View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13541_low_1 (Length: 288)

Name: NF13541_low_1
Description: NF13541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13541_low_1
NF13541_low_1
[»] scaffold0031 (1 HSPs)
scaffold0031 (78-272)||(93695-93889)
[»] chr1 (25 HSPs)
chr1 (83-151)||(47651650-47651718)
chr1 (1-43)||(27642665-27642707)
chr1 (1-40)||(52369687-52369726)
chr1 (1-40)||(2277844-2277883)
chr1 (1-40)||(3560322-3560361)
chr1 (1-40)||(4482539-4482578)
chr1 (1-40)||(6213511-6213550)
chr1 (1-40)||(8984447-8984486)
chr1 (1-40)||(9866125-9866164)
chr1 (1-40)||(12048065-12048104)
chr1 (1-40)||(12650325-12650364)
chr1 (1-40)||(13773258-13773297)
chr1 (1-40)||(19011445-19011484)
chr1 (1-40)||(22563476-22563515)
chr1 (1-40)||(24333658-24333697)
chr1 (1-40)||(28564286-28564325)
chr1 (1-40)||(29188726-29188765)
chr1 (1-40)||(39346920-39346959)
chr1 (1-40)||(40520929-40520968)
chr1 (5-40)||(43021564-43021599)
chr1 (1-40)||(43884884-43884923)
chr1 (1-49)||(7961793-7961841)
chr1 (4-40)||(11641334-11641370)
chr1 (4-40)||(29527206-29527242)
chr1 (3-39)||(47088903-47088939)
[»] chr7 (28 HSPs)
chr7 (1-40)||(16861310-16861349)
chr7 (1-40)||(3529870-3529909)
chr7 (1-40)||(7401328-7401367)
chr7 (1-40)||(11453623-11453662)
chr7 (1-40)||(29281283-29281322)
chr7 (1-40)||(32047179-32047218)
chr7 (1-40)||(48288350-48288389)
chr7 (1-40)||(49089589-49089628)
chr7 (4-40)||(43324654-43324690)
chr7 (1-40)||(4960874-4960913)
chr7 (1-40)||(7836878-7836917)
chr7 (1-40)||(15238979-15239018)
chr7 (1-40)||(15694639-15694678)
chr7 (1-40)||(15701619-15701658)
chr7 (1-40)||(21762833-21762872)
chr7 (1-40)||(24061270-24061309)
chr7 (1-40)||(31026309-31026348)
chr7 (1-40)||(32619440-32619479)
chr7 (1-40)||(32826514-32826553)
chr7 (1-40)||(46495179-46495218)
chr7 (1-40)||(46534689-46534728)
chr7 (1-40)||(47255031-47255070)
chr7 (1-40)||(48719889-48719928)
chr7 (1-43)||(28424269-28424311)
chr7 (1-43)||(28735818-28735860)
chr7 (1-39)||(31077845-31077883)
chr7 (1-34)||(36174480-36174513)
chr7 (83-131)||(16180028-16180076)
[»] chr5 (40 HSPs)
chr5 (1-40)||(10241386-10241425)
chr5 (1-40)||(8478834-8478873)
chr5 (1-40)||(15241486-15241525)
chr5 (1-40)||(16280336-16280375)
chr5 (1-40)||(16386682-16386721)
chr5 (1-40)||(16891436-16891475)
chr5 (1-40)||(19273154-19273193)
chr5 (1-40)||(41319392-41319431)
chr5 (1-40)||(43580968-43581007)
chr5 (1-50)||(2848303-2848352)
chr5 (1-40)||(546892-546931)
chr5 (1-40)||(4153637-4153676)
chr5 (1-40)||(6119955-6119994)
chr5 (1-40)||(6414157-6414196)
chr5 (1-40)||(9835123-9835162)
chr5 (1-40)||(10404217-10404256)
chr5 (1-40)||(11897338-11897377)
chr5 (1-40)||(16789160-16789199)
chr5 (1-40)||(17545113-17545152)
chr5 (1-40)||(18756076-18756115)
chr5 (1-40)||(20707728-20707767)
chr5 (1-40)||(21749319-21749358)
chr5 (1-40)||(22732307-22732346)
chr5 (1-40)||(25648025-25648064)
chr5 (1-40)||(29691447-29691486)
chr5 (1-40)||(35515602-35515641)
chr5 (1-40)||(39886153-39886192)
chr5 (1-40)||(39919042-39919081)
chr5 (1-40)||(42525490-42525529)
chr5 (1-43)||(32380785-32380827)
chr5 (1-39)||(36735962-36736000)
chr5 (1-34)||(13958472-13958505)
chr5 (1-34)||(18026775-18026808)
chr5 (1-50)||(25400298-25400347)
chr5 (1-34)||(27798711-27798744)
chr5 (4-40)||(6734680-6734716)
chr5 (4-40)||(9125754-9125790)
chr5 (1-33)||(11786008-11786040)
chr5 (4-40)||(36124492-36124528)
chr5 (4-40)||(39799971-39800007)
[»] chr3 (33 HSPs)
chr3 (1-40)||(48887342-48887381)
chr3 (1-40)||(3894634-3894673)
chr3 (1-40)||(11820094-11820133)
chr3 (1-40)||(15492181-15492220)
chr3 (1-40)||(17729081-17729120)
chr3 (1-40)||(19030310-19030349)
chr3 (1-40)||(38819265-38819304)
chr3 (3-40)||(52670094-52670131)
chr3 (1-40)||(9220194-9220233)
chr3 (1-40)||(11206080-11206119)
chr3 (1-40)||(21324686-21324725)
chr3 (1-40)||(23164094-23164133)
chr3 (1-40)||(25279000-25279039)
chr3 (1-40)||(40963652-40963691)
chr3 (1-40)||(44685110-44685149)
chr3 (1-40)||(44764809-44764848)
chr3 (1-40)||(45512936-45512975)
chr3 (1-40)||(45701434-45701473)
chr3 (1-40)||(50675683-50675722)
chr3 (1-40)||(53906469-53906508)
chr3 (1-40)||(54626432-54626471)
chr3 (1-40)||(55007964-55008003)
chr3 (1-39)||(52410183-52410221)
chr3 (1-34)||(24430239-24430272)
chr3 (4-45)||(25938866-25938907)
chr3 (1-50)||(26942843-26942892)
chr3 (1-34)||(44827206-44827239)
chr3 (4-49)||(48739676-48739721)
chr3 (1-49)||(3748534-3748582)
chr3 (4-40)||(23653158-23653194)
chr3 (12-40)||(36590492-36590520)
chr3 (4-40)||(40739152-40739188)
chr3 (1-33)||(51467277-51467309)
[»] scaffold0009 (1 HSPs)
scaffold0009 (83-131)||(169004-169052)
[»] chr8 (38 HSPs)
chr8 (1-40)||(6942472-6942511)
chr8 (1-40)||(13647398-13647437)
chr8 (1-40)||(13747823-13747862)
chr8 (1-40)||(43283907-43283946)
chr8 (1-40)||(44673589-44673628)
chr8 (1-43)||(43656126-43656168)
chr8 (4-40)||(20540048-20540084)
chr8 (4-40)||(34873179-34873215)
chr8 (1-49)||(43403382-43403430)
chr8 (1-40)||(1337056-1337095)
chr8 (1-40)||(2294031-2294070)
chr8 (1-40)||(7813495-7813534)
chr8 (1-40)||(7816493-7816532)
chr8 (1-40)||(8969186-8969225)
chr8 (1-36)||(11066445-11066480)
chr8 (1-40)||(11491887-11491926)
chr8 (1-40)||(16432069-16432108)
chr8 (1-40)||(16449215-16449254)
chr8 (1-40)||(17027822-17027861)
chr8 (1-40)||(17072504-17072543)
chr8 (1-40)||(17558258-17558297)
chr8 (1-40)||(17575728-17575767)
chr8 (1-40)||(21133097-21133136)
chr8 (1-40)||(22274553-22274592)
chr8 (1-40)||(24458406-24458445)
chr8 (1-40)||(24571841-24571880)
chr8 (1-40)||(28536193-28536232)
chr8 (1-40)||(29170855-29170894)
chr8 (1-40)||(29514716-29514755)
chr8 (1-40)||(29733946-29733985)
chr8 (1-40)||(31450898-31450937)
chr8 (1-40)||(33838414-33838453)
chr8 (1-40)||(34266102-34266141)
chr8 (1-40)||(38344139-38344178)
chr8 (4-49)||(13748952-13748996)
chr8 (4-37)||(36359059-36359092)
chr8 (4-36)||(10083255-10083287)
chr8 (4-40)||(31712641-31712677)
[»] chr6 (26 HSPs)
chr6 (1-40)||(7545419-7545458)
chr6 (1-40)||(18071623-18071662)
chr6 (1-37)||(22997426-22997462)
chr6 (1-37)||(23790939-23790975)
chr6 (1-45)||(26347494-26347538)
chr6 (4-40)||(31956120-31956156)
chr6 (1-40)||(743653-743692)
chr6 (1-40)||(3012664-3012703)
chr6 (1-40)||(3640604-3640643)
chr6 (1-40)||(7581134-7581173)
chr6 (1-40)||(9704506-9704545)
chr6 (1-40)||(10517289-10517328)
chr6 (1-40)||(12284211-12284250)
chr6 (1-40)||(20584163-20584202)
chr6 (1-40)||(22574960-22574999)
chr6 (1-40)||(27218974-27219013)
chr6 (1-40)||(31802143-31802182)
chr6 (1-40)||(31803536-31803575)
chr6 (1-40)||(32611495-32611534)
chr6 (1-40)||(33191479-33191518)
chr6 (1-40)||(33573907-33573946)
chr6 (1-43)||(3794111-3794153)
chr6 (10-40)||(7072177-7072207)
chr6 (1-46)||(7328582-7328627)
chr6 (4-40)||(5008930-5008966)
chr6 (1-37)||(7425456-7425492)
[»] chr4 (41 HSPs)
chr4 (1-40)||(10417162-10417201)
chr4 (1-40)||(13264215-13264254)
chr4 (1-40)||(39696279-39696318)
chr4 (4-40)||(47230821-47230857)
chr4 (1-40)||(5304951-5304990)
chr4 (1-40)||(10402531-10402570)
chr4 (1-40)||(12504584-12504623)
chr4 (1-40)||(12581969-12582008)
chr4 (1-40)||(15064143-15064182)
chr4 (1-40)||(15208612-15208651)
chr4 (1-40)||(16342037-16342076)
chr4 (1-40)||(21935567-21935606)
chr4 (1-40)||(22788615-22788654)
chr4 (1-40)||(25175071-25175110)
chr4 (1-40)||(26919409-26919448)
chr4 (1-40)||(29505676-29505715)
chr4 (1-40)||(30217689-30217728)
chr4 (1-40)||(31852554-31852593)
chr4 (1-40)||(33530883-33530922)
chr4 (1-40)||(37251203-37251242)
chr4 (1-40)||(37719090-37719129)
chr4 (1-40)||(37868508-37868547)
chr4 (1-40)||(37935951-37935990)
chr4 (1-40)||(40051712-40051751)
chr4 (1-40)||(41854223-41854262)
chr4 (1-40)||(42395317-42395356)
chr4 (1-40)||(46998309-46998348)
chr4 (1-40)||(47934013-47934052)
chr4 (1-40)||(48569117-48569156)
