View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13544_high_2 (Length: 442)

Name: NF13544_high_2
Description: NF13544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13544_high_2
NF13544_high_2
[»] chr7 (26 HSPs)
chr7 (24-425)||(23107989-23108390)
chr7 (175-425)||(23313254-23313504)
chr7 (175-326)||(22083193-22083344)
chr7 (282-426)||(3862006-3862151)
chr7 (303-425)||(33312996-33313118)
chr7 (303-425)||(36222431-36222552)
chr7 (303-425)||(23759730-23759852)
chr7 (175-256)||(24423205-24423286)
chr7 (328-425)||(6967149-6967246)
chr7 (328-425)||(17863241-17863338)
chr7 (348-425)||(36843104-36843181)
chr7 (303-422)||(11279496-11279614)
chr7 (347-425)||(46846478-46846556)
chr7 (328-425)||(17866500-17866597)
chr7 (212-265)||(26808524-26808577)
chr7 (348-425)||(9765803-9765880)
chr7 (348-425)||(24783410-24783487)
chr7 (360-425)||(294866-294930)
chr7 (186-265)||(1636702-1636781)
chr7 (186-265)||(5189465-5189544)
chr7 (186-265)||(44672797-44672876)
chr7 (212-265)||(20436931-20436985)
chr7 (183-224)||(1960306-1960347)
chr7 (212-265)||(1633482-1633536)
chr7 (212-250)||(5241963-5242001)
chr7 (171-223)||(10345483-10345535)
[»] chr1 (25 HSPs)
chr1 (175-425)||(34066346-34066595)
chr1 (275-425)||(16190272-16190421)
chr1 (184-382)||(8435280-8435478)
chr1 (184-425)||(22456496-22456736)
chr1 (286-425)||(1936628-1936770)
chr1 (332-425)||(32506005-32506098)
chr1 (184-264)||(22447952-22448032)
chr1 (184-264)||(22453186-22453266)
chr1 (184-264)||(49148060-49148140)
chr1 (184-372)||(23990138-23990325)
chr1 (184-263)||(17618865-17618944)
chr1 (328-425)||(10764921-10765018)
chr1 (328-425)||(13493264-13493361)
chr1 (282-425)||(39546244-39546388)
chr1 (328-425)||(13495989-13496086)
chr1 (212-265)||(14159092-14159146)
chr1 (184-263)||(3087507-3087585)
chr1 (109-171)||(38518012-38518075)
chr1 (173-265)||(28138600-28138692)
chr1 (186-265)||(28141863-28141942)
chr1 (186-264)||(25662860-25662938)
chr1 (348-425)||(27282274-27282351)
chr1 (175-232)||(34732100-34732157)
chr1 (182-223)||(2405831-2405872)
chr1 (186-265)||(21911049-21911128)
[»] chr6 (37 HSPs)
chr6 (199-425)||(16883677-16883903)
chr6 (184-425)||(20527164-20527407)
chr6 (186-382)||(11183841-11184037)
chr6 (184-425)||(12980496-12980736)
chr6 (282-425)||(19664766-19664909)
chr6 (184-326)||(28118050-28118192)
chr6 (184-425)||(12983383-12983623)
chr6 (184-264)||(16731608-16731688)
chr6 (282-423)||(15540574-15540714)
chr6 (286-425)||(32427303-32427441)
chr6 (184-326)||(9313545-9313686)
chr6 (184-265)||(15578674-15578755)
chr6 (282-425)||(15535058-15535200)
chr6 (303-425)||(13017311-13017433)
chr6 (303-425)||(30978333-30978455)
chr6 (184-264)||(20189189-20189269)
chr6 (184-264)||(22146722-22146802)
chr6 (58-148)||(2558596-2558687)
chr6 (174-265)||(2773154-2773245)
chr6 (303-425)||(22221726-22221845)
chr6 (303-425)||(22247561-22247680)
chr6 (328-425)||(14790620-14790717)
chr6 (328-425)||(14795648-14795745)
chr6 (328-425)||(32704401-32704498)
chr6 (349-425)||(27649104-27649180)
chr6 (348-425)||(1838475-1838552)
chr6 (175-250)||(6514283-6514356)
chr6 (184-250)||(14281289-14281353)
chr6 (184-250)||(28111576-28111640)
chr6 (182-238)||(13005492-13005546)
chr6 (186-265)||(965025-965104)
chr6 (184-246)||(28107524-28107584)
chr6 (175-248)||(5260099-5260170)
chr6 (228-265)||(12747090-12747127)
chr6 (228-265)||(28894281-28894318)
chr6 (183-223)||(10290296-10290336)
chr6 (183-223)||(17106391-17106431)
[»] chr8 (21 HSPs)
chr8 (184-428)||(41778746-41778988)
chr8 (173-425)||(13097022-13097278)
chr8 (184-418)||(44008304-44008531)
chr8 (282-415)||(12575400-12575533)
chr8 (175-265)||(12820639-12820730)
chr8 (305-425)||(14418467-14418585)
chr8 (184-265)||(587591-587672)
chr8 (184-265)||(626250-626331)
chr8 (304-382)||(41836317-41836394)
chr8 (168-265)||(5952392-5952489)
chr8 (184-265)||(27805367-27805449)
chr8 (183-247)||(45155039-45155101)
chr8 (186-265)||(2847590-2847669)
chr8 (172-245)||(37681279-37681350)
chr8 (186-265)||(33383626-33383705)
chr8 (176-223)||(5538535-5538582)
chr8 (184-250)||(36710408-36710472)
chr8 (374-425)||(41836415-41836466)
chr8 (228-265)||(5828308-5828345)
chr8 (185-261)||(12104222-12104298)
chr8 (86-129)||(33136959-33137003)
[»] chr3 (16 HSPs)
chr3 (186-382)||(50096825-50097020)
chr3 (175-265)||(9155086-9155176)
chr3 (303-425)||(22626434-22626554)
chr3 (304-425)||(39563633-39563754)
chr3 (184-265)||(9158268-9158349)
chr3 (303-425)||(11138692-11138812)
chr3 (348-425)||(13979488-13979565)
chr3 (360-425)||(46731496-46731561)
chr3 (186-265)||(10557812-10557891)
chr3 (184-262)||(18551950-18552028)
chr3 (212-265)||(19194006-19194060)
chr3 (212-265)||(26273320-26273373)
chr3 (183-223)||(10902345-10902385)
chr3 (184-229)||(25260985-25261030)
chr3 (282-377)||(20536436-20536530)
chr3 (175-223)||(41977406-41977454)
[»] chr5 (21 HSPs)
chr5 (184-326)||(17944838-17944980)
chr5 (290-424)||(11988974-11989108)
chr5 (303-425)||(33575091-33575212)
chr5 (304-425)||(26712465-26712586)
chr5 (304-425)||(26982203-26982324)
chr5 (303-422)||(15532322-15532441)
chr5 (303-422)||(15542504-15542623)
chr5 (184-265)||(13423287-13423368)
chr5 (328-425)||(14616575-14616672)
chr5 (305-425)||(34405850-34405968)
chr5 (218-265)||(35432275-35432322)
chr5 (348-425)||(22159746-22159823)
chr5 (212-265)||(43103690-43103744)
chr5 (184-248)||(18239276-18239340)
chr5 (186-265)||(22036124-22036203)
chr5 (212-265)||(36700726-36700780)
chr5 (186-265)||(22039350-22039429)
chr5 (328-425)||(7650088-7650185)
chr5 (184-261)||(36357021-36357099)
chr5 (182-223)||(28787091-28787132)
chr5 (228-265)||(33320725-33320762)
[»] chr2 (18 HSPs)
chr2 (282-425)||(23673445-23673588)
chr2 (329-425)||(13710072-13710169)
chr2 (184-326)||(30719992-30720134)
chr2 (305-425)||(40017981-40018099)
chr2 (328-425)||(36326928-36327025)
chr2 (303-425)||(31626551-31626673)
chr2 (305-425)||(16294900-16295019)
chr2 (303-422)||(31528394-31528513)
chr2 (348-425)||(32575851-32575930)
chr2 (186-265)||(16881559-16881638)
chr2 (186-265)||(17039249-17039328)
chr2 (186-265)||(35077182-35077261)
chr2 (186-265)||(35080440-35080519)
chr2 (184-223)||(25138701-25138740)
chr2 (184-223)||(43724002-43724041)
chr2 (175-241)||(5666805-5666867)
chr2 (179-223)||(15470760-15470804)
chr2 (172-224)||(31427302-31427354)
[»] scaffold0134 (1 HSPs)
scaffold0134 (175-326)||(7454-7605)
[»] chr4 (26 HSPs)
chr4 (282-425)||(26062792-26062937)
chr4 (184-326)||(24605007-24605148)
chr4 (175-264)||(7394621-7394710)
chr4 (282-425)||(2541886-2542028)
chr4 (175-263)||(26703235-26703323)
chr4 (328-425)||(647350-647447)
chr4 (328-425)||(650622-650719)
chr4 (175-249)||(2436966-2437040)
