View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13540_low_7 (Length: 327)

Name: NF13540_low_7
Description: NF13540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13540_low_7
NF13540_low_7
[»] chr3 (57 HSPs)
chr3 (16-320)||(54950013-54950322)
chr3 (181-299)||(46894812-46894931)
chr3 (181-299)||(47410762-47410881)
chr3 (181-299)||(27396853-27396971)
chr3 (181-301)||(15003625-15003746)
chr3 (181-299)||(10228956-10229075)
chr3 (189-302)||(28731843-28731957)
chr3 (181-301)||(8381076-8381197)
chr3 (181-301)||(24273890-24274011)
chr3 (181-300)||(4976718-4976838)
chr3 (173-300)||(10047870-10047998)
chr3 (181-300)||(13525167-13525287)
chr3 (181-299)||(4232187-4232306)
chr3 (189-299)||(4833127-4833238)
chr3 (181-302)||(46838737-46838859)
chr3 (181-299)||(3917765-3917884)
chr3 (229-300)||(10752326-10752397)
chr3 (181-299)||(32960988-32961107)
chr3 (181-300)||(41464662-41464784)
chr3 (182-299)||(18271576-18271693)
chr3 (181-303)||(29212073-29212198)
chr3 (173-265)||(10473916-10474009)
chr3 (181-300)||(24650556-24650677)
chr3 (232-299)||(19961368-19961435)
chr3 (190-300)||(30552987-30553098)
chr3 (183-301)||(32590969-32591088)
chr3 (195-296)||(43904519-43904622)
chr3 (182-288)||(46800044-46800150)
chr3 (181-265)||(3440759-3440844)
chr3 (181-300)||(28266524-28266645)
chr3 (189-301)||(40559671-40559784)
chr3 (181-301)||(42296709-42296829)
chr3 (181-300)||(8507930-8508050)
chr3 (181-299)||(11029662-11029782)
chr3 (180-299)||(24751752-24751872)
chr3 (181-284)||(43426582-43426686)
chr3 (189-300)||(44107379-44107490)
chr3 (181-295)||(1242220-1242335)
chr3 (181-299)||(17500926-17501045)
chr3 (181-299)||(22371449-22371567)
chr3 (181-212)||(32597355-32597386)
chr3 (181-299)||(43897973-43898092)
chr3 (248-299)||(49285507-49285558)
chr3 (173-212)||(53669713-53669752)
chr3 (181-214)||(2558832-2558865)
chr3 (181-265)||(8128300-8128385)
chr3 (194-283)||(9318533-9318622)
chr3 (189-226)||(30740933-30740970)
chr3 (181-265)||(33886380-33886465)
chr3 (181-265)||(34481802-34481887)
chr3 (173-210)||(41921586-41921623)
chr3 (181-265)||(47069040-47069125)
chr3 (189-265)||(48209449-48209526)
chr3 (181-299)||(37124215-37124335)
chr3 (181-299)||(43605585-43605705)
chr3 (181-296)||(50238850-50238966)
chr3 (181-295)||(52256762-52256878)
[»] chr8 (64 HSPs)
chr8 (181-299)||(21530779-21530898)
chr8 (182-300)||(25250783-25250902)
chr8 (181-299)||(24654973-24655092)
chr8 (181-299)||(27928157-27928276)
chr8 (181-299)||(34711565-34711684)
chr8 (175-284)||(10006160-10006270)
chr8 (181-296)||(23681012-23681128)
chr8 (181-296)||(26690696-26690812)
chr8 (181-299)||(4312132-4312251)
chr8 (181-295)||(10096615-10096730)
chr8 (173-299)||(11098076-11098203)
chr8 (181-303)||(38070491-38070614)
chr8 (181-302)||(14188086-14188208)
chr8 (181-300)||(27544926-27545046)
chr8 (181-300)||(31639112-31639232)
chr8 (181-300)||(34143364-34143484)
chr8 (182-301)||(34744277-34744397)
chr8 (189-300)||(36586480-36586592)
chr8 (181-299)||(4430745-4430864)
chr8 (181-299)||(5704638-5704757)
chr8 (181-299)||(6317299-6317418)
chr8 (189-299)||(19649516-19649627)
chr8 (181-299)||(40744252-40744371)
chr8 (173-295)||(44814866-44814989)
chr8 (181-301)||(18040133-18040254)
chr8 (173-300)||(2508136-2508264)
chr8 (181-300)||(4977044-4977164)
chr8 (181-296)||(14243701-14243817)
chr8 (189-300)||(15129635-15129744)
chr8 (181-299)||(27849753-27849872)
chr8 (189-296)||(37295128-37295236)
chr8 (189-300)||(37817374-37817486)
chr8 (181-300)||(38953490-38953610)
chr8 (181-299)||(26737970-26738089)
chr8 (181-299)||(35421629-35421747)
chr8 (181-227)||(7882928-7882974)
chr8 (244-298)||(11908229-11908283)
chr8 (181-250)||(36055517-36055587)
chr8 (181-265)||(25063373-25063458)
chr8 (181-301)||(25199043-25199164)
chr8 (181-265)||(27817459-27817544)
chr8 (181-305)||(39666905-39667030)
chr8 (181-265)||(40772575-40772660)
chr8 (181-265)||(42158592-42158677)
chr8 (189-287)||(14258314-14258411)
chr8 (181-300)||(40344488-40344607)
chr8 (181-299)||(2733615-2733733)
chr8 (189-263)||(17919833-17919908)
chr8 (181-212)||(36442393-36442424)
chr8 (181-299)||(42650167-42650286)
chr8 (249-299)||(10286544-10286594)
chr8 (229-299)||(22762003-22762073)
chr8 (229-299)||(43820867-43820937)
chr8 (229-298)||(403666-403735)
chr8 (181-301)||(7772060-7772181)
chr8 (173-214)||(31941036-31941077)
chr8 (189-265)||(34642455-34642532)
chr8 (229-298)||(41746707-41746776)
chr8 (229-301)||(1258709-1258781)
chr8 (241-301)||(3054021-3054081)
chr8 (181-296)||(25893853-25893969)
chr8 (181-296)||(26675559-26675675)
chr8 (181-296)||(34540074-34540190)
chr8 (189-300)||(37708465-37708577)
[»] chr2 (42 HSPs)
chr2 (181-299)||(40812016-40812135)
chr2 (181-300)||(727299-727419)
chr2 (181-300)||(35476500-35476620)
chr2 (181-300)||(44948017-44948137)
chr2 (181-299)||(36794803-36794922)
chr2 (181-300)||(13267985-13268105)
chr2 (173-285)||(37198733-37198846)
chr2 (189-300)||(23957050-23957162)
chr2 (181-300)||(45049383-45049503)
chr2 (181-299)||(20251495-20251614)
chr2 (181-299)||(36754751-36754870)
chr2 (181-298)||(39070019-39070137)
chr2 (181-301)||(4014823-4014944)
chr2 (181-301)||(42200872-42200993)
chr2 (181-296)||(34481681-34481797)
chr2 (181-299)||(3048541-3048660)
chr2 (181-299)||(12236120-12236239)
chr2 (181-299)||(15897213-15897332)
chr2 (182-300)||(28855425-28855544)
chr2 (181-299)||(34667043-34667162)
chr2 (181-300)||(5887569-5887686)
chr2 (230-300)||(40592311-40592381)
chr2 (256-301)||(433135-433180)
chr2 (173-214)||(7315763-7315804)
chr2 (181-301)||(11061380-11061500)
chr2 (189-265)||(12541354-12541431)
chr2 (181-299)||(32023251-32023371)
chr2 (173-300)||(41164650-41164778)
chr2 (181-300)||(43035438-43035558)
chr2 (189-296)||(43461352-43461460)
chr2 (229-293)||(18251377-18251443)
chr2 (182-299)||(23080108-23080227)
chr2 (195-300)||(30854759-30854866)
chr2 (229-300)||(42007274-42007345)
chr2 (181-214)||(6590968-6591001)
chr2 (181-265)||(11543809-11543894)
chr2 (181-214)||(19593608-19593641)
chr2 (181-249)||(36754997-36755066)
chr2 (181-300)||(38490409-38490530)
chr2 (256-300)||(12847041-12847085)
chr2 (244-300)||(18999327-18999383)
chr2 (181-213)||(38082918-38082950)
[»] chr1 (44 HSPs)
chr1 (182-300)||(29510662-29510781)
chr1 (181-299)||(25820960-25821079)
chr1 (181-299)||(43676034-43676153)
chr1 (181-302)||(40958584-40958706)
chr1 (181-301)||(19338188-19338309)
chr1 (181-301)||(48391953-48392074)
chr1 (181-300)||(50248027-50248147)
chr1 (183-300)||(29005088-29005206)
chr1 (184-300)||(39787663-39787780)
chr1 (181-300)||(40685527-40685647)
chr1 (181-300)||(12282613-12282732)
chr1 (181-301)||(10635486-10635608)
chr1 (200-293)||(11797428-11797522)
chr1 (195-300)||(32533825-32533931)
chr1 (181-250)||(35758323-35758393)
chr1 (190-299)||(40503596-40503706)
chr1 (182-299)||(48314166-48314284)
chr1 (181-301)||(15104041-15104162)
chr1 (181-301)||(15906177-15906298)
chr1 (181-284)||(20164083-20164187)
chr1 (181-296)||(24119658-24119774)
chr1 (173-300)||(34010092-34010220)
chr1 (193-287)||(1576385-1576480)
chr1 (181-299)||(27078548-27078666)
chr1 (173-299)||(36586250-36586377)
chr1 (181-274)||(23225300-23225394)
chr1 (181-290)||(33845614-33845724)
chr1 (181-290)||(33948254-33948364)
chr1 (181-301)||(43025883-43026009)
chr1 (181-265)||(21522350-21522435)
chr1 (189-301)||(32880597-32880710)
chr1 (173-293)||(33132738-33132859)
chr1 (181-300)||(4126573-4126693)
chr1 (189-299)||(5598300-5598411)
chr1 (189-299)||(43086489-43086600)
chr1 (189-299)||(49948240-49948351)
chr1 (181-309)||(10430349-10430479)
chr1 (189-265)||(15331080-15331157)
chr1 (173-214)||(16261176-16261217)
chr1 (189-265)||(47429610-47429687)
chr1 (193-300)||(5511781-5511889)
chr1 (193-300)||(17068150-17068258)
chr1 (242-302)||(30455200-30455260)
chr1 (181-284)||(43500153-43500257)
[»] chr7 (53 HSPs)
chr7 (173-302)||(4069118-4069248)
chr7 (189-296)||(38261003-38261111)
chr7 (181-299)||(48612516-48612635)
chr7 (181-300)||(3497527-3497647)
chr7 (181-301)||(40013260-40013382)
chr7 (173-301)||(18944921-18945050)
chr7 (181-301)||(35157094-35157215)
chr7 (181-300)||(47086310-47086431)
chr7 (173-300)||(4106552-4106680)
chr7 (181-300)||(4887523-4887643)
chr7 (181-288)||(7264415-7264523)
chr7 (189-300)||(37117863-37117975)
chr7 (181-299)||(6327210-6327329)
chr7 (181-299)||(31717296-31717415)
chr7 (173-303)||(6596537-6596666)
chr7 (181-301)||(26794909-26795032)
chr7 (193-300)||(47584693-47584801)
chr7 (182-300)||(1573852-1573971)
chr7 (189-299)||(5523792-5523903)
chr7 (181-299)||(10061026-10061145)
chr7 (173-293)||(21226070-21226191)
chr7 (181-293)||(6369533-6369645)
chr7 (181-293)||(6377998-6378110)
chr7 (181-296)||(7312463-7312579)
chr7 (181-300)||(29151581-29151701)
chr7 (188-295)||(37919972-37920080)
chr7 (195-301)||(41780260-41780365)
chr7 (182-284)||(990229-990332)
chr7 (189-299)||(10422477-10422588)
chr7 (181-283)||(16816706-16816809)
chr7 (173-299)||(33628027-33628154)
chr7 (181-299)||(45041743-45041862)
chr7 (181-265)||(4227367-4227452)
chr7 (181-265)||(19258457-19258542)
chr7 (173-265)||(43133105-43133198)
chr7 (181-284)||(5508699-5508803)
chr7 (181-284)||(11074952-11075055)
chr7 (189-300)||(17895632-17895744)
chr7 (181-263)||(1869851-1869934)
chr7 (181-299)||(3861346-3861465)
chr7 (229-300)||(9379989-9380060)
chr7 (189-295)||(10166873-10166979)
chr7 (229-299)||(33228698-33228769)
chr7 (181-263)||(40656118-40656201)
chr7 (181-299)||(40809044-40809163)
chr7 (189-303)||(45946705-45946820)
chr7 (181-299)||(46416548-46416667)
chr7 (181-298)||(27396324-27396442)
chr7 (181-265)||(28649376-28649461)
chr7 (189-284)||(30627637-30627734)
chr7 (181-249)||(40011999-40012068)
chr7 (229-301)||(46715749-46715822)
chr7 (181-296)||(4674319-4674435)
[»] scaffold0515 (1 HSPs)
scaffold0515 (181-300)||(2476-2596)
[»] scaffold0306 (1 HSPs)
scaffold0306 (181-300)||(2476-2596)
[»] chr4 (57 HSPs)
chr4 (173-299)||(14285094-14285221)
chr4 (181-299)||(31263511-31263630)
chr4 (181-300)||(7512765-7512885)
chr4 (189-300)||(28983730-28983842)
chr4 (181-299)||(49882719-49882838)
chr4 (173-284)||(1052885-1052997)
chr4 (181-300)||(9569473-9569593)
chr4 (181-300)||(41323532-41323652)
chr4 (181-300)||(49319729-49319849)
chr4 (181-299)||(13389019-13389138)
chr4 (181-299)||(24712087-24712206)
chr4 (181-299)||(29894409-29894528)
chr4 (181-300)||(13632087-13632208)
chr4 (173-293)||(35615890-35616011)
chr4 (181-299)||(5396950-5397069)
chr4 (229-296)||(5880345-5880412)
chr4 (181-299)||(30044594-30044713)
chr4 (181-299)||(35318539-35318658)
chr4 (181-298)||(42411998-42412116)
chr4 (173-293)||(17271304-17271425)
chr4 (181-284)||(579252-579356)
chr4 (181-299)||(12821164-12821281)
chr4 (181-296)||(33416590-33416706)
chr4 (181-284)||(39997783-39997887)
chr4 (181-299)||(42154147-42154267)
chr4 (181-300)||(46488127-46488247)
chr4 (181-295)||(18813373-18813488)
chr4 (181-299)||(23974652-23974771)
chr4 (191-293)||(24407502-24407605)
chr4 (173-299)||(28010053-28010180)
chr4 (181-299)||(34684202-34684320)
chr4 (181-267)||(48628474-48628561)
chr4 (181-295)||(54907902-54908017)
chr4 (173-265)||(7944226-7944319)
chr4 (181-300)||(29428053-29428173)
chr4 (181-301)||(35828271-35828394)
chr4 (181-284)||(37050715-37050819)
chr4 (189-300)||(47462054-47462166)
chr4 (189-300)||(51675685-51675797)
chr4 (173-212)||(12315932-12315971)
chr4 (189-295)||(18371349-18371456)
chr4 (181-299)||(24550812-24550931)
chr4 (189-299)||(31375112-31375223)
chr4 (173-212)||(32104012-32104051)
chr4 (189-295)||(54096958-54097065)
chr4 (189-290)||(25586345-25586447)
chr4 (181-294)||(37166142-37166256)
chr4 (195-299)||(939586-939691)
chr4 (256-301)||(5060496-5060541)
chr4 (173-214)||(6328853-6328894)
chr4 (181-214)||(11310186-11310219)
chr4 (181-293)||(17846760-17846873)
chr4 (181-214)||(31583613-31583646)
chr4 (253-290)||(43173646-43173683)
chr4 (181-214)||(55853337-55853370)
chr4 (256-300)||(36752357-36752401)
chr4 (189-296)||(54864398-54864506)
[»] scaffold0287 (1 HSPs)
scaffold0287 (181-300)||(1068-1188)
[»] chr5 (66 HSPs)
chr5 (181-300)||(42448209-42448329)
chr5 (181-299)||(23311183-23311302)
chr5 (181-299)||(26802333-26802452)
chr5 (181-299)||(26809883-26810002)
chr5 (181-299)||(26824910-26825029)
chr5 (181-301)||(24652324-24652445)
chr5 (181-301)||(25328314-25328435)
chr5 (181-300)||(11968774-11968894)
chr5 (181-284)||(27389937-27390041)
chr5 (181-296)||(29119608-29119724)
chr5 (181-300)||(33028228-33028348)
chr5 (181-299)||(4617776-4617895)
chr5 (181-299)||(16496599-16496718)
chr5 (181-299)||(17869134-17869253)
chr5 (181-299)||(18115092-18115211)
chr5 (181-299)||(36569278-36569397)
chr5 (181-299)||(40044926-40045045)
chr5 (181-297)||(38682929-38683046)
chr5 (181-300)||(4164957-4165077)
chr5 (181-300)||(29806565-29806685)
chr5 (220-300)||(39143439-39143519)
chr5 (189-300)||(39150944-39151056)
chr5 (173-299)||(1650290-1650417)
chr5 (181-299)||(6672240-6672359)
chr5 (181-299)||(18473913-18474032)
chr5 (181-299)||(41562457-41562576)
chr5 (173-302)||(1269521-1269651)
chr5 (181-301)||(18625625-18625746)
chr5 (181-265)||(34856614-34856699)
chr5 (184-299)||(1244194-1244310)
chr5 (181-299)||(23074654-23074774)
chr5 (189-265)||(29622238-29622314)
chr5 (181-284)||(34930239-34930343)
chr5 (189-299)||(9053989-9054100)
chr5 (182-300)||(12665093-12665212)
chr5 (189-299)||(24051402-24051513)
chr5 (181-299)||(24443877-24443996)
chr5 (183-299)||(1287314-1287431)
chr5 (195-299)||(7179325-7179430)
chr5 (173-214)||(36105127-36105168)
chr5 (182-274)||(36259821-36259914)
chr5 (181-265)||(36854168-36854253)
chr5 (181-300)||(671069-671189)
chr5 (189-300)||(2103024-2103136)
chr5 (181-296)||(12819556-12819671)
chr5 (194-301)||(17080462-17080570)
chr5 (193-300)||(28143254-28143362)
chr5 (181-300)||(37067699-37067816)
chr5 (181-284)||(37191258-37191362)
chr5 (189-300)||(42068539-42068651)
chr5 (193-288)||(42653551-42653647)
chr5 (189-299)||(10165531-10165642)
chr5 (181-212)||(16371482-16371513)
chr5 (173-212)||(16906429-16906468)
chr5 (229-295)||(6053110-6053176)
chr5 (229-295)||(10154221-10154287)
chr5 (194-294)||(2025704-2025805)
chr5 (183-299)||(6041856-6041973)
chr5 (181-214)||(9640544-9640577)
chr5 (173-210)||(10109897-10109934)
chr5 (173-265)||(29293524-29293617)
chr5 (195-299)||(36136886-36136991)
chr5 (173-225)||(19867283-19867335)
chr5 (229-301)||(23219179-23219251)
chr5 (240-300)||(23310398-23310458)
chr5 (189-296)||(36246012-36246119)
[»] scaffold0002 (1 HSPs)
scaffold0002 (181-299)||(411647-411766)
[»] chr6 (31 HSPs)
chr6 (182-299)||(4083586-4083704)
chr6 (181-300)||(8448152-8448272)
chr6 (181-300)||(8456956-8457076)
chr6 (181-300)||(8939624-8939744)
chr6 (181-296)||(18861777-18861893)
chr6 (181-295)||(2958996-2959111)
chr6 (173-284)||(6266646-6266758)
chr6 (181-299)||(7098805-7098924)
chr6 (181-299)||(10181044-10181163)
chr6 (189-299)||(10531385-10531496)
chr6 (181-300)||(735443-735561)
chr6 (181-301)||(4480471-4480592)
chr6 (181-301)||(31205193-31205314)
chr6 (181-299)||(5603457-5603576)
chr6 (181-299)||(8329568-8329687)
chr6 (189-299)||(8374141-8374252)
chr6 (181-300)||(32643734-32643858)
chr6 (189-265)||(2395575-2395652)
chr6 (181-265)||(12795029-12795114)
chr6 (201-300)||(28594101-28594201)
chr6 (181-212)||(5626070-5626101)
chr6 (230-296)||(11152519-11152585)
chr6 (173-250)||(34539340-34539418)
chr6 (181-284)||(2301388-2301493)
chr6 (256-301)||(3456474-3456519)
chr6 (173-214)||(4891093-4891134)
chr6 (181-265)||(5660432-5660517)
chr6 (181-300)||(10330802-10330923)
chr6 (196-299)||(10263096-10263200)
chr6 (196-299)||(14982679-14982783)
chr6 (229-301)||(17534582-17534654)
[»] scaffold0402 (1 HSPs)
scaffold0402 (181-301)||(1251-1372)
[»] scaffold0061 (1 HSPs)
scaffold0061 (181-299)||(8869-8988)
[»] scaffold0008 (1 HSPs)
scaffold0008 (181-299)||(39323-39442)
[»] scaffold0364 (1 HSPs)
scaffold0364 (189-274)||(12002-12088)
[»] scaffold0432 (1 HSPs)
scaffold0432 (173-299)||(9366-9494)
[»] scaffold0595 (1 HSPs)
scaffold0595 (181-299)||(344-463)
[»] scaffold0457 (1 HSPs)
scaffold0457 (181-295)||(6782-6897)
[»] scaffold0778 (1 HSPs)
scaffold0778 (181-295)||(821-937)
[»] scaffold0204 (1 HSPs)
scaffold0204 (181-284)||(2768-2872)
[»] scaffold0684 (1 HSPs)
scaffold0684 (173-265)||(2194-2287)
[»] scaffold0548 (1 HSPs)
scaffold0548 (181-214)||(8183-8216)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 320
Target Start/End: Complemental strand, 54950322 - 54950013
Alignment:
Q  16 ataattaacgtgcgatttggttcggaccagaaggcagtagtacgcgatttatctccgnnnnnnnatggatgatgttatcggnnnnnnnnn-actaaataa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||||||||||          |||||||||    
T  54950322 ataattaacgtgcgatttggttcggaccagaaggcagtagtacgcgatttatctccgtttttttatggatcatgttatcggttttttttttactaaataa 54950223  T
Q  115 aaaattcaatgctagttttgcaccgttggttaaataaaaatcattaacggannnnnnn----agataggtgaaatggtaaagccattataaactcacaca 210  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||           ||||||  ||||||  ||||| |||||||||||||| |    
T  54950222 aaaattcaatgctagttttgcaccgtctgttaaataaaaatcattaacggatttttttcggtagatagacgaaatgacaaagctattataaactcacata 54950123  T
Q  211 catacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatatcattaacag 310  Q
    |||| |||||||||||| ||||||||||  |||||||||  ||| |||||||||||  |||||||||||||||||||  ||||||||||||||||||| |    
T  54950122 catatctgaaggtaccaggttcgaacctttgtcatggcacccgacctaacaattttagaattttgtcagttgagttaagacttctggatatcattaacgg 54950023  T
Q  311 attttcttgg 320  Q
    ||||| ||||    
T  54950022 attttgttgg 54950013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 46894931 - 46894812
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||| |  | ||||||||||||||||||||| ||  |||||||||| || ||||||||||    
T  46894931 gaaatggaaaagccaatataaactcacacacataagtgaaggtatcggggttcgaacctcggtcatggcatccggcctaacaatttcgatattttgtcag 46894832  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  46894831 ttgagctaggacttctggat 46894812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 47410762 - 47410881
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||| |||||||| ||| ||| |||||||||| || |||||| |||    
T  47410762 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccgacctaacaatttcgacattttgccag 47410861  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  47410862 ttgagctaggacttctggat 47410881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 27396971 - 27396853
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||  ||||||||| |||||||||||| ||  |||||||||| |  |||||||||||    
T  27396971 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccgggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgtcagt 27396872  T
Q  281 tgagttagaacttctggat 299  Q
    |||| ||| ||||||||||    
T  27396871 tgagctaggacttctggat 27396853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 15003746 - 15003625
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||| ||| ||| ||||||||||||  |||||| |||    
T  15003746 gaaatggcaaagccattataaactcacacacataggtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaattttggcattttgccag 15003647  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||  ||| ||||||||||||    
T  15003646 ttgaactaggacttctggatat 15003625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 10229075 - 10228956
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  10229075 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 10228976  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||  ||||||||||    
T  10228975 ttgagttaagacttctggat 10228956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 28731957 - 28731843
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| |||| |||||||||||||| |  ||||||||||  | |||||||| || ||||||||| ||| |||||||||| || ||||||||||||||| ||    
T  28731957 aaagtcattgtaaactcacacacacaagtgaaggtaccgggattcgaaccccgatcatggcatccgacctaacaatttcgacattttgtcagttgagcta 28731858  T
Q  288 gaacttctggatatc 302  Q
    |||||||| ||||||    
T  28731857 gaacttctagatatc 28731843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 8381197 - 8381076
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  8381197 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 8381098  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  8381097 ttgagctaggacttctggatat 8381076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 24273890 - 24274011
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||| | |||||||||   |||||||||| ||  |||||||||| |  ||||||||||    
T  24273890 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgaagttcgaaccctagtcatggcatccggcctaacaatttcggcattttgtcag 24273989  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||||||| |||||| |||||    
T  24273990 ttgagttaggacttctagatat 24274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 4976718 - 4976838
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||| ||||||| |  || |||||||  | |||||||| |||||||||||| ||  ||||||||||||  |||||| |||    
T  4976718 gaaatggcaaagccattataaactaacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattttggcattttgccag 4976817  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  4976818 ttgagctaggacttctggata 4976838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 10047998 - 10047870
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  |||||||||||  ||||||||| |||||||||||| ||   ||||||||| |  ||    
T  10047998 agataggcgaaatggcaaagccattataaactcacacacacaagtgaaggtaccagagttcgaaccccggtcatggcatccggcataacaatttcggcat 10047899  T
Q  272 tttgtcagttgagttagaacttctggata 300  Q
    |||  || ||||| ||| |||||||||||    
T  10047898 tttaccaattgagctaggacttctggata 10047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 13525287 - 13525167
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  13525287 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 13525188  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  13525187 ttgagctaggacttctggata 13525167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 4232187 - 4232306
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  4232187 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 4232286  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  4232287 ttgagctaggacttctggat 4232306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 4833127 - 4833238
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  ||||||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  4833127 aaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 4833226  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  4833227 ggacttctggat 4833238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 46838737 - 46838859