chr4 (1-40)||(49757225-49757264)
chr4 (1-40)||(52731380-52731419)
chr4 (1-40)||(55021644-55021683)
chr4 (1-40)||(55536469-55536508)
chr4 (1-40)||(56087895-56087934)
chr4 (3-40)||(23924814-23924851)
chr4 (1-50)||(42218840-42218889)
chr4 (4-40)||(4513381-4513417)
chr4 (1-45)||(12625918-12625962)
chr4 (4-40)||(21266449-21266485)
chr4 (4-40)||(28815704-28815740)
chr4 (4-40)||(31777897-31777933)
[»] chr2 (23 HSPs)
chr2 (1-40)||(3286998-3287037)
chr2 (1-40)||(3439038-3439077)
chr2 (1-40)||(22653585-22653624)
chr2 (1-40)||(28153083-28153122)
chr2 (1-40)||(28194722-28194761)
chr2 (1-40)||(37063602-37063641)
chr2 (1-40)||(40931217-40931256)
chr2 (1-34)||(37486880-37486913)
chr2 (1-40)||(1844907-1844946)
chr2 (1-40)||(8742765-8742804)
chr2 (1-40)||(13975216-13975255)
chr2 (1-40)||(18278358-18278397)
chr2 (1-40)||(29772219-29772258)
chr2 (1-40)||(29942068-29942107)
chr2 (1-40)||(43896003-43896042)
chr2 (1-40)||(44822514-44822553)
chr2 (4-40)||(4659500-4659536)
chr2 (4-40)||(4878301-4878337)
chr2 (1-37)||(16754773-16754809)
chr2 (4-40)||(18862345-18862381)
chr2 (4-40)||(28441425-28441461)
chr2 (4-40)||(28646854-28646890)
chr2 (1-37)||(44186533-44186569)
[»] scaffold1088 (1 HSPs)
scaffold1088 (1-40)||(2902-2941)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-40)||(3756-3795)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-40)||(15854-15893)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-40)||(50785-50824)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-40)||(59873-59912)


Alignment Details
Target: scaffold0031 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 78 - 272
Target Start/End: Complemental strand, 93889 - 93695
Alignment:
Q  78 aatgcaattataattttaacgaaaatttggcggtattgtttagcgctaaaataactttggttgagcactttctcatgtctacccattatcttctcttact 177  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  93889 aatgaaattataactttaacgaaaatttggcggtattgtttagcgctaaaataactttggttgagcactttctcatgtctacccattatcttctcttact 93790  T
Q  178 ccaaacatatacccattatggtttcttgagtaaaagtaagaaaccctaaacaatggaggtaacaagagatacaaagcaacgctaaggctctgttt 272  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  93789 ccaaacataaacccattatggtttcttgagtaaaagtaagaaaccctacacaatggaggtaacgagagatacaaagcaacgctaaggctttgttt 93695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 47651718 - 47651650
Alignment:
Q  83 aattataattttaacgaaaatttggcggtattgtttagcgctaaaataactttggttgagcactttctc 151  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47651718 aattacaattttaatgaaaatttggcggtattgtttagcgctaaaataattttggttgagcactttctc 47651650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27642707 - 27642665
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaa 43  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  27642707 aattgtgtgagctctagccactagactacttgacaaaaaagaa 27642665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52369687 - 52369726
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  52369687 aattgtgtgagctctagccactagactacttgacaaaaaa 52369726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2277844 - 2277883
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  2277844 aattgtgtgagctctagccactaggctacttgacaaaaaa 2277883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3560361 - 3560322
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  3560361 aattgtgtgagctctagccactagactacttgaccaaaaa 3560322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4482578 - 4482539
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  4482578 aattgtgtgagctctagccactaggctacttgacaaaaaa 4482539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6213511 - 6213550
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  6213511 aattgtgtgagttctagccactagactacttgacaaaaaa 6213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8984486 - 8984447
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  8984486 aattgtgtgagctctagccactaggctacttgacaaaaaa 8984447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9866164 - 9866125
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  9866164 aattgtgtgagctctagccactagactactagacaaaaaa 9866125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12048104 - 12048065
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  12048104 aattgtgtgagctctagccactaggctacttgacaaaaaa 12048065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12650364 - 12650325
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  12650364 aattgtgtgagctctagccactaggctacttgacaaaaaa 12650325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13773258 - 13773297
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  13773258 aattgtgtgagctctagccactaggctacttgacaaaaaa 13773297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19011445 - 19011484
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  19011445 aattgtgtgagctctagccactaggctacttgacaaaaaa 19011484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22563476 - 22563515
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  22563476 aattgtgtgagctctagccactaggctacttgacaaaaaa 22563515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24333658 - 24333697
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  24333658 aattgtgtgagctctagccattaaactatttgacaaaaaa 24333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28564325 - 28564286
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  28564325 aattgtgtgagctctagccactaggctacttgacaaaaaa 28564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29188726 - 29188765
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  29188726 aattgtgtgagctctagccactagactacttgaccaaaaa 29188765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39346959 - 39346920
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  39346959 aattgtgtgagttctagccactaggctatttgacaaaaaa 39346920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40520929 - 40520968
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  40520929 aattgtgtgagctctagccactaggctacttgacaaaaaa 40520968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 43021599 - 43021564
Alignment:
Q  5 gtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||| ||||||||||||||||||||||||||    
T  43021599 gtgtgagctgtagccactagactatttgacaaaaaa 43021564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 43884884 - 43884923
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  43884884 aattgtgtgagttctagccactagactacttgacaaaaaa 43884923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7961793 - 7961841
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataa 49  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||| ||||    
T  7961793 aattgtgtgagctctaaccactaggctatttgaccaaaaaaaactataa 7961841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 11641370 - 11641334
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  11641370 tgtgtgagctctagccaccagattatttgacaaaaaa 11641334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 29527206 - 29527242
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29527206 tgtgtgagctctagccactaggctattcgacaaaaaa 29527242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 47088903 - 47088939
Alignment:
Q  3 ttgtgtgagctctagccactagactatttgacaaaaa 39  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  47088903 ttgtgtgagctctagccactaaactacttgacaaaaa 47088939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16861349 - 16861310
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16861349 aattgtgtgagctctagccactagactatttgacaaaaaa 16861310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3529870 - 3529909
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3529870 aattgtgtgagctctagccactagactacttgacaaaaaa 3529909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7401367 - 7401328