chr4 (304-382)||(11649328-11649405)
chr4 (304-385)||(26060653-26060733)
chr4 (175-249)||(19859265-19859337)
chr4 (186-264)||(54900044-54900122)
chr4 (184-250)||(53094796-53094862)
chr4 (175-223)||(19821024-19821072)
chr4 (374-425)||(11649426-11649477)
chr4 (228-315)||(37176867-37176955)
chr4 (184-223)||(49270993-49271032)
chr4 (379-425)||(26060589-26060635)
chr4 (180-222)||(48415284-48415326)
chr4 (175-238)||(26060801-26060861)
chr4 (86-130)||(41982597-41982642)
chr4 (175-224)||(56195836-56195885)
chr4 (212-255)||(22884195-22884239)
chr4 (212-255)||(22935859-22935903)
chr4 (184-224)||(40795321-40795361)
chr4 (176-224)||(56199163-56199211)
[»] scaffold0440 (1 HSPs)
scaffold0440 (307-425)||(9865-9982)
[»] scaffold0363 (1 HSPs)
scaffold0363 (305-425)||(133-251)
[»] scaffold0264 (1 HSPs)
scaffold0264 (303-425)||(24307-24426)
[»] scaffold0567 (1 HSPs)
scaffold0567 (366-425)||(5995-6054)
[»] scaffold0884 (1 HSPs)
scaffold0884 (186-265)||(4299-4378)
[»] scaffold0996 (1 HSPs)
scaffold0996 (184-250)||(1691-1755)
[»] scaffold0012 (1 HSPs)
scaffold0012 (212-265)||(157363-157417)
[»] scaffold2047 (1 HSPs)
scaffold2047 (212-264)||(570-623)
[»] scaffold1657 (1 HSPs)
scaffold1657 (184-265)||(234-315)
[»] scaffold0352 (1 HSPs)
scaffold0352 (372-425)||(2794-2847)
[»] scaffold0043 (2 HSPs)
scaffold0043 (228-265)||(13873-13910)
scaffold0043 (228-265)||(11530-11567)
[»] scaffold2073 (1 HSPs)
scaffold2073 (183-250)||(635-700)
[»] scaffold0045 (1 HSPs)
scaffold0045 (228-319)||(90344-90436)
[»] scaffold0146 (1 HSPs)
scaffold0146 (212-265)||(36105-36159)


Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-162; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 24 - 425
Target Start/End: Complemental strand, 23108390 - 23107989
Alignment:
Q  24 ggtccatgtttcaaatttacttccttgatgggacatctaatagttagatttttataataattcatgcatgaaacttcatttcaaaatgtaaaaggtaata 123  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23108390 ggtccatgtttcaaatttacttccttgatgggacatctaataattcgatttttataataattcatgcatgaaacttcatttcaaaat-taaaaggtaata 23108292  T
Q  124 aataacaattcttttagtttttaacgtcagtatcaaggatcaatttgattgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| | ||||||||| ||||||||||||||||  ||||||||||||    
T  23108291 aataacaattcttttagtttttaacatcactatcagggatcaatttgattgttgatacacttttagcaactgtactaaaaatatatcaaagtaataaaat 23108192  T
Q  224 ttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaat-aaaggatgtatttaattcaagggtgccctagacaattgagt 322  Q
    ||||||||| |||| |||| ||||||||||||||||||||||         ||||||| |||||||||||||||||||||| || |||||||| ||||||    
T  23108191 ttataagtttgtatttacatggactgtttcaatttctactcgacaaaagccttaaaataaaaggatgtatttaattcaaggatgtcctagacagttgagt 23108092  T
Q  323 tgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcct 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23108091 tgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaaatgtggttaagaccttcgaatcatccgaagctctcct 23107992  T
Q  423 atg 425  Q
    |||    
T  23107991 atg 23107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 175 - 425
Target Start/End: Original strand, 23313254 - 23313504
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnnta 274  Q
    |||||| | ||||||||||||||||||||||||||  || ||||||||||||||||||| |||| ||||||||||||||||||||||||||             
T  23313254 ttgatagacttttagcaagtgtactaaaaatatatcgaaataataaaatttataagttcatatccacagggactgtttcaatttctactcggcataagcg 23313353  T
Q  275 ttaaaataaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaa 374  Q
    ||||||||||||||||||| ||||||||||||||||||  | |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  23313354 ttaaaataaaggatgtattaaattcaagggtgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggttttagaaa 23313453  T
Q  375 attagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||| ||||||||||||| ||||| ||||||| |||||||||    
T  23313454 attagagagaagtatggttaagacctttgaatcctccgaagttctcctatg 23313504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 175 - 326
Target Start/End: Original strand, 22083193 - 22083344
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnnta 274  Q
    |||||| | |||||||||||||||||||| |||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||        |    
T  22083193 ttgatagacttttagcaagtgtactaaaattatatcgaagcaataaaatttataagttcgtatccacagggactgtttcaatttctactcggcaaaagca 22083292  T
Q  275 ttaaaataaaggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    |||||||||||||| |||| ||||||| |||||||||| || ||||||||||    
T  22083293 ttaaaataaaggatatattaaattcaatggtgccctaggcagttgagttgat 22083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 426
Target Start/End: Original strand, 3862006 - 3862151
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgttt-gtaacataaacgaattaaaaacaataaaagattggttttagaaaattaga 380  Q
    |||||||||||| ||||||| | |||||||| || || | ||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  3862006 aaaggatgtattaaattcaatgatgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttataaaattaga 3862105  T
Q  381 gagaagtgtggttaagaccttcgaatcatccgaagctctcctatgc 426  Q
    ||||||| || |||||||||||||||| | ||||| ||||||||||    
T  3862106 gagaagtatgattaagaccttcgaatccttcgaagttctcctatgc 3862151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 425
Target Start/End: Complemental strand, 33313118 - 33312996
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacg-aattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||||||  |||||||   |||||||| ||||    
T  33313118 ggtgccctaggcagttgagttgat-tttgtaacataaacggaattaaaaataataaaggattggttttagaaaatctgagagaaaaatggttaagtcctt 33313020  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| || ||||||||||||||    
T  33313019 cgaatcctctgaagctctcctatg 33312996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 36222431 - 36222552
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattgg-ttttagaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| ||| ||||||||||  |||||||||||  ||||||||| |||||||| ||| ||||||||| |||||||| ||||    
T  36222431 ggtgccctaggcagttgagttgat-tttctaacataaactgattaaaaacaaagaaagattggtttttagaagatt-gagagaagtatggttaagtcctt 36222528  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| ||||||| |||||||||    
T  36222529 cgaatcctccgaagttctcctatg 36222552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 23759730 - 23759852
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtgtggttaagacct 400  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||  ||||||||| |||||||| |||    
T  23759730 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatc-gagagaagtatggttaagtcct 23759827  T
Q  401 tcgaatcatccgaagctctcctatg 425  Q
