 - 48858825
Alignment:
| Q |
16 |
aacaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttc |
115 |
Q |
| |
|
||||| ||||| | ||||||||||||||||||||||| |||||| ||||||||||| || ||||||||||||||||| ||||||||||||| | | | |
|
|
| T |
48859067 |
aacaacataaacttgagcatcaattacctcattccacgatctgttttttctttgttttcaaatactccacaacacacagtcaaataaagttgcatcttcc |
48858968 |
T |
|
| Q |
116 |
ttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaa |
215 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| ||||| ||| |||||||||||||||| ||| | |||||||| |||| |
|
|
| T |
48858967 |
ttagataaatcatgtaatgctttgaagataatactcttgctatttatatcttgttgtaggaaattagaaatagaagaaaagaaatgcagcatacttcaaa |
48858868 |
T |
|
| Q |
216 |
catttaacctacttcgacattgaaaaaataaatgaagtgcatcc |
259 |
Q |
| |
|
|| |||| || || |||||||||||||||||| ||||| |||| |
|
|
| T |
48858867 |
ca-ttaagctgctcggacattgaaaaaataaataaagtgtatcc |
48858825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 34 - 260
Target Start/End: Complemental strand, 20685011 - 20684785
Alignment:
| Q |
34 |
atcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaat |
133 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||||| ||||||||||| ||| | | ||||||||||||||||||| |
|
|
| T |
20685011 |
atcaattacctcattccacactttattgtttctttatttccatatactccataacacacagcaaaataaagtcgcatcttccttagataaatcttgtaat |
20684912 |
T |
|
| Q |
134 |
gttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcgac |
233 |
Q |
| |
|
| |||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
20684911 |
gctttgaaaataatattcttgttatccatatcttgttgtagcaaaatagaaatagaagaaaagaaaggaagcatactccaaacatttaagctacttggac |
20684812 |
T |
|
| Q |
234 |
attgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||||||||||||||||| ||||| |
|
|
| T |
20684811 |
attgaaaaaataaatgaagtgtatcct |
20684785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 53580912 - 53580663
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||| ||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || | | | |
|
|
| T |
53580912 |
acaacataaacttgagtatcaattacctcattccacactttgttgtttctttgtttccatatactccacaacacacaacaaaataaagccacatcttcat |
53580813 |
T |
|
| Q |
117 |
taga------taaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatact |
210 |
Q |
| |
|
|||| |||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
53580812 |
tagaaaataataaatcctgtaatgctttgaaaataatattcttgctatccatatcttgttgtagcaaaatagaaatagaagaaaagaaaggaagcatact |
53580713 |
T |
|
| Q |
211 |
ccaaacatttaacctacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
53580712 |
ccaaacatttaagctacttggacattgaaaaaataaatgaagtgtatcct |
53580663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 8726496 - 8726271
Alignment:
| Q |
33 |
catcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaa |
132 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||| |||||||| | ||| ||||||||||||||||||||| || ||| | | |||| |||||| | ||| |
|
|
| T |
8726496 |
catcaattacctcgttcaacact--gttgtttatttgtttctagataatccacaacacacaacaaaatagagccgcatcttccttatttaaatcatttaa |
8726399 |
T |
|
| Q |
133 |
tgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcga |
232 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||| |||||||||| ||||| | ||||||| |||||||||||||||||||||||||| |||||| || |
|
|
| T |
8726398 |
tattttgaagataatattcttgctatctatatcttgttgtagcaaaagagaaagaaaagaaaagaaaggaagcatactccaaacatttaagctacttgga |
8726299 |
T |
|
| Q |
233 |
cattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||||||| |||||||||| ||||| |
|
|
| T |
8726298 |
cattgaaaaaaaaaatgaagtgtatcct |
8726271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 9078383 - 9078158
Alignment:
| Q |
33 |
catcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaa |
132 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||| |||||||| | ||| ||||||||||||||||||||| || ||| | | |||| |||||| | ||| |
|
|
| T |
9078383 |
catcaattacctcgttcaacact--gttgtttatttgtttctagataatccacaacacacaacaaaatagagccgcatcttccttatttaaatcatttaa |
9078286 |
T |
|
| Q |
133 |
tgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcga |
232 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||| |||||||||| ||||| | ||||||| |||||||||||||||||||||||||| |||||| || |
|
|
| T |
9078285 |
tattttgaagataatattcttgctatctatatcttgttgtagcaaaagagaaagaaaagaaaagaaaggaagcatactccaaacatttaagctacttgga |
9078186 |
T |
|
| Q |
233 |
cattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||||||||||| |||||||||| ||||| |
|
|
| T |