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  7401367 aattgtgtgagctctagccactagactacttgacaaaaaa 7401328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11453662 - 11453623
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11453662 aattgtgtgagctctagccactaggctatttgacaaaaaa 11453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29281322 - 29281283
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  29281322 aattgtgtgagctctagccactagactacttgacaaaaaa 29281283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32047179 - 32047218
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32047179 aattgtgtgagctctagccactaggctatttgacaaaaaa 32047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48288389 - 48288350
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  48288389 aattgtgtgagctctagccactagactacttgacaaaaaa 48288350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 49089589 - 49089628
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  49089589 aattgtgtgagctctagccactagactacttgacaaaaaa 49089628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 43324654 - 43324690
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||| |||||||||||    
T  43324654 tgtgtgagctctagccactagactacttgacaaaaaa 43324690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4960874 - 4960913
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  4960874 aattgtgtgagctctagccactaggctacttgacaaaaaa 4960913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7836917 - 7836878
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  7836917 aattgtgtgagctctagccactaggctattggacaaaaaa 7836878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15238979 - 15239018
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  15238979 aattgtgtgagctctagccactaggctacttgacaaaaaa 15239018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15694639 - 15694678
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  15694639 aattgtgtggactctagccactagactatttgacaaaaaa 15694678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15701619 - 15701658
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  15701619 aattgtgtggactctagccactagactatttgacaaaaaa 15701658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21762872 - 21762833
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  21762872 aattgtgtgagctctagccactaggctacttgacaaaaaa 21762833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24061309 - 24061270
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  24061309 aattgtgtgagctctagccactagactacttgaccaaaaa 24061270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 31026309 - 31026348
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  31026309 aattgtgtgagctctagccactaggctacttgacaaaaaa 31026348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32619440 - 32619479
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  32619440 aattgtgtgagctctagccactaggctacttgacaaaaaa 32619479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32826553 - 32826514
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  32826553 aattgtgtgagctctagccattaggctatttgacaaaaaa 32826514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 46495179 - 46495218
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  46495179 aattgtgtgagctctagccactaaattatttgacaaaaaa 46495218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46534728 - 46534689
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  46534728 aattgtgtgagctctagccattagactacttgacaaaaaa 46534689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 47255070 - 47255031
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  47255070 aattgtgtgagctctagccactaggctacttgacaaaaaa 47255031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 48719889 - 48719928
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  48719889 aattgtgtgagctctagccactaggctacttgacaaaaaa 48719928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28424311 - 28424269
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaa 43  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||    
T  28424311 aattgtgtgagctctaaccactagactacttgacaaaacagaa 28424269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28735818 - 28735860
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaa 43  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  28735818 aattgtgtgatctctagccactaggctacttgacaaaaaagaa 28735860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31077883 - 31077845
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaa 39  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  31077883 aattgtgtgagctctagccactagactacttgaccaaaa 31077845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36174480 - 36174513
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    |||||||||||||||||||||||||||| |||||    
T  36174480 aattgtgtgagctctagccactagactacttgac 36174513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 16180076 - 16180028
Alignment:
Q  83 aattataattttaacgaaaatttggcggtattgtttagcgctaaaataa 131  Q
    ||||||||||||| | |||| ||| ||| ||||||||||||||||||||    
T  16180076 aattataattttaccaaaaaattgacggcattgtttagcgctaaaataa 16180028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10241386 - 10241425
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10241386 aattgtgtgagctctagccactagactatttgacaaaaaa 10241425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8478873 - 8478834
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  8478873 aattgtgtgagctctagccactagactacttgacaaaaaa 8478834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15241486 - 15241525
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  15241486 aattgtgtgagctctagccactagactacttgacaaaaaa 15241525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16280336 - 16280375
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16280336 aattgtgtgagctctagccactaggctatttgacaaaaaa 16280375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16386721 - 16386682
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  16386721 aattgtgtgagctctagccactagactacttgacaaaaaa 16386682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16891436 - 16891475
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  16891436 aattgtgtgagctctagccactagactacttgacaaaaaa 16891475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19273193 - 19273154
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19273193 aattgtgtgagctctagccactaggctatttgacaaaaaa 19273154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 41319431 - 41319392
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  41319431 aattgtgtgagctctagccactagactacttgacaaaaaa 41319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 43580968 - 43581007
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  43580968 aattgtgtgagctctagccactagactacttgacaaaaaa 43581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2848303 - 2848352
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataat 50  Q
    |||||||||||||||||||||||| ||| ||||| |||||||| ||||||    
T  2848303 aattgtgtgagctctagccactaggctacttgaccaaaaagaataataat 2848352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 546892 - 546931
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  546892 aattgtgtgagctctaaccactaggctatttgacaaaaaa 546931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4153637 - 4153676
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  4153637 aattgtgtgagctctagccactagactacttaacaaaaaa 4153676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6119955 - 6119994
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  6119955 aattgtgtgagctctagccaccatactatttgacaaaaaa 6119994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6414157 - 6414196