    ||||||| ||| |||||||||||||    
T  23759828 tcgaatcctccaaagctctcctatg 23759852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 24423205 - 24423286
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaat 256  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||| | | |||||||||    
T  24423205 ttgatatacttttagcaagtgtactaaaaatacattgaagtaataaaatttataagttcgtctccacatgaattgtttcaat 24423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 6967246 - 6967149
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  6967246 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 6967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 17863241 - 17863338
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  17863241 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 17863338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 36843104 - 36843181
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  36843104 aaaacaataaaag-ttggttttatgaatattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 36843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 422
Target Start/End: Complemental strand, 11279614 - 11279496
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattgg-ttttagaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| ||||||||||||||  ||||||||| |  ||||||||| |||||||| ||| ||||||||| |||||||| ||||    
T  11279614 ggtgccctaggcagttgagttgat-tttgtaacataaactgattaaaaacgaataaagattggtttttagaagatt-gagagaagtatggttaagtcctt 11279517  T
Q  402 cgaatcatccgaagctctcct 422  Q
    |||||| | ||||| ||||||    
T  11279516 cgaatctttcgaagttctcct 11279496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 425
Target Start/End: Original strand, 46846478 - 46846556
Alignment:
Q  347 aaaaacaataaaagattgg-ttttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||| ||||||| ||| |||||    
T  46846478 aaaaacaataaaagattggtttttagaaaatt-gagagaagtatggttaagtccttcgaatcctccgaagttcttctatg 46846556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 17866500 - 17866597
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||| ||||||||||||| || |||| |||||||||    
T  17866500 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggtttagaccttcgaatcctctgaagttctcctatg 17866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 26808524 - 26808577
Alignment:
Q  212 aagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  26808524 aagtaataaattttataagttcgtatccacagagactgtttcaatttctactcg 26808577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 9765880 - 9765803
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||| |||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  9765880 aaaataataaaag-ttggttttaagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 9765803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 24783487 - 24783410
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||| ||||||| |||| ||||    
T  24783487 aaaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacctttgaatcctccgaagttctcatatg 24783410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 294930 - 294866
Alignment:
Q  360 gattggttttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||||||||||||| ||||||||| |||||||| | |||||||| ||||||| |||||||||    
T  294930 gattggttttagaaaatt-gagagaagtatggttaagtctttcgaatcctccgaagttctcctatg 294866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 1636702 - 1636781
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  1636702 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 1636781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 5189465 - 5189544
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  |||||||||| |||||||| |||||||| |||||||||||||||| |||||||||    
T  5189465 ttagcaagtgtactaact-tatatcgaagtaataaactttataagattcgtatccacagggactgtttcaacttctactcg 5189544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 44672797 - 44672876
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  44672797 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 44672876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 20436985 - 20436931
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||  |||||||| |||| |||||||||||||||||||||    
T  20436985 aagtaataaaatttataacattcgtatccacagagactgtttcaatttctactcg 20436931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 1960347 - 1960306
Alignment:
Q  183 tttttagcaagtgtactaaaaatatatttaagtaataaaatt 224  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  1960347 tttttagcaagtgtactaaaaatatatcaaagtaataaaatt 1960306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 1633482 - 1633536
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| ||||| || | |||||||||||||| |||||||||    
T  1633482 aagtaataaaatttataagattcgtttccaaagggactgtttcaacttctactcg 1633536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 5241963 - 5242001
Alignment:
Q  212 aagtaataaaatttataagttcgtatctacagggactgt 250  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  5241963 aagtaataaaatttataagtttgtatccacagggactgt 5242001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 10345535 - 10345483
Alignment:
Q  171 attgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    |||| ||||| | |||||||||||||||||||||| |||  ||||||||||||    
T  10345535 attgctgatagaattttagcaagtgtactaaaaatgtatcgaagtaataaaat 10345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 6e-84; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 175 - 425
Target Start/End: Complemental strand, 34066595 - 34066346
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnnta 274  Q
    |||||| | |||||| ||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||             
T  34066595 ttgataaacttttagtaagtgtactaaaa-tatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcggaaaaaact 34066497  T
Q  275 ttaaaataaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaa 374  Q
    ||||||||||||||||||| |||||||||||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34066496 ttaaaataaaggatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggttttagaaa 34066397  T
Q  375 attagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  34066396 attagagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 34066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 275 - 425
Target Start/End: Original strand, 16190272 - 16190421
Alignment:
Q  275 ttaaaataaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaa 374  Q
    ||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16190272 ttaaaataaaggatgtattaaattcaatggtgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaat-aaagattggttttagaaa 16190370  T
Q  375 attagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||| |||||||| ||||||||||||||||||| ||||||| |||||||||    
