View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13541_high_12 (Length: 335)

Name: NF13541_high_12
Description: NF13541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13541_high_12
NF13541_high_12
[»] chr1 (30 HSPs)
chr1 (8-335)||(5497892-5498220)
chr1 (8-335)||(48072432-48072760)
chr1 (8-335)||(32352318-32352646)
chr1 (8-331)||(25504002-25504326)
chr1 (8-318)||(17708864-17709175)
chr1 (8-207)||(26721439-26721639)
chr1 (8-330)||(10710215-10710537)
chr1 (8-316)||(7395747-7396054)
chr1 (25-158)||(6051427-6051560)
chr1 (8-255)||(20796466-20796714)
chr1 (8-150)||(39431092-39431235)
chr1 (8-158)||(47622260-47622411)
chr1 (110-316)||(7395352-7395558)
chr1 (8-150)||(49264156-49264299)
chr1 (25-140)||(51052705-51052820)
chr1 (8-158)||(35541840-35541991)
chr1 (25-139)||(1247788-1247902)
chr1 (8-133)||(3544309-3544435)
chr1 (27-139)||(45271067-45271176)
chr1 (27-139)||(13867042-13867154)
chr1 (25-133)||(20987979-20988086)
chr1 (25-190)||(19014133-19014299)
chr1 (8-140)||(28358697-28358830)
chr1 (16-100)||(33259943-33260027)
chr1 (16-100)||(33280102-33280186)
chr1 (8-85)||(5809387-5809465)
chr1 (8-106)||(3074550-3074649)
chr1 (8-102)||(21409047-21409142)
chr1 (27-102)||(44890254-44890329)
chr1 (25-102)||(48434974-48435051)
[»] chr6 (30 HSPs)
chr6 (8-335)||(26206139-26206467)
chr6 (8-335)||(15674638-15674966)
chr6 (8-331)||(11059872-11060196)
chr6 (25-165)||(33640741-33640881)
chr6 (8-331)||(502549-502866)
chr6 (8-331)||(17078077-17078401)
chr6 (8-235)||(21549653-21549880)
chr6 (8-158)||(13086349-13086500)
chr6 (8-254)||(649160-649407)
chr6 (10-136)||(10362955-10363081)
chr6 (16-234)||(11469388-11469600)
chr6 (25-158)||(2554429-2554562)
chr6 (8-154)||(21629309-21629456)
chr6 (8-100)||(14843378-14843471)
chr6 (25-126)||(26514549-26514650)
chr6 (8-139)||(13938524-13938656)
chr6 (27-139)||(14686210-14686322)
chr6 (8-142)||(12673318-12673453)
chr6 (8-154)||(17576904-17577051)
chr6 (8-154)||(17605521-17605668)
chr6 (18-145)||(18681770-18681897)
chr6 (25-140)||(32186507-32186622)
chr6 (16-126)||(19350759-19350869)
chr6 (56-132)||(12608295-12608371)
chr6 (8-139)||(25351029-25351161)
chr6 (8-85)||(13563186-13563264)
chr6 (84-158)||(15956159-15956233)
chr6 (36-100)||(19616120-19616184)
chr6 (19-106)||(1104182-1104269)
chr6 (90-133)||(22522040-22522083)
[»] chr2 (29 HSPs)
chr2 (8-335)||(13551388-13551716)
chr2 (8-325)||(25380409-25380728)
chr2 (8-240)||(28399651-28399884)
chr2 (8-233)||(15018483-15018709)
chr2 (8-158)||(8065444-8065595)
chr2 (8-158)||(35488644-35488795)
chr2 (16-150)||(11233680-11233814)
chr2 (16-154)||(45422335-45422473)
chr2 (23-156)||(28253551-28253684)
chr2 (8-255)||(9668092-9668340)
chr2 (16-145)||(33515389-33515518)
chr2 (25-150)||(12646374-12646499)
chr2 (25-126)||(22724654-22724755)
chr2 (25-140)||(6824235-6824348)
chr2 (279-331)||(22724508-22724560)
chr2 (27-115)||(26147041-26147129)
chr2 (25-158)||(10289249-10289382)
chr2 (8-140)||(33583629-33583762)
chr2 (27-142)||(2207021-2207136)
chr2 (27-142)||(13416512-13416627)
chr2 (27-122)||(34357634-34357729)
chr2 (27-115)||(10689364-10689452)
chr2 (8-142)||(44028412-44028547)
chr2 (16-102)||(20946828-20946914)
chr2 (25-102)||(2282606-2282683)
chr2 (25-106)||(4222175-4222256)
chr2 (16-145)||(32191871-32192000)
chr2 (8-139)||(20004751-20004883)
chr2 (27-115)||(43311085-43311173)
[»] chr4 (44 HSPs)
chr4 (8-335)||(20675841-20676169)
chr4 (8-335)||(55299427-55299755)
chr4 (8-323)||(23872495-23872811)
chr4 (8-331)||(29552811-29553135)
chr4 (16-331)||(19648510-19648825)
chr4 (8-254)||(8935880-8936127)
chr4 (8-233)||(19115242-19115468)
chr4 (8-331)||(34976747-34977071)
chr4 (8-330)||(10562335-10562658)
chr4 (8-238)||(26694734-26694965)
chr4 (8-331)||(42779056-42779380)
chr4 (25-158)||(23641774-23641907)
chr4 (8-158)||(1827723-1827874)
chr4 (16-254)||(7662395-7662633)
chr4 (25-158)||(23647432-23647565)
chr4 (8-247)||(42952625-42952865)
chr4 (25-158)||(47419628-47419761)
chr4 (26-158)||(19756092-19756224)
chr4 (26-158)||(19783582-19783714)
chr4 (8-145)||(19733184-19733322)
chr4 (8-139)||(2072346-2072478)
chr4 (26-141)||(2365830-2365945)
chr4 (22-139)||(9691244-9691361)
chr4 (25-142)||(40688905-40689022)
chr4 (108-331)||(20396472-20396695)
chr4 (16-123)||(3129194-3129301)
chr4 (8-150)||(48312900-48313043)
chr4 (8-126)||(53486144-53486263)
chr4 (60-158)||(11586366-11586464)
chr4 (27-133)||(29327989-29328095)
chr4 (63-145)||(55724903-55724985)
chr4 (27-112)||(38296531-38296616)
chr4 (179-254)||(3129082-3129157)
chr4 (27-142)||(19162368-19162483)
chr4 (25-100)||(29133687-29133762)
chr4 (25-95)||(15342644-15342714)
chr4 (16-100)||(55464122-55464206)
chr4 (293-328)||(23641604-23641639)
chr4 (293-328)||(23647262-23647297)
chr4 (293-328)||(47419896-47419931)
chr4 (219-325)||(9691441-9691547)
chr4 (8-85)||(43516004-43516082)
chr4 (21-98)||(12079157-12079234)
chr4 (8-51)||(20396388-20396432)
[»] chr8 (32 HSPs)
chr8 (26-331)||(16375113-16375418)
chr8 (16-330)||(4987076-4987390)
chr8 (8-330)||(36157960-36158282)
chr8 (8-331)||(17659647-17659971)
chr8 (8-158)||(23942893-23943044)
chr8 (8-325)||(45254856-45255174)
chr8 (25-158)||(7925210-7925343)
chr8 (8-154)||(7453158-7453305)
chr8 (8-195)||(43611337-43611525)
chr8 (7-158)||(41664551-41664703)
chr8 (8-154)||(43612372-43612519)
chr8 (19-148)||(6901755-6901885)
chr8 (25-158)||(32267378-32267511)
chr8 (8-139)||(11393533-11393665)
chr8 (8-139)||(24794526-24794658)
chr8 (8-139)||(43249006-43249138)
chr8 (16-115)||(12332663-12332762)
chr8 (8-150)||(13878678-13878821)
chr8 (27-141)||(36493207-36493321)
chr8 (25-150)||(8300627-8300752)
chr8 (8-158)||(9923407-9923558)
chr8 (8-139)||(26774449-26774581)
chr8 (8-154)||(17700286-17700433)
chr8 (25-154)||(12135047-12135174)
chr8 (33-154)||(20825132-20825253)
chr8 (8-76)||(29721176-29721245)
chr8 (16-82)||(15539872-15539938)
chr8 (293-328)||(7925478-7925513)
chr8 (288-331)||(36493468-36493511)
chr8 (63-96)||(21312415-21312448)
chr8 (178-254)||(11393425-11393501)
chr8 (25-85)||(12341391-12341451)
[»] chr7 (27 HSPs)
chr7 (8-335)||(13440864-13441192)
chr7 (8-331)||(45993382-45993706)
chr7 (8-331)||(34232507-34232831)
chr7 (20-254)||(43572360-43572594)
chr7 (25-158)||(4937311-4937444)
chr7 (8-330)||(4078083-4078402)
chr7 (8-254)||(18768214-18768456)
chr7 (8-154)||(46626628-46626775)
chr7 (8-158)||(17721441-17721592)
chr7 (25-148)||(41340373-41340496)
chr7 (16-106)||(33820794-33820884)
chr7 (16-154)||(36227338-36227476)
chr7 (16-103)||(22818955-22819042)
chr7 (27-126)||(27218337-27218436)
chr7 (8-158)||(29968780-29968931)
chr7 (16-250)||(12378059-12378293)
chr7 (27-140)||(45164748-45164861)
chr7 (27-115)||(41804985-41805073)
chr7 (27-115)||(25018528-25018616)
chr7 (51-108)||(23887823-23887880)
chr7 (293-328)||(4937141-4937176)
chr7 (8-126)||(11276463-11276582)
chr7 (8-102)||(17056335-17056430)
chr7 (8-58)||(19735324-19735375)
chr7 (51-108)||(23898999-23899056)
chr7 (272-325)||(28172999-28173052)
chr7 (25-97)||(28740179-28740251)
[»] chr3 (38 HSPs)
chr3 (26-235)||(6175583-6175792)
chr3 (19-331)||(43120684-43120996)
chr3 (8-331)||(23819371-23819695)
chr3 (8-154)||(24925872-24926019)
chr3 (20-235)||(42674544-42674759)
chr3 (8-331)||(50545049-50545373)
chr3 (8-330)||(46907681-46908004)
chr3 (8-150)||(48569214-48569357)
chr3 (25-158)||(2365102-2365235)
chr3 (15-139)||(21739690-21739814)
chr3 (8-150)||(10868450-10868593)
chr3 (19-325)||(14863472-14863778)
chr3 (16-254)||(30166410-30166648)
chr3 (8-158)||(34331998-34332149)
chr3 (8-241)||(36709715-36709949)
chr3 (8-139)||(31675737-31675869)
chr3 (26-140)||(19876068-19876182)
chr3 (25-139)||(31920554-31920668)
chr3 (25-144)||(19919426-19919545)
chr3 (8-129)||(15480970-15481092)
chr3 (8-139)||(962365-962497)
chr3 (27-139)||(40512926-40513038)
chr3 (16-154)||(19891492-19891630)
chr3 (28-140)||(14309406-14309518)
chr3 (33-154)||(12341442-12341563)
chr3 (25-150)||(16179764-16179889)
chr3 (8-139)||(53942052-53942184)
chr3 (22-121)||(17270962-17271061)
chr3 (29-139)||(34830220-34830331)
chr3 (8-69)||(47538073-47538135)
chr3 (27-115)||(16672247-16672335)
chr3 (293-328)||(2365370-2365405)
chr3 (8-102)||(44888710-44888805)
chr3 (27-141)||(6825638-6825752)
chr3 (16-82)||(8948278-8948344)
chr3 (25-139)||(55367433-55367547)
chr3 (28-112)||(7164315-7164399)
chr3 (27-139)||(52250327-52250439)
[»] chr5 (38 HSPs)
chr5 (8-262)||(22094328-22094583)
chr5 (8-254)||(30509110-30509357)
chr5 (8-254)||(30549453-30549700)
chr5 (16-331)||(6050055-6050370)
chr5 (8-254)||(35121775-35122022)
chr5 (8-241)||(38358273-38358508)
chr5 (16-254)||(10485989-10486227)
chr5 (8-207)||(20207854-20208054)
chr5 (28-154)||(31865124-31865250)
chr5 (25-158)||(42514544-42514677)
chr5 (25-158)||(30731497-30731630)
chr5 (127-255)||(25591265-25591393)
chr5 (19-154)||(588325-588460)
chr5 (8-139)||(19506804-19506936)
chr5 (8-158)||(23239189-23239340)
chr5 (8-158)||(28534859-28535010)
chr5 (8-150)||(27796290-27796433)
chr5 (16-154)||(33385160-33385298)
chr5 (27-142)||(36256601-36256716)
chr5 (26-98)||(19838390-19838462)
chr5 (16-139)||(380716-380839)
chr5 (8-154)||(25856626-25856773)
chr5 (7-139)||(33170463-33170596)
chr5 (8-112)||(42260088-42260193)
chr5 (25-73)||(29572138-29572186)
chr5 (25-73)||(29573515-29573563)
chr5 (25-73)||(29574892-29574940)
chr5 (25-73)||(29576269-29576317)
chr5 (25-73)||(29577646-29577694)
chr5 (25-73)||(29579023-29579071)
chr5 (27-141)||(4297509-4297623)
chr5 (27-115)||(21084707-21084795)
chr5 (48-139)||(6886010-6886101)
chr5 (189-331)||(6999973-7000115)
chr5 (25-96)||(35983036-35983107)
chr5 (63-106)||(17697458-17697501)
chr5 (293-328)||(42514812-42514847)
chr5 (27-81)||(19853886-19853940)
[»] scaffold0179 (2 HSPs)
scaffold0179 (7-201)||(8337-8532)
scaffold0179 (7-201)||(13271-13466)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-331)||(182933-183245)
[»] scaffold0034 (2 HSPs)
scaffold0034 (25-158)||(105026-105159)
scaffold0034 (293-328)||(104856-104891)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-254)||(133932-134158)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-254)||(311760-311986)
[»] scaffold0131 (1 HSPs)
scaffold0131 (16-328)||(3561-3873)
[»] scaffold0418 (1 HSPs)
scaffold0418 (16-154)||(8419-8557)
[»] scaffold1350 (1 HSPs)
scaffold1350 (8-150)||(350-493)
[»] scaffold0472 (1 HSPs)
scaffold0472 (8-158)||(4058-4209)
[»] scaffold0061 (1 HSPs)
scaffold0061 (27-115)||(55491-55579)
[»] scaffold0017 (1 HSPs)
scaffold0017 (27-115)||(143054-143142)
[»] scaffold0016 (1 HSPs)
scaffold0016 (27-115)||(28600-28688)
[»] scaffold0189 (1 HSPs)
scaffold0189 (16-81)||(6906-6971)
[»] scaffold0048 (1 HSPs)
scaffold0048 (27-140)||(63501-63614)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-133)||(67904-68012)


Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 5497892 - 5498220
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5497892 agattatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 5497991  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  5497992 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacgcaatcttcgaggattaccaccaataggcatacccagatac 5498091  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5498092 aagaaaggaacgttacctactttacaacttaacacggaagcagcctcatgtaaccaagacgacgcaatattcaccccaacaagcatactcttatgaaaat 5498191  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||||||||||    
T  5498192 tcactttcaaacccgacatagcctcgaac 5498220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 8 - 335
Target Start/End: Complemental strand, 48072760 - 48072432
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  48072760 agattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaa 48072661  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||    
T  48072660 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtac 48072561  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| ||  | || ||||||||||| ||||| || ||||| |||| |||||| |||||| |||||||||||   || |||||||||||||||||||    
T  48072560 aagaaagggacagttccaactttacaactcaacacggatgcagcttcatataaccaggacgacccaatattcacctccaccagcatactcttatgaaaat 48072461  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||||||||||    
T  48072460 tcactttcaaacccgacatagcctcgaac 48072432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 335
Target Start/End: Complemental strand, 32352646 - 32352318
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  32352646 agattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaa 32352547  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||  |||||||||||||| ||||| ||||||    
T  32352546 ccgactattccaacccgacagtctagatttaatacaattcacaataggttcccagaaacacaatcttcgagtgttaccaccaataggaatacctaggtac 32352447  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| ||  | || ||||||||||| ||||| || ||||| |||| |||||| ||| || ||||||||||||  || |||||||||||||||||||    
T  32352446 aagaaagggacagttccaactttacaactcaacacggatgcagcttcatataaccaggacaacccaatattcacccccaccagcatactcttatgaaaat 32352347  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||||||||||    
T  32352346 tcactttcaaacccgacatagcctcgaac 32352318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 25504326 - 25504002
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||| || ||||||||||| || ||    
T  25504326 agattatacctgacggagctttgaagaaagaaagagcatagacaggaagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaa 25504227  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| |||||||||||||| ||||||||||||| |||  || || ||| ||| |  ||||||||||||||||| |||||||||| |||     
T  25504226 acgactattccaacctgacagtctagattttatacgattcacaacagggacccaggaacacaaacgacgaggattaccaccaatcggcatacccaagtat 25504127  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| || ||  | ||||||||| | | |||||| |||||||||  ||||||||| || ||||| || |||| ||| |||| |||||||| |||||    
T  25504126 aagaaaggcaccttttccactttacaattaagcacagacgcagcctcaactaaccaagaagatgcaatgttaaccccaaccagcaaactcttattaaaat 25504027  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    | ||||||||||| |||| ||||||    
T  25504026 taactttcaaaccagacaaagcctc 25504002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 17708864 - 17709175
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| || |    |||||  || || ||||||||||||||    
T  17708864 agattatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagactttaactaaaccagacggccgccaaaagatagaaa 17708963  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||  |||| ||| |||||||||||||  |||||| | |||| ||| |  |||| ||| || || ||||| |  |||| ||||    
T  17708964 acgactattccaaccagacaacctagcttttatacgattcacaaatggttcccaaaaactcaaacgccgagaatttcccccgataggaaagcccaagtac 17709063  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    || || || || ||||| ||||| ||| |||| ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||    
T  17709064 aaaaacggcaccttacccactttgcaatttaaaacagacgccgcctcacttaaccaagaagaagcgatattcacaccaaccaagc-tactcttatgaaaa 17709162  T
Q  306 ttcactttcaaac 318  Q
    ||||| |||||||    
T  17709163 ttcaccttcaaac 17709175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 26721439 - 26721639
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || | ||||||||  || || ||| |||||| |||    
T  26721439 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaaccagacggccgccataagataaaaa 26721538  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||  |||| |||||| |||||||||||||||||| | |||| ||| |   ||| ||| || |||||||||||||||| ||||    
T  26721539 acgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaactcaaacgctgagaatttcccccaataggcatacccaagtac 26721638  T
Q  207 a 207  Q
    |    
T  26721639 a 26721639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 330
Target Start/End: Complemental strand, 10710537 - 10710215
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||| | |||||||||| |||||||||||| || || || |  ||||| |  || || |||||||||| |||    
T  10710537 agattatacctgatggagctttgaagaaggaa-gcgcatagacagacaaagaggtcagaaccgactttaacagaactagacggccgccaaaagataaaaa 10710439  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| | ||  |||| ||| || |||||||||||||||||| | |||| ||| |  |||| ||| ||  | ||||||||||| | ||||    
T  10710438 acgactattccaaccagtcaacctagcttttatgcgattcacaataggttcccaaaaactcaagcgccgagaatttccctcgataggcatacctaagtac 10710339  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaa-caagcatactcttatgaaaa 305  Q
    || || || || || || ||||| |||||||| |||||||| ||||||  ||||||||| |  || |||||||| | || |||||  |||||||||||||    
T  10710338 aaaaatggtaccttgcccactttccaacttaaaacagaagccgcctcacttaaccaagaaggagcgatattcacacaaaccaagc-cactcttatgaaaa 10710240  T
Q  306 ttcactttcaaacccgacatagcct 330  Q
    ||||| |||||||| ||||||||||    
T  10710239 ttcaccttcaaaccagacatagcct 10710215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 7396054 - 7395747
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||||||||||||  ||||||||| ||||||||||| |||||| || |  | |||||| || || ||||| || |||||    
T  7396054 agattatacctgatggagctttgaagaaggaaagatcatagacagacaaagaggtcaagacagactttaacaaaaccaaacggccgccaaaggagagaaa 7395955  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     ||||| |||||||| |||   ||||  |||||||||||||||||||| ||  |||||| |||||  |||||||||   |||||||||| |||||  |||    
T  7395954 acgactcttccaaccagac--cctagccttaatacgattcacaataggatctcagaaactcaatcgccgaggattatatccaataggcagacccaactac 7395857  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    | |||||| || ||||| || || |||||||| ||||  ||  |||||| ||||||||| |  || || ||||| | ||| | ||||||||||  |||||    
T  7395856 atgaaaggcaccttacccaccttgcaacttaaaacagctgcgacctcatttaaccaagagggggcgatgttcacaccaaccaacatactcttagaaaaat 7395757  T
Q  307 tcactttcaa 316  Q
    ||||||||||    
T  7395756 tcactttcaa 7395747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 6051427 - 6051560
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  6051427 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 6051526  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  6051527 caatctagatttaatacgatccaccacaggttcc 6051560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 20796466 - 20796714
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||||| ||||| ||||| || | ||| | ||| |||||||||||||| || || |||||    
T  20796466 agattatacctgatggagctttaaagaaggaaagagcatagacaggaaaagaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaa 20796565  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggta 205  Q
     |||||||||||||| |||| |||||||||||| | |||||||| ||| ||| | ||| | ||  |  |  |||||||| || ||||| | ||| |||||    
T  20796566 tcgactattccaacctgacaatctagatttaattctattcacaacagggtccca-aaatgaaagacgacacggattaccccctataggtaaaccaaggta 20796664  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagcagcctcat 255  Q
    || ||||||||  || || ||||||||||||||||| ||||| |||||||    
T  20796665 catgaaaggaatcttgcccactttacaacttaacaccgaagccgcctcat 20796714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 39431092 - 39431235
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| || |||||||| |||||||||||||| ||  ||||||| | ||| | ||| |||||||||||||| || || |||||    
T  39431092 agattatacctgatggagctttaaataaggaaagagcatagacaggcaacgaattcaggactgctttcaaaaggaccaagcgaccaccgaacgagagaaa 39431191  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    ||||||||||||||| |||| |||||||||||| | ||||||||    
T  39431192 ccgactattccaacctgacaatctagatttaattctattcacaa 39431235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 47622411 - 47622260
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| |||| ||| ||||||| |||||||||||||||||||| | ||  ||||||||||| || ||||| |  | ||||||||||||||| |||||    