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||   |||||| || |||||||||||| ||  |||||||||| |  |||||  |||    
T  46838737 gaaatgggaaagccattataaactcacacacacaagtgaaggtaccggagttcgagccccggtcatggcatccggcctaacaatttcggcatttttccag 46838836  T
Q  280 ttgagttagaacttctggatatc 302  Q
    ||||| ||| |||||||||||||    
T  46838837 ttgagctaggacttctggatatc 46838859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 3917884 - 3917765
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  3917884 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 3917785  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  3917784 ttgagctaggacttctggat 3917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 10752397 - 10752326
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    |||||||||||||||||| |||  | |||||||||||||| ||||||||||||||  |||||||| ||||||    
T  10752397 gttcgaacctcggtcatgacataaggtctaacaattttgacattttgtcagttgaactagaacttgtggata 10752326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 32960988 - 32961107
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||||||  |  |||||||||| |  |||||| |||    
T  32960988 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatctggcctaacaatttcggcattttgccag 32961087  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  32961088 ttgagctaggacttctggat 32961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 41464784 - 41464662
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 277  Q
    ||||||| |||||||||||||||||||||||| ||   || ||||||   | |||||||| |||||||||||| ||| |||||||||| |  |||||| |    
T  41464784 gaaatggcaaagccattataaactcacacacacacaagtggaggtactggggttcgaaccccggtcatggcatccgacctaacaatttcggcattttgcc 41464685  T
Q  278 agttgagttagaacttctggata 300  Q
    ||||||| ||| |||||||||||    
T  41464684 agttgagctaggacttctggata 41464662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 18271693 - 18271576
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| |||| ||||||||||||||| ||| |  || |||||||  | ||| |||| || ||||||||| ||| |||||||||| |  |||||||||||    
T  18271693 aaatggcaaagtcattataaactcacatacacaagtggaggtaccgagattcaaacc-cgatcatggcatccgacctaacaatttcggcattttgtcagt 18271595  T
Q  281 tgagttagaacttctggat 299  Q
    |||||||||||||||||||    
T  18271594 tgagttagaacttctggat 18271576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 29212073 - 29212198
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 277  Q
    ||||||| |||||||||||||||||||||||| ||   || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |    
T  29212073 gaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcc 29212172  T
Q  278 agttgagttagaacttctggatatca 303  Q
    ||||||| ||| |||| |||||||||    
T  29212173 agttgagctaggacttatggatatca 29212198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 10473916 - 10474009
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  10473916 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 10474009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 24650556 - 24650677
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||||||||||||| |||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||    
T  24650556 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcca 24650655  T
Q  279 gttgagttagaacttctggata 300  Q
    |||||| ||| |||||||||||    
T  24650656 gttgaggtaggacttctggata 24650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 19961435 - 19961368
Alignment:
Q  232 cgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 299  Q
    |||||| | |||||| ||| ||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  19961435 cgaaccccagtcatgacatccgacctaacaatttcgacattttgtcagttgagttaggacttctggat 19961368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 30552987 - 30553098
Alignment:
Q  190 aagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 288  Q
    ||||||||||||||||||||||| |  || ||||| |  | |||||||  |||||||||||| || ||||||||||| |  |||||| |||||||| |||    
T  30552987 aagccattataaactcacacacacaagtggaggtatcggggttcgaactccggtcatggcatccggtctaacaatttcggcattttgccagttgagctag 30553086  T
Q  289 aacttctggata 300  Q
     |||||||||||    
T  30553087 gacttctggata 30553098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 32591088 - 32590969
Alignment:
Q  183 aatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 281  Q
    ||||| |||||||||||||||| ||||||| |  || |||||||  | |||||||| || ||||||||| ||  |||||||||| || |||||  |||||    
T  32591088 aatggcaaagccattataaactgacacacacaagtggaggtaccgggattcgaaccccgatcatggcatccggcctaacaatttcgacattttaccagtt 32590989  T
Q  282 gagttagaacttctggatat 301  Q
    ||| ||| ||||||||||||    
T  32590988 gagctaggacttctggatat 32590969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 43904519 - 43904622
Alignment:
Q  195 attataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaact 292  Q
    ||||||||||||||||||||  || ||||||||  ||| ||||| |||||||||||| ||  |||||||||| || | |||| ||||||||| |||||||    
T  43904519 attataaactcacacacataaatggaggtaccagggtttgaaccccggtcatggcatccggcctaacaatttcgacatttttttcagttgagctagaact 43904618  T
Q  293 tctg 296  Q
    ||||    
T  43904619 tctg 43904622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 46800044 - 46800150
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 281  Q
    |||||| |||||||||||||| ||||||||| |  || |||||||  |||| |||| | |||||| ||| |||||||||||||| |  |||||| || ||    
T  46800044 aaatggcaaagccattataaattcacacacacaagtggaggtaccgggttcaaaccccagtcatgacatccgatctaacaatttcggcattttgccaatt 46800143  T
Q  282 gagttag 288  Q
    |||||||    
T  46800144 gagttag 46800150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 3440844 - 3440759
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  3440844 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 3440759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 28266645 - 28266524
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||||||||||||| |||||||||| |  || ||| |||   ||||||||| |||||||||||| |   |||||||||| |  |||||||||    
T  28266645 gaaatggcaaagccattataaaactcacacacacaagtggaggcaccggagttcgaaccccggtcatggcatccagcctaacaatttcggcattttgtca 28266546  T
Q  279 gttgagttagaacttctggata 300  Q
    |||||| ||| |||||||||||    
T  28266545 gttgagctaggacttctggata 28266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 40559784 - 40559671
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || ||||| |   ||||||||| || ||| ||||| ||| |||||||||| |  ||||| ||||||||| ||    
T  40559784 aaagccattataaactcacacacacaagtggaggtatcggagttcgaaccccgatcaaggcatccgacctaacaatttcggcattttatcagttgagcta 40559685  T
Q  288 gaacttctggatat 301  Q
    | ||||||||||||    
T  40559684 ggacttctggatat 40559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 42296829 - 42296709
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||| || |||||| |  || |||||||   ||||||||| |||||||| ||| ||  ||||||||||||  |||||| |||    
T  42296829 gaaatggcaaagccattataaattctcacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattttg-cag 42296731  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  42296730 ttgagctaggacttctggatat 42296709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 8508050 - 8507930
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||| ||||| | |||||||||| ||  |||||||||| |  |||||  |||    
T  8508050 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggtttgaaccccagtcatggcatccggcctaacaatttcggcatttttccag 8507951  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||  |||||||||||    
T  8507950 ttgagctaagacttctggata 8507930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 11029782 - 11029662
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 278  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||||||  ||||||||||| |   |||||||||| || | ||||| ||    
T  11029782 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccctggtcatggcatccagcctaacaatttcgacatttttgcca 11029683  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||| ||| ||||||||||    
T  11029682 gttgagctaggacttctggat 11029662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 24751872 - 24751752
Alignment:
Q  180 tgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    |||||||  |||||||||||||| ||||||||| |  |||||||||||  ||||||||| || ||||| ||| ||  |||||||||| |  |||||| ||    
T  24751872 tgaaatgacaaagccattataaattcacacacacaagtgaaggtaccagggttcgaaccccgatcatgacatccggcctaacaatttcggcattttgcca 24751773  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||| ||| |||| |||||    
T  24751772 gttgagctaggacttgtggat 24751752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 43426686 - 43426582
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||| |||||||  || |||||||   ||||||||  ||||||||||||  || |||||||||| |  ||||| ||||    
T  43426686 gaaatggcaaagccattataaactcatacacataagtggaggtaccggggttcgaactccggtcatggcatctgacctaacaatttcggcattttttcag 43426587  T
Q  280 ttgag 284  Q
    |||||    
T  43426586 ttgag 43426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 44107490 - 44107379
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||| |||||||||||||||||| |  || ||||||| | |||||| || |||||||||||| ||  ||||||||||  | |||||| |||||||| ||    
T  44107490 aaagctattataaactcacacacacaagtggaggtaccgaggttcgaccc-cggtcatggcatccggcctaacaatttcaacattttgccagttgagcta 44107392  T
Q  288 gaacttctggata 300  Q
    |||||| ||||||    
T  44107391 gaacttgtggata 44107379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 1242335 - 1242220
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||| ||||| |  |||||| |||    
T  1242335 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaataatttcggcattttgccag 1242236  T
Q  280 ttgagttagaacttct 295  Q
    ||||| ||| ||||||    
T  1242235 ttgagctaggacttct 1242220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 17501045 - 17500926
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgtt-cgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || | |||    ||| |||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  17501045 gaaatggcaaagccattataaactcacacacacaagtggatgtatttggtttcgaaccccggtcatggcatccggcctaacaatttcggcatttttccag 17500946  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||| ||||||||||    
T  17500945 ttgagttaggacttctggat 17500926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 22371567 - 22371449
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||| ||||||| |  || ||| ||  || |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  22371567 gaaatggcaaagccattataaacttacacacacaaatggagg-actgtggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 22371469  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  22371468 ttgaggtaggacttctggat 22371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 32597355 - 32597386
Alignment:
Q  181 gaaatggtaaagccattataaactcacacaca 212  Q
    ||||||||||||||||||||||||||||||||    
T  32597355 gaaatggtaaagccattataaactcacacaca 32597386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 43897973 - 43898092
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| |||| |||||||||||||| |  || |||||||  | |||||| | |||||||||||| ||  |||||||||| |  |||||||| |    
T  43897973 gaaatggcaaagtcattgtaaactcacacacacaagtggaggtaccggggttcgaatcccggtcatggcatccggcctaacaatttcggcattttgtctg 43898072  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  43898073 ttgagctaggacttctggat 43898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 49285558 - 49285507
Alignment:
Q  248 cattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 299  Q
    ||||||| |||||||||| || ||||||||||| ||||||| ||||||||||    
T  49285558 cattcgacctaacaatttcgacattttgtcagtggagttaggacttctggat 49285507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 53669713 - 53669752
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacaca 212  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  53669713 agatagatgaaatggcaaagccattataaactcacacaca 53669752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 2558865 - 2558832
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||||| ||||||||||||||||||||||||||    
T  2558865 gaaatggcaaagccattataaactcacacacata 2558832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 8128300 - 8128385
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  ||||||||||    
T  8128300 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaattt 8128385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 9318622 - 9318533
Alignment:
Q  194 cattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttga 283  Q
    ||||||||||||||||||| | ||||||||| ||  ||||||| ||||| ||| ||| |   |||||||||| || |||||| |||||||    
T  9318622 cattataaactcacacacacatctgaaggtatcagattcgaacatcggttatgacatccagcctaacaatttcgacattttgccagttga 9318533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 30740970 - 30740933
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc 226  Q
    ||||||||||||||||||||||||||| || |||||||    
T  30740970 aaagccattataaactcacacacatacgtggaggtacc 30740933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 33886380 - 33886465
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||| ||||||||||    
T  33886380 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaattt 33886465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 34481802 - 34481887
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  |  ||||||| | ||||||||| |||||||| ||| ||  ||||||||||    
T  34481802 gaaatggcaaagccattataaactcacacacacaagtagaggtaccgaagttcgaaccccggtcatgtcatccggcctaacaattt 34481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 41921623 - 41921586
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacaca 210  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  41921623 agatagatgaaatggcaaagccattataaactcacaca 41921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 47069125 - 47069040
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  47069125 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 47069040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 48209449 - 48209526
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||| |||||||| ||||||||||||| ||||||||||   ||||||||  ||| |||||||||||  ||||||||||    
T  48209449 aaagtcattataagctcacacacatacgtgaaggtaccggggttcgaactccggccatggcattcggcctaacaattt 48209526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 37124335 - 37124215
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||| ||||||||| |||||||||| |   | ||||||| | ||||||||| |||||||||||||||  |||||||||| |  |||||| ||    
T  37124335 gaaatggcaaagtcattataaaactcacacacacaaggggaggtaccgaggttcgaaccccggtcatggcattcggcctaacaatttcggcattttgcca 37124236  T
Q  279 gttgagttagaacttctggat 299  Q
    || ||| ||  ||||||||||    
T  37124235 gtagagctatgacttctggat 37124215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 43605585 - 43605705
Alignment:
Q  181 gaaatggtaaagccattat-aaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| ||||||||||| ||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||| ||    |||||| ||    
T  43605585 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaaattcagcattttgcca 43605684  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||| ||| ||||||||||    
T  43605685 gttgagctaggacttctggat 43605705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 50238850 - 50238966
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||  || ||||||||| ||  |||||||||| || |||||  |||    
T  50238850 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggagttcgaactccgatcatggcatccggcctaacaatttcgacattttaccag 50238949  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  50238950 ttgagctaggacttctg 50238966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 52256762 - 52256878
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 278  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| |   |||||||| | || | ||||| ||    
T  52256762 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccagcctaacaatatcgacatttttgcca 52256861  T
Q  279 gttgagttagaacttct 295  Q
    |||||| ||||||||||    
T  52256862 gttgagctagaacttct 52256878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 21530898 - 21530779
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| ||| |||||||||| |  ||||||  ||    
T  21530898 gaaatggtaaaaccattataaactcacacacataagtgaaggtaccgggattcgaacctcggtcatggcatccgacctaacaatttcggtattttgctag 21530799  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| |||||| |||||||    
T  21530798 ttgagctagaacatctggat 21530779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 25250902 - 25250783
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  ||||||||||||  |||||| ||||    
T  25250902 aaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattttggcattttgccagt 25250803  T
Q  281 tgagttagaacttctggata 300  Q
    |||| ||| |||||||||||    
T  25250802 tgagctaggacttctggata 25250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 24655092 - 24654973
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||  | |||||||| | |||||||||| ||  ||||||||||||  |||||| |||    
T  24655092 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccagtcatggcatccggcctaacaattttggcattttgccag 24654993  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  24654992 ttgagctaggacttctggat 24654973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 27928276 - 27928157
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| || ||||||||||| |  |||||| |||    
T  27928276 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggtctaacaatttcggcattttgccag 27928177  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  27928176 ttgagctaggacttctggat 27928157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 34711565 - 34711684
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||| |||||||||| |  |||||| |||    
T  34711565 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccag 34711664  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  34711665 ttgagctaggacttctggat 34711684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 10006270 - 10006160
Alignment:
Q  175 ataggtgaaatggtaaagccattataaactcacacacatacctgaaggtac-catgttcgaacctcggtcatggcattcgatctaacaattttgaaattt 273  Q
    |||| ||||||||||||| |||||||||||||||||||||  |||||||||    ||||||||| || ||||| ||| || |||||||||||||| ||||    
T  10006270 atagatgaaatggtaaagtcattataaactcacacacataagtgaaggtactggggttcgaaccccgatcatgacatccggtctaacaattttgacattt 10006171  T
Q  274 tgtcagttgag 284  Q
    || ||||||||    
T  10006170 tgccagttgag 10006160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 23681128 - 23681012
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||| |||||||  |||||| |||    
T  23681128 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaataattttggcattttgccag 23681029  T
Q  280 ttgagttagaacttctg 296  Q
    ||||||||| |||||||    
T  23681028 ttgagttaggacttctg 23681012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 26690812 - 26690696
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  26690812 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 26690713  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  26690712 ttgagctaggacttctg 26690696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 4312251 - 4312132
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| | |||||||||| ||| |||||||||| |  |||||| |||    
T  4312251 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccagtcatggcatccgacctaacaatttcggcattttgccag 4312152  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  4312151 ttgagctaggacttctggat 4312132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 10096730 - 10096615
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || ||||| |  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  10096730 gaaatggcaaagccattataaactcacacacataagtggaggtatcggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 10096631  T
Q  280 ttgagttagaacttct 295  Q
    ||||| ||| ||||||    
T  10096630 ttgagctaggacttct 10096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 11098076 - 11098203
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  ||||| |||||||||||||||| |||  ||  || |||  | |||||||| | |||||| ||||||| |||||||||| || ||    
T  11098076 agatagatgaaatgacaaagcaattataaactcacacatataagtggtggaaccggggttcgaaccccagtcatgacattcgacctaacaatttcgatat 11098175  T
Q  272 tttgtcagttgagttagaacttctggat 299  Q
    ||||||||||||||||| ||||||||||    
T  11098176 tttgtcagttgagttaggacttctggat 11098203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 38070491 - 38070614
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||| | ||||||| | |||||||| ||| ||  |||||||||| |  |||||| |||    
T  38070491 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgtggttcgaatcccggtcatgtcatccggcctaacaatttcggcattttgccag 38070590  T
Q  280 ttgagttagaacttctggatatca 303  Q
    ||||| ||| ||||||||||||||    
T  38070591 ttgagctaggacttctggatatca 38070614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 14188208 - 14188086
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||  | ||||||||  ||||||||||| ||  |||||||||| || |||||| |||    
T  14188208 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaacccaggtcatggcatccggcctaacaatttcgacattttgccag 14188109  T
Q  280 ttgagttagaacttctggatatc 302  Q
    ||||| ||| |||||||||||||    
T  14188108 ttgagctaggacttctggatatc 14188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 27544926 - 27545046
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||| || |  || |||||||   ||||||||| ||| |||  ||| ||| |||||||||| || |||||| |||    
T  27544926 gaaatggcaaagccattataaactcacacgcacaagtggaggtaccggggttcgaaccccggacataacatccgacctaacaatttcgacattttgccag 27545025  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| |||||||||||||||    
T  27545026 ttgagctagaacttctggata 27545046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 31639112 - 31639232
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| |||||||||| ||||||||||  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||||||  ||    
T  31639112 gaaatggcaaagtcattataaacccacacacataagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcggcattttgctag 31639211  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||||||| |||||||||||    
T  31639212 ttgagttaggacttctggata 31639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 34143364 - 34143484
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||| ||||||||||||||||||||  || ||||||| | || |||||| |||||||||||| ||  |||||||||| |  ||||||  |     
T  34143364 gaaatggcaaagctattataaactcacacacataagtggaggtaccgaggtccgaaccccggtcatggcatccggcctaacaatttcggcattttgctaa 34143463  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||||||| |||||||||||    