T  16190371 attaaagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 16190421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 184 - 382
Target Start/End: Complemental strand, 8435478 - 8435280
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||          |||||||||    
T  8435478 ttttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgcatccacatggactgtttcaatttctactctgcaaaagcgttaaaataa 8435379  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||||| |||||||| ||||||||| || |||||||||| ||||||||||||||  | ||||||||||||||| | | |||||||||||||||||    
T  8435378 aggatgtattaaattcaagagtgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaattagaga 8435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 425
Target Start/End: Original strand, 22456496 - 22456736
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||           ||||||||    
T  22456496 ttttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcagcaaaaacgataaaataa 22456595  T
Q  284 aggatgtatttaattc-aagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||||| ||||| || | |||| ||| || |||  ||| | ||| ||| |||||| | |||||||| ||||||| |||||| | | |||||| |||    
T  22456596 aggatgtattaaattcaaaagttgccataggcagttggattggtttttataa-ataaactatttaaaaacgataaaagcttggttct-ggaaattaaaga 22456693  T
Q  383 gaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||   |||| |||||||||||||| ||||||| |||||||||    
T  22456694 gaaaaatggtcaagaccttcgaatcctccgaagttctcctatg 22456736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 286 - 425
Target Start/End: Complemental strand, 1936770 - 1936628
Alignment:
Q  286 gatgtatttaattcaaggg--tgccctagacaattgagttgatgtttgtaacataaac-gaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||| ||||||| ||  || ||||| || ||||||||||  ||||| ||||||| |||||||||||  |||||  |||||||||||||||||||||    
T  1936770 gatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaaattttggttttagaaaattagaga 1936671  T
Q  383 gaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||    
T  1936670 gaagtatggttaagaccttcgaatcctccgaagttctcctatg 1936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 32506005 - 32506098
Alignment:
Q  332 taacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  32506005 taacataaacgaattaaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 32506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 22447952 - 22448032
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  22447952 ttttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcatatccacagggactgtttcaatttctactc 22448032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 22453186 - 22453266
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  22453186 ttttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcatatccacagggactgtttcaatttctactc 22453266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 49148140 - 49148060
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    |||||| |||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49148140 ttttagtaagtgtactaaaaataaatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactc 49148060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 372
Target Start/End: Original strand, 23990138 - 23990325
Alignment:
Q  184 ttttagcaagtgtactaaaaa-tatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaata 282  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||  |||| ||| |||||||||| | | |         ||||||||    
T  23990138 ttttagcaagtgtactaaaaaatatatcgaagtaatcaaatttataagttcgtatc--caggaactatttcaatttcaaattggaaaaagcgttaaaata 23990235  T
Q  283 aaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttaga 372  Q
    ||||||||||| ||||||    ||| |||| || ||||||| || ||||||||||| ||| ||||||||||||||||||| |||||||||    
T  23990236 aaggatgtattaaattcagtaatgctctaggcagttgagttaatttttgtaacatatacggattaaaaacaataaaagataggttttaga 23990325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 17618865 - 17618944
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctact 263  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  17618865 ttttagcaaatgtactaaaaatatatcgaagtaataaaatttataagttcatattcacagggactgtttcaatttctact 17618944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 10765018 - 10764921
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  10765018 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 10764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 13493361 - 13493264
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  13493361 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 13493264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 425
Target Start/End: Complemental strand, 39546388 - 39546244
Alignment:
Q  282 aaaggatgtatttaattcaagggt-gccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaa-attag 379  Q
    |||||||||||| |||||||  || ||||||| || |||  ||| | |||||||| |||||| |   ||||||||||||| ||||||||| ||| |||||    
T  39546388 aaaggatgtattaaattcaattgttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaaag-ttggttttaaaaatattag 39546290  T
Q  380 agagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||| ||||||||||||||||||| ||||||| |||| ||||    
T  39546289 agagaagtatggttaagaccttcgaatcctccgaagttctcatatg 39546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 13496086 - 13495989
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||| ||||| ||||||| |||||||||    
T  13496086 tttgtaacataaacgtaaataaaacaataaaag-ttgattttaagaatattagagagaagtatggttaagacctttgaatcctccgaagttctcctatg 13495989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 14159092 - 14159146
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  14159092 aagtaataaaatttataagattcgtatctacagggactgtttcaacttctactcg 14159146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 3087507 - 3087585
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctact 263  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||||| |||||  |||| ||||||| ||||||||||    
T  3087507 ttttaacaagtgtactaaaa-tatatcgaagtaataaaatttataagtttgtatccgcaggaactgttttaatttctact 3087585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 38518012 - 38518075
Alignment:
Q  109 atgtaaaagg-taataaataacaattcttttagtttttaacgtcagtatcaaggatcaatttga 171  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||    
T  38518012 atgtaaaagggtaataaataacaattcttttagttcttaacatcaatatcagggatcaatttga 38518075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 28138600 - 28138692
Alignment:
Q  173 tgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||||| ||  ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  28138600 tgttgatagataattagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 28138692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 28141863 - 28141942