T  47622411 agattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactttagaaggattaggcgaccaccaaaagagagaaa 47622312  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||||  |||||| |||| |||||||||||| ||||| |||| |||||||    
T  47622311 ccgactacgccaaccagacaatctagatttaattcgattaacaacaggttcc 47622260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 110 - 316
Target Start/End: Complemental strand, 7395558 - 7395352
Alignment:
Q  110 actattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaag 209  Q
    |||| ||||||| ||||  ||||  |||||||||||||||||||| ||  |||||| ||||| |||||||||||| |||||||||| |||||  |||| |    
T  7395558 actactccaaccagacatcctagccttaatacgattcacaataggatctcagaaactcaatcgtcgaggattacctccaataggcagacccaactacatg 7395459  T
Q  210 aaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattca 309  Q
    ||||  || |||||||| || ||||||||  |||  || ||||||| ||||||||| |  || || ||||| | ||| | ||||||||||| ||||||||    
T  7395458 aaagacaccttacctaccttgcaacttaaatcagccgctgcctcatttaaccaagagggggcgatgttcacaccaaccaacatactcttataaaaattca 7395359  T
Q  310 ctttcaa 316  Q
    |||||||    
T  7395358 ctttcaa 7395352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 49264299 - 49264156
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||| ||||| |||||||||||||| || ||||| || | ||| | ||| |||||||||||||| || || |||||    
T  49264299 agattatacctgatggagctttaaagaaagaaagagcatagacaggcaacgaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaa 49264200  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||||||||||||  ||| |||||||||||| | ||||||||    
T  49264199 ccgactattccaacctaacaatctagatttaattctattcacaa 49264156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 51052705 - 51052820
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  51052705 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 51052804  T
Q  125 cagtctagatttaata 140  Q
    || |||||||||||||    
T  51052805 caatctagatttaata 51052820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 35541840 - 35541991
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| || || |||||    
T  35541840 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccacctaaggaaagaaa 35541939  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| | || |||| |||||||||| ||||||| |||||||    
T  35541940 ccgactttgccaaccagccaatctatatttaatacggttcacaacaggttcc 35541991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 1247902 - 1247788
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| ||||||||| | || |||||||||||||| |||||||||||||| ||  | |||||||| ||||| ||||| | ||| |||||    
T  1247902 ctttgaaaaaggaaagagcatagacatgtaacgaggtcaggacagacttgagaagaaccaaccgggctccaaaagagagaaagcgactttgccaccccga 1247803  T
Q  125 cagtctagatttaat 139  Q
     |||||||| |||||    
T  1247802 tagtctagacttaat 1247788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 3544435 - 3544309
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||||||||| ||||||| |||||  |||||||||| ||| ||||| |||||||| ||| |    
T  3544435 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaagagagaga 3544336  T
Q  107 ccgactattccaacccgacagtctaga 133  Q
     ||||| | ||| ||||| | ||||||    
T  3544335 gcgactttgccaccccgataatctaga 3544309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 45271067 - 45271176
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || || |||||||| || |||||||| |||   |||||||||||  |||| ||||    
T  45271067 ttgaagaaggaaagagcatagacaggaagagaggtcaagacagacttaaggagaaccaaccggccaccaaacgat---aaccgactattgaaacctgaca 45271163  T
Q  127 gtctagatttaat 139  Q
    |||| ||||||||    
T  45271164 gtctcgatttaat 45271176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 13867154 - 13867042
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||| ||||| || |  ||||||||||| || ||||| ||||| ||||| |||||||| ||||| ||||| |  || ||| |||    
T  13867154 ttgaagaaggaaagagcatatacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagagagaaaacgactttgtcaccccaaca 13867055  T
Q  127 gtctagatttaat 139  Q
    |||||||||||||    
T  13867054 gtctagatttaat 13867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 20987979 - 20988086
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| ||||||||||| |  |||||||||||| | |||||||||||||| ||||| || || || ||||| | ||| ||||| |||||    
T  20987979 ctttgaagaaggaaagagcatagacaggtagcgaggtcaggacacacttgagaagaaccaaccgacc-ccgaaggagagaaaacaacttttccaccccga 20988077  T
Q  125 cagtctaga 133  Q
    || ||||||    
T  20988078 caatctaga 20988086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 19014299 - 19014133
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca-acccg 123  Q
    |||||||||||||||| ||||||||| | |   |||||| |||| | |||||||  ||||| || || ||||||||||||||  |||||| |||  ||||    
T  19014299 ctttgaagaaggaaagagcatagacaagaagccaggtcaagacaaacttgagaaagaccaaccggcccccaaaagatagaaagtgactatgccacccccg 19014200  T
Q  124 acagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaat 190  Q
    ||||||||| |||||||  |||||  ||||||||| | |||   || |||||||||| |||||||||    
T  19014199 acagtctagttttaatagtattcatcataggttcccaaaaatctaaccttcgaggatcaccaccaat 19014133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 28358697 - 28358830
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||| | |  || || |||||| | || ||||||| ||||||||| || || ||||||||    
T  28358697 agattatacctgacggagctttgaagaaggaaagagcatagacatgaagcgatgttaggacaaacttaagaagaatcaagcgacccccgaaggatagaaa 28358796  T
Q  107 ccgactattccaacccgacagtctagatttaata 140  Q
     ||||| | ||| ||||| | |||||||||||||    
T  28358797 acgactttgccaccccgataatctagatttaata 28358830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33260027 - 33259943
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||| ||| |||||||||||||||| ||||||||||| | |||| ||| |||||| || |||||||| |  ||||||||||||||    
T  33260027 ctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaaga 33259943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33280186 - 33280102
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||| ||| |||||||||||||||| ||||||||||| | |||| ||| |||||| || |||||||| |  ||||||||||||||    
T  33280186 ctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaaga 33280102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 5809387 - 5809465
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||| || | |||||||||||| || ||||| |||||    
T  5809387 agattatacctgacggagctttgaagaaggaaagagcatagacaggtaacgcggtcaggacagacttaagaaggaccaa 5809465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 3074550 - 3074649
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| || ||||||||||||| ||||||||| | | ||||| ||||| |   || || |||||||  ||||||||||||||||||||    
T  3074550 agattatacctgatggagctctgaagaaggaaagggcatagacatgaagagaggacaggaaaaccttaaggagaaccagacgaccaccaaaagatagaaa 3074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 21409047 - 21409142
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||||| ||||||  || ||||||||||||   |||||||||| | ||||| ||||||||| || || |||||||  ||||||||||||||||    
T  21409047 agattatacctgatggtgctctgaagaaggaaaaaacatagacaggaagagaggacaggacagacttaaggagaaccagacgaccaccaaaagata 21409142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 44890254 - 44890329
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    |||||||| ||||| ||||| ||||||| ||| | || ||||||||| |  |||||||| ||||||||||||||||    
T  44890254 ttgaagaaagaaagagcataaacaggcatagatgacaagacagatttcaacagaaccaaacgaccaccaaaagata 44890329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 48434974 - 48435051
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||| |||||||| || ||||||||||| || | |||||||||||| | ||||| |||||| || ||| ||||||    
T  48434974 ctttgaaaaaggaaagagcgtagacaggcaatgaagacaggacagattttaaaagaatcaagcggcccccataagata 48435051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 26206139 - 26206467
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26206139 agattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 26206238  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||    
T  26206239 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgaggattaccaccaataggcatacccagatac 26206338  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  26206339 aagaaaggaacgttacctactttacaacttaacacggaagcagcctcatgtaaccaagactacgcaatattcaccccaataagcatactcttatgaaaat 26206438  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||| ||||||    
T  26206439 tcactttcaaacccgacatagcttcgaac 26206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 15674638 - 15674966
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  15674638 agattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaacccagcgaccaccaaaagagagaaa 15674737  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||    
T  15674738 ccgtctattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtac 15674837  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||||||  | |||||||||||||  ||||| |||||||| |||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  15674838 aagaaaggaacaattcctactttacaacacaacacggaagcagcttcatttaaccaagacgacccaatattcacccccacaagcatactcttatgaaaat 15674937  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    ||||||||||||| ||||| |||||||||    
T  15674938 tcactttcaaacctgacatcgcctcgaac 15674966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 11060196 - 11059872
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |  | |||||  || ||||||||||||| |||    
T  11060196 agattatacctgatggaactttgaagaaggaaagcgcatagacaggcaaaaaggtcaggacagactttaacaaaaccagacggccaccaaaagataaaaa 11060097  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     ||||| |||||||| ||||  |||| ||| ||||||||||||||||| ||| |||||| ||| |  |||| ||| || |  ||||||||||| | ||||    
T  11060096 acgactgttccaaccagacaacctagcttttatacgattcacaataggatcccagaaactcaaacgccgagaatttcccctgataggcatacctaagtac 11059997  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    |  || || || || || | ||| || | ||| | ||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||    
T  11059996 ataaacggcaccttgcccattttgcagcctaaaagagacgccgcctcacttaaccaagaagaagcgatattcacacccaccaagc-tactcttatgaaaa 11059898  T
Q  306 ttcactttcaaacccgacatagcctc 331  Q
    ||||| || ||||| |||||||||||    
T  11059897 ttcacctttaaaccggacatagcctc 11059872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 33640741 - 33640881
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||| || ||||||||||| || || |||||||||||||| ||    
T  33640741 ctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgactattccaacctga 33640840  T
Q  125 cagtctagatttaatacgattcacaataggttcctagaaac 165  Q
    ||||||||| || ||||||||||||| ||| ||| ||||||    
T  33640841 cagtctagactttatacgattcacaacagggtcccagaaac 33640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 502866 - 502549
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||| ||||| ||||||||||||| |||||||||  ||||||||||||||||||| || ||        | || ||    
T  502866 agattatacctgacggagctttgaagaaagaaagagcatagacaggcatagaggtcagcgcagatttgagaagaaccaaacggccc-------agaggaa 502774  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| |||||||||| ||| ||||||||||||| ||| ||| |||||| |||    ||||||||||||||||| ||||||||||  ||     
T  502773 acgactattccaacctgacagtctagtttttatacgattcacaacagggtcccagaaacacaaatgacgaggattaccaccaatcggcatacccaaatat 502674  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| || || || ||||||||| ||| |||||| | |||||||  ||||||  | || || || || |||| ||| |||  |||||| || ||||    
T  502673 aagaaaggcacctttcccactttacaatttagcacagacgtagcctcaaataaccagaaagatgcgatgttaaccccaaccagcgaactcttgtggaaat 502574  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    | ||||||||||| |||| ||||||    
T  502573 taactttcaaaccagacaaagcctc 502549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 17078401 - 17078077
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||| |||| || ||||||||| || || || |  |||||||  || || |||||||||| |||    
T  17078401 agattatacctgatggagctttgaagaaggaaagcgcataaacagacagagaggtcagaactgactttaacagaaccatacggccgccaaaagataaaaa 17078302  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
      ||||||||||||| ||||  |||| ||| || |||||||||||||||||| | |||| ||| |  |||| ||| |  || ||||||||||| ||||||    
T  17078301 aagactattccaaccagacaacctagcttttattcgattcacaataggttcccaaaaactcaagcgccgagaatttctcccgataggcatacctaggtac 17078202  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    || || || || || || ||||| ||||| || ||||| || ||||||  ||||||||| |  | ||||||||| || | ||||| || |||||||||||    
T  17078201 aaaaatggcaccttgcccactttgcaactcaaaacagacgctgcctcacttaaccaagagggggaaatattcacaccaaccaagc-tagtcttatgaaaa 17078103  T
Q  306 ttcactttcaaacccgacatagcctc 331  Q
    ||||| |||| ||| |||||||||||    
T  17078102 ttcaccttcagaccagacatagcctc 17078077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 21549653 - 21549880
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||| ||||| ||||||||| ||| ||| ||||| || |||||||| |||| |||||| ||||||||||| |||||    
T  21549653 agattatacctgttggagctttgaagaaagaaagagcatagacaagcagagatgtcagaactgatttgaggagaatcaagcggccaccaaaagagagaaa 21549752  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     | |||||||||| ||| ||||||||||||||| |||||||  || |||||| | ||  | | ||| || ||||||||||| |||||||  || ||||||    
T  21549753 tctactattccaa-ccgtcagtctagatttaatgcgattcaagatcggttcccaaaactgaagtctccgtggattaccacctataggcaggcctaggtac 21549851  T
Q  207 aagaaaggaacgttacctactttacaact 235  Q
    || |||||||   |||| |||||||||||    
T  21549852 aaaaaaggaattctacccactttacaact 21549880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 13086349 - 13086500
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||||||||| ||||| ||||||||||| ||||| || | ||| | ||| |||||||||||||| || || |||||    
T  13086349 agattatacctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgaaagaaa 13086448  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||| ||||||||||  ||||||||||||||||| | |||||||| |||||||    
T  13086449 ccggctattccaacttgacagtctagatttaattctattcacaacaggttcc 13086500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 649407 - 649160
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||| || |  | |||||  || || ||||||||||||||    
T  649407 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagactttaacaaaaccagacggccgccaaaagatagaaa 649308  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||  ||||  |||| ||| || ||||||||||| |||||| | ||||  || |  |||| ||| || || ||||||||  ||| ||||    
T  649307 acgactattccaactagacaacctagcttttatgcgattcacaattggttcccaaaaacttaaacgccgagaatttcccccgataggcatgtccaagtac 649208  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    || || || || ||||| ||||| |||||||| ||||| || ||||||    
T  649207 aaaaacggcaccttacccactttgcaacttaaaacagacgccgcctca 649160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 10362955 - 10363081
Alignment:
Q  10 attatactgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccg 109  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||| | |||||||| |||||| ||||||||||| || ||||||||||| || ||||||||    
T  10362955 attatattgacggaaccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttgagaagaactaaacgaccaccaaacgacagaaaccg 10363054  T
Q  110 actattccaacccgacagtctagattt 136  Q
    ||| ||  | || ||||||||||||||    
T  10363055 acttttgaaccctgacagtctagattt 10363081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 11469388 - 11469600
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| |||      || | ||| |||||||| ||||| ||||||| |||||  |||||||| || |||||| | |||||    
T  11469388 ctgatggagctttgaagaaggaaagagca------ggaagagaagtcaggactgattttagaagaatcaagcagccaccaaatgagagaaacaggctatt 11469481  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
    ||| |||||||||||||||||||| ||||||||||| || ||| | ||||| || |||  ||||||| || || | ||||| ||| || |||||||||||    
T  11469482 ccaccccgacagtctagatttaattcgattcacaatcgggtccca-aaacgaaagtctctgaggatttccccctacaggcaaaccaagatacaagaaagg 11469580  T
Q  215 aacgttacctactttacaac 234  Q
    ||| || || ||||||||||    
T  11469581 aaccttccccactttacaac 11469600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 2554429 - 2554562
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| | ||  ||||||||  | || || |||| ||| |||||||| ||||| || |||||||| |  ||||| ||    
T  2554429 ctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgtcaaccaga 2554528  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||||||||| |||||||    
T  2554529 caatctagatttaatacgattcacaacaggttcc 2554562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 21629456 - 21629309
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| |  |  |||| ||||||||||||||| | ||||||||||||||| || ||  |    
T  21629456 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggta 21629357  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    || ||||| |||||| |||| |||||| || |||| ||| ||||||||    
T  21629356 cctactatgccaaccagacaatctagactttatacaattaacaatagg 21629309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 14843471 - 14843378
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||||||||| ||||||| |||||  |||||||||| ||| ||||| ||||||||    
T  14843471 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaaga 14843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 26514549 - 26514650
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||| ||||| ||||||||||| |  ||||||| ||| || || | ||| ||||| |||||||||||||||||||| ||||||| ||| |||||    
T  26514549 ctttgaagaaagaaagagcatagacaggaagcgaggtcaagaccgacttcaaaaggaccaaacgaccaccaaaagatagaaagcgactatgccaccccga 26514648  T
Q  125 ca 126  Q
    ||    
T  26514649 ca 26514650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 13938524 - 13938656
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||| ||| |  |  |||||||||||||||||||| | ||| || ||||||||||| || ||    
T  13938524 agattatacctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagatttgagaaggatcaatcggccaccaaaagaaaggaa 13938623  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
    |||||||| || ||| |||| ||||| ||||||    
T  13938624 ccgactatgccgaccagacaatctagctttaat 13938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 14686322 - 14686210
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| || | || ||||||||| || ||||| ||||| ||||| ||| |||| || || ||||| | ||| ||| |||    
T  14686322 ttgaagaaggaaagagcatagacaggtaatgcggacaggacagaattcagaaggaccaaccgacctccataagaaaggaaacgactttgccaccccaaca 14686223  T
Q  127 gtctagatttaat 139  Q
    |||||||||||||    
T  14686222 gtctagatttaat 14686210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 12673453 - 12673318
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| |||||| | |||||||||||||| ||||||||||||| ||  ||||||||| |  | ||||| | |||||||||||| || || | |||    
T  12673453 agattatactagatggatcgttgaagaaggaaagagcatagacaggcagagcagtcaggacatacattagaaggatcaagcgaccaccgaaggaaaaaaa 12673354  T
Q  107 ccgactattccaacccgacagtctagatttaatacg 142  Q
    | |||| | |||||| | |||||||||||| |||||    
T  12673353 ctgactttgccaaccagccagtctagattttatacg 12673318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 17577051 - 17576904
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||| ||||||||| |  |  |||| |||||||||||| |||| |||||||| |||||| || ||  |    
T  17577051 agattatacctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacagatttgagcagaatcaagcgactaccaaaggaaaggta 17576952  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    || ||||| |||||| |||| |||||| || ||||| || ||||||||    
T  17576951 cctactatgccaaccagacaatctagactttatacgtttaacaatagg 17576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 17605668 - 17605521
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||| |||||||| ||||||||||| |  |  |||| ||||||||||||||| | ||| ||||||||||| || ||  |    