T  34143464 ttgagttaggacttctggata 34143484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34744277 - 34744397
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| ||||||||||||||||||||||||||  || ||||||| | ||||||||| || ||||||||| ||  |||||||| | |  |||||| ||||    
T  34744277 aaatggcaaagccattataaactcacacacataagtggaggtaccgaggttcgaaccacgatcatggcatccgccctaacaatatcggcattttgccagt 34744376  T
Q  281 tgagttagaacttctggatat 301  Q
    |||| ||  ||||||||||||    
T  34744377 tgagctatgacttctggatat 34744397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 36586592 - 36586480
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||| | |  || |||||||  | |||||||| |||||||||||| ||| |||||||||| |  |||||| |||||||| ||    
T  36586592 aaagccattataaactcacacatacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccagttgagcta 36586493  T
Q  288 gaacttctggata 300  Q
    | |||||||||||    
T  36586492 ggacttctggata 36586480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 4430745 - 4430864
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  4430745 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 4430844  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  4430845 ttgagctaggacttctggat 4430864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 5704638 - 5704757
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||| |||| ||||||||||||  |  |||||||||| || ||||||||||    
T  5704638 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcaaaccccggtcatggcatctggcctaacaatttcgacattttgtcag 5704737  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| |||| |||||    
T  5704738 ttgagctaggacttgtggat 5704757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 6317418 - 6317299
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  6317418 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 6317319  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  6317318 ttgagctaggacttctggat 6317299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 19649516 - 19649627
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  19649516 aaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 19649615  T
Q  288 gaacttctggat 299  Q
      ||||||||||    
T  19649616 tgacttctggat 19649627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 40744252 - 40744371
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||| | | |||||||  ||||||||||||  |  ||||||||||||| |||||| |||    
T  40744252 gaaatggcaaaaccattataaactcacacacacaagtggaggtactagggttcgaactccggtcatggcatctggcctaacaattttgacattttgccag 40744351  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  40744352 ttgagctaggacttctggat 40744371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 44814989 - 44814866
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  ||    
T  44814989 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcat 44814890  T
Q  272 tttgtcagttgagttagaacttct 295  Q
    |||| |||||||| ||| ||||||    
T  44814889 tttgccagttgagctaggacttct 44814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 18040254 - 18040133
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||||||||||||||||||||||||||||| |  || |||||||   ||||||| || ||||||| ||| ||  ||||||||||    ||||| ||||    
T  18040254 gaaatggtaaagccattataaactcacacacacaagtggaggtaccggggttcgaatctgggtcatgacatccggcctaacaatttcagcattttatcag 18040155  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  18040154 ttgagctaggacttctggatat 18040133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 2508136 - 2508264
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  ||||| |||||||||||||||||| |  |  ||||| |   ||||||||| |||||||| ||| ||  ||||||||||||  ||    
T  2508136 agatagatgaaatgacaaagctattataaactcacacacacaagtagaggtatcggagttcgaaccccggtcatgacatccgtcctaacaattttggcat 2508235  T
Q  272 tttgtcagttgagttagaacttctggata 300  Q
    ||||| ||||||||||| |||||||||||    
T  2508236 tttgttagttgagttaggacttctggata 2508264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 4977044 - 4977164
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||  | ||  |||||||||| |  |||||| |||    
T  4977044 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggggtccggcctaacaatttcggcattttgccag 4977143  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  4977144 ttgagctaggacttctggata 4977164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 14243817 - 14243701
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||||||||||||||| |||||   |||||||||| |  |||||  |||    
T  14243817 gaaatggcaaagccattataaactcacacacacaaatggaggtaccggggttcgaacctcggtcatgacattcagcctaacaatttcggcattttaccag 14243718  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  14243717 ttgagctaggacttctg 14243701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 15129744 - 15129635
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 288  Q
    ||||| ||||||||||||||||||    || |||||| | |||||||||||| |||||||||  || ||||||||||||  |||||| | |||||| |||    
T  15129744 aaagctattataaactcacacacaag--tggaggtacgaggttcgaacctcgatcatggcatcagacctaacaattttggcattttgccggttgagctag 15129647  T
Q  289 aacttctggata 300  Q
     |||||||||||    
T  15129646 gacttctggata 15129635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 27849753 - 27849872
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 278  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||| |||| ||  ||||||||||  | | ||||||||    
T  27849753 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcat-gcatccggcctaacaatttcggcatttttgtca 27849851  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||||||| ||||||||||    
T  27849852 gttgagttaggacttctggat 27849872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 37295236 - 37295128
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  37295236 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 37295137  T
Q  288 gaacttctg 296  Q
    | |||||||    
T  37295136 ggacttctg 37295128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 37817486 - 37817374
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || ||||| |  | |||||||| |||||||||||| ||| |||||||||| |  |||||| |||||||| ||    
T  37817486 aaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccggtcatggcatccgacctaacaatttcgtcattttgccagttgagcta 37817387  T
Q  288 gaacttctggata 300  Q
    | |||| ||||||    
T  37817386 ggacttatggata 37817374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 38953490 - 38953610
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  38953490 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 38953589  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||  |||||||||||    
T  38953590 ttgagctaagacttctggata 38953610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 26738089 - 26737970
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||||||||||||||||||| ||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||  |||    
T  26738089 gaaatggtaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttaccag 26737990  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  26737989 ttgagctaggacttctggat 26737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 35421629 - 35421747
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||| ||| |  || ||||||   | |||||||| |||||||||||||||  |||||||||| || |||||| |||    
T  35421629 gaaatggcaaagccattataaactcaca-acacaagtggaggtactggggttcgaaccccggtcatggcattcggcctaacaatttcgacattttgccag 35421727  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||  ||| ||||||||||    
T  35421728 ttgaactaggacttctggat 35421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 7882974 - 7882928
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca 227  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||    
T  7882974 gaaatggcaaagccattataaactcacacacataagtgaaggtacca 7882928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 11908229 - 11908283
Alignment:
Q  244 atggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctgga 298  Q
    ||||| ||||| |||||| |||||| |||||| ||||||||||||||||||||||    
T  11908229 atggcgttcgacctaacagttttgatattttgacagttgagttagaacttctgga 11908283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 36055587 - 36055517
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcat 250  Q
    ||||||||||||| ||||||||||||||||||||  || |||||||   ||||||||| ||||||||||||    
T  36055587 gaaatggtaaagctattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcat 36055517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 25063458 - 25063373
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  25063458 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 25199164 - 25199043
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||| | ||||||| |||| ||  |||||||||| |  |||||  |||    
T  25199164 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaacccggtcatagcatccggcctaacaatttcggcattttaccag 25199065  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  25199064 ttgagctaggacttctggatat 25199043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 27817459 - 27817544
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| || |||||||||||    
T  27817459 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggtctaacaattt 27817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 305
Target Start/End: Original strand, 39666905 - 39667030
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||| ||||| |  || ||||| |  | || ||||| | |||||||||| ||  |||||||||| |  ||||||||||    
T  39666905 gaaatggcaaagccattataaactcatacacacaagtggaggtatcggggtttgaaccacagtcatggcatccggcctaacaatttcggcattttgtcag 39667004  T
Q  280 ttgagttagaacttctggatatcatt 305  Q
    ||||||||| ||||||| || |||||    
T  39667005 ttgagttaggacttctgaatttcatt 39667030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 40772575 - 40772660
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||   ||||||||| || ||||||||| ||  ||||||||||    
T  40772575 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccgatcatggcatccggcctaacaattt 40772660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 42158677 - 42158592
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||| ||| || |||||||||||||||||||||  || ||||||| | |||||||||| |||||||| ||||| | |||||||||    
T  42158677 gaaattgtatagtcattataaactcacacacataagtggaggtaccgaggttcgaaccttggtcatggtattcggtttaacaattt 42158592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 14258411 - 14258314
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagtta 287  Q
    |||| |||||||||||||  ||||||  || ||||||| |||||||||| ||||||| |||| ||| ||||||||||  | | |||||||||||||||||    
T  14258411 aaagtcattataaactca--cacataagtggaggtaccgtgttcgaaccccggtcatagcatccgacctaacaatttcaacatttttgtcagttgagtta 14258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 40344607 - 40344488
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| |||||||||||||||||||||  || ||||||||  ||||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  40344607 gaaatggcaaagtcattataaactcacacacataagtggaggtaccagggttcgaaccccgttcatgacatccg-gctaacaatttcggcattttgacag 40344509  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||  ||| |||||||||||    
T  40344508 ttgaactaggacttctggata 40344488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 2733733 - 2733615
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||| |||||||||||||||||| |  ||  ||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  2733733 gaaatggcaaagctattataaactcacacacacaagtgg-ggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 2733635  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  2733634 ttgagctaggacttctggat 2733615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 17919833 - 17919908
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaat 263  Q
    |||||||||||||||||||||||| |  || ||||||| | ||||||||| |||||||||||| ||  ||||||||    
T  17919833 aaagccattataaactcacacacacaagtggaggtaccgaggttcgaaccccggtcatggcatccggcctaacaat 17919908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 36442424 - 36442393
Alignment:
Q  181 gaaatggtaaagccattataaactcacacaca 212  Q
    ||||||||||||||||||||||||||||||||    
T  36442424 gaaatggtaaagccattataaactcacacaca 36442393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 42650286 - 42650167
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||| ||||| ||||||||||||| |||||||  || ||||||| | ||||||||| |  ||||||||| ||| |||||||||| |  |||||  | |    
T  42650286 gaaatgataaagtcattataaactcatacacataagtggaggtaccgaggttcgaaccccaatcatggcatccgacctaacaatttcggcattttaccgg 42650187  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||| |||| |||||    
T  42650186 ttgagttaggacttgtggat 42650167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 10286544 - 10286594
Alignment:
Q  249 attcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 299  Q
    ||||| |||||||||||||| |||||| |||||||| ||| ||||||||||    
T  10286544 attcggtctaacaattttgacattttgccagttgagctaggacttctggat 10286594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 22762073 - 22762003
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 299  Q
    |||||||| ||| ||||| ||| ||| |||||||||| |  ||||||||||||||  ||||||||||||||    
T  22762073 gttcgaacttcgatcatgacatccgacctaacaatttcggcattttgtcagttgaactagaacttctggat 22762003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 43820937 - 43820867
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 299  Q
    ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||||||||||| ||||||||||    
T  43820937 gttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccagttgagttaggacttctggat 43820867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 403735 - 403666
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctgga 298  Q
    ||||||||| |||||||||||| ||| |||||||||| |  ||||| ||||||||| ||| |||| ||||    
T  403735 gttcgaaccccggtcatggcatccgacctaacaatttcggcattttatcagttgagctaggacttgtgga 403666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 7772060 - 7772181
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||  |||    
T  7772060 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcattttaccag 7772159  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  7772160 ttgagctaggacttctggatat 7772181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 31941036 - 31941077
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacata 214  Q
    |||||| || ||||| ||||||||||||||||||||||||||    
T  31941036 agatagatggaatggcaaagccattataaactcacacacata 31941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 34642455 - 34642532
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||| ||||||||||||||||||| |  |  ||||||| ||||||||||| |||||||| ||| ||| ||||||||||    
T  34642455 aaagtcattataaactcacacacacaaattgaggtaccgatgttcgaaccccggtcatgacatccgacctaacaattt 34642532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 41746707 - 41746776
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctgga 298  Q
    ||||||||| || ||||||||| ||  |||| |||||||  ||||||||||||||| ||| |||||||||    
T  41746707 gttcgaaccccgatcatggcatccggcctaataattttggcattttgtcagttgagctaggacttctgga 41746776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 1258781 - 1258709
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    |||||||||  ||||||||||| | ||||||| ||||| | ||||||||||||||| |  |||||||| ||||    
T  1258781 gttcgaaccctggtcatggcatccaatctaactattttaacattttgtcagttgagctgaaacttctgaatat 1258709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 3054081 - 3054021
Alignment:
Q  241 gtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    |||||||||| ||  |||||||||| |  |||||| |||||||| ||||||||||||||||    
T  3054081 gtcatggcatccggcctaacaatttcggcattttgccagttgagctagaacttctggatat 3054021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 25893969 - 25893853
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||| ||||||| |  || |||||||   ||||||||| || ||||||||| ||  ||||||||||    |||||| |||    
T  25893969 gaaatggcaaagccattataaacttacacacacaaatggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcagcattttgccag 25893870  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  25893869 ttgagctaggacttctg 25893853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 26675675 - 26675559
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  |||| |||| ||||||||  || ||  |||||||||| |  |||||  |||    
T  26675675 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcaaaccccggtcatgatatccggcctaacaatttcggcattttaccag 26675576  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  26675575 ttgagctaggacttctg 26675559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 34540074 - 34540190
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||| |||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  34540074 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcaaaccccgatcatggcatccggcctaacaatttcggcattttgccag 34540173  T
Q  280 ttgagttagaacttctg 296  Q
    ||||  ||| |||||||    
T  34540174 ttgaactaggacttctg 34540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 37708465 - 37708577
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||| ||||||| |  || |||||||   ||||||||| ||||||| |||| ||  |||||||||| |  |||||| |||||||| ||    
T  37708465 aaagccattataaacttacacacacaagtggaggtaccggggttcgaaccccggtcatagcatccgtcctaacaatttcggcattttgccagttgagcta 37708564  T
Q  288 gaacttctggata 300  Q
    | |||| ||||||    
T  37708565 ggacttatggata 37708577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 40812135 - 40812016
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||  | |||||||| |||||||| ||| ||| |||||||||| |  ||||||||||    
T  40812135 gaaatggcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgtcag 40812036  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  40812035 ttgaggtaggacttctggat 40812016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 727299 - 727419
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||| |||||||||| |  ||||||||||    
T  727299 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccgatcatggcatccgacctaacaatttcggcattttgtcag 727398  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  727399 ttgagctaggacttctggata 727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 35476500 - 35476620
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  35476500 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 35476599  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  35476600 ttgagctaggacttctggata 35476620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 44948137 - 44948017
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||| | |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| || ||||||||||    
T  44948137 gaaatggcaaagccattataaactcacacatacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcgacattttgtcag 44948038  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  44948037 ttgagctaggacttctggata 44948017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 36794922 - 36794803
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||| ||| | ||||||||| || ||||||||||||  ||||||||||||| |||||  |||    
T  36794922 gaaatggcaaagccattataaactcacacacacaagtggaggaaccgaggttcgaaccccgatcatggcattcggcctaacaattttgacattttaccag 36794823  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  36794822 ttgagctaggacttctggat 36794803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 13267985 - 13268105
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||| |||||||||| |  |||||| |||    
T  13267985 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgccag 13268084  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  13268085 ttgagctaggacttctggata 13268105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 37198733 - 37198846
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||| | ||||||||||||||||||||||||||  ||||||||||   ||||||||| || ||||| |||  |  |||||||||| || ||    
T  37198733 agatagatgaaattgcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccgatcatgccatctggcctaacaatttcgacat 37198832  T
Q  272 tttgtcagttgagt 285  Q
    ||||||||||||||    
T  37198833 tttgtcagttgagt 37198846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 23957162 - 23957050
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||| |||||||||||||||  || |||||||  | |||||||| || ||||| ||| ||  |||||||||| || |||||| |||||||| ||    
T  23957162 aaagccattaaaaactcacacacataagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgacattttgccagttgagcta 23957063  T
Q  288 gaacttctggata 300  Q
    |||||||||||||    
T  23957062 gaacttctggata 23957050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 45049503 - 45049383
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||  |||||||||| || |||||| |||    
T  45049503 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcgaaccccggtcatgacatccggcctaacaatttcgacattttgccag 45049404  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||  |||||||||||    
T  45049403 ttgagctaagacttctggata 45049383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 20251495 - 20251614
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  20251495 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 20251594  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  20251595 ttgagctaggacttctggat 20251614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 36754751 - 36754870
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||| |||| ||  |||||||||| |  |||||| |||    
T  36754751 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcggcattttgccag 36754850  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  36754851 ttgagctaggacttctggat 36754870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 298
Target Start/End: Complemental strand, 39070137 - 39070019
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  39070137 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 39070038  T
Q  280 ttgagttagaacttctgga 298  Q
    ||||| ||| |||||||||    
T  39070037 ttgagctaggacttctgga 39070019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 4014823 - 4014944
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||  || ||  |||||||||| |  ||||||||||    
T  4014823 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgagatccggcctaacaatttcggcattttgtcag 4014922  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| |||| |||||||    
T  4014923 ttgagctaggacttgtggatat 4014944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 42200872 - 42200993
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||  ||||||||||||||||||| |  || ||||||| | ||||||||| || ||||| ||| ||  ||||||||||||  |||||| |||    