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  6414157 aattgtgtgagctctagccactagtctatttgacgaaaaa 6414196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9835123 - 9835162
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  9835123 aattgtgtgagctctagccactaggctacttgacaaaaaa 9835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10404217 - 10404256
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  10404217 aattgtgtgagctctagccactaggctacttgacaaaaaa 10404256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11897338 - 11897377
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  11897338 aattgtgtgagctctagccactagactacttgaccaaaaa 11897377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16789160 - 16789199
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  16789160 aattgtgtgagctctagccactagactacttgaaaaaaaa 16789199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17545152 - 17545113
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  17545152 aattgtgtgagctctagccactaggctacttgacaaaaaa 17545113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18756076 - 18756115
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  18756076 aattgtgtgagttctagccactagactacttgacaaaaaa 18756115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20707767 - 20707728
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  20707767 aattgtgtgagctctagccattagattatttgacaaaaaa 20707728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21749358 - 21749319
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  21749358 aattgtgtgagctctagccactaggctacttgacaaaaaa 21749319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22732346 - 22732307
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  22732346 aattgtgtgagctccagccactagactacttgacaaaaaa 22732307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25648064 - 25648025
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  25648064 aattgtgtgagctctagccactaggctacttgacaaaaaa 25648025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29691447 - 29691486
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  29691447 aattgtgtgagctctagccactaggctacttgacaaaaaa 29691486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 35515602 - 35515641
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  35515602 aattgtgtgagctctagccactaggctacttgacaaaaaa 35515641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39886192 - 39886153
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  39886192 aattgtgtgagctctagccactagactacttgaccaaaaa 39886153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39919081 - 39919042
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  39919081 aattgtgtgagctctagccactaggctacttgacaaaaaa 39919042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 42525490 - 42525529
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  42525490 aattgtgtgagctctagccactagactattttaccaaaaa 42525529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32380785 - 32380827
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaa 43  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||    
T  32380785 aattatgtgaactctagccactagactatttgccaaaaaagaa 32380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36735962 - 36736000
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaa 39  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  36735962 aattgtgtgagctctagccactaggctacttgacaaaaa 36736000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13958472 - 13958505
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  13958472 aattgtgtgagctctagccactagactatctgac 13958505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18026808 - 18026775
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  18026808 aattgtgtgagctctagccactatactatttgac 18026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25400347 - 25400298
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataat 50  Q
    |||||||||||||||||||||||| ||| ||||| ||||| || ||||||    
T  25400347 aattgtgtgagctctagccactaggctacttgaccaaaaaaaaaaataat 25400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27798711 - 27798744
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  27798711 aattgtgtgagctctagccactaggctatttgac 27798744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 6734716 - 6734680
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  6734716 tgtgtgagctccagccactagactaattgacaaaaaa 6734680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 9125754 - 9125790
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  9125754 tgtgtgagctctagccactaggctacttgacaaaaaa 9125790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11786040 - 11786008
Alignment:
Q  1 aattgtgtgagctctagccactagactatttga 33  Q
    |||||||||||||||||||||||||||| ||||    
T  11786040 aattgtgtgagctctagccactagactacttga 11786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 36124492 - 36124528
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  36124492 tgtgtgagctctaaccactagactacttgacaaaaaa 36124528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 39800007 - 39799971
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||  |||||||||||||||||||||||||    
T  39800007 tgtgtgagcttcagccactagactatttgacaaaaaa 39799971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48887381 - 48887342
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48887381 aattgtgtgagctctagccactagactatttgacaaaaaa 48887342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3894634 - 3894673
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3894634 aattgtgtgagctctagccactagactacttgacaaaaaa 3894673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11820094 - 11820133
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  11820094 aattgtgtgagctctagccactagactacttgacaaaaaa 11820133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15492181 - 15492220
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15492181 aattgtgtgagctctagccactaggctatttgacaaaaaa 15492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 17729081 - 17729120
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  17729081 aattgtgtgagctctagccactagactacttgacaaaaaa 17729120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19030310 - 19030349
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  19030310 aattgtgtgagctctagccactagactacttgacaaaaaa 19030349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38819304 - 38819265
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  38819304 aattgtgtgagctctagccactagactacttgacaaaaaa 38819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 52670131 - 52670094
Alignment:
Q  3 ttgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  52670131 ttgtgtgagctctagccactaggctatttgacaaaaaa 52670094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9220233 - 9220194
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  9220233 aattgtgtgagctctagccactaaactatttgaccaaaaa 9220194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11206080 - 11206119
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  11206080 aattgtgtgagctctagccactaggctacttgacaaaaaa 11206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21324725 - 21324686
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  21324725 aattgtgtgagctctagccactaggctacttgacaaaaaa 21324686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23164133 - 23164094
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  23164133 aattgtgtgagctctagccactaaactacttgacaaaaaa 23164094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25279039 - 25279000