T  17605668 agattatacctgatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagatttgagaagtatcaaacgaccaccaaaggaaaggta 17605569  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    || | ||| |||||  |||| |||||| || |||||||| ||||||||    
T  17605568 cctattatgccaactagacaatctagactttatacgattaacaatagg 17605521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 18681897 - 18681770
Alignment:
Q  18 gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcc 117  Q
    |||||| ||||||| |||||||| || |||||||| |     ||||||||||||||||| || | ||| |||||||||||| | || |||||||||| ||    
T  18681897 gatggagctttgaaaaaggaaagagcgtagacaggaagtctagtcaggacagatttgagcaggatcaaacgaccaccaaaataaaggaaccgactatgcc 18681798  T
Q  118 aacccgacagtctagatttaatacgatt 145  Q
    |||| | || ||||| ||||||||||||    
T  18681797 aaccagtcaatctagctttaatacgatt 18681770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 32186507 - 32186622
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||| ||||| |  |||||||| |  |||||||||||||| || ||||||| |||||| || |||||||||||||| ||||| | |||    ||    
T  32186507 ctttgaagaaagaaagagtgtagacaggaagcgaggtcaggacagacttaagaagaatcaagcggcccccaaaagatagaaagcgactctgccactttga 32186606  T
Q  125 cagtctagatttaata 140  Q
    ||||||||||||||||    
T  32186607 cagtctagatttaata 32186622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 19350759 - 19350869
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||||||||||||| |||||||||| |  ||  |||| ||||| || ||||||||||| ||||| || ||||||||||| ||||| |     
T  19350759 ctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcagtacagacttaagaagaaccaaacgacccccgaaagatagaaaacgactttg 19350858  T
Q  116 ccaacccgaca 126  Q
    ||| |||||||    
T  19350859 ccaccccgaca 19350869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 12608295 - 12608371
Alignment:
Q  56 agaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctag 132  Q
    ||||| ||||||||| || |||||||||| |||||||||||||||||| |||  | |||||||| ||| ||||||||    
T  12608295 agaggacaggacagacttcagaagaaccaggcgaccaccaaaagataggaacttattattccaagccgccagtctag 12608371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 25351029 - 25351161
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||| |  ||||||| |||| | || | ||| ||||| ||||||||| | ||||||||    
T  25351029 agattatacctgacggagctttgaagaaggaaagagcatagacaggaagcgaggtcaagacaaactttaaaaggaccaaccgaccaccataggatagaaa 25351128  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
     ||||| | ||| ||||||| ||| || |||||    
T  25351129 gcgactctgccaccccgacaatctggacttaat 25351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 13563264 - 13563186
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||||||||| |||||| |||||| |||||| || ||||||    
T  13563264 agattatacctgacggagctttgaaaaaggaaagagcatagacaggcagagaggttaggacaaatttgataaaaaccaa 13563186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 15956233 - 15956159
Alignment:
Q  84 aagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||||||||||||||||| || |||||||||| |||||| |||| | ||| |||||| ||||| |||| |||||||    
T  15956233 aagcgaccaccaaaagaaaggaaccgactatgccaaccagacaatatagttttaattcgattaacaacaggttcc 15956159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 19616184 - 19616120
Alignment:
Q  36 gaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    ||||| ||||||||||||| ||||| || ||||||||| || || | ||||||||||||||||||    
T  19616184 gaaagggcatagacaggcagagaggacatgacagatttaaggaggatcaagcgaccaccaaaaga 19616120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 1104269 - 1104182
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||| |||||||||||||||| |||||||||| || ||| ||||| ||| | ||  |||  | |||||||||||||||||| |||||    
T  1104269 atggagctttgaagaaggaaagagcatagacagacagagaagtcagtacaaacttaggaacgatcaagcgaccaccaaaagaaagaaa 1104182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 22522040 - 22522083
Alignment:
Q  90 ccaccaaaagatagaaaccgactattccaacccgacagtctaga 133  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  22522040 ccaccaaaagatagaaatcgacttttccaacccgacaatctaga 22522083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 13551388 - 13551716
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13551388 agattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 13551487  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||    
T  13551488 ccgactattccaacctgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgaggattaccaccaataggcatacccagatac 13551587  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13551588 aagaaaggaacgttacctactttacaactcaacacggaagcagcctcatgtaaccaagacgacgcaatattcaccccaacaagcatactcttatgaaaat 13551687  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||| ||||||||||||||||||    
T  13551688 tcactttcaaccccgacatagcctcgaac 13551716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 25380728 - 25380409
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa-gatagaa 105  Q
    ||||||||| ||||||| |||||||||| ||||||||||||| ||||| | | |||| |||||||||||||||||||||||| || |||||| || ||||    
T  25380728 agattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataagtcaagacagatttgagaagaaccaagcggccgccaaaaagagagaa 25380629  T
Q  106 accgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggta 205  Q
    | |||||| ||||||  |||||||||||||||||||||||||||||||||||| | |||| |||||| |||  |||||| |||||||| | |||||  ||    
T  25380628 aacgactaatccaacttgacagtctagatttaatacgattcacaataggttcccaaaaacacaatctccgaatattacctccaataggtagacccatata 25380529  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaa 305  Q
    ||||||||| || || || ||||||||||| |||||  |  ||  ||| | ||||||||| |  ||||| || || | ||||||||||||||||||||||    
T  25380528 caagaaaggcacttttcccactttacaactcaacacgaacacaatctcgtttaaccaagaggtggcaatgttaacaccaacaagcatactcttatgaaaa 25380429  T
Q  306 ttcactttcaaacccgacat 325  Q
    || || ||||| | ||||||    
T  25380428 tttaccttcaatctcgacat 25380409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 28399884 - 28399651
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||| ||||| ||||||||||||| ||| ||||| || ||||| || |||| ||| || ||||||||||| |||||    
T  28399884 agattatacctgctggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagaatcaaacgtccaccaaaagagagaaa 28399785  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    || ||||| |||||||||||||||||||||||| ||||| || || |||||| | ||  | | ||| || ||||||||||| |||||||  || ||||||    
T  28399784 cctactatgccaacccgacagtctagatttaatgcgatttacgatcggttcccaaaactgaagtctccgcggattaccacctataggcaggcctaggtac 28399685  T
Q  207 aagaaaggaacgttacctactttacaacttaaca 240  Q
    || |||||||| ||||| ||||||||||| ||||    
T  28399684 aaaaaaggaactttacccactttacaactcaaca 28399651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 15018483 - 15018709
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||||  ||| |||| ||||| |||||||| ||||||||  ||||||||||| || ||    
T  15018483 agattatacctgacggagctttgaagaaggaaagtgcatagacaggccgagaagtcaagacagctttgagaacaaccaagcagccaccaaaagagaggaa 15018582  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     ||||||||||||||||||| || || ||||| |||||||||||| || ||| || ||| ||| |  ||||||||||| ||||| | || ||||| |||     
T  15018583 acgactattccaacccgacaatcgagctttaacacgattcacaattggatcccagcaacacaaacgacgaggattacccccaatcgacaaacccaagtat 15018682  T
Q  207 aagaaaggaacgttacctactttacaa 233  Q
    |||||||| || ||||| | |||||||    
T  15018683 aagaaaggcaccttacccattttacaa 15018709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 8065595 - 8065444
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||  |||||||||| |||||| ||||| || ||||||||||  | ||| || ||||| ||||| |||||    
T  8065595 agattatacctgatggagctttgaagaaggaaaaagcatagacagacaaagaagtcagaactgatttgagaatgatcaaacggccaccgaaagagagaaa 8065496  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
     |  |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  8065495 tctgctattccaacccgacaatctagatttaatacgattcacgattggttcc 8065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 35488644 - 35488795
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||| ||||||||||  ||||||||||||||||||||||| || ||||||||||| | |||||| ||||| ||||| |||||    
T  35488644 agattatacctgaaggagctttaaagaaggaaaaagcatagacaggcaaagaggtcagaactgatttgagaaggatcaagcggccaccgaaagagagaaa 35488743  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
     |   ||||||| ||||||| ||||||||||||||||||||| || ||||||    
T  35488744 tctgttattccatcccgacaatctagatttaatacgattcacgattggttcc 35488795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 11233814 - 11233680
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||| ||||||||||| ||||| || | ||| | ||| |||||||||||||| || || ||||||||  ||||    
T  11233814 ctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaaccggttatt 11233715  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| ||||||||||||||||| | ||||||||    
T  11233714 ccaacctgacagtctagatttaattctattcacaa 11233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 45422335 - 45422473
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  45422335 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaatagaaccaaacgtcctccaaaggaaagaaaccggctatt 45422434  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||||   ||||||| |||||||||||||||||||||    
T  45422435 ccaacccataagtctagctttaatacgattcacaatagg 45422473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 28253551 - 28253684
Alignment:
Q  23 aactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaaccc 122  Q
    ||||||||| |||||||||||||||||| | | ||  |||||||| || |||||||| |  | ||||||||||||||| ||||||||||||   |||||     
T  28253551 aactttgaaaaaggaaagtgcatagacatgaagagcagtcaggacggacttgagaaggattaggcgaccaccaaaagagagaaaccgactacgacaacca 28253650  T
Q  123 gacagtctagatttaatacgattcacaataggtt 156  Q
    ||||||||||||||||| ||||| |||| |||||    
T  28253651 gacagtctagatttaattcgattaacaacaggtt 28253684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 255
Target Start/End: Complemental strand, 9668340 - 9668092
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| |||||||| |||| |||||||| || |||||||||| ||| || ||||| || | ||| | ||| |||||||||||||| || || |||||    
T  9668340 agattatatctgatggagctttaaagaaggacagagcatagacagacaacgaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaa 9668241  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggta 205  Q
    |||  |||||||||| |||| |||||||||||| | |||||||| ||| ||| | ||||| ||  |  || |||||||| || ||||| | ||| || ||    
T  9668240 ccggttattccaacctgacaatctagatttaattctattcacaacagggtccca-aaacgaaagacgacgcggattaccccctataggtaaaccaagata 9668142  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagcagcctcat 255  Q
    || ||||||||  || || |||||||| |||||||| ||||| |||||||    
T  9668141 catgaaaggaatcttgcccactttacatcttaacaccgaagccgcctcat 9668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 33515518 - 33515389
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||||||| |||||| |||||| ||  |||| ||||||||| || ||||||||||     
T  33515518 ctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgcgaagaatcagacgactaccaaaagaaaggaaccgactatg 33515419  T
Q  116 ccaacccgacagtctagatttaatacgatt 145  Q
    |||||| |||| ||||||||| ||||||||    
T  33515418 ccaaccagacaatctagattttatacgatt 33515389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 12646374 - 12646499
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| ||||||||||| |  |  || ||||| |||||||||||||  | |||||||||||| || || |||||||||| |||||  ||    
T  12646374 ctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaattaggcgaccaccaaaggagaggaaccgactatgccaacttga 12646473  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
    || |||||||||||||||||| ||||    
T  12646474 caatctagatttaatacgattaacaa 12646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 22724755 - 22724654
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||| ||||||||||| |||||||||| || |||||||| ||| ||||| ||||||||||| |  ||||||||||| || || | |||||||||||||||    
T  22724755 ctttaaagaaggaaagagcatagacagacagagaggtcatgactgatttaagaagaaccaatcagccaccaaaagagaggaaacaactattccaacccga 22724656  T
Q  125 ca 126  Q
    ||    
T  22724655 ca 22724654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 6824235 - 6824348
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| || || || || ||||||| ||| ||| | | ||| ||||     
T  6824235 ctttgaagaaggaaagtgcatagacagg--aagcggtcaggacagatttaagaagaactaaacggcctccgaaagataaaaagcgaatttgccaccccgt 6824332  T
Q  125 cagtctagatttaata 140  Q
     |||||||| ||||||    
T  6824333 tagtctagacttaata 6824348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 22724560 - 22724508
Alignment:
Q  279 accctaacaagcatactcttatgaaaattcactttcaaacccgacatagcctc 331  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  22724560 accccaacaagaatactcttatgaaaattcactttcaaacccgacatatcctc 22724508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 26147041 - 26147129
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  26147041 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 26147129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 10289382 - 10289249
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| ||||||||||| |  ||||||||||| || || || ||||| |  |||||||||||||| |||   |  || |||||||| ||    
T  10289382 ctttgaagaaggaaagagcatagacaggaagcgaggtcaggaccgacttcaggagaacaagacgaccaccaaaagaaagatgtctgcttttccaaccgga 10289283  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    ||| | |||||||||||| || |||| |||||||    
T  10289282 caggcgagatttaatacggttgacaacaggttcc 10289249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 33583762 - 33583629
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||||||| |  |||||||||||| | ||||||| ||| || || || ||  | ||||||||    
T  33583762 agattatacctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaggacaaacttgagaaaaacgaaccggcccccggatgatagaaa 33583663  T
Q  107 ccgactattccaacccgacagtctagatttaata 140  Q
     ||||| | ||| ||||||| |||||||||||||    
T  33583662 tcgactttgccaccccgacaatctagatttaata 33583629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 2207136 - 2207021
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | || || ||| || || | ||||| ||| ||||| ||||| || ||||||||||| | |||||  ||||    
T  2207136 ttgaagaaggaaagagcatagacaggtagcgcggacaagacggactttacaagaatcaaacgacctccaaaggaaagaaaccgactttgccaactggaca 2207037  T
Q  127 gtctagatttaatacg 142  Q
    ||||||||||||||||    
T  2207036 gtctagatttaatacg 2207021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 13416512 - 13416627
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||| | |  | ||||| || ||| || ||||||| ||||||||| ||||| || ||||||||||| | ||||   ||||    
T  13416512 ttgaagaaggaaagagcatagacatgtagcgcggtcaagatagactttagaagaatcaagcgacctccaaatgaaagaaaccgactttgccaattagaca 13416611  T
Q  127 gtctagatttaatacg 142  Q
    |||||||||| |||||    
T  13416612 gtctagattttatacg 13416627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 34357634 - 34357729
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaaccc 122  Q
    |||||||||||||| ||||||||||| ||| ||||||  | ||| ||||||||||  || |||||||||||||| | |||| |||| ||| |||||    
T  34357634 ttgaagaaggaaagagcatagacaggtaaaaaggtcaaaagagacttgagaagaattaaacgaccaccaaaagacaaaaactgacttttcaaaccc 34357729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 10689364 - 10689452
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||| | || |||||||| ||  | || ||||| |||| ||||||||||||    
T  10689364 ttgaagaaggaaagagcatagacaggtagagaggtcaagacatactttagaagaactaactggccgccaaacgataaaaaccgactatt 10689452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 44028547 - 44028412
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| | |||||||||||||| ||||||||||  | || ||||| |||||| || || ||||  || ||  |||| || || |||||    
T  44028547 agattatacatgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagactttaggagaattaaacggtcaccgaaggagagaaa 44028448  T
Q  107 ccgactattccaacccgacagtctagatttaatacg 142  Q
    |||||| | |||| | |||||||||||||| |||||    
T  44028447 ccgactttgccaatcagacagtctagattttatacg 44028412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20946914 - 20946828
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    |||| ||| ||||||| || ||||| ||||| |||||||| || | |||||||||||| || | |||||||||||| || |||||||    
T  20946914 ctgacggagctttgaaaaaagaaagggcataaacaggcaacgacgacaggacagatttcagtaaaaccaagcgacccccgaaagata 20946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 2282606 - 2282683
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    |||||||||||||||| ||||| ||||| | |||||||| |||||| || |||| |||||   | |||||||||||||    
T  2282606 ctttgaagaaggaaagggcatacacaggaagagaggtcatgacagacttaagaataaccagatgcccaccaaaagata 2282683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 4222256 - 4222175
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||||||||| ||||||||| | |  |||| || |||||| |||||||||||||  ||||| ||||| || |||||    
T  4222256 ctttgaagaaggaaagagcatagacaagaatggaggacatgacagacttgagaagaaccagacgacccccaaatgaaagaaa 4222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 32191871 - 32192000
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| || || |||| | |||| || || ||||  ||| |||| || |||| ||| | |||||||||||| ||||| | ||| ||    
T  32191871 ctgaaggagctttgaagaaagagagagcatggccaggtaacgaagtcaatacaaatttaaggagaatcaaacaaccaccaaaagaaagaaagcaactctt 32191970  T
Q  116 ccaacccgacagtctagatttaatacgatt 145  Q
    |||||| |||| |||||||||||| |||||    
T  32191971 ccaaccagacaatctagatttaatgcgatt 32192000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 20004751 - 20004883
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| |||| || ||||||||||||| || | ||||||||| || || |||||||||   || || | || ||| |||||||||||||| | |||    
T  20004751 agattatacctgatagagctttgaagaaggagagagtatagacaggtaacgaagtcaggacaatcttaaggaaaatcaaacgaccaccaaaagacaaaaa 20004850  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
      || | |||||||| |||| ||||||||||||    
T  20004851 gtgaatcttccaaccagacaatctagatttaat 20004883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 43311085 - 43311173
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||| | |  ||||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  43311085 ttgaagaaggaaagagcatagacaggtagagagataaaaacagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 43311173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 20675841 - 20676169
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| | |||    
T  20675841 agattatacctgctggagctttgaagaatgaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagaaaaa 20675940  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  20675941 ccgactattacaacccgacagtctagatttaatacgattcacaataggttcctagaaacacaatcttcgagggttaccaccaataggcatacctaggtac 20676040  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||| | ||  | |||||||||||||| ||||| |||||||| |||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  20676041 aagaaatggacacttcctactttacaactcaacacggaagcagcttcatttaaccaagacgacccaatattcacccccacaagcatactcttatgaaaat 20676140  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||||| ||||    
T  20676141 tcactttcaaacccgacatagccttgaac 20676169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 55299427 - 55299755
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  55299427 agattatacctgttggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaa 55299526  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| | ||||||    
T  55299527 ccgactattccaacccgacaatctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatatctaggtac 55299626  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| ||  | || ||||||||||| ||||| || |||||||||| |||||| |||||| ||||||||||||  || |||||||||||||||||||    