T  42200872 gaaatggaaaaatcattataaactcacacacacaagtggaggtaccgaggttcgaaccccgatcatgacatccggcctaacaattttggcattttgccag 42200971  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  42200972 ttgagctaggacttctggatat 42200993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 34481681 - 34481797
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  ||| ||||||   ||||||||| |||||||||||| |   |||||||||| |  |||||| |||    
T  34481681 gaaatggcaaagccattataaactcacacacacaagtgagggtaccggggttcgaaccccggtcatggcatccagcctaacaatttcggcattttgccag 34481780  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  34481781 ttgagctaggacttctg 34481797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 3048660 - 3048541
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||| ||||||||||| |||||||||||||||  || |||||||   ||||||||| || ||||||||| ||  |||||||||| || ||||||  ||    
T  3048660 gaaatgataaagccattaaaaactcacacacataagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcgacattttgctag 3048561  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| |||| |||||    
T  3048560 ttgagctaggacttatggat 3048541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 12236239 - 12236120
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||| ||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  12236239 gaaatggcaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 12236140  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  12236139 ttgagctaggacttctggat 12236120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 15897332 - 15897213
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  15897332 gaaatggcaaaggcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 15897233  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  15897232 ttgagctaggacttctggat 15897213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 28855425 - 28855544
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| |||||||||||||| ||||||||| |  |||||| |||  | |||||||| | |||||||||| ||  ||||||||||||  |||||| ||||    
T  28855425 aaatggcaaagccattataaattcacacacacaagtgaaggaaccgggattcgaaccccagtcatggcatccgccctaacaattttggcattttgccagt 28855524  T
Q  281 tgagttagaacttctggata 300  Q
    |||| ||| ||||| |||||    
T  28855525 tgagctaggacttccggata 28855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 34667162 - 34667043
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| ||  |||||||||| |  |||||| |||    
T  34667162 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccggcctaacaatttcggcattttgccag 34667063  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  34667062 ttgagctaggacttctggat 34667043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 5887686 - 5887569
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||| ||||||||||||||||||||||| |||  || ||||||||  |||||||||  ||||||| ||| ||  |||||||   ||| |||||  |||    
T  5887686 gaaatgataaagccattataaactcacacatataagtggaggtaccagagttcgaaccctggtcatgacatccggcctaacaa---tgacattttaccag 5887590  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||||||| |||||||||||    
T  5887589 ttgagttaggacttctggata 5887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 40592381 - 40592311
Alignment:
Q  230 ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    |||||||| |||||||||||| ||| |||||||||| |  |||||| |||||||| ||| |||||||||||    
T  40592381 ttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccagttgagctaggacttctggata 40592311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 433180 - 433135
Alignment:
Q  256 ctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||    
T  433180 ctaacaatttcgacattttgtcagttgagttaggacttctggatat 433135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 7315763 - 7315804
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacata 214  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  7315763 agatagatgaaatggtaaagctattataaactcacacacata 7315804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 11061500 - 11061380
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||    | ||||| ||  | |||||||| |||||||| ||| ||  |||||||||| || ||||| ||||    
T  11061500 gaaatggcaaagccattataaactcacacacactagtaaaggtgccggggttcgaaccccggtcatg-catccggcctaacaatttcgacattttatcag 11061402  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||||||| ||||||| ||||    
T  11061401 ttgagttaggacttctgaatat 11061380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 12541354 - 12541431
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||||||||||||||||||||| |  |||||||||| | ||||||||| || ||||| ||| ||| ||||||||||    
T  12541354 aaagccattataaactcacacacacaagtgaaggtaccgaggttcgaaccccgatcatgacatccgacctaacaattt 12541431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 32023371 - 32023251
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||||||||||||| |||||||||| |  || ||| |||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||    
T  32023371 gaaatggcaaagccattataaaactcacacacacaagtggaggcaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcca 32023272  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||| ||| ||||||||||    
T  32023271 gttgagctaggacttctggat 32023251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 41164650 - 41164778
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtac-catgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  ||||||||||||||||||||||||||  |  ||||||    ||||||||| ||||||||  || ||  |||||||||| || |     
T  41164650 agatagatgaaatgacaaagccattataaactcacacacataagtagaggtactggggttcgaaccccggtcatgatatccggcctaacaatttcgacac 41164749  T
Q  272 tttgtcagttgagttagaacttctggata 300  Q
    |||| |||||||| ||| |||||||||||    
T  41164750 tttgccagttgagctaggacttctggata 41164778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 43035558 - 43035438
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||||||||||||||||||||||||||||| |  |  |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||| ||     
T  43035558 gaaatggtaaagccattataaactcacacacacaagtagaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggtattttgccaa 43035459  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  43035458 ttgagctaggacttctggata 43035438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 43461352 - 43461460
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||||||| ||    
T  43461352 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccagttgagcta 43461451  T
Q  288 gaacttctg 296  Q
    | |||||||    
T  43461452 ggacttctg 43461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 18251443 - 18251377
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaatttt--gtcagttgagttagaactt 293  Q
    ||||||||| || |||||||||||| |||||||||||||  |||||  |||||||||||||| ||||    
T  18251443 gttcgaaccccgatcatggcattcggtctaacaattttggcatttttggtcagttgagttaggactt 18251377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 23080108 - 23080227
Alignment:
Q  182 aaatggtaaagccattat-aaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||| ||||||||||| ||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  23080108 aaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 23080207  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  23080208 ttgagctaggacttctggat 23080227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 30854759 - 30854866
Alignment:
Q  195 attataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaact 292  Q
    |||||||||||||||||| |  ||||||||||   |||||| || |||||||| ||||||  |||||||||| || | |||| ||||||||||||| |||    
T  30854759 attataaactcacacacacaagtgaaggtaccggggttcgagccccggtcatgacattcgtcctaacaatttcgacatttttatcagttgagttaggact 30854858  T
Q  293 tctggata 300  Q
    | ||||||    
T  30854859 tgtggata 30854866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 42007274 - 42007345
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    ||||||||| |||||||||||| ||  |||||||||| || |||||  |||||||| ||| |||||||||||    
T  42007274 gttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccagttgagctaggacttctggata 42007345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 6591001 - 6590968
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  6591001 gaaatggtaaaaccattataaactcacacacata 6590968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 11543809 - 11543894
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||| |||| || ||||||||| ||| ||||||||||    
T  11543809 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcaaaccccgatcatggcatccgacctaacaattt 11543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 19593641 - 19593608
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||||| ||||||||||||||||||||||||||    
T  19593641 gaaatggcaaagccattataaactcacacacata 19593608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 36755066 - 36754997
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggca 249  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||    
T  36755066 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggca 36754997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 38490409 - 38490530
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||| ||||||||| |||||||||| |  || |||||||  | |||||||| | |||||||||| ||  |||||||||| |  |||||| ||    
T  38490409 gaaatggcaaagtcattataaaactcacacacacaagtggaggtaccggggttcgaaccccagtcatggcatccggcctaacaatttcggcattttgcca 38490508  T
Q  279 gttgagttagaacttctggata 300  Q
    |||||| ||| |||||||||||    
T  38490509 gttgagctaggacttctggata 38490530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 12847041 - 12847085
Alignment:
Q  256 ctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||    
T  12847041 ctaacaattttggtattttaccagttgagttagaacttctggata 12847085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 18999383 - 18999327
Alignment:
Q  244 atggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    ||||||| ||| |||||||||| |  |||||| |||||||||||| |||||||||||    
T  18999383 atggcatccgacctaacaatttcggcattttgccagttgagttaggacttctggata 18999327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 38082918 - 38082950
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacat 213  Q
    |||||||||||| ||||||||||||||||||||    
T  38082918 gaaatggtaaagtcattataaactcacacacat 38082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 29510662 - 29510781
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||||||| ||||||||||||||||||| |  || | |||||| | |||||||| |||||||| ||| ||||||||||||||||  |||||| ||||    
T  29510662 aaatggtaaagtcattataaactcacacacacaagtggaagtaccaaggttcgaaccccggtcatgacatccgatctaacaattttggcattttgacagt 29510761  T
Q  281 tgagttagaacttctggata 300  Q
    |||||||| |||||||||||    
T  29510762 tgagttaggacttctggata 29510781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 25820960 - 25821079
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| || ||||| ||||    
T  25820960 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcgacattttatcag 25821059  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  25821060 ttgagctaggacttctggat 25821079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 43676034 - 43676153
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  43676034 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 43676133  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  43676134 ttgagctaggacttctggat 43676153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 40958584 - 40958706
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  40958584 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 40958683  T
Q  280 ttgagttagaacttctggatatc 302  Q
    ||||| ||| |||||||||||||    
T  40958684 ttgagctaggacttctggatatc 40958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 19338188 - 19338309
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  19338188 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 19338287  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  19338288 ttgagctaggacttctggatat 19338309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 48392074 - 48391953
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   |||||||||  ||||||||||| ||  |||||||||| |  |||||| |||    
T  48392074 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccctggtcatggcatccggcctaacaatttcggcattttgccag 48391975  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  48391974 ttgagctaggacttctggatat 48391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 50248147 - 50248027
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||| |  | ||||||||||||||||| ||| ||  |||||||||| || ||||| ||||    
T  50248147 gaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaacctcggtcatgacatccggcctaacaatttcgacattttatcag 50248048  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  50248047 ttgagctaggacttctggata 50248027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 29005206 - 29005088
Alignment:
Q  183 aatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 281  Q
    ||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||    
T  29005206 aatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagtt 29005107  T
Q  282 gagttagaacttctggata 300  Q
    ||| ||| |||||||||||    
T  29005106 gagctaggacttctggata 29005088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 39787663 - 39787780
Alignment:
Q  184 atggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttg 282  Q
    |||| |||| ||||||||||||||||| |||  || |||||||   ||||||||| ||||||||||||||| ||||||||||| || |||||  ||||||    
T  39787663 atggcaaagtcattataaactcacacatataagtggaggtaccggagttcgaaccccggtcatggcattcggtctaacaatttcgacattttaccagttg 39787762  T
Q  283 agttagaacttctggata 300  Q
    || ||| |||| ||||||    
T  39787763 agctaggacttgtggata 39787780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 40685647 - 40685527
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||| |||||| |  || ||||| |   ||||||||| |||||||| ||| ||| |||||||||| || |||||| |||    
T  40685647 gaaatggcaaagccattataaactctcacacacaaatggaggtatcggagttcgaaccccggtcatgacatccgacctaacaatttcgacattttgccag 40685548  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  40685547 ttgagctaggacttctggata 40685527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 12282732 - 12282613
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||| |||||||||||||||| |||||||||  || |||||||  ||||||||| |||||||||||| |   |||||||||| || | ||| |||||    
T  12282732 gaaatggcaaagccattataaacttacacacataagtggaggtaccgagttcgaaccccggtcatggcatccagcctaacaatttcgacactttatcagt 12282633  T
Q  281 tgagttagaacttctggata 300  Q
    |||  ||| |||||| ||||    
T  12282632 tgaactaggacttctagata 12282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 10635608 - 10635486
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||||||||||||| |||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||    
T  10635608 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcca 10635509  T
Q  279 gttgagttagaacttctggatat 301  Q
    |||||| ||| ||||||||||||    
T  10635508 gttgagctaggacttctggatat 10635486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 293
Target Start/End: Original strand, 11797428 - 11797522
Alignment:
Q  200 aaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 293  Q
    |||||||||||||||  || |||||||| |||||||| | |||||||| ||||||  |||||||||| || |||||| |||||||||||| ||||    
T  11797428 aaactcacacacataagtggaggtaccaatgttcgaatcccggtcatgacattcggcctaacaatttcgacattttgccagttgagttaggactt 11797522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 32533931 - 32533825
Alignment:
Q  195 attataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 293  Q
    ||||||||||||||||||||  || ||||||||  ||||||||  || | ||||||||||  ||||||||||||  |||||| |||||||  ||||||||    
T  32533931 attataaactcacacacataagtggaggtaccagagttcgaactccgattatggcattcggcctaacaattttggcattttgccagttgaactagaactt 32533832  T
Q  294 ctggata 300  Q
    |||||||    
T  32533831 ctggata 32533825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 35758393 - 35758323
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcat 250  Q
    ||||||||||||||||||||||||||||||||||  || |||||||   ||||||||| ||||||||||||    
T  35758393 gaaatggtaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcat 35758323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 40503706 - 40503596
Alignment:
Q  190 aagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 288  Q
    ||||||||||| |||||||||||||  || || ||||| | ||||||||| | ||||| ||| ||  ||||||||||  | ||||||||||||||| |||    
T  40503706 aagccattatatactcacacacataagtggagttaccaggattcgaaccttgatcatgacatccggcctaacaatttcaacattttgtcagttgagctag 40503607  T
Q  289 aacttctggat 299  Q
    |||||||||||    
T  40503606 aacttctggat 40503596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 48314284 - 48314166
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||||||||||||||||| ||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| ||||    
T  48314284 aaatggtaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccagt 48314185  T
Q  281 tgagttagaacttctggat 299  Q
    |||| ||| ||||||||||    
T  48314184 tgagctaggacttctggat 48314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 15104162 - 15104041
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  |  ||||| |   ||||||||| || ||||| ||| ||  ||||||||||||  ||||||||||    
T  15104162 gaaatggcaaagccattataaactcacacacataagtagaggtatcggggttcgaaccccgatcatgacatccggcctaacaattttggcattttgtcag 15104063  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| |||||| |||||    
T  15104062 ttgagctaggacttctagatat 15104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 15906177 - 15906298
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||||||||||||||||||||||||||||||  || |||||||   |||||||||  | |||||||||  |  |||||||||| |  ||||||  ||    
T  15906177 gaaatggtaaagccattataaactcacacacataagtggaggtaccggggttcgaaccctgatcatggcatctggcctaacaatttcggcattttgctag 15906276  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  15906277 ttgagctaggacttctggatat 15906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 20164083 - 20164187
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  20164083 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 20164182  T
Q  280 ttgag 284  Q
    |||||    
T  20164183 ttgag 20164187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 24119774 - 24119658
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||| ||||||||||||||||||||  || || |||||  ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  24119774 gaaatggcaaagctattataaactcacacacataagtggagataccagggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 24119675  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  24119674 ttgagctaggacttctg 24119658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 34010220 - 34010092
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| ||| |||||||||||||||||||| |  || |||||||   |||| |||| || ||||||||| ||  |||||||||| || ||    
T  34010220 agatagatgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcaaaccccgatcatggcatccggcctaacaatttcgacat 34010121  T
Q  272 tttgtcagttgagttagaacttctggata 300  Q
    |||| |||||||| ||  |||||||||||    
T  34010120 tttgccagttgagctaagacttctggata 34010092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 1576480 - 1576385
Alignment:
Q  193 ccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||||||||||||||||||||  || ||||| |   ||||||||| |||||||||||| ||||| ||||||||||  |||||  |||||||||||    
T  1576480 ccattataaactcacacacataagtggaggtaacggagttcgaaccccggtcatggcatccgatcaaacaattttggcatttttccagttgagtta 1576385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 27078666 - 27078548
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||| |||| |||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| || |||||| |||    
T  27078666 gaaatggcaaaaccatcataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcgacattttg-cag 27078568  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||||| ||||||||    
T  27078567 ttgagctagaatttctggat 27078548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 36586377 - 36586250
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||| ||||| ||  |||||||||| || ||    
T  36586377 agatagatgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcacggcatccggcctaacaatttcgacat 36586278  T
Q  272 tttgtcagttgagttagaacttctggat 299  Q
    |||  |||||||||||| |||| |||||    
T  36586277 tttaccagttgagttaggacttgtggat 36586250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 23225300 - 23225394
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 274  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||  | |||||||| | |||||||||| ||| ||||||||||||| |||||    
T  23225300 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaacccctgtcatggcatccgacctaacaattttgacatttt 23225394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 33845614 - 33845724
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| || ||||||||||| |  |||||| |||    
T  33845614 gaaatggcaaagccattataaactcacacacacaattggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcggcattttgccag 33845713  T
Q  280 ttgagttagaa 290  Q
    ||||| |||||    
T  33845714 ttgagctagaa 33845724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 33948364 - 33948254
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| || ||||||||||| |  |||||| |||    
T  33948364 gaaatggcaaagccattataaactcacacacacaattggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcggcattttgccag 33948265  T
Q  280 ttgagttagaa 290  Q
    ||||| |||||    
T  33948264 ttgagctagaa 33948254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 43026009 - 43025883
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacc-----tgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 274  Q
    ||||||| |||||||||||||||||||||||| | |     || ||||||  | |||||||||  ||||||||||| ||  |||||||||| || |||||    
T  43026009 gaaatggcaaagccattataaactcacacacacaacacaagtggaggtactgaagttcgaacccaggtcatggcatccggcctaacaatttcgatatttt 43025910  T
Q  275 gtcagttgagttagaacttctggatat 301  Q
    |||||||||  ||| ||||||||||||    
T  43025909 gtcagttgaactaggacttctggatat 43025883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 21522435 - 21522350
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| ||||| |||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||| ||||||||||    
T  21522435 gaaatggaaaagcaattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaattt 21522350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 301
Target Start/End: Original strand, 32880597 - 32880710