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  25279039 aattgtgtgagctctagccactcgattatttgacaaaaaa 25279000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40963691 - 40963652
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  40963691 aattgtgtgagctctagcctctagactacttgacaaaaaa 40963652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 44685149 - 44685110
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  44685149 aattgtgtgagttctagccactagactacttgacaaaaaa 44685110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 44764809 - 44764848
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  44764809 aattgtgtgagctctagccactaggctattagacaaaaaa 44764848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45512975 - 45512936
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  45512975 aattgtgtgagctctaaccactagactacttgacaaaaaa 45512936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45701434 - 45701473
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  45701434 aattgtgtgagctctagccactaggctacttgacaaaaaa 45701473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50675722 - 50675683
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  50675722 aattgtgtgagctctagccactaggctacttgacaaaaaa 50675683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 53906469 - 53906508
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  53906469 aattgtgtgagctctagccactaggctacttgacaaaaaa 53906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 54626432 - 54626471
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  54626432 aattgtgtgagctctagccactagactacttgaaaaaaaa 54626471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 55008003 - 55007964
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  55008003 aattgtgtgagctctagccactaggctaattgacaaaaaa 55007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52410221 - 52410183
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaa 39  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  52410221 aattgtgtgagctctagccactagactacttgaccaaaa 52410183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24430239 - 24430272
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    |||||||||||||||||||||||||||| |||||    
T  24430239 aattgtgtgagctctagccactagactacttgac 24430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 25938907 - 25938866
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaagaaca 45  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||    
T  25938907 tgtgtgagctctagccactaggctacttgacaaaaaaaaaca 25938866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26942843 - 26942892
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataat 50  Q
    |||||||||||||||||||| ||| ||| ||||||||||| || ||||||    
T  26942843 aattgtgtgagctctagccattaggctacttgacaaaaaaaaaaaataat 26942892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44827206 - 44827239
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    |||||||||||||||||| |||||||||||||||    
T  44827206 aattgtgtgagctctagcaactagactatttgac 44827239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 48739721 - 48739676
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaagaacaataa 49  Q
    ||||||||||||||||||||||||| |||| |||||| || |||||    
T  48739721 tgtgtgagctctagccactagactacttgaaaaaaaaaaataataa 48739676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3748582 - 3748534
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataa 49  Q
    |||||||||||||||||||||||| ||| ||||| ||||| || |||||    
T  3748582 aattgtgtgagctctagccactaggctacttgaccaaaaaaaataataa 3748534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 23653194 - 23653158
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||  ||||||||||    
T  23653194 tgtgtgagctctagccactagactacctgacaaaaaa 23653158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 36590492 - 36590520
Alignment:
Q  12 ctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||||    
T  36590492 ctctagccactagactatttgacaaaaaa 36590520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 40739188 - 40739152
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  40739188 tgtgtgagctctagccactagactacttgaccaaaaa 40739152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51467277 - 51467309
Alignment:
Q  1 aattgtgtgagctctagccactagactatttga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  51467277 aattgtgtgagctctagccactaggctatttga 51467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 169004 - 169052
Alignment:
Q  83 aattataattttaacgaaaatttggcggtattgtttagcgctaaaataa 131  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  169004 aattataattttaacaaaaaattggcggcattgtttagcgctaaaataa 169052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6942511 - 6942472
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  6942511 aattgtgtgagctctagccactagactacttgacaaaaaa 6942472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13647437 - 13647398
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  13647437 aattgtgtgagctctagccactagactacttgacaaaaaa 13647398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13747862 - 13747823
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  13747862 aattgtgtgagctctagccactagactacttgacaaaaaa 13747823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43283946 - 43283907
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  43283946 aattgtgtgagctctagccactagactacttgacaaaaaa 43283907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 44673628 - 44673589
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  44673628 aattgtgtgagctctagccactagactacttgacaaaaaa 44673589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43656126 - 43656168
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaa 43  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  43656126 aattgtgtgagctctagccactagactacttgaccaaaaagaa 43656168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 20540084 - 20540048
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20540084 tgtgtgagttctagccactagactatttgacaaaaaa 20540048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34873179 - 34873215
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||||||||||||    
T  34873179 tgtgtgagctccagccactagactatttgacaaaaaa 34873215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43403382 - 43403430
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataa 49  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||    
T  43403382 aattgtgtgagctctagctactagactacttgacaaaaaaaaaaaataa 43403430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1337095 - 1337056
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  1337095 aattgtgtgagctctagccactaggctatttgaccaaaaa 1337056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2294070 - 2294031
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  2294070 aattgtgtgagctctagctactagactacttgacaaaaaa 2294031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7813534 - 7813495
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  7813534 aattgtgtgagctctagccactggactacttgacaaaaaa 7813495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7816493 - 7816532
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  7816493 aattgtgtgagctctagccactaggctacttgacaaaaaa 7816532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8969186 - 8969225
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  8969186 aattgtgtgagctctaaccaccagactatttgacaaaaaa 8969225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11066480 - 11066445
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaa 36  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11066480 aattgtgtgagttctagccactagactatttgacaa 11066445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11491887 - 11491926