T  55299627 aagaaagggacaattccaactttacaactcaacacggatgcagcctcatataaccaggacgacccaatattcacccccaccagcatactcttatgaaaat 55299726  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||||||||||    
T  55299727 tcactttcaaacccgacatagcctcgaac 55299755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 323
Target Start/End: Complemental strand, 23872811 - 23872495
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  23872811 agattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaa 23872712  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||    
T  23872711 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtac 23872612  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| ||  | || ||||||||||| ||||| || ||||| |||| |||||| |||||| ||||||||||||  || |||||||||||||||||||    
T  23872611 aagaaagggacagttccaactttacaactcaacacggatgcagcttcatataaccaggacgacccaatattcacccccaccagcatactcttatgaaaat 23872512  T
Q  307 tcactttcaaacccgac 323  Q
    |||||||||||||||||    
T  23872511 tcactttcaaacccgac 23872495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 29553135 - 29552811
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||||| ||| |||| ||||| ||||||||||||||| |||||||||||||| || ||    
T  29553135 agattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaagaaccaaacgaccaccaaaagaaaggaa 29553036  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     | ||||||||||||||||||||||| | ||||||||||||||||||| ||| | |||| |||||| |||||||| ||||||||||||||||||| |||     
T  29553035 acaactattccaacccgacagtctagttctaatacgattcacaataggatcccaaaaacacaatctccgaggatttccaccaataggcatacccaagtat 29552936  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    | |||||| || | ||| ||||||||| ||||||| |||||  |||||  |||||| || |  | ||| || ||||  | ||||||||||||||||||||    
T  29552935 aggaaaggcacttgacccactttacaatttaacacggaagcgacctcaactaaccaggaaggggtaatgttaaccccgataagcatactcttatgaaaat 29552836  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    ||||||||||||| ||||| |||||    
T  29552835 tcactttcaaacctgacattgcctc 29552811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 19648510 - 19648825
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||| || ||| ||||||| || || ||||||||    
T  19648510 ctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccagcaaaagagaggaaacgactatt 19648609  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||| ||||||||| ||||||||||||| ||| ||| |||||| ||| |  ||||||||||||||||| ||||| |||| ||| ||||||||     
T  19648610 ccaacctgacactctagattttatacgattcacaacagggtcccagaaacacaaacgacgaggattaccaccaatcggcatgcccaagtataagaaaggc 19648709  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||||||| ||| |||||| |||||||||  ||||||||| || ||||| || |||| ||| ||   |||||| | |||||| |||||||    
T  19648710 acctttcccactttacaatttagcacagacgcagcctcaaataaccaagaagaagcaatgttaaccccaaccagtgaactcttgttaaaattaactttca 19648809  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||| ||||||    
T  19648810 aaccagacaaagcctc 19648825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 8935880 - 8936127
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||||| || ||||||||  |||||||||||||||||||| || | ||||||||| || ||    
T  8935880 agattatacctgacggagctttgaagaaggaaagagcatagacagacagagaggtcaacacagatttgagaagaaccaaacggcaaccaaaagagaggaa 8935979  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| |||||||||| ||| ||||||||||||| ||| ||| |||||| ||| | ||||||||| |||||||| |||||||||| |||     
T  8935980 acgactattccaacctgacagtctagtttttatacgattcacaacagggtcccagaaacacaaacgtcgaggattcccaccaatcggcatacccaagtat 8936079  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    |||||||| || || || ||||||||| ||| |||||| |||||||||    
T  8936080 aagaaaggcacctttcccactttacaatttagcacagacgcagcctca 8936127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 19115242 - 19115468
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| || ||| |||| ||||| |||||||||||||||||| ||||||||||| || ||    
T  19115242 agattatacctgacggagctttgaagaaggaaagtgcatagacagacagagaagtcaagacagctttgagaagaaccaagcggccaccaaaagagaggaa 19115341  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||||||||||| || ||||| ||||||||||||||| ||| |||||| ||| |  ||||||||||| ||||| |||| ||||| |||     
T  19115342 acgactattccaacccgacagtcgagctttaacacgattcacaataggatcccagaaacacaaacgacgaggattacccccaatcggcaaacccaagtat 19115441  T
Q  207 aagaaaggaacgttacctactttacaa 233  Q
    ||||| || || ||||| |||||||||    
T  19115442 aagaatggcaccttacccactttacaa 19115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 34976747 - 34977071
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| || | ||||||||| || || |||||||||| |||    
T  34976747 agattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaaccaaacggccgccaaaagataaaaa 34976846  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
      ||||||||||||| ||||  |||| ||| || ||| |||||||||||||| | |||| |||||  |||| ||| |  |||||||||||||||| ||||    
T  34976847 atgactattccaaccagacaacctagcttttatgcgactcacaataggttcccaaaaactcaatcgccgagaatttctcccaataggcatacccaagtac 34976946  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    || ||  | || ||||| ||||| || ||||| | ||| ||  |||||| ||||||||| |  || ||| |||| | ||| |  ||||||||||||||||    
T  34976947 aaaaacagcaccttacccactttgcagcttaaaatagacgccacctcatttaaccaagatggggcgatactcacaccaaccaatatactcttatgaaaat 34977046  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    |||| |||||||| |||||||||||    
T  34977047 tcaccttcaaaccggacatagcctc 34977071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 330
Target Start/End: Complemental strand, 10562658 - 10562335
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||| || ||||||||| ||||| || | |||||||| |||||| | |||||||| |||    
T  10562658 agattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaaccaggcgaccgctaaaagataaaaa 10562559  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
      ||||||||||||| ||||  || | |||||| |||||||||| ||||||| |||||| |||||  |||| ||| || || ||||||||||||| ||||    
T  10562558 atgactattccaaccagacaaccttgctttaatgcgattcacaaaaggttcccagaaactcaatcgccgagaatttcccccgataggcatacccaagtac 10562459  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    |  || || || || || ||||| ||||| || ||||| |  ||||||  ||||||||| |  || |||||||| || | ||||| ||||||||||||||    
T  10562458 acaaacggcaccttgcccactttgcaactcaaaacagacgttgcctcacttaaccaagaaggagcgatattcacaccaaccaagc-tactcttatgaaaa 10562360  T
Q  306 ttcactttcaaacccgacatagcct 330  Q
    ||||| ||||| |||||||| ||||    
T  10562359 ttcaccttcaatcccgacatggcct 10562335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 26694734 - 26694965
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||| ||||| ||||||||||||| ||| ||||| || |||||||| |||| |||||| ||||||||||| |||||    
T  26694734 agattatacctgttggagctttgaagaaagaaagggcatagacaggcagagatgtcagaactgatttgaggagaatcaagcggccaccaaaagagagaaa 26694833  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     | |||||||||||||| ||||||||||||||| |||||||| || |||||| | ||  | | ||| || ||||||||||| |||||||  || ||||||    
T  26694834 tctactattccaacccgtcagtctagatttaatgcgattcacgatcggttcccaaaactgaagtctccgcggattaccacctataggcaggcctaggtac 26694933  T
Q  207 aagaaaggaacgttacctactttacaacttaa 238  Q
    || |||||||   |||| |||||||| |||||    
T  26694934 aaaaaaggaattctacccactttacagcttaa 26694965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 42779056 - 42779380
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||| || ||||||||  ||||| || |  | |||||  || || ||||||||||||||    
T  42779056 agattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcaaaacagacttcaacaaaaccagacggccgccaaaagatagaaa 42779155  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     ||||||||||| || ||||  |||| |||||| |||||||||| ||||||| | |||| ||| |   ||| ||| || ||||||||||| |||| ||||    
T  42779156 acgactattccacccagacaacctagctttaatgcgattcacaaaaggttcccaaaaactcaaacgcagagaatttcccccaataggcatgcccaagtac 42779255  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    || || || || ||||| ||||| || ||||| ||||| || ||||||  ||||||||| |  || |||||||| | ||| |   |||||||||||||||    
T  42779256 aaaaacggcaccttacccactttgcagcttaaaacagacgccgcctcacttaaccaagagggagcgatattcacaccaaccaaactactcttatgaaaat 42779355  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    |||| |||||||| ||||| |||||    
T  42779356 tcaccttcaaaccagacatggcctc 42779380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 23641907 - 23641774
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  23641907 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 23641808  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  23641807 caatctagatttaatacgatccaccacaggttcc 23641774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 1827874 - 1827723
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| ||||| || ||    
T  1827874 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaagaatcaaacggccaccgaaagagaggaa 1827775  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| |||| |||||||||||||||||||||||||||||||    
T  1827774 ccgactttgccaaccagacaatctagatttaatacgattcacaataggttcc 1827723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 7662633 - 7662395
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  7662633 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 7662534  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||||   ||||||| |||||| |||||||||||||| ||| | ||||  |  |  || |||||||| ||||||||||  |||| |||||  ||||||    
T  7662533 ccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggattacccccaataggcaagcccaagtacataaaagga 7662434  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| |||||||| || | ||| ||||| ||||||    
T  7662433 accttacccactttacagctcagcactgaagctgcctca 7662395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 23647565 - 23647432
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| |||  ||||||| |||||||| |||||||| | |||||| ||    
T  23647565 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaatgaccaccgaaagataggaaccgactttgccaaccaga 23647466  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  23647465 caatctagatttaatacgatccaccacaggttcc 23647432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 42952865 - 42952625
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || |||| |||    
T  42952865 agattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacgataaaaa 42952766  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacg-caatcttcgaggattaccaccaataggcatacccaggta 205  Q
    ||| ||||||||||| |||||||||||||||||   |||||||| ||| ||| | ||||| ||| |  || |||||||| | |||||| | ||| |||||    
T  42952765 ccggctattccaacctgacagtctagatttaattttattcacaaaagggtccca-aaacgacaaacgacgtggattacccctaataggaagaccaaggta 42952667  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagc 247  Q
    || ||||||||  || ||  |||||||||| ||||| |||||    
T  42952666 catgaaaggaatcttgccccctttacaactcaacactgaagc 42952625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 47419628 - 47419761
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||||||||| |||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  47419628 ctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 47419727  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  47419728 caatctagatttaatacgatccaccacaggttcc 47419761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 19756092 - 19756224
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    |||||| |||||||||||||||||||| |  |  |||||||| || || || |||| ||| |||||||| ||||| || |||||||| | |||||| |||    
T  19756092 tttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgccaaccagac 19756191  T
Q  126 agtctagatttaatacgattcacaataggttcc 158  Q
    | ||||||||||||||||||||||| |||||||    
T  19756192 aatctagatttaatacgattcacaacaggttcc 19756224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 19783714 - 19783582
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    |||||| |||||||||||||||||||| |  |  |||||||| || || || |||| ||| |||||||| ||||| || |||||||| | |||||| |||    
T  19783714 tttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgccaaccagac 19783615  T
Q  126 agtctagatttaatacgattcacaataggttcc 158  Q
    | ||||||||||||||||||||||| |||||||    
T  19783614 aatctagatttaatacgattcacaacaggttcc 19783582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 19733322 - 19733184
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||||||| |  |  |||||||||||||||||||| | ||| |||||||||||||| || ||    
T  19733322 agattatacctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacagatttgagaaggatcaatcgaccaccaaaagaaaggaa 19733223  T
Q  107 ccgactattccaacccgacagtctagatttaatacgatt 145  Q
    |||||||| | ||||  ||| ||||| |||||| |||||    
T  19733222 ccgactatgctaaccaaacaatctagctttaattcgatt 19733184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 2072346 - 2072478
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| |||| ||| |||||||||| ||||| ||||||||| ||| |||||||| |||| |||||||||||||||| || || || || || |||||    
T  2072346 agattatatctgacggagctttgaagaaagaaagagcatagacatgcagagaggtcatgacaaatttgagaagaaccaaccggcctccgaaggagagaaa 2072445  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
     ||||| | ||| ||||| |||||||| |||||    
T  2072446 acgactttgccaccccgatagtctagacttaat 2072478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 2365830 - 2365945
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    |||||| ||||| ||  |||||||||| || || |||| |||||| || || | |||||| |||||||||||||| ||||| ||||| |||||||| |||    
T  2365830 tttgaaaaaggagagaacatagacaggtaaggaagtcaagacagacttaaggataaccaatcgaccaccaaaagacagaaaacgactcttccaaccagac 2365929  T
Q  126 agtctagatttaatac 141  Q
    | ||||||||||||||    
T  2365930 aatctagatttaatac 2365945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 9691244 - 9691361
Alignment:
Q  22 gaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacc 121  Q
    ||||||||||||||||||| ||||| ||||| |  || || |||||||| ||||||||||| || |||||  |||| |||||||| ||||| | ||| ||    
T  9691244 gaactttgaagaaggaaagagcataaacaggaagcgaagtaaggacagacttgagaagaactaaccgaccctcaaaggatagaaaacgactttgccaccc 9691343  T
Q  122 cgacagtctagatttaat 139  Q
    ||| | ||||||||||||    
T  9691344 cgataatctagatttaat 9691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 40688905 - 40689022
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| ||||||||||  |  |  |||| |||||| || | ||||| ||||||||| |||||||| ||||||||||| | |||||  ||    
T  40688905 ctttgaagaaggaaagagcatagacagatagcgcagtcaagacagactttaaaagaatcaagcgacctccaaaagaaagaaaccgactttgccaactaga 40689004  T
Q  125 cagtctagatttaatacg 142  Q
    |||||||||||| |||||    
T  40689005 cagtctagattttatacg 40689022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 331
Target Start/End: Original strand, 20396472 - 20396695
Alignment:
Q  108 cgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtaca 207  Q
    |||||||||||||| ||||  |||| ||| || |||||||||||||||||| | |||| ||| |  |||| ||| ||  | ||||||||||| | |||||    
T  20396472 cgactattccaaccagacaacctagcttttatgcgattcacaataggttcccaaaaactcaaacgccgagaatttccctcgataggcatacctaagtaca 20396571  T
Q  208 agaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaac-aagcatactcttatgaaaat 306  Q
    | || || || ||  | ||||| || | ||| ||||| || ||||||  ||||||||| |  || |||||||| | ||| |||| |||||||||||||||    
T  20396572 aaaacggcaccttgtccactttgcatcctaaaacagacgccgcctcacttaaccaagagggagcgatattcacaccaaccaagc-tactcttatgaaaat 20396670  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    |||| |||||||| |||||||||||    
T  20396671 tcaccttcaaaccggacatagcctc 20396695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 3129301 - 3129194
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||  ||||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| ||||| ||||| ||||| || ||||| || | |||    
T  3129301 ctgatggagttttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaacgacctccaaaggaaagaaatcggcaatt 3129202  T
Q  116 ccaacccg 123  Q
    ||||||||    
T  3129201 ccaacccg 3129194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 48312900 - 48313043
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| |  |  |||| |||  ||||||||||||  |  |||| ||||||||| || ||    
T  48312900 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcatgacgaatttgagaagaattagacgacgaccaaaagaaaggaa 48312999  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||||| |||||| |||| ||||| |||||||| ||| ||||    
T  48313000 ccgactatgccaaccagacaatctagttttaatacaattaacaa 48313043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 53486263 - 53486144
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| |||||| |||||||||||||||   |||||||||| | ||||||||| ||||| || |  | |||||  || || ||||||||||||||    
T  53486263 agattatacttgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagactttaacaaaaccagacggccgccaaaagatagaaa 53486164  T
Q  107 ccgactattccaacccgaca 126  Q
     |||||||||||||| ||||    
T  53486163 acgactattccaaccagaca 53486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 11586464 - 11586366
Alignment:
Q  60 gtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||||||||| |||| ||||| |  | ||||||||||||||| || |||||||| ||||| |  ||||||||||||||||| ||||| |||| |||||||    
T  11586464 gtcaggacaaattttagaaggattaggcgaccaccaaaagaaaggaaccgactcttccatctagacagtctagatttaattcgattaacaacaggttcc 11586366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 29328095 - 29327989
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    ||||||||||||||  |||||||||| | |||||||| |||| | || |||||||  ||||||| |||||| || || |||||||| ||| |||| ||||    
T  29328095 ttgaagaaggaaagaccatagacaggtagagaggtcaagacaaactttagaagaattaagcgactaccaaacgacaggaaccgacttttcaaacctgaca 29327996  T
Q  127 gtctaga 133  Q
    |||||||    
T  29327995 gtctaga 29327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 55724985 - 55724903
Alignment:
Q  63 aggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgatt 145  Q
    ||||| ||||||||||||| || |||||||||||| || || |||||||||| ||||   |||| ||||||||||||||||||    
T  55724985 aggacggatttgagaagaatcaggcgaccaccaaaggagaggaaccgactatgccaaatagacaatctagatttaatacgatt 55724903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 38296531 - 38296616
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgact 112  Q
    |||||||||||||| ||||||||||| | ||||||||  ||||| |||||||| || || || |||||||| || |||||||||||    
T  38296531 ttgaagaaggaaagagcatagacaggtagagaggtcaaaacagacttgagaaggactaaacggccaccaaatgacagaaaccgact 38296616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 3129157 - 3129082
Alignment:
Q  179 attaccaccaataggcatacccaggtacaagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    |||||| ||||||||||  |||| ||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||    
T  3129157 attacccccaataggcaagcccaagtacaagaaaggaaccttacccactttgcaactcaacaccgaagctgcctca 3129082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 19162483 - 19162368
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | ||||| |||| | || | ||||| ||||||||| ||||| || ||||||| ||| | |||||  ||||    
T  19162483 ttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatcaagcgacctccaaaggaaagaaacctactttgccaactagaca 19162384  T
Q  127 gtctagatttaatacg 142  Q
    |||||||| |||||||    
T  19162383 gtctagatctaatacg 19162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 29133687 - 29133762
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||||||||||||||| ||||||||||  | |||||||| |||||| || |||||||| | ||| |||||||||||    
T  29133687 ctttgaagaaggaaagagcatagacagagagagaggtcaagacagacttaagaagaacaaggcggccaccaaaaga 29133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 15342644 - 15342714
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccacca 95  Q