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || ||||| |  | |||||||| | |||||||||| ||  |||||||||| |  |||||| |||||||||||    
T  32880597 aaagccattataaactcacacacacaagtggaggtagcggggttcgaaccccagtcatggcatccggcctaacaatttcggcattttgccagttgagtta 32880696  T
Q  288 gaacttctggatat 301  Q
    | |||||| |||||    
T  32880697 ggacttctagatat 32880710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 33132738 - 33132859
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    ||||||| |||||| ||||| | ||||||||||||||| | |  || |||||   | |||||||| ||| |||||| || ||| ||||||||||||| ||    
T  33132738 agataggcgaaatgataaagtcgttataaactcacacataaaagtggaggtattgaggttcgaacttcgatcatggtatccgacctaacaattttgatat 33132837  T
Q  272 tttgtcagttgagttagaactt 293  Q
    |||| |||||||||||| ||||    
T  33132838 tttgccagttgagttaggactt 33132859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 4126693 - 4126573
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   |||||||||  | ||||||||| ||  ||||||||||    ||||||||||    
T  4126693 gaaatggcaaaggcattataaactcacacacacaagtggaggtaccggggttcgaaccctgatcatggcatccggcctaacaatttccgcattttgtcag 4126594  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  4126593 ttgagctaggacttctggata 4126573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 5598411 - 5598300
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| ||| |||||||||| |  |||||  |||||||| ||    
T  5598411 aaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccgacctaacaatttcggcatttttccagttgagcta 5598312  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  5598311 ggacttctggat 5598300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 43086489 - 43086600
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  43086489 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccagttgagcta 43086588  T
Q  288 gaacttctggat 299  Q
    | |||| |||||    
T  43086589 ggacttatggat 43086600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 49948351 - 49948240
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  || ||||||   | |||||| | |||||||||||| ||  |||||||||| || |||||| |||||||| ||    
T  49948351 aaagtcattataaactcacacacacaagtggaggtactggggttcgaatcccggtcatggcatccggcctaacaatttcgacattttgccagttgagcta 49948252  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  49948251 ggacttctggat 49948240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 10430349 - 10430479
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 278  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||||||  ||||||||| | ||||| |||| ||  ||||||||||  | | ||||||||    
T  10430349 gaaatggcaaaggcattataaactcacacacacaagtggaggtaccagggttcgaaccccagtcattgcatccggcctaacaatttcggcatttttgtca 10430448  T
Q  279 gttgagttagaacttctggatatcattaaca 309  Q
    |||||| ||| |||| | ||||| |||||||    
T  10430449 gttgagctaggacttgtcgatataattaaca 10430479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 15331080 - 15331157
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||| ||||||||||||||| ||| |  || |||||||  | ||||||||||||||||||||| ||| ||||||||||    
T  15331080 aaagtcattataaactcacatacacaagtggaggtaccggggttcgaacctcggtcatggcatccgacctaacaattt 15331157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 16261217 - 16261176
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacata 214  Q
    |||||| ||||||| |||||| ||||||||||||||||||||    
T  16261217 agatagatgaaatgataaagctattataaactcacacacata 16261176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 47429610 - 47429687
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||||||||||||||||||||||  || |||||||  | |||||||| || ||||||||| ||  ||||||||||    
T  47429610 aaagccattataaactcacacacataagtggaggtaccgggattcgaaccccgatcatggcatccggcctaacaattt 47429687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 5511889 - 5511781
Alignment:
Q  193 ccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 291  Q
    |||||||||||||||| |||||  || ||||||| | ||||||||| |  |||||||||||   |||||||||| || ||||| |||||| | |||  ||    
T  5511889 ccattataaactcacatacataaatggaggtaccgaagttcgaaccccaatcatggcattcagcctaacaatttcgacattttatcagtttaattaagac 5511790  T
Q  292 ttctggata 300  Q
    |||||||||    
T  5511789 ttctggata 5511781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 17068258 - 17068150
Alignment:
Q  193 ccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 291  Q
    |||||||||||||||||||| |  || |||||||  | |||||||| || ||||||||| ||  |||||||||| |  |||||  |||||||| ||| ||    
T  17068258 ccattataaactcacacacacaagtggaggtaccggggttcgaaccccgctcatggcatccggcctaacaatttcggcattttaccagttgagctaggac 17068159  T
Q  292 ttctggata 300  Q
    |||||||||    
T  17068158 ttctggata 17068150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 30455260 - 30455200
Alignment:
Q  242 tcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatatc 302  Q
    ||||||||| ||  |||||||||| || ||||| ||||||||| ||| |||||||||||||    
T  30455260 tcatggcatccggcctaacaatttcgacattttatcagttgagctaggacttctggatatc 30455200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 43500153 - 43500257
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||| ||| |  || ||||||||  ||| ||||| || |||| |||| ||| |||||||||| || |||||  |||    
T  43500153 gaaatggcaaagccattataaactcacatacacaaatggaggtaccagagtttgaaccccgatcatagcatccgacctaacaatttcgacattttaccag 43500252  T
Q  280 ttgag 284  Q
    |||||    
T  43500253 ttgag 43500257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 4069118 - 4069248
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  ||    
T  4069118 agataggcgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggtat 4069217  T
Q  272 tttgtcagttgagttagaacttctggatatc 302  Q
    |||| |||||||||||| |||||||||||||    
T  4069218 tttgccagttgagttaggacttctggatatc 4069248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 38261111 - 38261003
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| |||||||||||||||||||||  |||||||| ||| ||| |||||||||||||||||| ||  |||||||||| || ||||||||||||||| ||    
T  38261111 aaagtcattataaactcacacacataagtgaaggtatccaggttagaacctcggtcatggcatccggcctaacaatttcgacattttgtcagttgagcta 38261012  T
Q  288 gaacttctg 296  Q
    | |||||||    
T  38261011 ggacttctg 38261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 48612635 - 48612516
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  48612635 gaaatggcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 48612536  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  48612535 ttgagctaggacttctggat 48612516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 3497527 - 3497647
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  3497527 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 3497626  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  3497627 ttgagctaggacttctggata 3497647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 40013382 - 40013260
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 278  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||||||||||||||||||| ||  ||||||||||  | | ||||||||    
T  40013382 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggcatttttgtca 40013283  T
Q  279 gttgagttagaacttctggatat 301  Q
    |||||| ||| ||||||||||||    
T  40013282 gttgagctaggacttctggatat 40013260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 18945050 - 18944921
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| ||||||||||||||||||||||||||  || ||||||||  ||||||||| ||||||||  || ||  |||||||||| |  ||    
T  18945050 agatagatgaaatggcaaagccattataaactcacacacataagtggaggtaccagggttcgaaccccggtcatgatatccggcctaacaatttcggcat 18944951  T
Q  272 tttgtcagttgagttagaacttctggatat 301  Q
    |||| |||||||  ||| ||||||||||||    
T  18944950 tttgccagttgaactaggacttctggatat 18944921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 35157094 - 35157215
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  35157094 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 35157193  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  35157194 ttgagctaggacttctggatat 35157215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 47086310 - 47086431
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 278  Q
    ||||||||||||||||||||||||||||||||||  || ||||| ||  ||||||||| || ||||||||| ||  |||||||||| || | ||||||||    
T  47086310 gaaatggtaaagccattataaactcacacacataagtggaggtaacagggttcgaaccccgatcatggcatccggcctaacaatttcgacatttttgtca 47086409  T
Q  279 gttgagttagaacttctggata 300  Q
    |||||| ||| |||| ||||||    
T  47086410 gttgagctaggacttatggata 47086431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 4106680 - 4106552
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||    
T  4106680 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcat 4106581  T
Q  272 tttgtcagttgagttagaacttctggata 300  Q
    |||  |||||||| ||| |||||||||||    
T  4106580 tttaccagttgagctaggacttctggata 4106552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 4887523 - 4887643
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || | ||| || | ||||||||||||||||||||| ||  |||||||||| |  |||||| |||    
T  4887523 gaaatggcaaagccattataaactcacacacacaagtggatgtatcagggttcgaacctcggtcatggcatccggcctaacaatttcggcattttgccag 4887622  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  4887623 ttgagctaggacttctggata 4887643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 7264523 - 7264415
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| |||||||||||||||||||||  || |||||||  | |||||||||||||||| |||| ||| || ||||||| |  ||||||||||    
T  7264523 gaaatggcaaagtcattataaactcacacacataagtggaggtaccgagattcgaacctcggtcatagcatccgacctcacaatttcggcattttgtcag 7264424  T
Q  280 ttgagttag 288  Q
    |||||||||    
T  7264423 ttgagttag 7264415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 37117863 - 37117975
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || || ||||| | |||||||| || ||||||||| ||| ||||||||||  | ||||||||||||||| ||    
T  37117863 aaagccattataaactcacacacacaagtggagttaccaggattcgaaccccgatcatggcatccgacctaacaatttcaacattttgtcagttgagcta 37117962  T
Q  288 gaacttctggata 300  Q
    | |||||||||||    
T  37117963 ggacttctggata 37117975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 6327329 - 6327210
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || | |||||  | |||||||| |||||||||||| ||  |||||||||||   ||||||||||    
T  6327329 gaaatggcaaagtcattataaactcacacacacaagtggatgtaccggggttcgaaccccggtcatggcatccggcctaacaatttttgcattttgtcag 6327230  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||| ||||||||||    
T  6327229 ttgagttaggacttctggat 6327210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 31717415 - 31717296
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  31717415 gaaatggcaaagccattataaactcacacacataagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 31717316  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  31717315 ttgagctaggacttctggat 31717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 6596666 - 6596537
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg---ttcgaacctcggtcatggcattcgatctaacaattttgaa 269  Q
    |||||| |||||||| |||||||||||||| |||||||  ||  |||||||||  ||   |||||||| |||||||||||| ||  ||||||||||||      
T  6596666 agatagttgaaatggcaaagccattataaattcacaca--taagtgaaggtac--tggaattcgaaccccggtcatggcatccggcctaacaattttggc 6596571  T
Q  270 attttgtcagttgagttagaacttctggatatca 303  Q
    |||||| |||||||| ||| ||||||||||||||    
T  6596570 attttgccagttgagctaggacttctggatatca 6596537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 26795032 - 26794909
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 277  Q
    ||||||| ||| ||||||||||||||||||||||    || |||||||   ||||||||| |||||||||||| ||||||||||||||||  |||||| |    
T  26795032 gaaatggcaaaaccattataaactcacacacatataagtggaggtaccggagttcgaaccccggtcatggcatccgatctaacaattttggcattttgcc 26794933  T
Q  278 agttgagttagaacttctggatat 301  Q
     |||||| ||| |||| |||||||    
T  26794932 ggttgagctaggacttgtggatat 26794909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 47584693 - 47584801
Alignment:
Q  193 ccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 291  Q
    ||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||| | || |||||| |||||||| ||| ||    
T  47584693 ccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatgtcgacattttgccagttgagctaggac 47584792  T
Q  292 ttctggata 300  Q
    |||||||||    
T  47584793 ttctggata 47584801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 1573852 - 1573971
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||||||||||||||||||| ||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||  ||||    
T  1573852 aaatggtaaagccattataaacttacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccagt 1573951  T
Q  281 tgagttagaacttctggata 300  Q
    |||| ||| |||||||||||    
T  1573952 tgagctaggacttctggata 1573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 5523903 - 5523792
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||||||||||| ||||||| ||||  || ||||| || | |||||||| |||||||||||| ||| |||||||||| || ||||| | |||||||| |    
T  5523903 aaagccattataatctcacacgcataagtggaggtatcaggattcgaaccccggtcatggcatccgacctaacaatttcgacattttattagttgagtca 5523804  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  5523803 ggacttctggat 5523792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 10061026 - 10061145
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  10061026 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgggattcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 10061125  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| |||| |||||    
T  10061126 ttgagctaggacttgtggat 10061145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 21226191 - 21226070
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||    
T  21226191 agatagatgaaatggcaaagacattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcat 21226092  T
Q  272 tttgtcagttgagttagaactt 293  Q
    |||| |||||||| ||| ||||    
T  21226091 tttgccagttgagataggactt 21226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 6369645 - 6369533
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||||||||||||||||||||||||||||||  || ||||| |  | | ||||| || ||||| ||| ||  |||||||||| |  |||||  ||||    
T  6369645 gaaatggtaaagccattataaactcacacacataagtggaggtatcggggttgaaccacgatcatgacatccggcctaacaatttcggcattttaccagt 6369546  T
Q  281 tgagttagaactt 293  Q
    |||||||||||||    
T  6369545 tgagttagaactt 6369533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 6378110 - 6377998
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||||||||||||||||||||||||||||||  || ||||| |  | | ||||| || ||||| ||| ||  |||||||||| |  |||||  ||||    
T  6378110 gaaatggtaaagccattataaactcacacacataagtggaggtatcggggttgaaccacgatcatgacatccggcctaacaatttcggcattttaccagt 6378011  T
Q  281 tgagttagaactt 293  Q
    |||||||||||||    
T  6378010 tgagttagaactt 6377998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 7312463 - 7312579
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||||||||||| ||||||| ||||||||| |  || |||||||  | |||||||| |||||||| ||| ||  ||||||||||||  |||||| |||    
T  7312463 gaaatggtaaagccgttataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattttgccag 7312562  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  7312563 ttgagctaggacttctg 7312579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 29151701 - 29151581
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||||||||||||||||||||||||||||| |  || |||||||   ||||||||| || |||| |||| ||  ||||||||||    |||||| |||    
T  29151701 gaaatggtaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcagcattttgccag 29151602  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  29151601 ttgagctaggacttctggata 29151581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 37920080 - 37919972
Alignment:
Q  188 taaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtt 286  Q
    |||||||||||||||||||||||||||  || |||||||   ||||||| |  |||||||||||  || |||||||||| || |||||| |||||||| |    
T  37920080 taaagccattataaactcacacacataagtggaggtaccggggttcgaatccaggtcatggcatctgacctaacaatttcgatattttgccagttgagct 37919981  T
Q  287 agaacttct 295  Q
    || ||||||    
T  37919980 aggacttct 37919972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 41780365 - 41780260
Alignment:
Q  195 attataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 293  Q
    ||||||||||||||||||  | || |||||||| | |||||||| |||||||| ||| | | |||||||||| || ||||||  ||||||||||| ||||    
T  41780365 attataaactcacacaca--cgtggaggtaccagggttcgaaccccggtcatgacatccaacctaacaatttcgacattttgctagttgagttaggactt 41780268  T
Q  294 ctggatat 301  Q
    ||||||||    
T  41780267 ctggatat 41780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 990332 - 990229
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| |||||||||||||||||||| |||||  || ||||||||  ||||||||| || |||| |||| ||  ||||||||||||  ||| |||||||    
T  990332 aaatggcaaagccattataaactcacaaacataagtggaggtaccagggttcgaaccccgatcatagcatccggcctaacaattttgccattatgtcagt 990233  T
Q  281 tgag 284  Q
    ||||    
T  990232 tgag 990229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 10422588 - 10422477
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||| |||||||||||||||||| |  || |||||||  | |||||||| || ||||||||| ||| |||||||||| || |||||| |||||||| ||    
T  10422588 aaagcaattataaactcacacacacaagtggaggtaccgggattcgaaccccgatcatggcatccgacctaacaatttcgatattttgccagttgagcta 10422489  T
Q  288 gaacttctggat 299  Q
      ||||||||||    
T  10422488 agacttctggat 10422477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 16816809 - 16816706
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  16816809 gaaatggcaaagccattataaactcacacacacaagtggaggtaccgcggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 16816710  T
Q  280 ttga 283  Q
    ||||    
T  16816709 ttga 16816706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 33628154 - 33628027
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  ||| |||||||||||||||||||| |  || ||||||||  |||||||||  ||||||||||| ||   ||||||||| |  |     
T  33628154 agatagatgaaatgacaaaaccattataaactcacacacacaagtggaggtaccagggttcgaaccctggtcatggcatccggcttaacaatttcggcac 33628055  T
Q  272 tttgtcagttgagttagaacttctggat 299  Q
    ||||||||||||| ||| ||||||||||    
T  33628054 tttgtcagttgagctaggacttctggat 33628027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 45041743 - 45041862
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||| ||||| ||| |||||||||| |  |||||| |||    
T  45041743 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcaaggcatccgacctaacaatttcggcattttgccag 45041842  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||  ||||||||||    
T  45041843 ttgagctaagacttctggat 45041862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 4227452 - 4227367
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||| ||||||||||    
T  4227452 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccgacctaacaattt 4227367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 19258542 - 19258457
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  19258542 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 19258457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 43133105 - 43133198
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| |||||   ||||||||||    
T  43133105 agataggcgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcagcctaacaattt 43133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 5508803 - 5508699
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||| ||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  5508803 gaaatggcaaagccattacaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 5508704  T
Q  280 ttgag 284  Q
    |||||    
T  5508703 ttgag 5508699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 11074952 - 11075055
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc--atgttcgaacctcggtcatggcattc-gatctaacaattttgaaattttgtc 277  Q
    ||||||| |||||||||||||||||||| |||||  ||||||||||  || |||||||  || ||||||  ||| || ||||||||||||| ||||||||    
T  11074952 gaaatggcaaagccattataaactcacatacataagtgaaggtaccggat-ttcgaactccgatcatgg--ttctgacctaacaattttgatattttgtc 11075048  T
Q  278 agttgag 284  Q
    |||||||    
T  11075049 agttgag 11075055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 17895744 - 17895632
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    |||||| |||||||| ||    
T  17895744 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcagcattttgccagttgagcta 17895645  T
Q  288 gaacttctggata 300  Q
    | ||||| |||||    
T  17895644 ggacttcaggata 17895632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 1869934 - 1869851
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaat 263  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||    
T  1869934 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaat 1869851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 3861346 - 3861465
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| || |||||| |||    
T  3861346 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgacattttgccag 3861445  T
Q  280 ttgagttagaacttctggat 299  Q
    || |  ||| ||||||||||    
T  3861446 ttaaactaggacttctggat 3861465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 9380060 - 9379989
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    ||||||||| |||||||| ||| ||  |||||||||| || |||||| |||||||| ||| |||||||||||    
T  9380060 gttcgaaccccggtcatgacatccggcctaacaatttcgacattttgccagttgagctaggacttctggata 9379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 10166979 - 10166873
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||| ||| |  || ||||||||  ||||||||| |||||||||||| ||  |||||||||| |  ||||| ||||||||| ||    
T  10166979 aaagccattataaactcacatacacaagtggaggtaccagagttcgaacc-cggtcatggcatccggcctaacaatttcggcattttatcagttgagcta 10166881  T
Q  288 gaacttct 295  Q
    | ||||||    
T  10166880 ggacttct 10166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 33228769 - 33228698
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaacttctggat 299  Q
    |||||||||||||||||||||| ||  |||||||||| || | ||||| |||||||| ||| ||||||||||    
T  33228769 gttcgaacctcggtcatggcatccggcctaacaatttcgacatttttgccagttgagctaggacttctggat 33228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 40656118 - 40656201
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaat 263  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||    
T  40656118 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaat 40656201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 40809163 - 40809044