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  28141863 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 28141942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 25662860 - 25662938
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactc 264  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||    
T  25662860 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatccacatggactgtttcaacttctactc 25662938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 27282274 - 27282351
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||| ||| |||||||||| ||| ||||||||||||| |||||||||| |||||||  ||||||| |||||||||    
T  27282274 aaaacaattaaa-attggttttatgaatattagagagaagtatggttaagactttcgaattctccgaagttctcctatg 27282351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 34732100 - 34732157
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagtt 232  Q
    |||||| ||||||||||||||||||||||||  |   |||||||||||||||||||||    
T  34732100 ttgataaatttttagcaagtgtactaaaaatgaaccgaagtaataaaatttataagtt 34732157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 2405872 - 2405831
Alignment:
Q  182 atttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    |||||||||||||||||||||||| |||  ||||||||||||    
T  2405872 atttttagcaagtgtactaaaaatgtatcgaagtaataaaat 2405831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 21911049 - 21911128
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||| |||||||||| |||| |||||||| ||| |||||||||||| |||||||||    
T  21911049 ttagcaagtgtactaact-tatatcgaagaaataaaatttgtaagattcgtatccacatggactgtttcaacttctactcg 21911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 6e-72; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 199 - 425
Target Start/End: Complemental strand, 16883903 - 16883677
Alignment:
Q  199 taaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataaaggatgtatttaatt 298  Q
    |||||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||         ||||||||||||||||||| ||||    
T  16883903 taaaaatatatcgaagtaataaaatttataagttcgtatccgcagggactgtttcaatttctactcggtaaaagcgttaaaataaaggatgtattaaatt 16883804  T
Q  299 caagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagac 398  Q
    ||||||| |||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16883803 caagggttccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtatggttaagac 16883704  T
Q  399 cttcgaatcatccgaagctctcctatg 425  Q
     |||||||| | ||||| |||||||||    
T  16883703 attcgaatccttcgaagttctcctatg 16883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 184 - 425
Target Start/End: Original strand, 20527164 - 20527407
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||||||||         |||||||||    
T  20527164 ttttagcaagtgtactacaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcgatttctactcgataaaagcgttaaaataa 20527263  T
Q  284 aggatgtatttaattcaagggt-gccctagacaattgagttgatgtttgtaacataaacg-aattaaaaacaataaaagattggtttt-agaaaattaga 380  Q
    | |||||||| ||||||| ||| ||||||| || |||| ||||| |||||||| |||||  || ||||||||||||||| |||||||| |||| ||||||    
T  20527264 atgatgtattaaattcaaaggttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaaag-ttggttttaagaatattaga 20527362  T
Q  381 gagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||    
T  20527363 gagaagtatggttaagaccttcgaatcctccgaagttctcctatg 20527407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 186 - 382
Target Start/End: Original strand, 11183841 - 11184037
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataaag 285  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||||| |         |||||||||||    
T  11183841 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcatatccacagggactgtttcaatttctacttggaaaaaacgttaaaataaag 11183940  T
Q  286 gatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||| |||||||| || |||||| || |||||||||| ||||||||||||||| | ||||||||||||||| | | |||||||||||||||||    
T  11183941 gatgtattaaattcaagagttccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaattagaga 11184037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 425
Target Start/End: Original strand, 12980496 - 12980736
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||          |||||||||    
T  12980496 ttttagcaagtgtactaaaaataaattgaagtaataaaatttataagttcgtatccacatggactgtttcaatttctactcagcaaaaacgttaaaataa 12980595  T
Q  284 aggatgtatttaattc-aagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||||| ||||| || | |||||||| || |||  ||| | ||| ||| |||||| | |||||||| ||||||| |||||| | |||||||| |||    
T  12980596 aggatgtattaaattctaaagttgccctaggcagttggattggtttttataa-ataaactatttaaaaacgataaaagcttggttct-gaaaattaaaga 12980693  T
Q  383 gaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||   |||| |||||||||||||| ||||||| |||||||||    
T  12980694 gaaaaatggtcaagaccttcgaatcctccgaagttctcctatg 12980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 282 - 425
Target Start/End: Original strand, 19664766 - 19664909
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 381  Q
    |||||||||||| ||||||||| |||||||| || |||  ||| | ||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  19664766 aaaggatgtattaaattcaaggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattagag 19664865  T
Q  382 agaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||| || ||||||||||||||||||| ||||||| |||||||||    
T  19664866 agatgtatggttaagaccttcgaatcctccgaagttctcctatg 19664909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 28118192 - 28118050
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||         |||||||||    
T  28118192 ttttagcaagtgtattaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcggcaaaagcgttaaaataa 28118093  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    ||||| |||| ||||||| |||||||||| || ||||||||||    
T  28118092 aggatatattaaattcaatggtgccctaggcagttgagttgat 28118050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 184 - 425
Target Start/End: Original strand, 12983383 - 12983623
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||| ||||||||||||||||||          |||||||||    
T  12983383 ttttagcaagtgtactaaaaataaatcgaagtaataaaatttataagttcgtatccacaggggctgtttcaatttctactcagcaaaaacgttaaaataa 12983482  T
Q  284 aggatgtatttaattc-aagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||||| ||||| || | |||||||| || |||  ||| | ||| ||| |||||| | |||||||| ||||||| |||||| | | |||||| |||    
T  12983483 aggatgtattaaattcaaatgttgccctaggcagttggattggtttttataa-ataaactatttaaaaacgataaaagcttggttct-ggaaattaaaga 12983580  T
Q  383 gaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||   |||| |||||||||||||| ||||||| |||||||||    
