View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13542_high_3 (Length: 210)
Name: NF13542_high_3
Description: NF13542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13542_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 28071250 - 28071069
Alignment:
| Q |
13 |
aagaatataaaccaatgtcctgctattagattgagaaagcagaagattgccattatcaaaaactctggcaagataacatagtttactcgagatgttgaat |
112 |
Q |
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| T |
28071250 |
aagaatataaaccaatgtcctgctattagattgagaaagcagaagattgccattatcaaaaactctggcaagataacatagtttactcgagatgttgaat |
28071151 |
T |
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| Q |
113 |
catatggattgatataatcaaattccaagtccaccaacaatataagctgcaatcaaaattttcaagggatgttaaaaataat |
194 |
Q |
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| T |
28071150 |
catatggattgatataatcaaattccaagtccaccaacaatataagctgcaatcaaaattttcaagggatgttaaaaataat |
28071069 |
T |
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