    ||||||| |||||||| |||||||||||||| |  | || ||||||||| ||||||||||| |||||||||    
T  15342644 ctttgaaaaaggaaagggcatagacaggcaatgctgacacgacagatttaagaagaaccaaacgaccacca 15342714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 55464206 - 55464122
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    ||||| || |||||||||||||||| ||||||||| ||| ||| ||||  ||||| || ||||| | ||| ||||||||||||||    
T  55464206 ctgattgagctttgaagaaggaaagagcatagacatgcagagaagtcaatacagacttaagaaggatcaaacgaccaccaaaaga 55464122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 23641639 - 23641604
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23641639 actcttatgaaaattaactttcaaacccgacatagc 23641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 23647297 - 23647262
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23647297 actcttatgaaaattaactttcaaacccgacatagc 23647262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 47419896 - 47419931
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  47419896 actcttatgaaaattaactttcaaacccgacatagc 47419931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 9691441 - 9691547
Alignment:
Q  219 ttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaac 318  Q
    ||||| ||||||||| |||| ||||| |  ||||||| |||||||||   | |||| || || | ||| |||| ||||||||||||||||||||| ||||    
T  9691441 ttacccactttacaatttaaaacagatgacgcctcatttaaccaagaatccccaatgttaactccaaccagcaaactcttatgaaaattcacttttaaac 9691540  T
Q  319 ccgacat 325  Q
    | |||||    
T  9691541 cagacat 9691547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 43516082 - 43516004
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    ||||||||| ||||||| | |||||||||||||| ||||||||||| || |  ||||||||||| || ||||| |||||    
T  43516082 agattatacctgatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagactttagaaggaccaa 43516004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 12079234 - 12079157
Alignment:
Q  21 ggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa 98  Q
    ||||||||||||||  |||| ||||||||||| |   ||| ||||||| | || |||||||| |||||||||||||||    
T  12079234 ggaactttgaagaataaaagagcatagacagggagcaaggccaggacaaactttagaagaactaagcgaccaccaaaa 12079157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 20396388 - 20396432
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacag 51  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  20396388 agattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 26 - 331
Target Start/End: Complemental strand, 16375418 - 16375113
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  16375418 tttgaagaaggaaagtgtatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaacctaac 16375319  T
Q  126 agtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttaccta 225  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || || ||||    
T  16375318 agtctagatttaatacggttcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcataccaaggtacaagaaagggacatttccta 16375219  T
Q  226 ctttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacccgacat 325  Q
    |||||||||| ||||| |||||||| || | ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16375218 ctttacaactcaacacggaagcagcttcgtttaaccaagacgacccaatattcacccccacaagcatactcttatgaaaattcactttcaaacccgacat 16375119  T
Q  326 agcctc 331  Q
    ||||||    
T  16375118 agcctc 16375113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 4987390 - 4987076
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||| || ||||||||||| || || ||||||||    
T  4987390 ctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagaaaggaaacgactatt 4987291  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||| |||||| ||| |  ||||||||||||||||| |||||||||| ||| ||||||||     
T  4987290 ccaacctgacagtctagattttacacgattcacaacagggtcccagaaacacaaacgacgaggattaccaccaatcggcatacccaagtagaagaaaggc 4987191  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||||||| ||| |||||| |||||||||  ||||||||| || ||||| || |||| ||| |||| |||||| | |||||| |||||||    
T  4987190 acctttcccactttacaatttagcacagatgcagcctcaaataaccaagaagaagcaatgttaaccccaaccagcaaactcttgttaaaattaactttca 4987091  T
Q  316 aacccgacatagcct 330  Q
    |||| |||| |||||    
T  4987090 aaccagacaaagcct 4987076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 330
Target Start/End: Original strand, 36157960 - 36158282
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||| |||| |||| | |||||||| ||  || | |||||| | |||    
T  36157960 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatattttaaaagaacca-gctgcctctaaaagagaaaaa 36158058  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     || ||||||||||| ||||  |||  ||||||  ||||||||||||| ||| |||||| |||||  ||||||||||| ||||||| |||||||||||||    
T  36158059 acgtctattccaaccagacatcctaactttaatctgattcacaataggatcccagaaactcaatcgccgaggattacctccaatagacatacccaggtac 36158158  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |  ||||| || || || ||||| |||||||| ||||| || ||| ||| ||||||||| |  | |||||| || | ||| |  || ||||||||||| |    
T  36158159 ataaaaggcacattgcccactttgcaacttaaaacagatgccgccccatttaaccaagagggagaaatattgacaccaactaaaatgctcttatgaaagt 36158258  T
Q  307 tcactttcaaacccgacatagcct 330  Q
    |||| |||||||| ||||||||||    
T  36158259 tcaccttcaaacctgacatagcct 36158282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 17659647 - 17659971
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||||||||||||||||||||||| || |  | |||||  || || ||||||||||  ||    
T  17659647 agattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagactttaacaaaaccagacggcctccaaaagataagaa 17659746  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||| ||||  ||||  |||| ||| ||||||||||||||||| |||||||||| ||| |  |||| ||| || || ||||||||||| | ||||    
T  17659747 acgactatttcaacaagacaacctagcttttatacgattcacaataggatcctagaaactcaaacgccgagaatttcccccgataggcatacctaagtac 17659846  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    |  || || || || || ||||| || | | | ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||    
T  17659847 ataaacggcaccttgcccactttgcagcctcaaacagacgccgcctcacttaaccaagatgaagcgatattcacacccaccaagc-tactcttatgaaaa 17659945  T
Q  306 ttcactttcaaacccgacatagcctc 331  Q
    ||||| |||||||| |||||||||||    
T  17659946 ttcaccttcaaaccagacatagcctc 17659971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 23942893 - 23943044
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||| ||||| |||||    
T  23942893 agattatacatgatggagctttgaagaaggaaagagcatagacaggcaaagaagtcagaactgatttgagaaggatcaagcggccaccgaaagagagaaa 23942992  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
     |  |||||||||||||||| |||||||||||| |||||||| || ||||||    
T  23942993 tctgctattccaacccgacaatctagatttaattcgattcacgattggttcc 23943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 45255174 - 45254856
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||| ||||| |||||||||| ||  |||||||| ||||| || | ||||||||  || || ||||||||||  ||    
T  45255174 agattatacctgatggagctttgaagaatgaaagcgcatagacagacagcgaggtcagaacagactttaaaagaaccagacggccgccaaaagataagaa 45255075  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| || |  || | ||||||||||||||  ||||||||| | || | ||| |  |||| ||| || || ||||||||||||| ||||    
T  45255074 acgactattccaaccagataaccttgctttaatacgattcaagataggttcccaaaagctcaaacgccgagaatttcccccgataggcatacccaagtac 45254975  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    || || |  || || || ||||| |||||||| ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||    
T  45254974 aaaaacgacaccttgcccactttgcaacttaaaacagacgccgcctcacttaaccaagaagaagcgatattcacaccaaccaagc-tactcttatgaaaa 45254876  T
Q  306 ttcactttcaaacccgacat 325  Q
    ||||| || ||||| |||||    
T  45254875 ttcaccttaaaacctgacat 45254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 7925210 - 7925343
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| ||||||||   |||||| ||    
T  7925210 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgacttgnccaaccaga 7925309  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  7925310 caatctagatttaatacgatccaccacaggttcc 7925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 7453158 - 7453305
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||| | ||| |||| ||||||||| | ||||||||  || || ||||| || |||||    
T  7453158 agattatacctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtcaagacagattttaaaagaaccagacgtcctccaaaggaaagaaa 7453257  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||| |||||||||||||  ||||||| |||||  ||||||||||||||    
T  7453258 ccggctattccaacccgtaagtctagctttaactcgattcacaatagg 7453305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 43611525 - 43611337
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| |||| |||||||||||||  |||  ||||||||||| | ||| ||||| || | ||| ||||| | |||||| ||||| |||||||||||    
T  43611525 agattatacctgatagaactttgaagaataaaaaggcatagacaggaagagaagtcagaactgctttaagaaggatcaagcggccaccgaaagatagaaa 43611426  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacg-caatcttcgaggattaccaccaataggca 195  Q
    ||  |||||||||||||| ||||||||||||||  ||||||||||||| ||| | |||||  | |||| | |||||||||||||||||||    
T  43611425 cctgctattccaacccgatagtctagatttaatgtgattcacaatagggtccca-aaacgatattctttgcggattaccaccaataggca 43611337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 41664703 - 41664551
Alignment:
Q  7 tagattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 105  Q
    |||||||||| ||| ||| ||||||| ||||||||||| ||||||||   ||  |||||||| || || || |||| ||| |||||||| |||||||| |    
T  41664703 tagattatacctgacggagctttgaaaaaggaaagtgcgtagacaggtggagcagtcaggacggactttagtagaatcaaacgaccaccgaaagatagga 41664604  T
Q  106 accgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||||||| | |||||| |||| ||||||||||||||||||||||| |||||||    
T  41664603 accgactttgccaaccagacaatctagatttaatacgattcacaacaggttcc 41664551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 43612519 - 43612372
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||| ||||| ||||||||| | | ||| ||||| || | ||| ||||| | ||| || ||||| |||||||||||    
T  43612519 agattatacctgatggagctttcaagaatgaaagggcatagacatgaagagaagtcagaactgctttaagaaggatcaaacggccaccgaaagatagaaa 43612420  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||  |||||||||||||||| |||||||||||| ||||||||||||||    
T  43612419 cctgctattccaacccgacaatctagatttaatgcgattcacaatagg 43612372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 6901755 - 6901885
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccacc-aaaagatagaaaccgactattcc 117  Q
    ||||| |||||||||||||||| ||||||||| ||| ||| ||||| |  ||||| || || | |||| | ||||| |||||| |||||||| |||||||    
T  6901755 atggagctttgaagaaggaaagggcatagacatgcagagaagtcagaatcgatttaaggaggatcaagtggccaccgaaaagagagaaaccggctattcc 6901854  T
Q  118 aacccgacagtctagatttaatacgattcac 148  Q
    ||||||||| |||||||||||||||||||||    
T  6901855 aacccgacaatctagatttaatacgattcac 6901885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 32267378 - 32267511
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| | ||  |||| ||| || ||  |||||| ||| |||||||| ||||| || |||||||| | |||||| ||    
T  32267378 ctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaatcaaacgaccaccgaaagaaaggaaccgactttgccaaccaga 32267477  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||| ||||||| |||||||    
T  32267478 caatctagatttaatacggttcacaacaggttcc 32267511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 11393665 - 11393533
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||| ||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || | || |||    
T  11393665 agattatacctgatggagctttaaagaatgaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacggtaaaaa 11393566  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
    ||| ||||||||||| |||||||||||||||||    
T  11393565 ccggctattccaacctgacagtctagatttaat 11393533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 24794526 - 24794658
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || |||| |||    
T  24794526 agattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacgataaaaa 24794625  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
    ||| | |||||||||  ||||||||||||||||    
T  24794626 ccggcgattccaacctaacagtctagatttaat 24794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 43249138 - 43249006
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| |||||||||||| |||||| |||| |||| || |||||||||  |||| || | ||| | ||| ||||||||||||||||| || |||||    
T  43249138 agattatacctgatggaactttaaagaagaaaagagcatggataggcaaagaattcagaactgctttcaaaaggaccaagcgaccaccaaacgagagaaa 43249039  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
    |||  |||||||||| |||| ||||||||||||    
T  43249038 ccggttattccaacctgacaatctagatttaat 43249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 12332663 - 12332762
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| | ||||||||||| || ||||||||||| | |||||||| |||||| || ||||||||||| || |||||||| |||| ||||||||||||    
T  12332663 ctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaaccaaacggccaccaaacgataaaaaccgactatt 12332762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 13878821 - 13878678
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| |  |  ||||||||  ||||||||||||  |  |||||||||||||| || ||    
T  13878821 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaattagacgaccaccaaaagaaaggaa 13878722  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||||| |||||| |||| || || |||||||||||| ||||    
T  13878721 ccgactatgccaaccagacaatcgagttttaatacgattaacaa 13878678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 36493207 - 36493321
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || || ||||| || || |||||||| |||| ||||||||||||  |||| ||||    
T  36493207 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttaggagaactaaccggccaccaaacgataaaaaccgactattgaaaccagaca 36493306  T
Q  127 gtctagatttaatac 141  Q
     ||| ||||||||||    
T  36493307 atctcgatttaatac 36493321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 8300627 - 8300752
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| || || ||||||||||| | |||||| |     
T  8300627 ctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccaccgaaggaaagaaaccgactttgccaaccagc 8300726  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
    || ||||||||||||||| |||||||    
T  8300727 caatctagatttaatacggttcacaa 8300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 9923407 - 9923558
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||| ||||||||| | ||  |||| ||| || || ||||||||||| |||||||||||||| || ||    
T  9923407 agattatacctgacggagctttgaaaaaggaaagtgtatagacaggtagagcagtcaagacggacttaagaagaaccaaacgaccaccaaaagaaaggaa 9923506  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
     ||||| | |||||| |||| ||||  |||||| ||||| |||| |||||||    
T  9923507 tcgactttgccaaccagacaatctatttttaatgcgattaacaacaggttcc 9923558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 26774581 - 26774449
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||||||||| || ||||||| ||| || || ||||||||||| || |  |||| ||| |||||| ||||||| |||||    
T  26774581 agattatacatgacggagctttgaagaaggagagagcatagataggtaacgaagtcaggacagacttaatgagaatcaaacgaccaacaaaagacagaaa 26774482  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
     ||||| |||||||| || | ||||||||||||    
T  26774481 acgactcttccaaccagataatctagatttaat 26774449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 17700286 - 17700433
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| |||| ||| ||||||| |||||||||||||||||||| |  |  |||| ||||||||||||||| | ||| ||||||||||| ||  |  |    
T  17700286 agattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaatcgaccaccaaaggaatggta 17700385  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    || ||||| ||||||  ||| |||||| || |||||||| ||||||||    
T  17700386 cctactatgccaaccaaacaatctagactttatacgattaacaatagg 17700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 12135047 - 12135174
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||| ||||||||||||||||||||| ||| |   ||||  || ||||| || || | |||||| || |||||| | | ||||||  |||||||||| ||    
T  12135047 ctttaaagaaggaaagtgcatagacatgcataa--gtcaaaaccgatttaaggaggatcaagcggccgccaaaaaagaaaaaccggttattccaacctga 12135144  T
Q  125 cagtctagatttaatacgattcacaatagg 154  Q
    || |||||||||||||||||||||||||||    
T  12135145 caatctagatttaatacgattcacaatagg 12135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 20825132 - 20825253
Alignment:
Q  33 aaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctag 132  Q
    |||||||||||||||||||| |  |  |||| |||| ||||||| |||| ||||||||||||||| || ||  ||| ||||| |||||| |||| |||||    
T  20825132 aaggaaagtgcatagacaggaagcgcagtcaagacatatttgagcagaatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctag 20825231  T
Q  133 atttaatacgattcacaatagg 154  Q
    | || ||||| || ||||||||    
T  20825232 actttatacgtttaacaatagg 20825253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 29721245 - 29721176
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgag 76  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||||||||||||||| ||||||||| |||||    
T  29721245 agattatacctgacggagctttgaaaaaggaaagagcatagacaggcaaagaggacaggacagacttgag 29721176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 15539872 - 15539938
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaac 82  Q
    |||| ||| |||||||||||||||| ||||| ||||||| |||||||| |||||| || ||||||||    
T  15539872 ctgacggagctttgaagaaggaaagagcataaacaggcagagaggtcaagacagactttagaagaac 15539938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 7925478 - 7925513
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  7925478 actcttatgaaaattaactttcaaacccgacatagc 7925513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 36493468 - 36493511
Alignment:
Q  288 agcatactcttatgaaaattcactttcaaacccgacatagcctc 331  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  36493468 agcatactcttattaaaatttactttcaaaccagacatagcctc 36493511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 21312448 - 21312415
Alignment:
Q  63 aggacagatttgagaagaaccaagcgaccaccaa 96  Q
    ||||||||||| ||||||||||||||||||||||    
T  21312448 aggacagatttcagaagaaccaagcgaccaccaa 21312415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 11393501 - 11393425
Alignment:
Q  178 gattaccaccaataggcatacccaggtacaagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    ||||||| |||||||| | ||| ||||||| ||||||||  || || ||||||||||| ||||| ||||| ||||||    
T  11393501 gattacccccaataggaagaccaaggtacatgaaaggaatcttgcccactttacaactcaacactgaagccgcctca 11393425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 12341391 - 12341451
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    ||||||| |||||||| || |||||||||| ||||| || ||| || ||||||||||||||    
T  12341391 ctttgaaaaaggaaagagcgtagacaggcagagaggacatgacggacttgagaagaaccaa 12341451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 13440864 - 13441192
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||||||||| ||||||||||||| |||||||| |||| ||||||| |||||||||||||||||| |||| |||||    
T  13440864 agattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatatttgagtagaaccaagcgaccaccacaagagagaaa 13440963  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||    
T  13440964 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtac 13441063  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| ||  | || ||||||||||| ||||| || ||||| |||| |||||| |||||| |||||||||||   || |||||||||||||||||||    
T  13441064 aagaaagggacagttccaactttacaactcaacacggatgcagcttcatataaccaggacgacccaatattcaccaccaccagcatactcttatgaaaat 13441163  T
Q  307 tcactttcaaacccgacatagcctcgaac 335  Q
    |||||||||||||||||||||||||||||    