T  12983581 gaaaaatggtcaagaccttcgaatcctccgaagttctcctatg 12983623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 16731688 - 16731608
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16731688 ttttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactc 16731608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 423
Target Start/End: Complemental strand, 15540714 - 15540574
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 381  Q
    |||||||||||| ||||||||| | |||||| || |||||||||| ||| ||| ||||| | ||||||||||||||||| || |||||||||||||| ||    
T  15540714 aaaggatgtattaaattcaaggtttccctaggcagttgagttgat-tttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaag 15540616  T
Q  382 agaagtgtggttaagaccttcgaatcatccgaagctctccta 423  Q
    |||  | ||||||||||||||||||| ||||||| |||||||    
T  15540615 agatttatggttaagaccttcgaatcctccgaagttctccta 15540574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 286 - 425
Target Start/End: Complemental strand, 32427441 - 32427303
Alignment:
Q  286 gatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaa 385  Q
    |||||||| ||||||||| |||||||| || |||  ||| | ||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||     
T  32427441 gatgtattaaattcaaggttgccctag-cagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaattagagagat 32427343  T
Q  386 gtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    || || |||||||||| ||||| || |||| |||||||||    
T  32427342 gtttgattaagacctttgaatcctctgaagttctcctatg 32427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 9313545 - 9313686
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||          |||||||||    
T  9313545 ttttaacaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaaggactgtttcaatttctactcagcaaaagcgttaaaataa 9313644  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    ||||| |||| ||||||| || ||||||| || ||||||||||    
T  9313645 aggatatattaaattcaatgg-gccctaggcagttgagttgat 9313686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 15578674 - 15578755
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15578674 ttttagcaagtgtattaaaaatatatcgaaggaataaaatttataagttcgtatctacagggactatttcaatttctactcg 15578755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 425
Target Start/End: Complemental strand, 15535200 - 15535058
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 381  Q
    |||||||||||| ||||||||| |||||||| || |||||||||| ||||||| | |||   ||||||||||||||||| ||||||||| ||||||| ||    
T  15535200 aaaggatgtattaaattcaaggttgccctaggcagttgagttgat-tttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaattaaag 15535102  T
Q  382 agaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
     || || |||||||||||||| |||| ||||||| | |||||||    
T  15535101 tgatgtatggttaagaccttcaaatcctccgaagttttcctatg 15535058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 13017311 - 13017433
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtgtggttaagacct 400  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||| ||||||||| |||||||| |||    
T  13017311 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaatt-gagagaagtatggttaagtcct 13017408  T
Q  401 tcgaatcatccgaagctctcctatg 425  Q
    ||||||| ||| |||||||||||||    
T  13017409 tcgaatcctccaaagctctcctatg 13017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 30978333 - 30978455
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtgtggttaagacct 400  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||| ||||||||| |||||||| |||    
T  30978333 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 30978430  T
Q  401 tcgaatcatccgaagctctcctatg 425  Q
    ||||||| ||| |||||||||||||    
T  30978431 tcgaatcctccaaagctctcctatg 30978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 20189189 - 20189269
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||  ||||||||||||| |||||    
T  20189189 ttttagcaagtgtattaaaaatatatcgaagtaataaaatttataagttcgtatctatagaaactgtttcaatttatactc 20189269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 22146802 - 22146722
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||  ||||||||||||| |||||    
T  22146802 ttttagcaagtgtattaaaaatatatcgaagtaataaaatttataagttcgtatctatagaaactgtttcaatttatactc 22146722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 2558687 - 2558596
Alignment:
Q  58 atctaatagttagatttttataataattcatgcatgaaacttcatttcaaa-atgtaaaaggtaataaataacaattcttttagtttttaac 148  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||| |||| |||||||||| |||| |||||||||    
T  2558687 atctattagttagattgttataataattcatggatgaaacttcaattcaaacatgtaaaagataatcaataacaatttttttcgtttttaac 2558596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 2773154 - 2773245
Alignment:
Q  174 gttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||| | ||||||||||||||||||||||  ||  |||||||| |||||||||||||||||| || |||| ||||||||||||||||||    
T  2773154 gttgatagacttttagcaagtgtactaaaaatgaatcgaagtaatataatttataagttcgtatccactgggattgtttcaatttctactcg 2773245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 425
Target Start/End: Complemental strand, 22221845 - 22221726
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| || ||||  ||||| ||||||||||||||||  ||||||||| |||||||| ||||||||  |||||||| ||||    
T  22221845 ggtgccctaggcagttgagttgat-ttagtaa--taaactaattaaaaacaataaagaattggtttttagaaaatt-gagagaagcatggttaagtcctt 22221750  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| |||||||||||||||||    
T  22221749 cgaatcctccgaagctctcctatg 22221726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 425
Target Start/End: Complemental strand, 22247680 - 22247561
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| || ||||  ||||| ||||||||||||||||  ||||||||| |||||||| ||||||||  |||||||| ||||    
T  22247680 ggtgccctaggcagttgagttgat-ttagtaa--taaactaattaaaaacaataaagaattggtttttagaaaatt-gagagaagcatggttaagtcctt 22247585  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| |||||||||||||||||    
T  22247584 cgaatcctccgaagctctcctatg 22247561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 14790717 - 14790620
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  14790717 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14790620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 14795745 - 14795648
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  14795745 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 32704401 - 32704498
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  32704401 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 32704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 27649180 - 27649104
Alignment:
Q  349 aaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||    
T  27649180 aaacaataaaag-ttggttttaagaaaattagagcgaagtatggttaagaccttcgaatcctccgaagttctcctatg 27649104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 1838552 - 1838475
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||| |||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  1838552 aaaagaataaaag-ttggttttaagaatattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 1838475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 6514356 - 6514283
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    |||||| | |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||| |||||||    
T  6514356 ttgatagacttttagcaagtgtactaaaactatcg--aagtaataaaatttataagttcgtatctacaaggactgt 6514283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 14281289 - 14281353
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||| ||||| |||| ||||||    
T  14281289 ttttagcaagtgtactaaaactatag--aagtaataaaatttataagtttgtatccacagagactgt 14281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 28111576 - 28111640
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    |||||||||||||||||||| |||    ||||||||||||||||||||||||||| ||| |||||||    
T  28111576 ttttagcaagtgtactaaaactatcg--aagtaataaaatttataagttcgtatccacatggactgt 28111640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 13005546 - 13005492
Alignment:
Q  182 atttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatc 238  Q
    |||||||||||||||||||||| |||    |||||||||||||||||||||||||||    
T  13005546 atttttagcaagtgtactaaaactatcg--aagtaataaaatttataagttcgtatc 13005492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 965104 - 965025
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||  |||||||  |||||||||||||||| |||||||||    
T  965104 ttagcaagtgtactaact-tatatcgaagtaataaaatttataaaattcgtattcacagggactgtttcaacttctactcg 965025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 28107524 - 28107584
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacaggga 246  Q
    ||||| |||||||||||||| |||    ||||||||||||||||||||||||||| |||||||    
T  28107524 ttttaacaagtgtactaaaactatcg--aagtaataaaatttataagttcgtatccacaggga 28107584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 5260170 - 5260099
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggact 248  Q
    |||||| | ||||||||| |||||||||| |||    ||||||||||||||||||||||||||| ||| |||||    
T  5260170 ttgatagacttttagcaaatgtactaaaactatcg--aagtaataaaatttataagttcgtatccacaaggact 5260099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 12747127 - 12747090
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  12747127 aagttcgtatccacaaggactgtttcaatttctactcg 12747090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 28894281 - 28894318
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  28894281 aagttcgtatccacatggactgtttcaatttctactcg 28894318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 10290336 - 10290296
Alignment:
Q  183 tttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  10290336 tttttagcaagtgtactaaaaatgtatcgaagtaataaaat 10290296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 17106391 - 17106431
Alignment:
Q  183 tttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  17106391 tttttagcaagtgtactaaaaatgtatcgaagtaataaaat 17106431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 184 - 428
Target Start/End: Original strand, 41778746 - 41778988
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||         |||||||||    
T  41778746 ttttagcaactgtactaaaaatatatcgaagtaataaaatttataagttcgtat-tacaaggactgtttcaatttctactcggcaaaaacgttaaaataa 41778844  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagag 383  Q
    | |||||||| |||||||||||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||    
T  41778845 aagatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagatt-gatttagaagattaaagag 41778943  T
Q  384 aagtgtggttaagaccttcgaatcatccgaagctctcctatgcta 428  Q
    |||| |||||||||||||| |||| ||||||| ||||||||||||    
T  41778944 aagtatggttaagaccttcaaatcttccgaagttctcctatgcta 41778988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 173 - 425
Target Start/End: Complemental strand, 13097278 - 13097022
Alignment:
Q  173 tgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnn 272  Q
    |||||||| | ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||           
T  13097278 tgttgataaacttttagcaagtgtactaaaaatatatcgaagtaataaaatttata-gttcgtattcacagggactatttcaatttctactcggcaaaaa 13097180  T
Q  273 tattaaaataaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacg----aattaaaaa-caataaaagattggtt 367  Q
      ||||||||||||||||||| ||||||| |||| ||||   | |||| ||| | | ||||||||||| |    ||| ||||| |||||||||||| |||    
T  13097179 cgttaaaataaaggatgtattaaattcaatggtggcctatggagttgaattggtttgtgtaacataaaagtgataataaaaaaacaataaaagattagtt 13097080  T
Q  368 ttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||| | |||||||    
T  13097079 ttagaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg 13097022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 44008531 - 44008304
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||| |         |||||||||    
T  44008531 ttttaacaagtgtactaaaaatatatcaaagtaataaaatttataagttcgtatttacatggactgtttcaatttctacttggcaaaaacgttaaaataa 44008432  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagag 383  Q
    |  ||||||| ||||||| ||||||||||||| |||| ||||| | ||||||| ||| | ||||||| ||       |||||||||||||||||||| ||    
T  44008431 attatgtattaaattcaatggtgccctagacagttgatttgatttatgtaacaaaaaaggattaaaagca-------attggttttagaaaattagaaag 44008339  T
Q  384 aagtgtggttaagaccttcgaatcatccgaagctc 418  Q
    || | |||||| |||||||||||| ||||||||||    
T  44008338 aattatggttatgaccttcgaatcctccgaagctc 44008304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 12575400 - 12575533
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 381  Q
    |||||||||||| ||||||| |||||||||| || |||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  12575400 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggttttagaaaattagag 12575499  T
Q  382 agaagtgtggttaagaccttcgaatcatccgaag 415  Q
    |||||| ||||||||||| | ||||| |||||||    
T  12575500 agaagtatggttaagaccattgaatcctccgaag 12575533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 12820639 - 12820730
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttat-aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||| | ||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  12820639 ttgataaacttttagcaagtgtgctaaaaatatatcgaagtaataaaatttataaagttcgtatccacatggactgtttcaatttctactcg 12820730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 14418585 - 14418467