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||||||  |||||||||  ||||||| ||| ||  ||||||| || |  |||||| |||    
T  40809163 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccagggttcgaaccctggtcatgacatccggcctaacaaattcggcattttgccag 40809064  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  40809063 ttgagctaggacttctggat 40809044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 45946820 - 45946705
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||||||| |||||||||||||| |  || ||||||| | ||||||||  | || ||||||| ||  |||| |||||||  ||||||||||||||| ||    
T  45946820 aaagccattgtaaactcacacacacaagtggaggtaccgaggttcgaactccagtaatggcatccggcctaataattttggcattttgtcagttgagcta 45946721  T
Q  288 gaacttctggatatca 303  Q
    | |||| |||||||||    
T  45946720 ggacttttggatatca 45946705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 46416667 - 46416548
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||| ||||||||||||||||||||||||||||  || ||||| |   |||||||  ||||||||||||| ||  |||||||| | |  |||||| |||    
T  46416667 gaaattgtaaagccattataaactcacacacataagtggaggtatcggagttcgaatttcggtcatggcatccggcctaacaatgtcggcattttgccag 46416568  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||  ||| ||||||||||    
T  46416567 ttgacctaggacttctggat 46416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 298
Target Start/End: Original strand, 27396324 - 27396442
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||   ||||||||| |  ||||||||| ||  |||||||||| |  |||||| |||    
T  27396324 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccaatcatggcatccggcctaacaatttcggcattttgccag 27396423  T
Q  280 ttgagttagaacttctgga 298  Q
    ||||| ||| |||||||||    
T  27396424 ttgagctaggacttctgga 27396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 28649376 - 28649461
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||| ||||| ||||||||||||||||||| |  || ||||||| | |||||||| ||| ||||| ||| ||| ||||||||||    
T  28649376 gaaatgataaagtcattataaactcacacacacaagtggaggtaccgaggttcgaacttcgatcatgacatccgacctaacaattt 28649461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 30627734 - 30627637
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgag 284  Q
    |||| |||| |||||||||||||| |  || |||||||  | ||||||||||| ||||| ||| |||||||||||||| || | ||||||||||||||    
T  30627734 aaagtcattgtaaactcacacacacaagtggaggtaccggggttcgaacctcgatcatgacatccgatctaacaatttcgacatttttgtcagttgag 30627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 40011999 - 40012068
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggca 249  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||    
T  40011999 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggca 40012068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 46715749 - 46715822
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtcagttgagttagaacttctggatat 301  Q
    ||||||||| ||||||||||||||   |||||||||| || | |||| ||||||||||||| |||||| |||||    
T  46715749 gttcgaaccccggtcatggcattctgcctaacaatttcgacatttttttcagttgagttaggacttctagatat 46715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 4674319 - 4674435
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||  ||  ||  ||||||||| |  |||||| |||    
T  4674319 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgatatctgacttaacaatttcggcattttgccag 4674418  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  4674419 ttgagctaggacttctg 4674435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 2596 - 2476
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| ||||||| |||| ||  |||||||||| || ||||||||||    
T  2596 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcgacattttgtcag 2497  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||||||  |||||||||||    
T  2496 ttgagttatgacttctggata 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 2596 - 2476
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| ||||||| |||| ||  |||||||||| || ||||||||||    
T  2596 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcgacattttgtcag 2497  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||||||  |||||||||||    
T  2496 ttgagttatgacttctggata 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 14285221 - 14285094
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||  |||||||||||| ||  ||||||||||||  ||    
T  14285221 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacgccggtcatggcatccggcctaacaattttggcat 14285122  T
Q  272 tttgtcagttgagttagaacttctggat 299  Q
    ||||||||||||| ||| ||||||||||    
T  14285121 tttgtcagttgagctaggacttctggat 14285094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 31263511 - 31263630
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| || ||||| ||||| || |||||| |||    
T  31263511 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggtctaataatttcgacattttgccag 31263610  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  31263611 ttgagctaggacttctggat 31263630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 7512885 - 7512765
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  ||||||||||||  |||||| |||    
T  7512885 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattttggcattttgccag 7512786  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  7512785 ttgagctaggacttctggata 7512765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 28983842 - 28983730
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| |||||||||||||||||||||  || |||||||   ||||||||| |||||||||||| ||| |||||||| | || |||||| |||||||| ||    
T  28983842 aaagtcattataaactcacacacataagtggaggtaccggagttcgaaccccggtcatggcatccgacctaacaatgtcgacattttgccagttgagcta 28983743  T
Q  288 gaacttctggata 300  Q
    |||||||||||||    
T  28983742 gaacttctggata 28983730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 49882719 - 49882838
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||||||||||||||||||||| ||  |||||||||| |  |||||| |||    
T  49882719 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggcattttgccag 49882818  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  49882819 ttgagctaggacttctggat 49882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 1052885 - 1052997
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| ||||||| ||||||||||||||||||||||| | |  || ||||||||  ||||||||| |||||||| ||| ||  |||||||||| || ||    
T  1052885 agatagatgaaatgataaagccattataaactcacacatacaagtggaggtaccagggttcgaaccccggtcatgacatccggcctaacaatttcgacat 1052984  T
Q  272 tttgtcagttgag 284  Q
    |||||||||||||    
T  1052985 tttgtcagttgag 1052997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 9569593 - 9569473
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  9569593 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 9569494  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  9569493 ttgagctaggacttctggata 9569473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 41323652 - 41323532
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||| |||||||  |||||||||||||||||| |  ||||||||||  | |||||||| |  |||| |||| |||||||||||||| || ||||| ||||    
T  41323652 gaaacggtaaagttattataaactcacacacagaagtgaaggtaccggggttcgaaccccaatcatagcatccgatctaacaatttcgacattttatcag 41323553  T
Q  280 ttgagttagaacttctggata 300  Q
    |||||||||||||||| ||||    
T  41323552 ttgagttagaacttcttgata 41323532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 49319849 - 49319729
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| || ||||||||||||||||||||| |   | |||||||| | |||||||| |||||||||||| ||  |||||||||| || ||||||| ||    
T  49319849 gaaatggcaacgccattataaactcacacacacaagcggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgttag 49319750  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  49319749 ttgagctaggacttctggata 49319729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 13389138 - 13389019
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||| ||||||||||    |||||| |||    
T  13389138 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcagcattttgccag 13389039  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  13389038 ttgagctaggacttctggat 13389019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 24712206 - 24712087
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||| |||||||||| |  |||||| |||    
T  24712206 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgccag 24712107  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  24712106 ttgagctaggacttctggat 24712087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 29894528 - 29894409
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||| |||||||||||||||||| |  || ||||||||  ||||||||| |||||||| ||| ||| |||| ||||| || |||||| |||    
T  29894528 gaaatggcaaagctattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccgacctaataatttcgacattttgccag 29894429  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  29894428 ttgagctaggacttctggat 29894409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 13632208 - 13632087
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttga-aattttgtca 278  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||   | ||||||||||||||||||||| ||  |||||||||| || | ||||| ||    
T  13632208 gaaatggcaaagccattataaactcacacacacaagtggaggtactggggttcgaacctcggtcatggcatccggcctaacaatttcgacatttttgcca 13632109  T
Q  279 gttgagttagaacttctggata 300  Q
    |||||| ||| |||||||||||    
T  13632108 gttgagctaggacttctggata 13632087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 35616011 - 35615890
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  ||||  ||||||||||||||||||||  || |||||||| | |||||||| |||||||| |||  |  |||||||||| || ||    
T  35616011 agatagatgaaatgacaaagttattataaactcacacacataagtggaggtaccaggattcgaaccccggtcatgacatctggcctaacaatttcgacat 35615912  T
Q  272 tttgtcagttgagttagaactt 293  Q
    |||||||||||||| |||||||    
T  35615911 tttgtcagttgagtcagaactt 35615890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 5396950 - 5397069
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  5396950 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 5397049  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  5397050 ttgagctaggacttctggat 5397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 5880345 - 5880412
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctg 296  Q
    ||||||||| |||||||||||| || ||||||||||| || |||||| |||||||||||| |||||||    
T  5880345 gttcgaaccccggtcatggcatccggtctaacaatttcgacattttgccagttgagttaggacttctg 5880412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 30044594 - 30044713
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  30044594 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 30044693  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  30044694 ttgagctaggacttctggat 30044713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 35318658 - 35318539
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||| ||||||||||||||||| || |  ||||||||||| | |||||||| ||||||||  || ||  |||||||||| |  |||||| |||    
T  35318658 gaaatggcaaaaccattataaactcacacgcacaagtgaaggtaccaggattcgaaccccggtcatgatatccggcctaacaatttcggcattttgccag 35318559  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||| ||||||||||    
T  35318558 ttgagttaggacttctggat 35318539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 298
Target Start/End: Original strand, 42411998 - 42412116
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| ||||||||||||  |  |||||||||| |  |||||| |||    
T  42411998 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatctggcctaacaatttcggcattttgccag 42412097  T
Q  280 ttgagttagaacttctgga 298  Q
    ||||| ||  |||||||||    
T  42412098 ttgagctatgacttctgga 42412116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 17271425 - 17271304
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    ||||||||||||| | ||||||||||||||||||||||||||  || |||||||   |||| |||| | ||||||||||| |  |||||||||| |  ||    
T  17271425 agataggtgaaattgcaaagccattataaactcacacacataagtggaggtaccggggttcaaaccccagtcatggcatttggcctaacaatttcggcat 17271326  T
Q  272 tttgtcagttgagttagaactt 293  Q
    |||||| |||||| ||| ||||    
T  17271325 tttgtccgttgagctaggactt 17271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 579252 - 579356
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| || ||||| ||||    
T  579252 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgacattttatcag 579351  T
Q  280 ttgag 284  Q
    |||||    
T  579352 ttgag 579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 12821281 - 12821164
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||    || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  12821281 gaaatggcaaagccattataaactcacacacaag--tggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 12821184  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  12821183 ttgagctaggacttctggat 12821164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 33416590 - 33416706
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  |||||||||  | ||||| ||| || ||||||||||| |  |||||| |||    
T  33416590 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccctgatcatgacatccggtctaacaatttcggtattttgccag 33416689  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  33416690 ttgagctaggacttctg 33416706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 39997783 - 39997887
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||||| | ||||||||| ||||||||| || ||  |||||||||| || ||||| ||||    
T  39997783 gaaatggcaaagtcattataaactcacacacacaagtggaggtaccgaggttcgaaccccggtcatggtatccggcctaacaatttcgacattttatcag 39997882  T
Q  280 ttgag 284  Q
    |||||    
T  39997883 ttgag 39997887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 42154147 - 42154267
Alignment:
Q  181 gaaatggtaaagccattat-aaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||||||||||||||| ||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| ||    
T  42154147 gaaatggtaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgcca 42154246  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||| ||| ||||||||||    
T  42154247 gttgagctaggacttctggat 42154267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 46488127 - 46488247
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||| ||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  46488127 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggtttgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 46488226  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  46488227 ttgagctaggacttctggata 46488247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 18813488 - 18813373
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||| | |||||||| ||| ||  |||||||||| |  |||||| |||    
T  18813488 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaagcccggtcatgacatccggcctaacaatttcggcattttgccag 18813389  T
Q  280 ttgagttagaacttct 295  Q
    ||||||||| ||||||    
T  18813388 ttgagttaggacttct 18813373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 23974652 - 23974771
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||  ||||||||  || ||  |||||||||| |  |||||| |||    
T  23974652 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaacaccggtcatgatatccggcctaacaatttcggcattttgccag 23974751  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  23974752 ttgagctaggacttctggat 23974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 24407605 - 24407502
Alignment:
Q  191 agccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttaga 289  Q
    |||||||||||| ||||||||| |  ||||||||||  | |||||| | |||||||||||| ||| |||||||||| || |||||| |||||||| |||     
T  24407605 agccattataaattcacacacacaagtgaaggtaccggggttcgaatcccggtcatggcatccgacctaacaatttcgacattttgccagttgagctagg 24407506  T
Q  290 actt 293  Q
    ||||    
T  24407505 actt 24407502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 28010053 - 28010180
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || || ||||   ||||||||| ||||||||  || |   ||||||||||||  ||    
T  28010053 agatagatgaaatggcaaagccattataaactcacacacacaagtggagttaccggggttcgaaccccggtcatgatatcctgcctaacaattttggcat 28010152  T
Q  272 tttgtcagttgagttagaacttctggat 299  Q
    |||| |||||||| ||| ||||||||||    
T  28010153 tttgccagttgagctaggacttctggat 28010180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 34684320 - 34684202
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  34684320 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 34684221  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  34684220 ttgagctag-acttctggat 34684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 48628474 - 48628561
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttg 267  Q
    ||||||| |||||||||||||||||||||||| |  ||||| ||||   ||||||||| | |||||||||| | ||||||||||||||    
T  48628474 gaaatggcaaagccattataaactcacacacacaaatgaagataccggggttcgaaccccagtcatggcatccaatctaacaattttg 48628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 54907902 - 54908017
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||| |||||||||  |||| |||||   |||| ||||||| ||||||||| ||  |||||||||| |  |||||| |||    
T  54907902 gaaatggcaaagccattataaacttacacacataaatgaatgtaccggggttcaaacctcgatcatggcatccggcctaacaatttcggcattttgccag 54908001  T
Q  280 ttgagttagaacttct 295  Q
    ||||| ||| ||||||    
T  54908002 ttgagctaggacttct 54908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 7944226 - 7944319
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||  ||||||||||    
T  7944226 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattt 7944319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 29428173 - 29428053
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||| |||| |  || |||||||  | |||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  29428173 gaaatggcaaagccattataaactcactcacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggtattttgccag 29428074  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  29428073 ttgagctaggacttctggata 29428053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 35828394 - 35828271
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacc--tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtc 277  Q
    ||||||| |||||||||||||| ||||||||| ||   || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |    
T  35828394 gaaatggcaaagccattataaattcacacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgcc 35828295  T
Q  278 agttgagttagaacttctggatat 301  Q
    ||||||| ||| ||||||| ||||    
T  35828294 agttgagctaggacttctgaatat 35828271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 37050819 - 37050715
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || || || |   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  37050819 gaaatggcaaagccattataaactcacacacataagtggagctatcggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 37050720  T
Q  280 ttgag 284  Q
    |||||    
T  37050719 ttgag 37050715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 47462054 - 47462166
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  47462054 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttgagcta 47462153  T
Q  288 gaacttctggata 300  Q
    | |||||| ||||    
T  47462154 ggacttctagata 47462166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 51675685 - 51675797
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||   ||||||||| ||||||||  || ||  |||||||||| || ||||||| ||||||| ||    
T  51675685 aaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccggtcatgatatccggcctaacaatttagatattttgttagttgagcta 51675784  T
Q  288 gaacttctggata 300  Q
    | |||| ||||||    
T  51675785 ggacttatggata 51675797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 12315932 - 12315971
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacaca 212  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  12315932 agatagatgaaatggcaaagccattataaactcacacaca 12315971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 18371456 - 18371349
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||||||||||||||||||||||||  || |||||||   |||| |||| | ||||||  |||||  |||||||||| |  |||||| |||||||| ||    
T  18371456 aaagccattataaactcacacacataagtggaggtaccggggttcaaaccccagtcatgatattcggcctaacaatttcggcattttgccagttgagcta 18371357  T
Q  288 gaacttct 295  Q
    ||||||||    
T  18371356 gaacttct 18371349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 24550931 - 24550812
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  24550931 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcattttgccag 24550832  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||  ||||||||||    
T  24550831 ttgagctaagacttctggat 24550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 31375223 - 31375112
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||| ||||||| |  || |||||||  | |||||||| ||||||||||||  |  |||| ||||| || |||||| |||||||||||    
T  31375223 aaagtcattataaacttacacacacaagtggaggtaccggggttcgaaccccggtcatggcatctggcctaataatttcgacattttggcagttgagtta 31375124  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  31375123 ggacttctggat 31375112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 32104012 - 32104051
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacaca 212  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  32104012 agatagatgaaatggcaaagccattataaactcacacaca 32104051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 54096958 - 54097065
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  || |||||||   |||||||| ||||||||| ||| |||||||| ||||| |  |||||| || ||||||||    
T  54096958 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaacgtcggtcatgacatccgatctaataatttcggcattttgccacttgagtta 54097057  T
Q  288 gaacttct 295  Q
    | ||||||    
T  54097058 gtacttct 54097065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 25586345 - 25586447
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    ||||||||||||||||||||||||||  || |||||||   ||||||||| || ||||||||| ||  |||||||||| |  ||||||  ||||||| ||    
T  25586345 aaagccattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgctagttgagcta 25586444  T
Q  288 gaa 290  Q
    |||    
T  25586445 gaa 25586447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 37166256 - 37166142
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||| ||| ||  |||||||||| |  |||||| |||    
T  37166256 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcattttgccag 37166157  T
Q  280 ttgagttagaacttc 294  Q
    ||||| ||| |||||    
