View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13539_high_13 (Length: 311)
Name: NF13539_high_13
Description: NF13539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13539_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 42287927 - 42288220
Alignment:
| Q |
1 |
ctattcaccattactctttgttttctggaaagtgcagtgataaatgttcatctctcatccaaaacagaaaagaaaatacggaggcattcaaatgtttctt |
100 |
Q |
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| T |
42287927 |
ctattcaccattactctttgttttctggaaagtgcagcgataaatgttcatctctcatccaaaacagaaaagaaaatacggaggcattaaaatgtttctt |
42288026 |
T |
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| Q |
101 |
aaaaatttattcataatgaaagataacattcctcttcaggaatgttgttgaaaggtatgtcaattctaaatgcgagaccgttgaaagaaggacaaatgta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42288027 |
aaaaatttattcataatgaaagataacattcctcttcaggaatgttgttcaaaggtatgtcaattctaaatgcgagaccgttgaaagaaggacaaatgta |
42288126 |
T |
|
| Q |
201 |
tgagaaaaacaaattaatcat-tttctttattcttagaatatttgagcatgacacaaaattgatttgtatggtaatgatcgtctcatttacaaatatatt |
299 |
Q |
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|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
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| T |
42288127 |
tgag------aaattaatcatgtttctttattcttagaatatttgagcctgacacaaaattgatttgtatggtaatgaccgtctcatttacaaacatatt |
42288220 |
T |
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