View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13538_low_10 (Length: 250)

Name: NF13538_low_10
Description: NF13538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13538_low_10
NF13538_low_10
[»] chr5 (2 HSPs)
chr5 (102-250)||(17238161-17238314)
chr5 (128-250)||(32296563-32296685)
[»] chr7 (5 HSPs)
chr7 (128-250)||(13596203-13596325)
chr7 (128-250)||(26754167-26754289)
chr7 (141-250)||(29130332-29130441)
chr7 (128-250)||(22910453-22910575)
chr7 (166-250)||(23040773-23040857)
[»] chr4 (1 HSPs)
chr4 (128-250)||(48026818-48026940)
[»] chr2 (4 HSPs)
chr2 (140-250)||(5848424-5848534)
chr2 (128-250)||(15746277-15746399)
chr2 (128-250)||(18580230-18580351)
chr2 (128-250)||(33171787-33171909)
[»] chr6 (2 HSPs)
chr6 (128-250)||(15609435-15609557)
chr6 (141-220)||(32750904-32750983)
[»] chr1 (3 HSPs)
chr1 (128-250)||(32922347-32922469)
chr1 (128-221)||(24428358-24428451)
chr1 (143-211)||(32109698-32109766)
[»] chr3 (4 HSPs)
chr3 (128-250)||(20684684-20684806)
chr3 (128-250)||(53580564-53580684)
chr3 (128-188)||(8726170-8726230)
chr3 (128-188)||(9078057-9078117)
[»] chr8 (3 HSPs)
chr8 (142-218)||(8782823-8782899)
chr8 (196-250)||(10259777-10259831)
chr8 (132-189)||(10258333-10258390)
[»] scaffold0913 (1 HSPs)
scaffold0913 (128-218)||(2853-2943)
[»] scaffold0898 (1 HSPs)
scaffold0898 (128-218)||(2658-2748)


Alignment Details
Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 17238314 - 17238161
Alignment:
Q  102 cttagagtgttgtgagatgtagtagatatgtggcaaatttgtaggaattgcttaccaactcatgta-----cgtctaaaagataaaggagtcatatgttc 196  Q
    |||||||||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||     |||||||||||||||||||||||||||||    
T  17238314 cttagagtgtcgtgagatgtagtaaatatgtggtaaatttataggaattgcttaccaactcatgtaatgtacgtctaaaagataaaggagtcatatgttc 17238215  T
Q  197 tatgaattgtacactgtgtacggtgagtaacgaggatgcacttcatttattttt 250  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  17238214 tatgaattgtacacggtgtacggtgagcaacgaggatgcacttcatttattttt 17238161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 32296685 - 32296563
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||| |||||||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||  | |||||||||||||||||| | |      
T  32296685 tatgtggcgaatctgtaggaattgcataccaactcgtatacgtctaaaagataaaggagtcatgtgtcctatagactgtacactgtgtacggtgggcagt 32296586  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| ||||||||||||||||    
T  32296585 gaggatacacttcatttattttt 32296563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 13596203 - 13596325
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||| ||     
T  13596203 tatgtggcaaatttgtaggaattgcttaccaacccgtgtacgtctaaaagataaaggagtcacatgccctatgaattgtacattgtgtacggtgagcaat 13596302  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| ||||||||||||||||    
T  13596303 gaggatacacttcatttattttt 13596325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 26754167 - 26754289
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| | |      
T  26754167 tatgtggcgaatctgtaggaatttcttatcaactcatgtacgtctaaaagataaaggagtcacatgtcttatgaattgtacactgtgtacggtgggcagt 26754266  T
Q  228 gaggatgcacttcatttattttt 250  Q
    ||| || ||||| ||||||||||    
T  26754267 gagaatacacttgatttattttt 26754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 29130441 - 29130332
Alignment:
Q  141 tgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaacgaggatgcacttc 240  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||  |||||||||| ||||||||| | |  |||||| ||||||    
T  29130441 tgtaggaattgcttaccaactcgtgtacgtctaaaagataaaggagtcacatgtcctatagattgtacactatgtacggtgggcagtgaggatacacttc 29130342  T
Q  241 atttattttt 250  Q
    ||||||||||    
T  29130341 atttattttt 29130332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 22910453 - 22910575
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||| ||||||||||| ||||||||||  |||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||| | |      