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  11491887 aattgtgtgagctctagccactagactacttaacaaaaaa 11491926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16432108 - 16432069
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  16432108 aattgtgtgagctctagccactaggctacttgacaaaaaa 16432069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16449215 - 16449254
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  16449215 aattgtgtgagctctagccactaggctacttgacaaaaaa 16449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17027861 - 17027822
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  17027861 aattgtgtgagctctagccactaggctacttgacaaaaaa 17027822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17072543 - 17072504
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  17072543 aattgtgtgagctctagccactaggctacttgacaaaaaa 17072504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17558297 - 17558258
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  17558297 aattgtgtgagctctagccactaggctacttgacaaaaaa 17558258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 17575728 - 17575767
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  17575728 aattgtgtgagctctagccactaggctacttgacaaaaaa 17575767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21133097 - 21133136
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  21133097 aattgtgtgagctctagccactagtctacttgacaaaaaa 21133136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22274592 - 22274553
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  22274592 aattgtgtgagctctagccactaggctacttgacaaaaaa 22274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24458406 - 24458445
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  24458406 aattgtgtgagctctagccactagactacttgaccaaaaa 24458445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24571880 - 24571841
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  24571880 aattatgtgagctctagccattagactatttgacaaaaaa 24571841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28536232 - 28536193
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  28536232 aattgtgtgagttctagccactagattatttgacaaaaaa 28536193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29170855 - 29170894
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  29170855 aattgtgtgagttctagccactagactacttgacaaaaaa 29170894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29514716 - 29514755
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  29514716 aattgtgtgagctctagccactaggctacttgacaaaaaa 29514755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29733985 - 29733946
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  29733985 aattgtgtgagctctagccactaggctacttgacaaaaaa 29733946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31450937 - 31450898
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  31450937 aattgtgtgagctctagccactaggctacttgacaaaaaa 31450898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33838414 - 33838453
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  33838414 aattgtgtgagctctagccactaggctacttgacaaaaaa 33838453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34266102 - 34266141
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  34266102 aattgtgtgagctctagccactaggctacttgacaaaaaa 34266141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 38344139 - 38344178
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  38344139 aattgtgtgagctctagccactagactacttgaccaaaaa 38344178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 13748996 - 13748952
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaagaacaataa 49  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  13748996 tgtgtgagctctagccactacactacttgacaaaaaa-aacaataa 13748952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 36359059 - 36359092
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaa 37  Q
    ||||||||||||||||||||||||| ||||||||    
T  36359059 tgtgtgagctctagccactagactacttgacaaa 36359092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 10083255 - 10083287
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaa 36  Q
    ||||||||||||||||||||||||| |||||||    
T  10083255 tgtgtgagctctagccactagactaattgacaa 10083287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 31712641 - 31712677
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  31712641 tgtgtgagctctagccactaggctacttgacaaaaaa 31712677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7545419 - 7545458
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  7545419 aattgtgtgagctctagccactagactacttgacaaaaaa 7545458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18071623 - 18071662
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  18071623 aattgtgtgagctctagccattagactatttgacaaaaaa 18071662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22997426 - 22997462
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaa 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  22997426 aattgtgtgagctctagccactagactacttgacaaa 22997462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23790975 - 23790939
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaa 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  23790975 aattgtgtgagctctagccactagactacttgacaaa 23790939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26347494 - 26347538
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaaca 45  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||    
T  26347494 aattgtgtgagctctagccactagactacttgacaataaaaaaca 26347538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 31956156 - 31956120
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31956156 tgtgtgagctctagccactaggctatttgacaaaaaa 31956120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 743653 - 743692
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  743653 aattgtgcgagctctagccactagactacttgacaaaaaa 743692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3012703 - 3012664
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  3012703 aattgtgtgagctctagccattagactacttgacaaaaaa 3012664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3640604 - 3640643
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  3640604 aattgtgtgagctctagccactagactacttgaccaaaaa 3640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7581134 - 7581173
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  7581134 aattgtgtgagctctagccactaggctacttgacaaaaaa 7581173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9704506 - 9704545
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  9704506 aattgtgtgagctctagccactaggctacttgacaaaaaa 9704545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10517289 - 10517328
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  10517289 aattgtgtgagctctagccactaggctacttgacaaaaaa 10517328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12284211 - 12284250
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  12284211 aattgtgtgagctctagccactagactacttgaccaaaaa 12284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20584163 - 20584202
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  20584163 aattgtgtgagctctagccattagactacttgacaaaaaa 20584202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22574960 - 22574999
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  22574960 aattgtgtgagctctaaccactagactacttgacaaaaaa 22574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27218974 - 27219013
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  27218974 aattgtgtgagctctagccactaggctacttgacaaaaaa 27219013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 31802143 - 31802182