T  37166156 ttgagctaggacttc 37166142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 939691 - 939586
Alignment:
Q  195 attataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 293  Q
    ||||||||||||||||||||  || ||||||| || |||||||| || | |||  ||    |||||| |||| || ||||||||||||||||||||||||    
T  939691 attataaactcacacacataagtggaggtaccgtggttcgaaccccgattatgatatcatgtctaacgatttcgacattttgtcagttgagttagaactt 939592  T
Q  294 ctggat 299  Q
     |||||    
T  939591 atggat 939586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 5060496 - 5060541
Alignment:
Q  256 ctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    |||||||||| || ||||| ||||||||||||| ||||||||||||    
T  5060496 ctaacaatttcgacattttatcagttgagttaggacttctggatat 5060541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 6328853 - 6328894
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacata 214  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||    
T  6328853 agataggcgaaatggcaaaaccattataaactcacacacata 6328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 11310186 - 11310219
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||| ||||||||||||||||||||||||||||    
T  11310186 gaaattgtaaagccattataaactcacacacata 11310219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 17846760 - 17846873
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||| ||||||||||||| |  || ||||||| | |||||||||||| |||| | || |   |||||||||| || |||||| |||    
T  17846760 gaaatggcaaagtcattagaaactcacacacacaagtggaggtaccgaggttcgaacctcgatcataggatccagcctaacaatttcgacattttgccag 17846859  T
Q  280 ttgagttagaactt 293  Q
    ||||| ||||||||    
T  17846860 ttgagctagaactt 17846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 31583613 - 31583646
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||||| ||||||||||||||||||||||||||    
T  31583613 gaaatggcaaagccattataaactcacacacata 31583646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 43173646 - 43173683
Alignment:
Q  253 gatctaacaattttgaaattttgtcagttgagttagaa 290  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  43173646 gatctaacaattttgatattttatcagttgagttagaa 43173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 55853337 - 55853370
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    |||| |||||||||||||||||||||||||||||    
T  55853337 gaaacggtaaagccattataaactcacacacata 55853370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 36752401 - 36752357
Alignment:
Q  256 ctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    |||||||||| |  ||||||||||||||||||| |||||||||||    
T  36752401 ctaacaatttcggcattttgtcagttgagttaggacttctggata 36752357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 54864506 - 54864398
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  |  ||||||| | |||| |||| || ||||||||| ||| ||||||||||||| ||||||  ||||||  ||    
T  54864506 aaagtcattataaactcacacacacaagttgaggtaccgaggttcaaaccccgatcatggcatccgacctaacaattttgacattttgctagttgatcta 54864407  T
Q  288 gaacttctg 296  Q
    | |||||||    
T  54864406 ggacttctg 54864398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 1068 - 1188
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  1068 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 1167  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  1168 ttgagctaggacttctggata 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 42448329 - 42448209
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  42448329 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 42448230  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  42448229 ttgagctaggacttctggata 42448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 23311183 - 23311302
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  23311183 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 23311282  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  23311283 ttgagctaggacttctggat 23311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 26802452 - 26802333
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  26802452 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 26802353  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||  ||||||||||    
T  26802352 ttgagttaagacttctggat 26802333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 26810002 - 26809883
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  26810002 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 26809903  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||  ||||||||||    
T  26809902 ttgagttaagacttctggat 26809883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 26825029 - 26824910
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||||||  ||||||||||||  |||||| |||    
T  26825029 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacattcggcctaacaattttggcattttgccag 26824930  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||  ||||||||||    
T  26824929 ttgagttaagacttctggat 26824910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 24652324 - 24652445
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||| || | |||||||||||| ||  |||||||||| || |||||| |||    
T  24652324 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcaaatcccggtcatggcatccggcctaacaatttcgacattttgccag 24652423  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||||||| ||||||||||||    
T  24652424 ttgagttaggacttctggatat 24652445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 25328314 - 25328435
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | ||||||||||||||||||||| ||  |||||||||| |  |||||| |||    
T  25328314 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggcattttgccag 25328413  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| |||||| |||||    
T  25328414 ttgagctaggacttctagatat 25328435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 11968894 - 11968774
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||| ||||| |  || ||||||   | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  11968894 gaaatggcaaagccattataaactcatacacacaagtggaggtactggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgacag 11968795  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||||||| |||||||||||    
T  11968794 ttgagttaggacttctggata 11968774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 27389937 - 27390041
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || ||||||| | ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  27389937 gaaatggcaaagccattataaactcacacacataagtggaggtaccgaggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 27390036  T
Q  280 ttgag 284  Q
    |||||    
T  27390037 ttgag 27390041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 29119724 - 29119608
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  29119724 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 29119625  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  29119624 ttgagctaggacttctg 29119608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 33028348 - 33028228
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||||||||||||||||||||||||||||||  || | |||||   ||||||||| |||||||| ||| ||  ||||||||||||  ||||||||||    
T  33028348 gaaatggtaaagccattataaactcacacacataagtggaagtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattttgtcag 33028249  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||  ||| |||||| ||||    
T  33028248 ttgaactaggacttcttgata 33028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 4617776 - 4617895
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||    
T  4617776 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccag 4617875  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  4617876 ttgagctaggacttctggat 4617895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 16496718 - 16496599
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||| |||    
T  16496718 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgccag 16496619  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||  ||| ||||||||||    
T  16496618 ttgaactaggacttctggat 16496599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 17869134 - 17869253
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||| |||||||||||  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  17869134 gaaatggcaaagccattataaattcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 17869233  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  17869234 ttgagctaggacttctggat 17869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 18115211 - 18115092
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||  | |||||| | |||||| || || ||  ||||||||||||| ||||||  ||    
T  18115211 gaaatggcaaagccattataaactcacacacataagtggaggtaccgggtttcgaatcccggtcacggtatccggcctaacaattttgacattttgctag 18115112  T
Q  280 ttgagttagaacttctggat 299  Q
    |||||||||||||| |||||    
T  18115111 ttgagttagaacttttggat 18115092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 36569397 - 36569278
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  36569397 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 36569298  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  36569297 ttgagctaggacttctggat 36569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 40044926 - 40045045
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||| | | ||||||||  ||||||||||| ||| |||||||||| |  |||||| |||    
T  40044926 gaaatggcaaagccattataaactcacacacacaagtggaggtactaggattcgaaccctggtcatggcatccgacctaacaatttcggcattttgccag 40045025  T
Q  280 ttgagttagaacttctggat 299  Q
     |||| ||||||||||||||    
T  40045026 ctgagctagaacttctggat 40045045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 297
Target Start/End: Complemental strand, 38683046 - 38682929
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  ||| ||||||  | |||||||| |||||||||||| |   ||||||||||||  |||||| |||    
T  38683046 gaaatggcaaagccattataaactcacacacacaagtgagggtaccggggttcgaaccccggtcatggcatccagcctaacaattttggcattttgccag 38682947  T
Q  280 ttgagttagaacttctgg 297  Q
    ||||| ||| ||||||||    
T  38682946 ttgagctaggacttctgg 38682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 4165077 - 4164957
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  4165077 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 4164978  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  4164977 ttgagctaggacttctggata 4164957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 29806685 - 29806565
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||   ||||||||| | |||||||||| ||  ||||||||||||  |||||  |||    
T  29806685 gaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccagtcatggcatccggcctaacaattttggcattttaccag 29806586  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| | |||||||||    
T  29806585 ttgagctaggatttctggata 29806565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 39143519 - 39143439
Alignment:
Q  220 aggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    |||||||  |||||||||||||||||||||||||  |||||||||| || |||||| |||||||| ||| |||| ||||||    
T  39143519 aggtaccgggttcgaacctcggtcatggcattcggcctaacaatttcgacattttgccagttgagctaggacttgtggata 39143439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 39150944 - 39151056
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||||||| ||    
T  39150944 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccagttgagcta 39151043  T
Q  288 gaacttctggata 300  Q
    | |||||||||||    
T  39151044 ggacttctggata 39151056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 1650417 - 1650290
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  ||    
T  1650417 agataggcgaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaacaatttcggcat 1650318  T
Q  272 tttgtcagttgagttagaacttctggat 299  Q
    ||||   |||||| ||| ||||||||||    
T  1650317 tttgcaggttgagctaggacttctggat 1650290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 6672359 - 6672240
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||| |||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  6672359 gaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 6672260  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  6672259 ttgagctaggacttctggat 6672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 18474032 - 18473913
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||| |||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  18474032 gaaatggcaaagccattataacctcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 18473933  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  18473932 ttgagctaggacttctggat 18473913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 41562576 - 41562457
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||||||| ||  |||||||||| |  |||||| |||    
T  41562576 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaactccggtcatggcatccggcctaacaatttcggcattttgccag 41562477  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  41562476 ttgagctaggacttctggat 41562457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 1269521 - 1269651
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||  ||||| || ||||||||||||| |||  || |||||||  | |||||||| |  ||||||||| ||  |||||||||| || ||    
T  1269521 agatagatgaaatgacaaagctatcataaactcacacaaataagtggaggtaccggggttcgaaccccaatcatggcatccggcctaacaatttcgacat 1269620  T
Q  272 tttgtcagttgagttagaacttctggatatc 302  Q
    ||||||||||||| ||| |||||||||||||    
T  1269621 tttgtcagttgagctaggacttctggatatc 1269651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 18625625 - 18625746
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||| | |  || ||||||   | |||||||| || |||||||||  |  ||||||||||||  |||||| |||    
T  18625625 gaaatggcaaagccattataaactcacacatacaagtggaggtactggggttcgaaccccgatcatggcatctggactaacaattttggcattttgccag 18625724  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||||||| ||||||||||||    
T  18625725 ttgagttaggacttctggatat 18625746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 34856699 - 34856614
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  34856699 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 34856614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 1244194 - 1244310
Alignment:
Q  184 atggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttg 282  Q
    |||| ||||||||||||||| |||||||  |  || |||||||| | |||||||| |||||||||||| ||  |||||||||| |  |||||| ||||||    
T  1244194 atggcaaagccattataaacccacacactcaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccagttg 1244293  T
Q  283 agttagaacttctggat 299  Q
    || ||| ||||||||||    
T  1244294 agctaggacttctggat 1244310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 23074654 - 23074774
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt-tgaaattttgtca 278  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||  | | ||||| ||    
T  23074654 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcatttttgcca 23074753  T
Q  279 gttgagttagaacttctggat 299  Q
    |||||| ||| ||||||||||    
T  23074754 gttgagctaggacttctggat 23074774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 29622314 - 29622238
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||||||||||||||||||||||  || ||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  29622314 aaagccattataaactcacacacataagtggaggtacggggttcgaaccccggtcatggcatccggcctaacaattt 29622238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 34930343 - 34930239
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  34930343 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 34930244  T
Q  280 ttgag 284  Q
    |||||    
T  34930243 ttgag 34930239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 9053989 - 9054100
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || ||||| |  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  9053989 aaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccggtcatggcatccggcctaacaatttcggtattttgccagttgagcta 9054088  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  9054089 ggacttctggat 9054100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 12665212 - 12665093
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccat-gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| |||||||||||||| ||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||| ||||| |  |||||||||||    
T  12665212 aaatggcaaagccattataaattcacacacacaagtggaggtaccggagttcgaaccccggtcatggcatccggcctaataatttcggcattttgtcagt 12665113  T
Q  281 tgagttagaacttctggata 300  Q
    |||  ||| |||||||||||    
T  12665112 tgaactaggacttctggata 12665093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 24051513 - 24051402
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||| ||| |  || |||||||| | |||||||| |||||||||||| ||  |||| ||||||   |||||| |||||||||||    
T  24051513 aaagtcattataaactcacatacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaataattttagcattttgccagttgagtta 24051414  T
Q  288 gaacttctggat 299  Q
    | ||||||||||    
T  24051413 ggacttctggat 24051402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 24443877 - 24443996
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||| ||||| |||||||  ||| ||| |||||||||| |  |||||| |||    
T  24443877 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggtttgaaccccggtcataacatccgacctaacaatttcggtattttgccag 24443976  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  24443977 ttgagctaggacttctggat 24443996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 1287431 - 1287314
Alignment:
Q  183 aatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 281  Q
    ||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||| ||| ||| |||||||||| |  |||||  || ||    
T  1287431 aatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttaccaatt 1287332  T
Q  282 gagttagaacttctggat 299  Q
    ||| ||| ||||||||||    
T  1287331 gagctaggacttctggat 1287314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 7179325 - 7179430
Alignment:
Q  195 attataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 293  Q
    ||||||||||||||||||||  || |||||| | | || ||| | ||||||||||||  |  |||||||||| || |||||| |||||||| ||||||||    
T  7179325 attataaactcacacacataagtggaggtacaaggatttgaatcccggtcatggcatctggcctaacaatttcgacattttgccagttgagctagaactt 7179424  T
Q  294 ctggat 299  Q
    ||||||    
T  7179425 ctggat 7179430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 36105127 - 36105168
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacata 214  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  36105127 agatagatgaaatggtaaagctattataaactcacacacata 36105168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 36259914 - 36259821
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 274  Q
    |||||| ||||||||||||||||||||||||||  || |||||||  | |||||||| |||||||| ||| ||  |||||||||| || |||||    
T  36259914 aaatggcaaagccattataaactcacacacataagtggaggtaccgggattcgaaccccggtcatgacatccggcctaacaatttcgacatttt 36259821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 36854168 - 36854253
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  ||||||||||    
T  36854168 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaattt 36854253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 671069 - 671189
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| || || ||||| |   ||||||||| || ||||| ||| ||| |||||||||| |  |||||| |||    
T  671069 gaaatggcaaagtcattataaactcacacacacacgtggaggtatcggggttcgaaccccgatcatgacatccgacctaacaatttcggcattttgccag 671168  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||  ||| |||||||||||    
T  671169 ttgaactaggacttctggata 671189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 2103136 - 2103024
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||| | || ||||||||| ||  |||||||||| |  |||||| |||||||| ||    
T  2103136 aaagccattataaactcacacacacaagtgtaggtaccggggttcgaatcccgatcatggcatccggcctaacaatttcggcattttgccagttgagcta 2103037  T
Q  288 gaacttctggata 300  Q
    | |||||||||||    
T  2103036 ggacttctggata 2103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 12819556 - 12819671
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    |||||||||||||||||||||||||||||| | |  |||||||||| | |||| |||| |||| ||||||  ||| |||||||||| |  |||||  ||     
T  12819556 gaaatggtaaagccattataaactcacacatacaagtgaaggtaccgaggttcaaaccacggttatggca-ccgacctaacaatttcggcattttaccaa 12819654  T
Q  280 ttgagttagaacttctg 296  Q
    ||||||||| |||||||    
T  12819655 ttgagttaggacttctg 12819671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 17080570 - 17080462
Alignment:
Q  194 cattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaact 292  Q
    ||||||||| |||||||||||  || ||||||| | ||||||||| | |||||| ||| |||  ||||||||| || ||||||||||||||| ||  |||    
T  17080570 cattataaattcacacacataagtggaggtaccgaggttcgaacccccgtcatgacatccgacttaacaatttcgacattttgtcagttgagctacgact 17080471  T
Q  293 tctggatat 301  Q
    |||| ||||    
T  17080470 tctgaatat 17080462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 28143254 - 28143362
Alignment:
Q  193 ccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaac 291  Q
    |||||||||||||||||||| |  || |||||||  | |||||||| | |||||||||| ||  |||||||||| |  |||||| |||||||| ||| ||    
T  28143254 ccattataaactcacacacacaagtggaggtaccggggttcgaaccccagtcatggcatccggcctaacaatttcggcattttgccagttgagctaggac 28143353  T
Q  292 ttctggata 300  Q
    |||||||||    
T  28143354 ttctggata 28143362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 37067816 - 37067699
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    ||||||| |||| |||||||||||||||||||    || ||||||   ||||||||  |||||||||||| ||  |||||||||| |  |||||||||||    
T  37067816 gaaatggcaaagtcattataaactcacacacaag--tggaggtacggggttcgaactccggtcatggcatccggcctaacaatttcggcattttgtcagt 37067719  T
Q  281 tgagttagaacttctggata 300  Q
    |||| ||| |||||| ||||    
T  37067718 tgaggtaggacttctagata 37067699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 37191362 - 37191258
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||| | || ||||||||| |   ||||||||||||  |||||| |||    
T  37191362 gaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaatcccgatcatggcatccagcctaacaattttggcattttgccag 37191263  T
Q  280 ttgag 284  Q
    |||||    
T  37191262 ttgag 37191258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 42068651 - 42068539
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| |   |||||||||| |  |||||| ||| |||| ||    
T  42068651 aaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccagcctaacaatttcggcattttgccagctgagcta 42068552  T
Q  288 gaacttctggata 300  Q