T  22910453 tatgtggcgaatctgtaggaattgtttaccaactcgcgtacgtctaaaagataaaagagtcacatgtcctatggattgtacactgtgtacggtgggcagt 22910552  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| ||||||||||| ||||    
T  22910553 gaggatacacttcatttaatttt 22910575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 23040857 - 23040773
Alignment:
Q  166 tacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaacgaggatgcacttcatttattttt 250  Q
    |||||||||||||||||||||||| |||| ||||  ||||||| |||||||||||| | |  |||||| ||||||||||||||||    
T  23040857 tacgtctaaaagataaaggagtcacatgtcctattgattgtactctgtgtacggtgggcagtgaggatacacttcatttattttt 23040773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 48026940 - 48026818
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||  ||||||||||||||||||| ||| |||| ||     
T  48026940 tatgtggccaatttgtagaaattgcttaccaactcgtgtacgtctaaaagataaaggagttacatgccctatgaattgtacactgtgcacgatgagcaat 48026841  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||||||||||||||||||||    
T  48026840 gaggatgcacttcatttattttt 48026818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 5848424 - 5848534
Alignment:
Q  140 ttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaacgaggatgcactt 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||| || |||||| |||||    
T  5848424 ttgtaggaattgcttaccaactcgtgtacgtctaaaagataaaggagtcacatgccctatgaattgtacattgtgtacggtgagcaatgaggatacactt 5848523  T
Q  240 catttattttt 250  Q
    |||||||||||    
T  5848524 catttattttt 5848534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 15746399 - 15746277
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||| ||| ||| ||||||||||| ||||||||||  ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| | |      
T  15746399 tatggggcgaatctgtaggaattgtttaccaactcgcgtacgtctaaaagataaaggagtcacatgtcctatggattgtacactgtgtacggtgggcagt 15746300  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| ||||||||||||||||    
T  15746299 gaggatacacttcatttattttt 15746277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 18580351 - 18580230
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||| | |      
T  18580351 tatgtggcaa-tatgtaggaattgcttaccaactcgtgtacgtctaaaagataaaggagtcacatgtcctatggattgtacactatgtacggtgggcagt 18580253  T
Q  228 gaggatgcacttcatttattttt 250  Q
     ||||| ||||||||||||||||    
T  18580252 taggattcacttcatttattttt 18580230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 33171909 - 33171787
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||  |||| |||| |||||||||||||||| ||||||||||||||||||| |||| | ||||  | ||| ||||| | |||||||||||   ||     
T  33171909 tatgtggtgaattagtagaaattgcttaccaactcttgtacgtctaaaagataaatgagtgacatgtcgtgtgagttgtatattgtgtacggtggacaat 33171810  T
Q  228 gaggatgcacttcatttattttt 250  Q
    || ||| | ||||||||||||||    
T  33171809 gatgatacgcttcatttattttt 33171787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 15609435 - 15609557
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||||||||| |||||||||||||||  ||||||| |||||||||||||||||| ||| | ||||||||||||| ||||||||||| | ||     
T  15609435 tatgtggcgaatttgtagaaattgcttaccaacttgtgtacgtttaaaagataaaggagtcacatgctttatgaattgtacattgtgtacggtgggcaat 15609534  T
Q  228 gaggatgcacttcatttattttt 250  Q
    || ||| ||||||||||||||||    
T  15609535 gaagatacacttcatttattttt 15609557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 32750983 - 32750904
Alignment:
Q  141 tgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggt 220  Q
    ||||| |||||||||||||||| |||||| ||||||||||||| ||||| |||| |||||||||||| ||| ||||||||    
T  32750983 tgtagaaattgcttaccaactcttgtacgcctaaaagataaagtagtcacatgtcctatgaattgtatactttgtacggt 32750904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 32922347 - 32922469
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| ||||||| ||||||||||||||| ||   |||    
T  32922347 tatgtggagaatatgtaggaattgcttaccaactcgtgtacgtctaaaagataaaggagccacatgtcctatgaactgtacactgtgtacgatggacaac 32922446  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| || |||||||||||||    
T  32922447 gaggatacatttcatttattttt 32922469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 24428451 - 24428358