T  13441164 tcactttcaaacccgacatagcctcgaac 13441192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 45993382 - 45993706
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||| || ||    
T  45993382 agattatacctgacggagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaacgaccaccaaaagagaggaa 45993481  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||||||||| || ||||||||||||| ||| ||| |||||| ||| |  ||||||||||||||||| |||||||||| |||     
T  45993482 acgactattccaacctgacagtctagactttatacgattcacaacagggtcccagaaacacaaacgacgaggattaccaccaatcggcatacccaagtat 45993581  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |||||||| || || || ||||||||| ||| |||||| || ||||||  ||||||||| || ||||| || |||| ||| |||  |||||| | |||||    
T  45993582 aagaaaggcacctttcccactttacaatttagcacagacgctgcctcaaataaccaagaagatgcaatgttaaccccaaccagcgaactcttgttaaaat 45993681  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    | ||||||||||| |||| ||||||    
T  45993682 taactttcaaaccagacaaagcctc 45993706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 34232507 - 34232831
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||||| || |  |||||||  || ||||||||||||| |||    
T  34232507 agattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactttaacagaaccagacggccaccaaaagataaaaa 34232606  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||  |||| ||| ||||||||||||| ||||||| | |||| ||| |  |||||||| || ||||||||||  |||| ||||    
T  34232607 acgactattccaaccagacaacctagcttttatacgattcacaaaaggttcccaaaaactcaaacgccgaggatttcccccaataggcaagcccaagtac 34232706  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaa 305  Q
    || || || || ||||| ||||||||| |||| ||||| || ||||||  |||||| || || |  |||||||| || | ||||| ||||||||||||||    
T  34232707 aaaaacggcaccttacccactttacaatttaaaacagacgctgcctcacttaaccacgaagaagagatattcacgccaaccaagc-tactcttatgaaaa 34232805  T
Q  306 ttcactttcaaacccgacatagcctc 331  Q
    ||||| |||||||| ||||| |||||    
T  34232806 ttcaccttcaaaccagacatggcctc 34232831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 254
Target Start/End: Original strand, 43572360 - 43572594
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||| ||||||||||| ||||| ||||||| ||| ||||  || | ||| || || | ||||||||||||||| || |||||||| ||||||||     
T  43572360 tggagctttaaagaaggaaagagcataaacaggcagagaagtcaaaacggctttcaggaggatcaagcgaccaccaaacgagagaaaccggctattccac 43572459  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||||||| ||||||||||||||||||||| | | | ||| | ||||| || ||| || |||||||| |||||||||||||| || ||||| |||||||      
T  43572460 cccgacaatctagatttaatacgattcacgacatgatccca-aaacgaaagtctccgcggattacccccaataggcatacctagatacaaaaaaggaatc 43572558  T
Q  219 ttacctactttacaacttaacacagaagcagcctca 254  Q
    ||||||||||||||||| ||||| || |||||||||    
T  43572559 ttacctactttacaactcaacactgaggcagcctca 43572594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 4937444 - 4937311
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  4937444 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 4937345  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  4937344 caatctagatttaatacgatccaccacaggttcc 4937311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 330
Target Start/End: Original strand, 4078083 - 4078402
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| || ||||||||||||| ||||||||||||| |||||     |||||||| | ||||| ||  || || |||||||||| |||    
T  4078083 agattatacctgatggagctctgaagaaggaaagcgcatagacaggcagagagg-----acagattttaaaagaatcagacggccgccaaaagataaaaa 4078177  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||  || | |||||| |||||||||||||| ||| | |||| |||||   ||| ||| || ||||||||||||||||  |||    
T  4078178 acgactattccaaccagacaacctggctttaatgcgattcacaataggatcccaaaaactcaatcgctgagaattccctccaataggcatacccaaatac 4078277  T
Q  207 aagaaaggaacgttacctactttacaacttaacac-agaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaa 305  Q
    |  ||  | || ||||| ||||| |||||||| ||  || || |  |||| ||||||||| |  || |||||||| | ||| |  |||||||||||||||    
T  4078278 ataaactgtaccttacccactttgcaacttaaaacgggacgccgtgtcatttaaccaagatggggcgatattcacaccaaccaaaatactcttatgaaaa 4078377  T
Q  306 ttcactttcaaacccgacatagcct 330  Q
    ||||| |||| ||| ||||||||||    
T  4078378 ttcaccttcagaccggacatagcct 4078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 18768214 - 18768456
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| | |||| |||||||||| ||||| ||||||||||||| ||| || || |  ||||| || |||| ||| |||||| ||||||| |||||    
T  18768214 agattatacttgttggagctttgaagaaagaaagagcatagacaggcagagatgtaagaattgattttaggagaatcaaacgaccaacaaaagagagaaa 18768313  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
    || |||| ||||||||||||||||||||||||| ||||| || || |||||  | ||  | | ||| || ||||||||||| |||||     | ||||||    
T  18768314 cctactaatccaacccgacagtctagatttaatgcgattaacgatcggttctcaaaactgaagtctccgcggattaccacctatagg-----ctaggtac 18768408  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    || |||||||  ||||| ||||||||||| ||||| || || ||||||    
T  18768409 aaaaaaggaattttacccactttacaactcaacaccgacgctgcctca 18768456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 46626628 - 46626775
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||    
T  46626628 agattatatctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaa 46626727  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||| |||||||||||||  ||||||| |||||| |||| |||||||||    
T  46626728 ccggctattccaacccgtaagtctagctttaattcgatgcacaatagg 46626775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 17721441 - 17721592
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  ||||||||  | || ||||||||||| |||||||||||||| || ||    
T  17721441 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaacttaagaagaaccaaacgaccaccaaaagaaaggaa 17721540  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| |||| ||||  |||||| ||||| |||| |||||||    
T  17721541 ccgactttgccaaccagacaatctatttttaatgcgattaacaacaggttcc 17721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 41340373 - 41340496
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| |||||||||  || ||| ||||| || ||||| || || | ||||||||||||||| || ||||| || ||||| ||||||||    
T  41340373 ctttgaagaaggaaagggcatagacatacagagaagtcagaaccgatttaaggaggatcaagcgaccaccaaaggagagaaatcggctatttcaacccga 41340472  T
Q  125 cagtctagatttaatacgattcac 148  Q
    || |||||||||||| ||||||||    
T  41340473 caatctagatttaatgcgattcac 41340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 33820884 - 33820794
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| ||||||||||||||||  |||||| ||||| ||||||||||||||| |||||||||| ||| |||||  |||||||||||||    
T  33820884 ctgatggagctttgaagaaggaaagaacatagataggcagagaggtcaggacagaattgagaagaatcaaccgacccgcaaaagatagaaa 33820794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 36227476 - 36227338
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| ||||  || | ||| ||||| | |||||| ||||| || || ||||||   |||||    
T  36227476 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaaaactgctttaagaaggatcaagcggccaccgaacgagagaaacttgctatt 36227377  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  36227376 ccaacccgacagtctagacttaatgcgattcacaatagg 36227338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 22819042 - 22818955
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatag 103  Q
    |||||||| || ||||||||||||||||||||||||| | ||||| ||||||||  || |||||||| |  |||||||||||||||||    
T  22819042 ctgatggagctctgaagaaggaaagtgcatagacaggaagagaggacaggacagccttaagaagaactagacgaccaccaaaagatag 22818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 27218436 - 27218337
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||||||||||||| | |  || |||| |||||| || ||||||||||||||||| || ||||||||||| ||||| | ||| |||||||    
T  27218436 ttgaagaaggaaagtgcatagacatgaagcgaagtcaagacagacttaagaagaaccaagcgacccccgaaagatagaaaacgactttgccaccccgaca 27218337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 29968780 - 29968931
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| || || || ||    
T  29968780 agattatacctgacggagctttgaaaaaggaaagagcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccaccgaaggaaaggaa 29968879  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| | || ||||||||||||||| ||||||| |||||||    
T  29968880 ccgactttgccaaccagccaatctagatttaatacggttcacaacaggttcc 29968931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 12378293 - 12378059
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||| | |||||||||| ||||| |||| || ||||||||| |||| ||||||||| ||||| |||||| | || ||||| || | ||||||||||||    
T  12378293 ctgatgaagctttgaagaaagaaagagcattgataggcaaagaagtcaagacagattttagaagtaccaagtgtccgccaaaggagataaaccgactatt 12378194  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    | ||| ||    ||||| || ||| |||||||||||||| ||| | ||||  |  |   |  ||||||| |||||||| |  || | |||||| ||||||    
T  12378193 caaactcgtacttctagcttcaattcgattcacaatagggtcccaaaaactaagacgatgcagattacccccaatagggaagcctaagtacaaaaaagga 12378094  T
Q  216 acgttacctactttacaacttaacacagaagcagc 250  Q
    || ||||| ||||| ||||||||||| ||||||||    
T  12378093 accttacccactttgcaacttaacaccgaagcagc 12378059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 45164861 - 45164748
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | ||||| |||||| || | ||||| ||||||||| ||||| || ||||||||||| | |||||  |||     
T  45164861 ttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaggaaagaaaccgactttgccaactagacg 45164762  T
Q  127 gtctagatttaata 140  Q
    ||||||||||||||    
T  45164761 gtctagatttaata 45164748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 41805073 - 41804985
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||| || ||||||||||| | |||||||| |||||| || |||||||| || || |||||||| |||| ||||||||||||    
T  41805073 ttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaactaaccggccaccaaacgataaaaaccgactatt 41804985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 25018616 - 25018528
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||||||  |||||| ||| |||||||||| |||||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  25018616 ttgaagaaggaaagaacatagataggtaaagaggtcaagacagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 25018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 23887823 - 23887880
Alignment:
Q  51 ggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaacc 108  Q
    |||| ||||||||||||||| |||||||||| ||| || || ||||||||||||||||    
T  23887823 ggcagagaggtcaggacagacttgagaagaatcaatcggcccccaaaagatagaaacc 23887880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 4937176 - 4937141
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4937176 actcttatgaaaattaactttcaaacccgacatagc 4937141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 11276582 - 11276463
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| ||||| || ||    
T  11276582 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttaggagaatcaaacgaccaccgaaagaaaggaa 11276483  T
Q  107 ccgactattccaacccgaca 126  Q
    || ||| | |||||| ||||    
T  11276482 ccaactttgccaaccagaca 11276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 17056335 - 17056430
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||||| ||||||  || ||||||||||||  ||||||||||| | ||||| || |||||| || || |||||||  ||||||||||||||||    
T  17056335 agattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaaccagacgaccaccaaaagata 17056430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 19735324 - 19735375
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaaga 58  Q
    ||||||||| ||||||| |||| ||||||||||| |||||||||||||||||    
T  19735324 agattatacctgatggagctttaaagaaggaaagagcatagacaggcaaaga 19735375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 23898999 - 23899056
Alignment:
Q  51 ggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaacc 108  Q
    |||| ||||||||||||||| |||||||||| ||| |  || ||||||||||||||||    
T  23898999 ggcagagaggtcaggacagacttgagaagaatcaatcagcccccaaaagatagaaacc 23899056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 28173052 - 28172999
Alignment:
Q  272 aatattcaccctaacaagcatactcttatgaaaattcactttcaaacccgacat 325  Q
    ||||| ||||| ||| |||||||| ||||||||||| ||||||||||| |||||    
T  28173052 aatatccaccccaaccagcatacttttatgaaaattgactttcaaaccagacat 28172999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 28740251 - 28740179
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaa 97  Q
    |||||||||||||||| ||||| ||||||| ||| | || ||||||||| || |||   ||||||||||||||    
T  28740251 ctttgaagaaggaaagagcataaacaggcagagaagacatgacagatttaaggagagttaagcgaccaccaaa 28740179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 6175792 - 6175583
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6175792 tttgaagaaggaaagtgcatagacaggcagagatgtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaacccgac 6175693  T
Q  126 agtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttaccta 225  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || || ||||    
T  6175692 agtctagatttaatatgattcacaataggttcctagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaagggacatttccta 6175593  T
Q  226 ctttacaact 235  Q
    ||||||||||    
T  6175592 ctttacaact 6175583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 331
Target Start/End: Complemental strand, 43120996 - 43120684
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| |||||||||||||||  |||||||||| || |||||||||||||||||| | |||||||| |||||| ||||||||||  || |||||||||||    
T  43120996 atggagctttgaagaaggaaaacgcatagacagacagagaggtcaggacagattttaaaagaaccaggcgaccgccaaaagataagaaacgactattcca 43120897  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||| ||||||||| |||||||  ||||||||||||| ||| | |||  |||||  ||||||||||| || |||| ||||||||  |||| ||| |  ||     
T  43120896 accagacagtctaaatttaatctgattcacaataggatcccaaaaaatcaatcgccgaggattacctccgatagacatacccaactacatgaatgacacc 43120797  T
Q  219 ttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaac 318  Q
    || || ||||| || ||||| ||||| || ||||||| |||||| || |  |||||||| || | ||| |   | ||||||||||| ||||| |||||||    
T  43120796 ttgcccactttgcagcttaaaacagatgccgcctcatttaaccacgagggtgcaatattgacaccaaccaaattgctcttatgaaagttcaccttcaaac 43120697  T
Q  319 ccgacatagcctc 331  Q
      |||||||||||    
T  43120696 ttgacatagcctc 43120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 23819371 - 23819695
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| || |  ||||||| |||||||||||||||||  ||    
T  23819371 agattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacagactttaagagaaccatgcgaccaccaaaagataagaa 23819470  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||  |||  |||||| |||||||||||| | ||| | |||| |||||  ||||||||||| || |||| |||| ||| ||||    
T  23819471 acgactattccaaccagacaacctaactttaatccgattcacaataagatcccaaaaactcaatcgccgaggattacctccgatagacatatccaagtac 23819570  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    | ||| |  || || || ||||| || ||||| ||||| || ||||| | |||||| || |  |||||||| || | ||| |   | ||||||||||| |    
T  23819571 atgaatgacaccttgcccactttgcagcttaaaacagatgccgcctcgtttaaccacgagggtgcaatattgacaccaaccaaactgctcttatgaaagt 23819670  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    |||| |||||||| |||||||||||    
T  23819671 tcaccttcaaacctgacatagcctc 23819695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 24926019 - 24925872
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| ||| ||||  || ||||| || || | ||||||||| |||||||| |||||    
T  24926019 agattatacctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtcaaaaccgatttaaggaggatcaagcgaccgccaaaagagagaaa 24925920  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||  ||||||||||||||||||||||||| |||||||||||||||||    
T  24925919 ccgtttattccaacccgacagtctagattttatacgattcacaatagg 24925872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 42674759 - 42674544
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||| || |||||||| |||| |||||| ||||||||||| ||||| | ||||||||||    
T  42674759 tggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgatttgaggagaatcaagcggccaccaaaagagagaaatctactattccaa 42674660  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    | || ||||||||||||||| |||||||| || |||||| | ||  | | ||| || ||||||||||| |||||||  || |||||||| |||||||       
T  42674659 ctcgtcagtctagatttaatgcgattcacgatcggttcccaaaactgaagtctccgcggattaccacctataggcaggcctaggtacaaaaaaggaattc 42674560  T
Q  220 tacctactttacaact 235  Q
    |||| |||||||||||    
T  42674559 tacccactttacaact 42674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 50545049 - 50545373
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||  |||||||| || | ||||||||||||||| || | ||||||||  || || |||||||||| |||    
T  50545049 agattatacctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaaccagacggccgccaaaagataaaaa 50545148  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||  ||||  |||| ||| || |||  ||||||||| ||| | |||| |||||  |||||||| || ||||||| |||||||| ||||    
T  50545149 acgactattccaactagacaacctagcttttatgcgagacacaataggatcccaaaaactcaatcgccgaggatttcctccaatagacatacccaagtac 50545248  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    |  || || |  ||||| ||||| || ||||| ||||| || ||||||| ||||||||| |   | ||||| || | ||| |  || |||||||||||||    
T  50545249 ataaacggcatcttacccactttgcagcttaagacagacgccgcctcatttaaccaagagggaactatatttacaccaaccaaaatgctcttatgaaaat 50545348  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    |||| |||||||| |||||||||||    
T  50545349 tcaccttcaaaccggacatagcctc 50545373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 330
Target Start/End: Complemental strand, 46908004 - 46907681
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| |||||| |||||||||||||||| ||||||| ||||| ||||||||| ||||| || | ||||||||| || || | ||| ||  ||||    
T  46908004 agattatacttgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaacagactttaaaagaaccaaacggccgcaaaaggaatgaaa 46907905  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| |||||||||| |||||||||||||| |||||| ||| | |||| ||||| ||||  |||||| |  || ||||  |||| ||||    
T  46907904 tcgactattccaaccagacagtctagctttaatacgattcaaaataggatcccaaaaactcaatcgtcgacaattacctctgatgggcaagcccaagtac 46907805  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaat 306  Q
    | ||| |  |  | ||| |||  ||| || || ||||| || |||||||  |||||||| |  ||||| || || | ||| | |||||||||||||||||    
T  46907804 atgaacgacatctgacccactcgacatctcaaaacagatgccgcctcattcaaccaagagggggcaatgttaacaccaaccaacatactcttatgaaaat 46907705  T
Q  307 tcactttcaaacccgacatagcct 330  Q
    | || |||||||||||||||||||    
T  46907704 ttaccttcaaacccgacatagcct 46907681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 48569357 - 48569214
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||| |  |  |||||||| ||||||||||||| ||| |||||||||||||| || ||    
T  48569357 agattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaatcaaacgaccaccaaaagaaaggaa 48569258  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||||| |||||| |||| ||||||||| |||||||| ||||    
T  48569257 ccgactatgccaaccagacaatctagattttatacgattaacaa 48569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 2365102 - 2365235
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  2365102 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 2365201  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  2365202 caatctagatttaatacgatccaccacaggttcc 2365235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 21739814 - 21739690
Alignment:
Q  15 actgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactat 114  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| ||| | || | ||| | ||| |||||||||||||| || ||||||||||| ||||    