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  31802143 aattgtgtgagctctagccactagactacttgaccaaaaa 31802182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31803575 - 31803536
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  31803575 aattgtgtgagctctagccactagactacttgaccaaaaa 31803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32611534 - 32611495
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  32611534 aattgtgtgagctctagccactaggctacttgacaaaaaa 32611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33191518 - 33191479
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  33191518 aattgtgtgagctctagccactaggttatttgacaaaaaa 33191479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33573907 - 33573946
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  33573907 aattgtgtgagctctagccactaggctacttgacaaaaaa 33573946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3794153 - 3794111
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaa 43  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||    
T  3794153 aattgtgtgagctctagccactaggctacttgaccaaaaagaa 3794111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 7072177 - 7072207
Alignment:
Q  10 agctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||||||    
T  7072177 agctctagccactagactatttgacaaaaaa 7072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7328627 - 7328582
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaa 46  Q
    |||||||||||||||||||||||| ||| ||||| ||||| |||||    
T  7328627 aattgtgtgagctctagccactaggctacttgaccaaaaaaaacaa 7328582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 5008930 - 5008966
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  5008930 tgtgtgagctccagccactagactacttgacaaaaaa 5008966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7425456 - 7425492
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  7425456 aattgtgtgagctctagccactaggctacttgacaaa 7425492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 10417201 - 10417162
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  10417201 aattgtgtgagctctagccactagactacttgacaaaaaa 10417162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13264254 - 13264215
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  13264254 aattgtgtgagctctagccactagactacttgacaaaaaa 13264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39696318 - 39696279
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  39696318 aattgtgtgagctctagccactagactacttgacaaaaaa 39696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 47230821 - 47230857
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||| |||||||||||    
T  47230821 tgtgtgagctctagccactagactagttgacaaaaaa 47230857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5304990 - 5304951
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  5304990 aattgtgtgagctctagccactaggctacttgacaaaaaa 5304951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10402531 - 10402570
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  10402531 aattgtgtgagctctagccactaggctacttgacaaaaaa 10402570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12504623 - 12504584
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  12504623 aattgtgtgagctctagccattagactatttgaccaaaaa 12504584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12582008 - 12581969
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  12582008 aattgtgtgagctctagccactaggctacttgacaaaaaa 12581969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15064182 - 15064143
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  15064182 aattgtgtgagctctagccactaaactacttgacaaaaaa 15064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15208612 - 15208651
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  15208612 aattgtgtgagctctagccaatagactacttgacaaaaaa 15208651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16342037 - 16342076
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  16342037 aattgtgtgagctctaaccactagactaattgacaaaaaa 16342076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21935567 - 21935606
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  21935567 aattgtgtgagctttagccactagactacttgacaaaaaa 21935606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22788654 - 22788615
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  22788654 aattgtgtgagcactagccactagactacttgacaaaaaa 22788615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25175110 - 25175071
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  25175110 aattgtgtgagctctaaccactagactatttgaaaaaaaa 25175071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26919448 - 26919409
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  26919448 aattgtgtgagctctagccactaggctacttgacaaaaaa 26919409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29505715 - 29505676
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  29505715 aattgtgtgagctctagccactaaactacttgacaaaaaa 29505676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30217689 - 30217728
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  30217689 aattgtgtgagctttagccactaggctatttgacaaaaaa 30217728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31852593 - 31852554
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  31852593 aattgtgtgagctctagccactaggttatttgacaaaaaa 31852554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33530883 - 33530922
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  33530883 aattgtgtgagctctagccactaggctacttgacaaaaaa 33530922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37251203 - 37251242
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  37251203 aattgtgtgaactctagccactagactacttgacaaaaaa 37251242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37719090 - 37719129
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  37719090 aattgtgtgagctctagccactaggctacttgacaaaaaa 37719129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37868547 - 37868508
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  37868547 aattgtgtgagctctaaccactaaactatttgacaaaaaa 37868508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37935951 - 37935990
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  37935951 aattgtgtgagctctagccactaggctacttgacaaaaaa 37935990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40051712 - 40051751
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  40051712 aattgtgtgagctctagccactaggctacttgacaaaaaa 40051751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41854223 - 41854262
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  41854223 aattgtgtgagctccagccactagactacttgacaaaaaa 41854262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 42395317 - 42395356
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  42395317 aattgtgtgagctttagccactagactacttgacaaaaaa 42395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46998348 - 46998309
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  46998348 aattgtgtgagctctagccattagactacttgacaaaaaa 46998309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 47934052 - 47934013
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  47934052 aattgtgtgagctctagccactagactacttgaccaaaaa 47934013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48569156 - 48569117
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  48569156 aattgtgtgagctctagccactaggctacttgacaaaaaa 48569117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49757264 - 49757225
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  49757264 aattgtgtgagctctagccactaggctacttgacaaaaaa 49757225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 52731419 - 52731380