    | |||||||||||    
T  42068551 ggacttctggata 42068539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 42653647 - 42653551
Alignment:
Q  193 ccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttag 288  Q
    ||||| ||||||||||||||||  || || || | | |||| |||| |||||||| ||| || ||||||||||| || |||||||||||||||||||    
T  42653647 ccattttaaactcacacacataagtggagatatcgaagttcaaaccccggtcatgacatccggtctaacaatttcgacattttgtcagttgagttag 42653551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 10165642 - 10165531
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  || |||||||  | |||||||| || ||||||||| || ||||||||||| |  |||||| || ||||||||    
T  10165642 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggtctaacaatttcggcattttgccaattgagtta 10165543  T
Q  288 gaacttctggat 299  Q
    | |||| |||||    
T  10165542 ggacttatggat 10165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 16371482 - 16371513
Alignment:
Q  181 gaaatggtaaagccattataaactcacacaca 212  Q
    ||||||||||||||||||||||||||||||||    
T  16371482 gaaatggtaaagccattataaactcacacaca 16371513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 16906468 - 16906429
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacaca 212  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  16906468 agatagatgaaatggcaaagccattataaactcacacaca 16906429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 6053110 - 6053176
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttct 295  Q
    ||||||||| |||||||| ||| ||| |||||||||| |  ||||||||||||||| ||| ||||||    
T  6053110 gttcgaaccccggtcatgacatccgacctaacaatttcggcattttgtcagttgagctaggacttct 6053176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 10154221 - 10154287
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttct 295  Q
    ||||||||| |||||||||||| ||  || ||||||| |  ||||||||||||||||||| ||||||    
T  10154221 gttcgaaccccggtcatggcatccggcctgacaatttcggcattttgtcagttgagttaggacttct 10154287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 2025704 - 2025805
Alignment:
Q  194 cattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaact 292  Q
    |||||||||||||||||||||  || |||||||   ||||||||| || ||||| ||| ||| ||||||||||    ||||| ||||||||||||| |||    
T  2025704 cattataaactcacacacataagtggaggtaccggagttcgaaccccgatcatgacatccgacctaacaatttccgcattttatcagttgagttaggact 2025803  T
Q  293 tc 294  Q
    ||    
T  2025804 tc 2025805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 299
Target Start/End: Original strand, 6041856 - 6041973
Alignment:
Q  183 aatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagtt 281  Q
    ||||| ||||||| |||||||||||||||| |  ||||||||||   ||||||| | ||||||| |||| ||  |||| ||||| || |||||  |||||    
T  6041856 aatggcaaagccaatataaactcacacacacaagtgaaggtaccggggttcgaatcccggtcatagcatccggcctaataatttcgacattttaccagtt 6041955  T
Q  282 gagttagaacttctggat 299  Q
    ||| ||| ||||||||||    
T  6041956 gagctaggacttctggat 6041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 9640544 - 9640577
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||||| ||||||||||||||||||||||||||    
T  9640544 gaaatggcaaagccattataaactcacacacata 9640577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 10109897 - 10109934
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacaca 210  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  10109897 agatagatgaaatggcaaagccattataaactcacaca 10109934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 29293524 - 29293617
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||| |||||||| ||||| ||||| |||||||||||| |  || ||||||| | ||||||||| || ||||||||| ||  ||||||||||    
T  29293524 agatagatgaaatggcaaagctattatgaactcacacacacaagtggaggtaccgaggttcgaaccccgatcatggcatccggcctaacaattt 29293617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 36136886 - 36136991
Alignment:
Q  195 attataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaactt 293  Q
    |||||||||||||||||| |  || |||||||   ||||||||| ||||||| |||||||  |||||||||| |  ||||||  ||||||| ||| ||||    
T  36136886 attataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatagcattcggcctaacaatttcggcattttgctagttgagctaggactt 36136985  T
Q  294 ctggat 299  Q
    ||||||    
T  36136986 ctggat 36136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 19867283 - 19867335
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtac 225  Q
    ||||||| ||||||  |||| |||||||||||||||||||||  |||||||||    
T  19867283 agataggcgaaatgacaaagtcattataaactcacacacataagtgaaggtac 19867335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 23219179 - 23219251
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    ||||||||| || ||||||||| ||  ||||||||||||  |||||  |||||||||||| ||||||| ||||    
T  23219179 gttcgaaccccgatcatggcatacggcctaacaattttggcattttaccagttgagttaggacttctgcatat 23219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 23310458 - 23310398
Alignment:
Q  240 ggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggata 300  Q
    ||||||||||| ||  ||||||||||||  |||||| |||||||| ||| |||||||||||    
T  23310458 ggtcatggcatccggcctaacaattttggtattttgccagttgagctaggacttctggata 23310398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 36246012 - 36246119
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||| ||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||| | |  ||||| ||||||||||||    
T  36246012 aaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatgtcg-cattttttcagttgagtta 36246110  T
Q  288 gaacttctg 296  Q
    | |||||||    
T  36246111 ggacttctg 36246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 411766 - 411647
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||| ||||||||| |  || ||||||   | |||||||| |||||||| ||| ||| ||||||||||||| |||||| |||    
T  411766 gaaatggcaaagccattataaaatcacacacacaagtggaggtactggggttcgaaccccggtcatgacatccgacctaacaattttgacattttgccag 411667  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||||||||||||| ||||    
T  411666 ttgagttagaacttcaggat 411647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 4083704 - 4083586
Alignment:
Q  182 aaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagt 280  Q
    |||||| ||||||||||||||||||| |||| |  || |||||||  |||||||||| |||||||||||| ||| |||||||||| |  |||||| ||||    
T  4083704 aaatggcaaagccattataaactcacgcacacaagtggaggtaccggtgttcgaaccccggtcatggcatccgacctaacaatttcggcattttgccagt 4083605  T
Q  281 tgagttagaacttctggat 299  Q
    |||| ||| ||||||||||    
T  4083604 tgagctaggacttctggat 4083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 8448152 - 8448272
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  8448152 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 8448251  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  8448252 ttgagctaggacttctggata 8448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 8456956 - 8457076
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  8456956 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 8457055  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  8457056 ttgagctaggacttctggata 8457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 8939744 - 8939624
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||| ||| ||| |||||||||| |  |||||| |||    
T  8939744 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggcattttgccag 8939645  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| ||| |||||||||||    
T  8939644 ttgagctaggacttctggata 8939624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 18861777 - 18861893
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  18861777 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 18861876  T
Q  280 ttgagttagaacttctg 296  Q
    ||||| ||| |||||||    
T  18861877 ttgagctaggacttctg 18861893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 2959111 - 2958996
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| || |||||  |||    
T  2959111 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttaccag 2959012  T
Q  280 ttgagttagaacttct 295  Q
    |||| |||||||||||    
T  2959011 ttgaattagaacttct 2958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 6266758 - 6266646
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaat 271  Q
    |||||| |||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||  |||||||| ||| || ||||||||||| || ||    
T  6266758 agatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcgacat 6266659  T
Q  272 tttgtcagttgag 284  Q
    |||| ||||||||    
T  6266658 tttgccagttgag 6266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 7098924 - 7098805
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||| | |||||||||   |||||||||| ||  |||||||||| || |||||  |||    
T  7098924 gaaatggcaaagccattataaactcacacacacaagtggaggtaccaaggttcgaaccctagtcatggcatccggcctaacaatttcgacattttaccag 7098825  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  7098824 ttgagctaggacttctggat 7098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 10181163 - 10181044
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacca-tgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||||  ||||||||| || ||| | ||| ||| |||||||||| |  |||||| |||    
T  10181163 gaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccgatcacgacatccgacctaacaatttcggcattttgccag 10181064  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  10181063 ttgagctaggacttctggat 10181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 10531496 - 10531385
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||| | |  || |||||||  | |||||||| || |||| |||| ||  |||||||||| || ||||||||||||||| ||    
T  10531496 aaagccattataaactcacacataaaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcgatattttgtcagttgagcta 10531397  T
Q  288 gaacttctggat 299  Q
    ||||||||||||    
T  10531396 gaacttctggat 10531385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 735561 - 735443
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| ||||||||||||||||||||||||    || |||||||  | |||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  735561 gaaatggcaaagccattataaactcacacacaag--tggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 735464  T
Q  280 ttgagttagaacttctggata 300  Q
    ||||| |||||||||||||||    
T  735463 ttgagctagaacttctggata 735443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 4480592 - 4480471
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||| |  | |||||||| |  ||||||||| ||  |||||||||| |  |||||| |||    
T  4480592 gaaatggcaaagccattataaactcacacacacaagtggaggtaacggggttcgaaccccaatcatggcatccggcctaacaatttcggcattttgccag 4480493  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||||||| ||||||||||||    
T  4480492 ttgagttaggacttctggatat 4480471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 31205193 - 31205314
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || ||||||   | |||||||| || ||||||||| ||  |||||||||| |  |||||| |||    
T  31205193 gaaatggcaaagccattataaactcacacacacaagtggaggtactggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccag 31205292  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  31205293 ttgagctaggacttctggatat 31205314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 5603457 - 5603576
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||| ||||||||||||||||||| |  || ||||| || | |||||||| |||||||||||| ||  |||| ||||| |  |||||  |||    
T  5603457 gaaatggcaaagtcattataaactcacacacacaagtggaggtatcagggttcgaaccccggtcatggcatccggcctaataatttcggcatttttccag 5603556  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||||||||||||||    
T  5603557 ttgagctagaacttctggat 5603576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 8329568 - 8329687
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  || ||| |||    
T  8329568 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcatattgccag 8329667  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| |||| |||||    
T  8329668 ttgagctaggacttttggat 8329687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 8374252 - 8374141
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagtta 287  Q
    |||||||||||||||||||||| |||  || ||||| || | |||||||| || ||||||||| |   |||||||||| |  |||||  |||||||||||    
T  8374252 aaagccattataaactcacacatataagtggaggtatcagggttcgaaccccgatcatggcatcccgcctaacaatttcggcattttaccagttgagtta 8374153  T
Q  288 gaacttctggat 299  Q
    ||||||||||||    
T  8374152 gaacttctggat 8374141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 32643734 - 32643858
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacc----tgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttg 275  Q
    |||||||||||||||||||||||||| ||||| ||     || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||     
T  32643734 gaaatggtaaagccattataaactcagacacacacacaagtggaggtaccgggattcgaaccccggtcatggcatccggcctaacaatttcggcatttta 32643833  T
Q  276 tcagttgagttagaacttctggata 300  Q
     |||||||||||| |||||||||||    
T  32643834 ccagttgagttaggacttctggata 32643858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 2395575 - 2395652
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||||||||||||||||| |||||  ||||| || || | |||||||| |||||||||||| ||| ||||||||||    
T  2395575 aaagccattataaactcacatacataaatgaagatatcaggattcgaaccccggtcatggcatccgacctaacaattt 2395652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 12795029 - 12795114
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||   ||||||||| |||||||| ||| ||  ||||||||||    
T  12795029 gaaatggcaaagccattataaactcacacacataagtggaggtaccgcggttcgaaccccggtcatgacatccggcctaacaattt 12795114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 28594101 - 28594201
Alignment:
Q  201 aactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggat 299  Q
    |||||||||||| |  || ||||||| | ||||||||| || ||||||||| ||  |||||||||| ||  ||||| |||||||||||| ||||||||||    
T  28594101 aactcacacacacaagtggaggtaccgaggttcgaaccccgatcatggcatccggcctaacaatttcgaccttttgccagttgagttaggacttctggat 28594200  T
Q  300 a 300  Q
    |    
T  28594201 a 28594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 5626070 - 5626101
Alignment:
Q  181 gaaatggtaaagccattataaactcacacaca 212  Q
    ||||||||||||||||||||||||||||||||    
T  5626070 gaaatggtaaagccattataaactcacacaca 5626101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 11152585 - 11152519
Alignment:
Q  230 ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctg 296  Q
    |||||||| |||||||||||| ||   |||||||||||  |||| ||||||||||||| ||||||||    
T  11152585 ttcgaaccccggtcatggcatccggcttaacaattttggcatttggtcagttgagttaaaacttctg 11152519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 34539418 - 34539340
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcat 250  Q
    |||||| |||||||  ||||| ||||||||||||||||||||  || |||||||  | |||||||| ||||||||||||    
T  34539418 agatagatgaaatgacaaagctattataaactcacacacataagtggaggtaccgggtttcgaaccccggtcatggcat 34539340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 2301388 - 2301493
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||||||||||||| |||||||||| |  || |||||||  | |||||||| |||| ||| ||| ||| ||||||||||||  |||||| ||    
T  2301388 gaaatggcaaagccattataaaactcacacacacaagtggaggtaccggggttcgaaccccggttatgacatccgacctaacaattttggcattttgcca 2301487  T
Q  279 gttgag 284  Q
    ||||||    
T  2301488 gttgag 2301493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 3456519 - 3456474
Alignment:
Q  256 ctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    ||||||||||||| ||||||||||||||  ||||||||||| ||||    
T  3456519 ctaacaattttgacattttgtcagttgaactagaacttctgaatat 3456474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 4891134 - 4891093
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacata 214  Q
    |||||| | |||||| ||||||||||||||||||||||||||    
T  4891134 agatagataaaatggcaaagccattataaactcacacacata 4891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 5660517 - 5660432
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| || ||||||||| ||  ||||||||||    
T  5660517 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaattt 5660432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 10330923 - 10330802
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaatttt-gaaattttgtca 278  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   |||||| || ||||||||||||  |  ||||||||||| | | ||||| ||    
T  10330923 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgatccccggtcatggcatctggcctaacaattttggcatttttgcca 10330824  T
Q  279 gttgagttagaacttctggata 300  Q
    |||||| ||| |||| ||||||    
T  10330823 gttgagctaggacttgtggata 10330802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 10263096 - 10263200
Alignment:
Q  196 ttataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttc 294  Q
    ||||||||||||||||| |  || |||||| | | |||||||| |||||||||||| ||  |||||||||| |  | |||| |||||||| ||| |||||    
T  10263096 ttataaactcacacacacaagtggaggtactagggttcgaaccccggtcatggcatccggcctaacaatttcggcactttgccagttgagctaggacttc 10263195  T
Q  295 tggat 299  Q
    |||||    
T  10263196 tggat 10263200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 14982679 - 14982783
Alignment:
Q  196 ttataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttc 294  Q
    ||||||||||||||||| |  || |||||||| | ||||||||||||| ||||||| ||  |||||||||| |  |||||| ||||| || ||| ||||     
T  14982679 ttataaactcacacacacaagtggaggtaccagggttcgaacctcggttatggcatccggcctaacaatttcggtattttggcagttaagctaggacttg 14982778  T
Q  295 tggat 299  Q
    |||||    
T  14982779 tggat 14982783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 17534582 - 17534654
Alignment:
Q  229 gttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcagttgagttagaacttctggatat 301  Q
    ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||||||| ||| ||||||||||||    
T  17534582 gttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccagttgagctaggacttctggatat 17534654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 1251 - 1372
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||  | |||||||| |||||||||||| ||  |||||||||| |  |||||| |||    
T  1251 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttgccag 1350  T
Q  280 ttgagttagaacttctggatat 301  Q
    ||||| ||| ||||||||||||    
T  1351 ttgagctaggacttctggatat 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 8869 - 8988
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||||||||||||| |||||||||||||| |  ||||||||||   |||||||||||||||||| ||| ||  |||||||||| |  |||||| |||    
T  8869 gaaatggtaaagccattttaaactcacacacacaagtgaaggtaccggggttcgaacctcggtcatgacatccggcctaacaatttcggcattttgccag 8968  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||  ||||||||||    
T  8969 ttgagctatgacttctggat 8988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 39323 - 39442
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  |||||  |||    
T  39323 gaaatggaaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcattttaccag 39422  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| ||||||||||    
T  39423 ttgagctaggacttctggat 39442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 12088 - 12002
Alignment:
Q  189 aaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaatttt 274  Q
    |||||||||||||||||||||||| |  |||||||||| | |||||||| ||||||||||||| || ||||| ||||| || |||||    
T  12088 aaagccattataaactcacacacacaagtgaaggtaccgaggttcgaacatcggtcatggcatccggtctaataatttcgacatttt 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 9494 - 9366
Alignment:
Q  173 agataggtgaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaa 270  Q
    |||||| |||||||| |||||||||||||| |||||||||| |  || ||| |||  | |||||||| |||||||||||| ||  |||||||||| |  |    
T  9494 agatagatgaaatggcaaagccattataaaactcacacacacaagtggaggcaccggggttcgaaccccggtcatggcatccggcctaacaatttcggca 9395  T
Q  271 ttttgtcagttgagttagaacttctggat 299  Q
    ||||| |||||||| ||| ||||||||||    
T  9394 ttttgccagttgagctaggacttctggat 9366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 463 - 344
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||| |||||||||||||||||||||||| |  || |||||||   ||||||||| |||||||||||| ||  |||||||||| |  || ||| |||    
T  463 gaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggcatattgccag 364  T
Q  280 ttgagttagaacttctggat 299  Q
    ||||| ||| |||| |||||    
T  363 ttgagctaggacttttggat 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 6897 - 6782
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggtacc-atgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||||||||| |||||||| |||||||||||  || |||||||   ||||||||| |||||||| ||| ||  |||||||||| |  |||||| |||    
T  6897 gaaatggtaaagctattataaattcacacacataagtggaggtaccggagttcgaaccccggtcatgacatccggcctaacaatttcggcattttgccag 6798  T
Q  280 ttgagttagaacttct 295  Q
    ||||| ||| ||||||    
T  6797 ttgagctaggacttct 6782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 937 - 821
Alignment:
Q  181 gaaatggtaaagccattataaa-ctcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtca 278  Q
    ||||||| |||||||||||||| |||||||||| |  || ||| |||  | |||||||| |||||||||||| ||  |||||||||| || |||||| ||    
T  937 gaaatggcaaagccattataaaactcacacacacaagtggaggcaccggggttcgaaccccggtcatggcatccggcctaacaatttcgacattttgcca 838  T
Q  279 gttgagttagaacttct 295  Q
    |||||| ||| ||||||    
T  837 gttgagctaggacttct 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 2872 - 2768
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacatacctgaaggta-ccatgttcgaacctcggtcatggcattcgatctaacaattttgaaattttgtcag 279  Q
    ||||||||||||||||| |||||| |||||||||  || ||||| | | ||||||||| | |||||| |||  ||||||||||| | ||  |||||||||    
T  2872 gaaatggtaaagccattgtaaacttacacacataagtggaggtatcaaagttcgaaccccagtcatgacatctgatctaacaatctcgatgttttgtcag 2773  T
Q  280 ttgag 284  Q
    |||||    
T  2772 ttgag 2768  T

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Target: scaffold0684 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 2287 - 2194
Alignment:
Q  173 agataggtgaaatggtaaagccattataaactcacacacatacctgaaggtaccatg-ttcgaacctcggtcatggcattcgatctaacaattt 265  Q
    |||||| ||||||||  ||  ||||||||||||||||||| |  || |||||||| | ||  ||| ||||||||||||||||| ||||||||||    
T  2287 agatagatgaaatggagaattcattataaactcacacacacaagtggaggtaccaaggttaaaacttcggtcatggcattcgacctaacaattt 2194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 8216 - 8183
Alignment:
Q  181 gaaatggtaaagccattataaactcacacacata 214  Q
    ||||| ||||||||||||||||||||||||||||    
T  8216 gaaattgtaaagccattataaactcacacacata 8183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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