9078185 |
cattgaaaaaaaaaatgaagtgtatcct |
9078158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 4136017 - 4135902
Alignment:
| Q |
30 |
gagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttg |
129 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||| ||||||| | ||| | | |||||||||| | || |
|
|
| T |
4136017 |
gagcatcaatttcctcattcaacactttgttgattctttgtttccagatactacacaacacacaaccaaataaaatggcatcttccttagataaaccatg |
4135918 |
T |
|
| Q |
130 |
taatgttttgaagata |
145 |
Q |
| |
|
||| | |||||||||| |
|
|
| T |
4135917 |
taaggctttgaagata |
4135902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 52586121 - 52586159
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacact |
55 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
52586121 |
acaatataaattggagcatcaattacctcattccacact |
52586159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 134; Significance: 8e-70; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 15609779 - 15609542
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttct |
116 |
Q |
| |
|
|||| ||||| | ||||||||| |||||||||||||||| |||||||||| | |||||| |||||| |||||||||||||||||||||| | | ||| || |
|
|
| T |
15609779 |
acaacataaacttgagcatcaactacctcattccacactttgttgtttctctatttccagatactctacaacacacaacaaaataaagtcgtatcgtcct |
15609680 |
T |
|
| Q |
117 |
tagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaac |
216 |
Q |
| |
|
|||||||||||||||||| |||||| ||| ||||||| |||||| ||||||| |||||||||||||||||| ||||||| |||||| |||| ||| |||| |
|
|
| T |
15609679 |
tagataaatcttgtaatgctttgaacatagtattcttcctatccgtatcttgttgtagcaaaatagaaataaaagaaaagaaaggaggcatgctcaaaac |
15609580 |
T |
|
| Q |
217 |
atttaacctacttcgacattgaaaaaataaatgaagtg |
254 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
15609579 |
atttaagctacttggacattgaaaaaataaatgaagtg |
15609542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 32750749 - 32750887
Alignment:
| Q |
116 |
ttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaa |
215 |
Q |
| |
|
||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| | |||| ||||||| ||||||||||| |||| | ||||||| ||| |
|
|
| T |
32750749 |
ttagataaatcatgtaagactttcaagatcatattcttgctatccatatcttgttatagcgaaatagatatagaagaaaagaaagacaacatactctaaa |
32750848 |
T |
|
| Q |
216 |
catttaacctacttcgacattgaaaa--aataaatgaag |
252 |
Q |
| |
|
|||||| ||| || ||||||||||| ||||||||||| |
|
|
| T |
32750849 |
tatttaagctatttggacattgaaaaataataaatgaag |
32750887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 31 - 258
Target Start/End: Original strand, 24428123 - 24428348
Alignment:
| Q |
31 |
agcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgt |
130 |
Q |
| |
|
|||||||| |||||||||||||||| | |||||||||||||| || |||||||||||||| |||||||||||| ||| | | |||||||||||| ||| |
|
|
| T |
24428123 |
agcatcaactacctcattccacactttattgtttctttgttttcagatactccacaacac--aacaaaataaagccgcatcttccttagataaatcatgt |
24428220 |
T |
|
| Q |
131 |
aatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttc |
230 |
Q |
| |
|
|||| |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||| | |
|
|
| T |
24428221 |
aatgctttgaaaataatattcttgctattcatatcttgttgtagcaaaatagaaatagaagaaaacaaaggaaacatactccaaacacttaaactacctg |
24428320 |
T |
|
| Q |
231 |
gacattgaaaaaataaatgaagtgcatc |
258 |
Q |
| |
|
||||||||| |||||||| || |||||| |
|
|
| T |
24428321 |
gacattgaagaaataaattaaatgcatc |
24428348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 260
Target Start/End: Complemental strand, 32922683 - 32922448
Alignment:
| Q |
31 |
agcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgt |
130 |
Q |
| |
|
|||||||| ||||||||| || ||||| |||||||||||||| || |||||||||||||||||||||||||||| || | | |||||||||||| ||| |
|
|
| T |
32922683 |
agcatcaactacctcatttcatactctattgtttctttgttttcaaatactccacaacacacaacaaaataaaggcacatcttccttagataaatcgtgt |
32922584 |
T |
|
| Q |
131 |
aatgttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaat------agaagaaaataaaggaagcatactccaaacatttaacc |
224 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| |||| ||||||| ||||||||||||| | |
|
|
| T |
32922583 |
aatgctttgaagataatattcttgctatccatatcttgttgtaacaaaatagaaatagaaatagaagaaaagaaagaaagcatagtccaaacatttaagc |
32922484 |
T |
|
| Q |
225 |
tacttcgacattgaaaaaataaatgaagtgcatcct |
260 |
Q |
| |
|
||| | ||||||||||||||||||||| || ||||| |
|
|
| T |
32922483 |
tacctggacattgaaaaaataaatgaaatgtatcct |
32922448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 32109989 - 32109791