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  52731419 aattgtgtgagctctagccactaggctacttgacaaaaaa 52731380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 55021644 - 55021683
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  55021644 aattgtgtgagctctagccactagactacttgaccaaaaa 55021683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 55536469 - 55536508
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  55536469 aattgtgtgagctctagccactaggctacttgacaaaaaa 55536508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 56087934 - 56087895
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  56087934 aattgtgtgagttctagccactagactacttgacaaaaaa 56087895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 23924851 - 23924814
Alignment:
Q  3 ttgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  23924851 ttgtgtgagctctagccactaggctattagacaaaaaa 23924814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42218840 - 42218889
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaacaataat 50  Q
    ||||||||||||| |||||||||| ||| ||||||||||| |||| ||||    
T  42218840 aattgtgtgagctttagccactaggctacttgacaaaaaaaaacattaat 42218889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 4513417 - 4513381
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||  |||||||||||||||||||||||    
T  4513417 tgtgtgagctctgaccactagactatttgacaaaaaa 4513381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12625918 - 12625962
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaagaaca 45  Q
    |||||||||| ||||||||||||| ||||| ||||||||| ||||    
T  12625918 aattgtgtgaactctagccactaggctattagacaaaaaaaaaca 12625962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 21266449 - 21266485
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  21266449 tgtgtgagctctagccactagacaatttgactaaaaa 21266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 28815704 - 28815740
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  28815704 tgtgtgagctctaaccactagactacttgacaaaaaa 28815740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 31777897 - 31777933
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||| || |||||||||||    
T  31777897 tgtgtgagctctagccactagattacttgacaaaaaa 31777933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3287037 - 3286998
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3287037 aattgtgtgagctctagccactagactacttgacaaaaaa 3286998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3439038 - 3439077
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  3439038 aattgtgtgagctctagccactagactatttgaccaaaaa 3439077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22653624 - 22653585
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  22653624 aattgtatgagctctagccactagactatttgacaaaaaa 22653585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28153122 - 28153083
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  28153122 aattgtgtgagctctagccactagactacttgacaaaaaa 28153083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 28194722 - 28194761
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28194722 aattgtgtgagctctagccactaggctatttgacaaaaaa 28194761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37063602 - 37063641
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  37063602 aattgtgtgagctctagccactagactacttgacaaaaaa 37063641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40931217 - 40931256
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  40931217 aattgtgtgagctctagccactagattatttgacaaaaaa 40931256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37486913 - 37486880
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgac 34  Q
    ||||||||||||||||||||||||||||||||||    
T  37486913 aattgtgtgagctctagccactagactatttgac 37486880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1844907 - 1844946
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  1844907 aattgtgtgagctctagccactaggctacttgacaaaaaa 1844946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8742804 - 8742765
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  8742804 aattgtgtgaactctagccactagactacttgacaaaaaa 8742765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13975216 - 13975255
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  13975216 aattgtgtgagctctagccactagattacttgacaaaaaa 13975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18278397 - 18278358
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  18278397 aattgtgtgagctctagccactaggctatttgaccaaaaa 18278358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29772258 - 29772219
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  29772258 aattgtgtgagctctagccactaggctacttgacaaaaaa 29772219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29942107 - 29942068
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  29942107 aattgtgtgagctctagcaactagactacttgacaaaaaa 29942068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 43896003 - 43896042
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  43896003 aattgtgtgagctctagccactagactacttgaccaaaaa 43896042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 44822514 - 44822553
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  44822514 aattgtgtgagctctagccactaggctacttgacaaaaaa 44822553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 4659500 - 4659536
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  4659500 tgtgtgagctctagccattagactacttgacaaaaaa 4659536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 4878301 - 4878337
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  4878301 tgtgtgagctctagccactaggctacttgacaaaaaa 4878337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16754773 - 16754809
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaa 37  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  16754773 aattgtgagagctctagccactagactacttgacaaa 16754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 18862345 - 18862381
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  18862345 tgtgtgagctctagccactaggctacttgacaaaaaa 18862381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 28441461 - 28441425
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||| |||||||||| |||||||||||    
T  28441461 tgtgtgagctctagtcactagactacttgacaaaaaa 28441425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 28646890 - 28646854
Alignment:
Q  4 tgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||  ||||||||||    
T  28646890 tgtgtgagctctagccactagactacatgacaaaaaa 28646854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44186533 - 44186569
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaa 37  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  44186533 aattgtgtgagctctagccaccagactacttgacaaa 44186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2941 - 2902
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  2941 aattgtgtgagctctagccactaggctacttgacaaaaaa 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3756 - 3795
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  3756 aattgtgtgagctctagccactaggctacttgacaaaaaa 3795  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15854 - 15893
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  15854 aattgtgtgagctctagccattagactatttgaccaaaaa 15893  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50824 - 50785
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  50824 aattgtgtgagctctaaccactagactaattgacaaaaaa 50785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 59873 - 59912
Alignment:
Q  1 aattgtgtgagctctagccactagactatttgacaaaaaa 40  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  59873 aattgtgtgagctctagccactagactacttgaccaaaaa 59912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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