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtg 221  Q
    |||||||| ||| ||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||  |||| ||||||||||||||||||||    
T  24428451 tatgtggccaatctgtagaaattgcttaccaacttatgtacatctaaaagataaaggagtcacatgtcgtatggattgtacactgtgtacggtg 24428358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 32109698 - 32109766
Alignment:
Q  143 taggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacact 211  Q
    |||||||||||||||||||| ||| ||||||| ||||| |||||||| || | |||| |||||||||||    
T  32109698 taggaattgcttaccaactcgtgtgcgtctaagagatagaggagtcacatctcctattaattgtacact 32109766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 20684684 - 20684806
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||| | | |||| ||||| |||||||||||||||| ||| | ||     
T  20684684 tatgtggcgaatctgtagaaattgcttaccaactcgtgtacatctaaaagataaaggatttacatgtcctatggattgtacactgtgtacagtgggcaat 20684783  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| ||||||||||||||||    
T  20684784 gaggatacacttcatttattttt 20684806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 53580564 - 53580684
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacggtgagtaac 227  Q
    |||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||| ||| ||||  |||||||||| | |      
T  53580564 tatgtggcgaatctgtaggaattgcttaccaactcgtgcacgtctaaaagataaaggagtcacatgtcctatggattataca--gtgtacggtgggaagt 53580661  T
Q  228 gaggatgcacttcatttattttt 250  Q
    |||||| ||||||||||||||||    
T  53580662 gaggatacacttcatttattttt 53580684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 8726170 - 8726230
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtc 188  Q
    |||||||| | |||||||||||||||||||||||| |||||| |||||  |||||||||||    
T  8726170 tatgtggcgagtttgtaggaattgcttaccaactcgtgtacgcctaaactataaaggagtc 8726230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 9078057 - 9078117
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtc 188  Q
    |||||||| | |||||||||||||||||||||||| |||||| |||||  |||||||||||    
T  9078057 tatgtggcgagtttgtaggaattgcttaccaactcgtgtacgcctaaactataaaggagtc 9078117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 8782823 - 8782899
Alignment:
Q  142 gtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacg 218  Q
    |||||||||| |||||||||| |||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  8782823 gtaggaattgtttaccaactcgtgtatgtctaaaagataaaggagtcacatgtcctattaattgtacactgtgtacg 8782899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 10259777 - 10259831
Alignment:
Q  196 ctatgaattgtacactgtgtacggtgagtaacgaggatgcacttcatttattttt 250  Q
    |||||||||||||||||| ||||||||| || || ||| ||||||||||||||||    
T  10259777 ctatgaattgtacactgtatacggtgagcaatgaagatacacttcatttattttt 10259831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 10258333 - 10258390
Alignment:
Q  132 tggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtca 189  Q
    ||||| ||||||||||||||||||||||||  ||||| | ||||||||||| ||||||    
T  10258333 tggcagatttgtaggaattgcttaccaacttgtgtacatttaaaagataaaagagtca 10258390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0913 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0913
Description:

Target: scaffold0913; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 2853 - 2943
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacg 218  Q
    |||||||| |||||||||||||||| || |||||  ||||||||| ||||||||||||| |  |||| || ||||||| ||||| ||||||    
T  2853 tatgtggcgaatttgtaggaattgcatatcaacttgtgtacgtctgaaagataaaggagccgcatgtcctgtgaattgcacactatgtacg 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0898 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 2748 - 2658
Alignment:
Q  128 tatgtggcaaatttgtaggaattgcttaccaactcatgtacgtctaaaagataaaggagtcatatgttctatgaattgtacactgtgtacg 218  Q
    |||||||| |||||||||||||||| || |||||  ||||||||| ||||||||||||| |  |||| || ||||||| ||||| ||||||    
T  2748 tatgtggcgaatttgtaggaattgcatatcaacttgtgtacgtctgaaagataaaggagccgcatgtcctgtgaattgcacactatgtacg 2658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University