Alignment:
| Q |
53 |
actctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaatgttttgaagataatattct |
152 |
Q |
| |
|
|||| |||||||||||||||| | |||| | |||||||| ||||| |||||||||| | | ||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
32109989 |
actcggttgtttctttgtttctagatacactacaacaca--acaaattaaagttgcatcttccttggataaatcttgtaatgctttgaagataatattct |
32109892 |
T |
|
| Q |
153 |
tgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcgacattgaaaaaataaatgaag |
252 |
Q |
| |
|
|||| |||||||||| |||| |||||||||||||||||||| ||| | | |||||||||||||||||| |||||| || ||| ||||||||||||||| |
|
|
| T |
32109891 |
tgctctccatatcttattgtattaaaatagaaatagaagaaaagaaaagcaacatactccaaacatttaagctacttggatatttaaaaaataaatgaag |
32109792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 42131710 - 42131548
Alignment:
| Q |
17 |
acaatataaaatggagcatcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaac-gttc |
115 |
Q |
| |
|
|||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||| || | ||| |
|
|
| T |
42131710 |
acaacataaaattgagtatcaattacctcattccacactttgttgtttctttgtttccacatattccacaacacacatcaaaataaagccccatcttttc |
42131611 |
T |
|
| Q |
116 |
ttagataaatcttgtaatgttttgaagataatattcttgctatccatatcttgctgtagcaaa |
178 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
42131610 |
ttagataaatcatgtaatactttgaaaataatatttttgctatccatatcttgtcgtagcaaa |
42131548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 12970690 - 12970567
Alignment:
| Q |
37 |
aattacctcattccacactctgttgtttctttgttt----ccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaa |
132 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||| | |||||||| ||| | | || || || ||||||| |
|
|
| T |
12970690 |
aattacctcattccacactttgttatttctttgtttccatccatatactc--caacacacaatagaataaagtcgcatcttcatttgacaatacttgtaa |
12970593 |
T |
|
| Q |
133 |
tgttttgaagataatattcttgctat |
158 |
Q |
| |
|
|| ||||||||||||| |||||||| |
|
|
| T |
12970592 |
tggtttgaagataatagccttgctat |
12970567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0913 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0913
Description:
Target: scaffold0913; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 252
Target Start/End: Complemental strand, 3178 - 2962
Alignment:
| Q |
34 |
atcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaat |
133 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| || ||||| | ||||||| | |||| ||||| || | | ||||||||||||||||||| |
|
|
| T |
3178 |
atcaattacttc-ttccacactctgttgtttctttgttttcagatactgcgcaacacaaatcaaa-taaagccacatcttccttagataaatcttgtaat |
3081 |
T |
|
| Q |
134 |
gttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcgac |
233 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||| |
|
|
| T |
3080 |
gttttgaagataatattcttgatatccatatcttgttgtagaaaaatagaaatagaagaaaataaaggcaacatactccaaacatttaagttacttggac |
2981 |
T |
|
| Q |
234 |
attgaaaaaataaatgaag |
252 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
2980 |
attgaaaaagtaaatgaag |
2962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0898 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0898
Description:
Target: scaffold0898; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 2423 - 2639
Alignment:
| Q |
34 |
atcaattacctcattccacactctgttgtttctttgtttccatatactccacaacacacaacaaaataaagttgcaacgttcttagataaatcttgtaat |
133 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| || ||||| | ||||||| | |||| ||||| || | | ||||||||||||||||||| |
|
|
| T |
2423 |
atcaattacttc-ttccacactctgttgtttctttgttttcagatactgcgcaacacaaatcaaa-taaagccacatcttccttagataaatcttgtaat |
2520 |
T |
|
| Q |
134 |
gttttgaagataatattcttgctatccatatcttgctgtagcaaaatagaaatagaagaaaataaaggaagcatactccaaacatttaacctacttcgac |
233 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||| |
|
|
| T |
2521 |
gttttgaagataatattcttgatatccatatcttgttgtagaaaaatagaaatagaagaaaataaaggcaacatactccaaacatttaagttacttggac |
2620 |
T |
|
| Q |
234 |
attgaaaaaataaatgaag |
252 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
2621 |
attgaaaaagtaaatgaag |
2639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 52665 - 52709
Alignment:
| Q |
57 |
tgttgtttctttgtttccatatactccacaacacacaacaaaata |
101 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| | ||||||||||| |
|
|
| T |
52665 |
tgttatttctttgtttccaaatactccacaaaagacaacaaaata |
52709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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