T  21739814 actgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcggaactgctttcaaaaggaccaagcgaccaccgaacgatagaaaccggctat 21739715  T
Q  115 tccaacccgacagtctagatttaat 139  Q
    ||||||| |||||||||||||||||    
T  21739714 tccaacctgacagtctagatttaat 21739690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 10868450 - 10868593
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| |||| || |||| ||||||||||| ||||| ||||||||||| ||||| || | ||| | ||| ||||||||||||||||| || |||||    
T  10868450 agattatacctgatagagctttaaagaaggaaagagcatatacaggcaaagatgtcagaactgctttcataaggaccaagcgaccaccaaacgagagaaa 10868549  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    ||| |||||||||||||||| |||||||||||| | ||||||||    
T  10868550 ccggctattccaacccgacattctagatttaattctattcacaa 10868593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 14863778 - 14863472
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || |||| |||||| ||||||||    
T  14863778 atggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacgataaaaaccggctattcca 14863679  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacg-caatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaac 217  Q
    ||| |||||||||||||||||   |||||||| ||| ||| | ||||| ||| |  || |||||||| |||||||| | ||| ||||||| ||||||||     
T  14863678 accagacagtctagatttaattttattcacaacagggtccca-aaacgacaaacgacgcggattacccccaataggaagaccaaggtacatgaaaggaat 14863580  T
Q  218 gttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaa 317  Q
     || || ||||||||||| |||||  |||| ||||||   |||||||||   | |||||| || | ||| | || ||| |||| |||||| || ||||||    
T  14863579 cttgcccactttacaactcaacactaaagccgcctcaaccaaccaagactcggaaatattaacaccaactaacaaacttttattaaaattaaccttcaaa 14863480  T
Q  318 cccgacat 325  Q
    ||||||||    
T  14863479 cccgacat 14863472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 30166648 - 30166410
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  30166648 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 30166549  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||||   ||||||| |||||| |||||||||||||| ||| | ||||  |  |  || ||||| || ||||||||||  |||| |||||  ||||||    
T  30166548 ccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggatttcccccaataggcaagcccaagtacataaaagga 30166449  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| |||||||| || ||||| ||||| ||||||    
T  30166448 accttacccactttacagctcaacactgaagctgcctca 30166410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 34332149 - 34331998
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||| || |||||||||||||||||||| | ||  ||||||||||| || || |||| ||| |||||||| ||||| || ||    
T  34332149 agattatacctgacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtagaatcaaacgaccaccgaaagaaaggaa 34332050  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| |||| ||||||||||||||||||||||| |||||||    
T  34332049 ccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcc 34331998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 36709715 - 36709949
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||||||||| ||||| |||| |||||||| ||| || || || |||||||| || | ||| || ||||| ||||| |||||    
T  36709715 agattatacctgttggagctttgaagaaagaaagagcatcgacaggcagagatgttagaactgatttgaggaggatcaaacggccaccgaaagaaagaaa 36709814  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     | |||||||||||||||||||||||||||||| |||||||| || |||||| | ||  | ||||| || ||||||||||| || ||||  || ||||||    
T  36709815 tctactattccaacccgacagtctagatttaatgcgattcacgattggttcccaaaactgaaatctccgcggattaccacctattggcaggcctaggtac 36709914  T
Q  207 aagaaaggaacgttacctactttacaacttaacac 241  Q
    |  |||||||  ||  | ||||||||||| |||||    
T  36709915 ataaaaggaattttttccactttacaactcaacac 36709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 31675737 - 31675869
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| |||||    
T  31675737 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagagagaaa 31675836  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
     ||| | | ||| ||||| | |||||| |||||    
T  31675837 gcgattttgccaccccgataatctagacttaat 31675869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 19876068 - 19876182
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    ||||||||||||||||||||||||||| |  || ||||||||||| || ||||||||||||||||| || ||||||||||| | ||| | ||| ||||||    
T  19876068 tttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaaccaagcgacccccgaaagatagaaaacaactttgccaccccgac 19876167  T
Q  126 agtctagatttaata 140  Q
    | ||||| |||||||    
T  19876168 aatctagttttaata 19876182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 31920668 - 31920554
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||| | | ||| |||||    
T  31920668 ctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttgccaccccga 31920569  T
Q  125 cagtctagatttaat 139  Q
     | |||||| |||||    
T  31920568 taatctagacttaat 31920554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 19919545 - 19919426
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  || |||||  | || || |||| ||| |||||||| ||||||||||||||||| | |||||| ||    
T  19919545 ctttgaagaaggaaagtgcatagacaggtagagcagttaggacgaactttagtagaatcaaacgaccaccgaaagatagaaaccgactttgccaaccaga 19919446  T
Q  125 cagtctagatttaatacgat 144  Q
    || |||||||||||||||||    
T  19919445 caatctagatttaatacgat 19919426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 15481092 - 15480970
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||| ||||| ||||||||| ||| ||| ||||| |||| |||||| || | ||| || ||||||||||| |||||    
T  15481092 agattatacctgatggagctttgaagaaagaaagagcatagacaagcagagatgtcagaacagctttgaggaggatcaaacggccaccaaaagaaagaaa 15480993  T
Q  107 ccgactattccaacccgacagtc 129  Q
     | ||||||||||||||||||||    
T  15480992 tctactattccaacccgacagtc 15480970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 962497 - 962365
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||||||||| |  |  |||||||||||||||||||| | ||| || ||||||||||| || ||    
T  962497 agattatacctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagatttgagaaggatcaaccggccaccaaaagaaaggaa 962398  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
    |||||||| |||||| |||| ||||| ||||||    
T  962397 ccgactatgccaaccagacaatctagctttaat 962365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 40513038 - 40512926
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| || |  ||||||||||| || ||||| ||||| ||||| |||||||| ||||| ||||| | ||| ||| |||    
T  40513038 ttgaagaaggaaagagcatagacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagagagaaaacgactttgccaccccaaca 40512939  T
Q  127 gtctagatttaat 139  Q
    |||||||||||||    
T  40512938 gtctagatttaat 40512926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 19891492 - 19891630
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| ||||||||| |||| ||||| |  |  |||| |||||||||||| |||| || | |||||| ||| || || ||||||||||     
T  19891492 ctgacggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacagatttgagtagaatcaggtgaccactaaaggaaaggaaccgactatg 19891591  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    | |||| |||| |||||||||||||||||| ||||||||    
T  19891592 ctaaccagacaatctagatttaatacgattaacaatagg 19891630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 14309406 - 14309518
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||||||||| ||||||||| | |  |||||||||||||||||||| ||||| || || || || ||||||| ||| ||||| | ||| |||| ||     
T  14309406 tgaagaaggaaagagcatagacaagaagcgaggtcaggacagatttgaggagaactaatcggcccccgaaagataaaaagcgactttgccaccccgccaa 14309505  T
Q  128 tctagatttaata 140  Q
    |||||||||||||    
T  14309506 tctagatttaata 14309518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 12341563 - 12341442
Alignment:
Q  33 aaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctag 132  Q
    |||||||||| ||||||||| |  |  |||| ||||||||||||||| | ||||||||||||||| || ||  ||| ||||| |||||| |||| |||||    
T  12341563 aaggaaagtgtatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctag 12341464  T
Q  133 atttaatacgattcacaatagg 154  Q
    | || ||| |||| ||||||||    
T  12341463 actttatatgattaacaatagg 12341442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 16179764 - 16179889
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| |  |   |||||||||||||||||||   ||| | ||||||||| || || ||| |||||| |||||  ||    
T  16179764 ctttgaaaaaggaaagtgcatagacaggaagtgcaatcaggacagatttgagaagggtcaacctaccaccaaaggaaaggaactgactatgccaactaga 16179863  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
    || |||||||||||| ||||| ||||    
T  16179864 caatctagatttaattcgattaacaa 16179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 53942052 - 53942184
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||| | |  ||||||| |||||| || | ||| ||||| ||||||||| | ||||||||    
T  53942052 agattatacctgacggagctttgaagaaggaaagagcatagacaagaagcgaggtcaagacagactttaaaaggaccaaccgaccaccataggatagaaa 53942151  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
     ||||| | ||| ||||||| ||| || |||||    
T  53942152 gcgactctgccaccccgacaatctggacttaat 53942184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 17271061 - 17270962
Alignment:
Q  22 gaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacc 121  Q
    |||||||||| ||| |||| || |||||| | | ||||||||||||||| || |||| || ||| ||||| |||||||| ||||| ||||| ||||||||    
T  17271061 gaactttgaaaaagaaaagagcgtagacatgaagagaggtcaggacagacttcagaaaaatcaaacgacccccaaaagagagaaaacgacttttccaacc 17270962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 34830220 - 34830331
Alignment:
Q  29 gaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcga-ccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    |||||||||||| ||||||||||| ||   |||||||||||| || ||||| ||||| ||| || ||| |||| ||||| ||||| | ||| |||||||     
T  34830220 gaagaaggaaagagcatagacaggtaacacggtcaggacagacttaagaaggaccaaccgaccccccataagagagaaaacgactttgccaccccgacaa 34830319  T
Q  128 tctagatttaat 139  Q
    ||||||||||||    
T  34830320 tctagatttaat 34830331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 47538073 - 47538135
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacag 69  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||| | ||||||||||||||    
T  47538073 agattatatctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggacag 47538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 16672335 - 16672247
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||||||  |||||||||| | |||||||| |||||| || || ||||| || || ||| |||| |||| ||||||||||||    
T  16672335 ttgaagaaggaaagaacatagacaggtagagaggtcaagacagactttaggagaactaaccggccatcaaacgataaaaaccgactatt 16672247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 2365370 - 2365405
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2365370 actcttatgaaaattaactttcaaacccgacatagc 2365405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 44888710 - 44888805
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||||| ||||||  || ||||||||||||  ||||||||||| | ||||| || |||||| || || |||||||  ||||||||||||||||    
T  44888710 agattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaaccagacgaccaccaaaagata 44888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 6825638 - 6825752
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | | |||||| ||| || || |  ||||| || || |||||||| |||| |||| |||||||  |||| ||||    
T  6825638 ttgaagaaggaaagagcatagacaggtagaaaggtcaagacggactttaagagaactaaccggccaccaaacgataaaaactgactattgaaaccagaca 6825737  T
Q  127 gtctagatttaatac 141  Q
     ||| ||||||||||    
T  6825738 atctcgatttaatac 6825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 8948344 - 8948278
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaac 82  Q
    |||| ||| |||||||||||||||  ||||||||||| | ||||||||||||| | || ||||||||    
T  8948344 ctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggacaaacttaagaagaac 8948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 55367433 - 55367547
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| || |||||| ||||||||| ||||||||| ||||  | |||||| || || || || || ||||| ||||| | ||| || ||    
T  55367433 ctttgaaaaaggaaagagcgtagacaagcaaagaggacaggacagacttgatcaaaaccaatcggcctccgaatgagagaaaacgactctgccacccgga 55367532  T
Q  125 cagtctagatttaat 139  Q
    || ||||||||||||    
T  55367533 caatctagatttaat 55367547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 7164315 - 7164399
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgact 112  Q
    ||||||||||||| ||||| | ||| | |||||||| |||| | || |||||||| || |||||||||||  ||| |||||||||    
T  7164315 tgaagaaggaaagagcataaataggaagagaggtcaagacaaactttagaagaactaaccgaccaccaaacaataaaaaccgact 7164399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 52250439 - 52250327
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| |||| | || || ||||| || |  || ||||| ||||  |||||||||||  | || ||||    
T  52250439 ttgaagaaggaaagcgcatagacaggtagagaggtcaagacaaactttaggagaactaacctgcccccaaacgataagaaccgactattgaacccagaca 52250340  T
Q  127 gtctagatttaat 139  Q
    |||| ||||||||    
T  52250339 gtctcgatttaat 52250327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 262
Target Start/End: Complemental strand, 22094583 - 22094328
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||  | ||||||||||| || ||    
T  22094583 agattatacctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtcaagacagctttgagaagaaccaaatggccaccaaaagagaggaa 22094484  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     ||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||| ||| | |||||||||||||||||| |||||||||| |||     
T  22094483 acgactattccaacccgacagtctagctttaatacgattcacaacaggatcccagaaacacaaacgtcgaggattaccaccaatcggcatacccaagtat 22094384  T
Q  207 aagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaacca 262  Q
    ||||||||||| ||||| ||||||||| ||| ||| || ||| |||||| ||||||    
T  22094383 aagaaaggaaccttacccactttacaatttagcaccgacgcaacctcatttaacca 22094328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 30509357 - 30509110
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||| ||||||||||| ||||||||||||| ||| ||||  || | ||| ||||| | |||||||||||||||||| |||||    
T  30509357 agattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaaggatcaagcgaccaccaaaagagagaaa 30509258  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggta 205  Q
    ||| |||||||| ||||||| ||||||||||||||||||||| | ||| ||| | ||||| || ||| || |||||||| |||||||||| ||| || ||    
T  30509257 ccggctattccaccccgacaatctagatttaatacgattcacgacaggatccca-aaacgaaagtctccgcggattacccccaataggcaaacctagata 30509159  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    ||| |||||||  |||||||||||||| || ||||| ||||||||||||    
T  30509158 caaaaaaggaatcttacctactttacagctcaacaccgaagcagcctca 30509110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 30549700 - 30549453
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| || |||| |||| ||||||||||| ||||||||||||| ||| ||||  || | ||| ||||| | |||||||||||||||||| |||||    
T  30549700 agattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaaggatcaagcgaccaccaaaagagagaaa 30549601  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggta 205  Q
    ||| |||||||| ||||||| ||||||||||||||||||||| | ||| ||| | ||||| || ||| || |||||||| |||||||||| ||| || ||    
T  30549600 ccggctattccaccccgacaatctagatttaatacgattcacgacaggatccca-aaacgaaagtctccgcggattacccccaataggcaaacctagata 30549502  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    ||| |||||||  |||||||||||||| || ||||| ||||||||||||    
T  30549501 caaaaaaggaatcttacctactttacagctcaacaccgaagcagcctca 30549453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 6050055 - 6050370
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| |||||||||||||  |||||||| ||||| || | ||||||||   | |||||||||||||  || ||||||||    
T  6050055 ctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaaccagatggccaccaaaagataagaaacgactatt 6050154  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| || |  || | ||||||||||||||| ||||||||| | |||| ||| |  |||| ||| || || ||||||||||||| |||||| || |      
T  6050155 ccaaccagataaccttgctttaatacgattcacgataggttcccaaaaacacaaacgccgagaatttcccccgataggcatacccaagtacaaaaacgac 6050254  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || || || ||||| || ||||| ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||||||| |||    
T  6050255 accttgcccactttgcaccttaaaacagacgccgcctcacttaaccaagaagaagcgatattcacaccaaccaagc-tactcttatgaaaattcaccttc 6050353  T
Q  315 aaacccgacatagcctc 331  Q
    ||||| ||||| |||||    
T  6050354 aaacctgacatggcctc 6050370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 35122022 - 35121775
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||  || ||||| || |||| ||||||||||||||| || |||||    
T  35122022 agattatacctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtcaaaactgattttaggagaatcaagcgaccaccaaacgagagaaa 35121923  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggta 205  Q
     || ||||| || |||||||||||||||||||||| |||||||| ||| ||| | ||||  || ||| || |||||||| |||||||||| ||  |||||    
T  35121922 tcggctattgcatcccgacagtctagatttaatactattcacaacaggatccca-aaactaaagtctccgcggattacccccaataggcaaacataggta 35121824  T
Q  206 caagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    ||| |||||||| ||||| ||||||||||||||||| || || ||||||    
T  35121823 caaaaaaggaaccttacccactttacaacttaacactgaggccgcctca 35121775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 38358273 - 38358508
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa-gatagaa 105  Q
    ||||||||| || |||| |||||||||| ||||| ||||||||||||| ||| ||||| || ||||| || |||  ||| |||||||||||| || ||||    
T  38358273 agattatacctgttggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagagtcaaacgaccaccaaaaagagagaa 38358372  T
Q  106 accgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggta 205  Q
    ||| |||||||||||||||||||||||||||||| ||||| || || |||||| | ||  | | ||| || ||||||||||| ||||||| ||| |||||    
T  38358373 acctactattccaacccgacagtctagatttaatgcgattaacgatcggttcccaaaactgaagtctccgcggattaccacctataggcagacctaggta 38358472  T
Q  206 caagaaaggaacgttacctactttacaacttaacac 241  Q
    ||| |||||||  ||||| ||||||||||| |||||    
T  38358473 caaaaaaggaattttacccactttacaactcaacac 38358508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 10486227 - 10485989
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||  ||||||||||||| ||| |||| ||||||||| | ||||||||| || || ||||| || |||||||| |||||    
T  10486227 ctgatggagctttgaagaaagaaatggcatagacaggcagagaagtcaagacagattttaaaagaaccaaacgtcctccaaaggaaagaaaccggctatt 10486128  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||  ||||||| ||| || |||| ||||||||| ||| | ||||  |  |  || |||||||| ||||||||||  |||| |||||||||||||    
T  10486127 ccaacccgtaagtctagctttgattcgatgcacaatagggtcccaaaaactaagacgacgcggattacccccaataggcaagcccaagtacaagaaagga 10486028  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| ||||| || || ||||| ||||| ||||||    
T  10486027 accttacccactttgcagctcaacacggaagctgcctca 10485989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 20208054 - 20207854
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||| |||||||| || | ||||||||  || || ||| |||||| |||    
T  20208054 agattatacatgatggagctttgaagaaggaaagcgcatagacaggcagagaggttaggacagactttaaaagaaccagacggccgccataagataaaaa 20207955  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtac 206  Q
     |||||||||||||| ||||  |||| |||||| |||||||||||||||||| | |||  ||| |   ||| ||| || |||||||||||||||| ||||    
T  20207954 acgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaattcaaacgctgagaatttcccccaataggcatacccaagtac 20207855  T
Q  207 a 207  Q
    |    
T  20207854 a 20207854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 31865124 - 31865250
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||||||||  |||||||||| |||||||||||| | |||||| || ||||||||||| || |||||||| ||||| || || |||||||||||||     
T  31865124 tgaagaaggaaaaagcatagacagacaaagaggtcagaatagatttaagtagaaccaagcggcctccaaaagagagaaatcggcttttccaacccgacaa 31865223  T
Q  128 tctagatttaatacgattcacaatagg 154  Q
     ||||||||||||||||||||||||||    
T  31865224 cctagatttaatacgattcacaatagg 31865250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 42514544 - 42514677
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  42514544 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 42514643  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  42514644 caatctagatttaatacgatccaccacaggttcc 42514677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 30731630 - 30731497
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| |||||||| ||    
T  30731630 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttttccaaccaga 30731531  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  30731530 caatctagatttaatacgatccaccacaggttcc 30731497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 25591265 - 25591393
Alignment:
Q  127 gtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttacctac 226  Q
    ||||||||||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||||||  |||| |||||||||| |||| || || ||    
T  25591265 gtctagatttaatacaattcacaatgggatcctagaaacacaatctccgaggattaccaccaataggcaggcccaagtacaagaaatgaacctttcccac 25591364  T
Q  227 tttacaacttaacacagaagcagcctcat 255  Q
    ||||||| | | ||| || ||||||||||    
T  25591365 tttacaattcagcacggatgcagcctcat 25591393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 588325 - 588460
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| ||||||||||  |||| ||||||||||||| |||||||| ||||||||| ||||| |||||||| ||||| ||||| ||||| || ||||||||    
T  588325 atggagctttgaagaaacaaagagcatagacaggcagagaggtcaagacagattttagaagtaccaagcggccaccgaaagagagaaatcggctattcca 588424  T
Q  119 acccgacagtctagatttaatacgattcacaatagg 154  Q
    || ||  ||||||| || ||| ||||||||||||||    
T  588425 actcgtaagtctagcttgaattcgattcacaatagg 588460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 19506804 - 19506936
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||| ||||||| ||||| || | ||| |  ||||| ||||||||||| || |||| |||    
T  19506804 agattatacctgatggagctttaaagaaggaaagagcatagacaagcaaagaagtcagaactgctttcaagagaactaagcgaccaccgaacgataaaaa 19506903  T
Q  107 ccgactattccaacccgacagtctagatttaat 139  Q
    ||| ||||||||||| |||||||||||||||||    
T  19506904 ccggctattccaacctgacagtctagatttaat 19506936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 23239189 - 23239340
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| | | |||||||| ||||| || ||    
T  23239189 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcgaacgaccaccgaaagaaaggaa 23239288  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| |||| |||||||||| |||||||||||| |||||||    
T  23239289 ccgactttgccaaccagacaatctagatttagtacgattcacaacaggttcc 23239340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 28535010 - 28534859
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| |||||||||||||| || ||    
T  28535010 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttaagaagaatcaaacgaccaccaaaagaaaggaa 28534911  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | |||||| |||| ||||  |||||||||||| |||| |||||||    
T  28534910 ccgactttgccaacctgacaatctatttttaatacgattaacaacaggttcc 28534859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 27796290 - 27796433
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| |  |  ||||||||  ||||||||||||  |  |||||||||||||| || ||    
T  27796290 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaattagacgaccaccaaaagaaaggaa 27796389  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||||| |||||| |||| ||||| |||||||||||| ||||    
T  27796390 ccgactatgccaaccagacaatctagttttaatacgattaacaa 27796433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 33385298 - 33385160
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||| ||||||||||||||| | ||||||||||||||| || ||  ||| |||||     
T  33385298 ctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactatg 33385199  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||| |||| |||||| || |||||||| ||||||||    
T  33385198 ccaaccagacaatctagactttatacgattaacaatagg 33385160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 36256601 - 36256716
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | ||||| |||||| || | ||||| ||||||||| |||||||| ||||||||||| | |||||  ||||    
T  36256601 ttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaagaaagaaaccgactttgccaactagaca 36256700  T
Q  127 gtctagatttaatacg 142  Q
    |||||||||| |||||    
T  36256701 gtctagattttatacg 36256716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 19838390 - 19838462
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa 98  Q
    |||||||||||||||  |||||||||||||||| ||||||||||| |||||||||| ||| ||||||| ||||    
T  19838390 tttgaagaaggaaagaacatagacaggcaaagaagtcaggacagacttgagaagaatcaaacgaccacaaaaa 19838462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 380716 - 380839
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||| | |||||||||||||||| ||||||||| ||| |||||||| |||| | || ||||||||||| || || | |||||| ||||| ||||| |     
T  380716 ctgatgaagctttgaagaaggaaagagcatagacatgcagagaggtcaagacaaactttagaagaaccaaccggcccctaaaagagagaaaacgactttg 380815  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||| ||||||| |||||| |||||    
T  380816 ccaccccgacaatctagacttaat 380839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 25856773 - 25856626
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| |  |  || | |||||||||||| |||| ||||||||||||||| || ||  |    
T  25856773 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacagatttgagcagaatcaagcgaccaccaaaggaaaggta 25856674  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    || ||||| |||||| |||| |||||| || ||||| || ||||||||    
T  25856673 cctactatgccaaccagacaatctagactttatacgtttaacaatagg 25856626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 33170463 - 33170596
Alignment:
Q  7 tagattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 105  Q
    |||||||||| ||| ||| ||||||| |||||||| ||||||||||| |  |  ||||||||| |||||||||| | ||| ||  |||||||||| || |    
T  33170463 tagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagtgcagtcaggacaaatttgagaaggatcaaccggtcaccaaaagaaagga 33170562  T
Q  106 accgactattccaacccgacagtctagatttaat 139  Q
    ||||||||| |||||| |||| ||||| ||||||    
T  33170563 accgactatgccaaccagacaatctagctttaat 33170596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 42260088 - 42260193
Alignment:
Q  8 agattata-ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| |||||||| |||||||||||||||| || |||||||| |  ||||||| |||||| |||||||||| ||| || || ||||| ||||||||    
T  42260088 agattatatctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaagacagacttgagaagaatcaaacggcctccaaatgatagaaa 42260187  T
Q  107 ccgact 112  Q
     |||||    
T  42260188 gcgact 42260193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29572186 - 29572138
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29572186 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29572138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29573563 - 29573515
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29573563 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29573515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29574940 - 29574892
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29574940 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29574892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29576317 - 29576269
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29576317 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29577694 - 29577646
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29577694 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29577646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29579071 - 29579023
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29579071 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29579023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 4297623 - 4297509
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| || ||| || || ||||| || || |||||||| |||| ||||||||||||  || | ||||    
T  4297623 ttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttaggagaactaaccggccaccaaacgataaaaaccgactattgaaatcagaca 4297524  T
Q  127 gtctagatttaatac 141  Q
     ||| ||||||||||    
T  4297523 atctcgatttaatac 4297509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 21084707 - 21084795
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || ||||| || || ||||||||||| |||| || || ||||||    
T  21084707 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaggactaaccgaccaccaaatgataaaagccaactatt 21084795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6886010 - 6886101
Alignment:
Q  48 acaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaat 139  Q
    ||||||| ||| ||| | || ||||||||||||| |||||| ||||| ||||| | ||| | ||||||| ||||||| ||||||||||||||    
T  6886010 acaggcagagaagtcggaactgatttgagaagaatcaagcggccaccgaaagagataaatctactattctaacccgaaagtctagatttaat 6886101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 331
Target Start/End: Complemental strand, 7000115 - 6999973
Alignment:
Q  189 ataggcatacccaggtacaagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaaca 287  Q
    ||||||||||| | |||||| || || || || || ||||| |||| ||| ||||| || ||||||  ||||||||| || ||||||||||| || | ||    
T  7000115 ataggcatacctaagtacaaaaacggcaccttgcccactttgcaacctaaaacagacgccgcctcacttaaccaagaggaagcaatattcacacccacca 7000016  T
Q  288 agcatactcttatgaaaattcactttcaaacccgacatagcctc 331  Q
    ||| ||||||||||||| ||||| |||||| | |||||||||||    
T  7000015 agc-tactcttatgaaatttcaccttcaaatcggacatagcctc 6999973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 35983107 - 35983036
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaa 96  Q
    ||||||| |||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| ||||||||||    
T  35983107 ctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacagacttaagaagaatcaaacgaccaccaa 35983036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 17697458 - 17697501
Alignment:
Q  63 aggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||    
T  17697458 aggacagatttcagaagaaccaagcgaccaccaagcgatagaaa 17697501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 42514812 - 42514847
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  42514812 actcttatgaaaattaactttcaaacccgacatagc 42514847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 19853886 - 19853940
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaa 81  Q
    |||||||||||||| ||||||||||||  |||||| |||||| | ||||||||||    
T  19853886 ttgaagaaggaaagagcatagacaggctgagaggttaggacatagttgagaagaa 19853940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 8337 - 8532
Alignment:
Q  7 tagattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 105  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| || | ||||||||  |  || ||| |||||| ||    
T  8337 tagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaaccagacagccgccataagataaaa 8436  T
Q  106 accgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcataccca 201  Q
    | |||||||||||||| ||||  |||| |||||| |||||||||||||||||| | |||| ||| |   ||| ||| || ||||||||||||||||    
T  8437 aacgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaactcaaacgctgagaatttcccccaataggcataccca 8532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 13271 - 13466
Alignment:
Q  7 tagattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 105  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||| |||||| | || | ||||||||  |  || ||| |||||| ||    
T  13271 tagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtaaggacaaactttaaaagaaccagacagccgccataagataaaa 13370  T
Q  106 accgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcataccca 201  Q
    | |||||||||||||| ||||  |||| |||||| |||||||||||||||||| | |||| ||| |   ||| ||| || ||||||||||||||||    
T  13371 aacgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaactcaaacgctgagaatttcccccaataggcataccca 13466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 182933 - 183245
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| || || || |  ||||||| | | || |||||||||| ||| ||||| |||||    
T  182933 atggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaaccgactttaacagaaccaggtggccgccaaaagataaaaaacgactgttcca 183032  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||| ||||  |||| ||||||||||||||| ||||||||| | ||||  || |  |||| ||| || || |||||||| || | ||||||||| || |      
T  183033 accagacaacctagctttaatacgattcacgataggttcccaaaaacttaagcgccgagaatttcctccgataggcatgcctaagtacaagaatggcatc 183132  T
Q  219 ttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttcaaa 317  Q
    || || ||||| ||| | || || || || ||||||  ||||||||| |  || |||||||| || | ||||| ||||||||||||||||||| ||||||    
T  183133 ttgcccactttgcaattcaaaaccgacgccgcctcacttaaccaagaaggggcgatattcacaccaaccaagc-tactcttatgaaaattcaccttcaaa 183231  T
Q  318 cccgacatagcctc 331  Q
    || |||||||||||    
T  183232 ccagacatagcctc 183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 105159 - 105026
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  105159 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 105060  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  105059 caatctagatttaatacgatccaccacaggttcc 105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 104891 - 104856
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  104891 actcttatgaaaattaactttcaaacccgacatagc 104856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 134158 - 133932
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| ||||| || |||||||| || |||||||| |||||||||||||  ||    
T  134158 tgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccgtccaccaaaggaaagaaaccggctattccaacccgtaag 134059  T
Q  128 tctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttacctact 227  Q
    ||||||||| || |||| ||||||||| ||| | ||||  |  |  || |||||||| |||||||| |  |||| ||||||||||||| | ||||| |||    
T  134058 tctagattttattcgatgcacaatagggtcccaaaaactaagccgacgtggattacccccaataggtaagcccaagtacaagaaaggagccttacccact 133959  T
Q  228 ttacaacttaacacagaagcagcctca 254  Q
    || || || ||||| ||||| ||||||    
T  133958 ttgcagctcaacaccgaagctgcctca 133932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 311986 - 311760
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| ||||| || |||||||| || |||||||| |||||||||||||  ||    
T  311986 tgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccgtccaccaaaggaaagaaaccggctattccaacccgtaag 311887  T
Q  128 tctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttacctact 227  Q
    ||||||||| || |||| ||||||||| ||| | ||||  |  |  || |||||||| |||||||| |  |||| ||||||||||||| | ||||| |||    
T  311886 tctagattttattcgatgcacaatagggtcccaaaaactaagccgacgtggattacccccaataggtaagcccaagtacaagaaaggagccttacccact 311787  T
Q  228 ttacaacttaacacagaagcagcctca 254  Q
    || || || ||||| ||||| ||||||    
T  311786 ttgcagctcaacaccgaagctgcctca 311760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 328
Target Start/End: Complemental strand, 3873 - 3561
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| |||||  | || ||||| || |||||||  |||||    
T  3873 ctgatggagctttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaatgtccgccaaaggaaagaaaccagctatt 3774  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||  ||||||||||| || |||| ||||||| | ||| | ||||  |  |  || || ||||| ||||| ||||  |||| |||||||||||||    
T  3773 ccaacccgtaagtctagatttgattcgatgcacaatatggtcccaaaaactaagccgacgcgggttacccccaattggcaagcccaagtacaagaaagga 3674  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || ||||| ||||| ||||| || || ||||| ||||||   | ||||||   ||  ||||| | ||  || | || |||||||||||||||||||||||    
T  3673 accttacccactttgcaactcaaaaccgaagctgcctcacaaagccaagaatccgagatattaatccccaccaacaaactcttatgaaaattcactttca 3574  T
Q  316 aacccgacatagc 328  Q
    | || ||||||||    
T  3573 acccagacatagc 3561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 8419 - 8557
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  8419 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 8518  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||||   ||||||| |||||| ||||||||||||||    
T  8519 ccaacccataagtctagctttaattcgattcacaatagg 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 350 - 493
Alignment:
Q  8 agattatact-gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||| || ||| ||||||| |||||||| ||||||||||| |  |  || ||||| ||||||||||||| || |||||||||||| || || ||    
T  350 agattatacttgacggagctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaatcaggcgaccaccaaaggagaggaa 449  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||||| |||||| || | |||||||||||||||||| ||||    
T  450 ccgactatgccaaccagaaaatctagatttaatacgattaacaa 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 4058 - 4209
Alignment:
Q  8 agattatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| |||||||| || || || ||    
T  4058 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacgaccaccgaaggaaaggaa 4157  T
Q  107 ccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    || ||| | | |||| ||||  |||||||||||||| ||||||| |||||||    
T  4158 ccaactttgcgaaccagacaacctagatttaatacggttcacaacaggttcc 4209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 55491 - 55579
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| || ||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  55491 ttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 55579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 143142 - 143054
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| || ||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  143142 ttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 143054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 28600 - 28688
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || |||||||| || |   ||||||| |||| ||||||||||||    
T  28600 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaagaactaacctgtcaccaaacgataaaaaccgactatt 28688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 6906 - 6971
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaa 81  Q
    |||| ||| ||||||| |||||||| ||||||||||| |  ||||||| |||| ||||||||||||    
T  6906 ctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaagacatatttgagaagaa 6971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 63614 - 63501
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||| ||||| |   |||||| ||||||||| ||||| ||||| |  || ||||||||||| || ||||| | ||| | |||||    
T  63614 ttgaagaaggaaagagcataaacaggaagcaaggtcaagacagattttagaaggaccaaccagcccccaaaagataggaagcgactctgccaccacgaca 63515  T
Q  127 gtctagatttaata 140  Q
     ||||| |||||||    
T  63514 ttctagttttaata 63501  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 67904 - 68012
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||   |||||||| |||| || |||| |||  ||||  |||||  | ||||||| |||||||| ||||| ||||| |||||  ||||    
T  67904 ctttgaagaaggaaaaatcatagacatgcaatgatgtcaagacgtattttcgaagagtctagcgacccccaaaagaaagaaaacgacttttccacgccga 68003  T
Q  125 cagtctaga 133  Q
    |||||||||    
T  68004 cagtctaga 68012  T

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