Alignment:
Q  305 tgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcg 403  Q
    |||||||| || ||||||||  |||| |||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||| ||||    
T  14418585 tgccctaggcagttgagttg--gtttttaacataaacaaattaaaaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacattcg 14418489  T
Q  404 aatcatccgaagctctcctatg 425  Q
    |||| ||||||  |||||||||    
T  14418488 aatcctccgaatttctcctatg 14418467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 587672 - 587591
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||| |||||||| ||||||||||   |||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  587672 ttttaacaagtgtattaaaaatataacgaagtaataaaatttataagttcgtatccgcatggactgtttcaatttctactcg 587591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 626250 - 626331
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||| |||||||| ||||||||||   |||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  626250 ttttaacaagtgtattaaaaatataacgaagtaataaaatttataagttcgtatccgcatggactgtttcaatttctactcg 626331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 41836317 - 41836394
Alignment:
Q  304 gtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    ||||||||| || |||||||||  ||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  41836317 gtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaag-ttggttttagaaaatttgaga 41836394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 5952489 - 5952392
Alignment:
Q  168 ttgattgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||| |||||| ||  ||||||||||||||||   |||||  ||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||    
T  5952489 ttgatttttgatacataattagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatccacaaggactgtttcaacttctactcg 5952392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 27805367 - 27805449
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||||||  ||  || |||||||||||||||| ||||| |  ||||||| ||||||||||||||||||    
T  27805367 ttttagcaagtgtactaaaaatgcatcaaaataataaaatttataagattcgtcttcacagggattgtttcaatttctactcg 27805449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 45155039 - 45155101
Alignment:
Q  183 tttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggac 247  Q
    ||||||||||||||||||||| |||    ||||||||||||||||||||||||||| ||||||||    
T  45155039 tttttagcaagtgtactaaaactatcg--aagtaataaaatttataagttcgtatccacagggac 45155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 2847590 - 2847669
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||| ||||||||| |||||||| |||||||||||||||| |||||||||    
T  2847590 ttagcaagtgtactaact-tatatcgaagtaataacatttataagattcgtatccacagggactgtttcaacttctactcg 2847669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 37681279 - 37681350
Alignment:
Q  172 ttgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacaggg 245  Q
    ||||||||| | |||||||||||||||||| |||||    ||||||||||||||||||||| ||||| ||||||    
T  37681279 ttgttgatagacttttagcaagtgtactaataatatcg--aagtaataaaatttataagtttgtatccacaggg 37681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 33383705 - 33383626
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||| ||||||||| |||||||| ||| |||||||||||| |||||||||    
T  33383705 ttagcaagtgtactaact-tatatggaagtaataatatttataagattcgtatccacaaggactgtttcaacttctactcg 33383626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 5538535 - 5538582
Alignment:
Q  176 tgatatatttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||| |||||||||||||||||||||||| |||  ||||||||||||    
T  5538535 tgatagatttttagcaagtgtactaaaaatgtatcgaagtaataaaat 5538582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 36710408 - 36710472
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    |||||||||||||||||| | |||    |||||||||| |||||||||||||||| |||||||||||    
T  36710408 ttttagcaagtgtactaagactatca--aagtaataaagtttataagttcgtatccacagggactgt 36710472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 41836415 - 41836466
Alignment:
Q  374 aattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||| ||||||||  ||||||||||||||||||| ||||||| |||||||||    
T  41836415 aatttgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 41836466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 5828345 - 5828308
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  5828345 aagttcgtatccacatggactgtttcaatttctactcg 5828308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 12104222 - 12104298
Alignment:
Q  185 tttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttcta 261  Q
    |||||||||||| |||||  |||||  ||||||||||||||||||| || ||||| | |||||||||||||| |||||    
T  12104222 tttagcaagtgtgctaaac-tatatcgaagtaataaaatttataagatttgtatccatagggactgtttcaacttcta 12104298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 33137003 - 33136959
Alignment:
Q  86 catgcatgaaacttcatttcaaa-atgtaaaaggtaataaataac 129  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||    
T  33137003 catggatgaaacttcatttcaaatatgcaaaaggtaataaataac 33136959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 186 - 382
Target Start/End: Complemental strand, 50097020 - 50096825
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataaag 285  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||         |||||||||||    
T  50097020 ttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagggactgtttcaatttctactcggaaaaaa-gttaaaataaag 50096922  T
Q  286 gatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    |||||||| |||||||| ||||||||  || |||||||||| ||||||||||||||| | |||||||| |||||| | | |||||||||||||||||    
T  50096921 gatgtattaaattcaagagtgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaattagaga 50096825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 265
Target Start/End: Complemental strand, 9155176 - 9155086
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||| | ||||||||||||||||||||||| ||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9155176 ttgataaacttttagcaagtgtactaaaaataaatcgaaataataaaatttataagttcgtatccacagggactgtttcaatttctactcg 9155086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 22626434 - 22626554
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttc 402  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  ||||| ||||||||||| ||||||||| |||||||| |||||    
T  22626434 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggatttagaaaatt-gagagaagtatggttaagtccttc 22626531  T
Q  403 gaatcatccgaagctctcctatg 425  Q
    ||||| ||| |||||||||||||    
T  22626532 gaatcctccaaagctctcctatg 22626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 39563633 - 39563754
Alignment:
Q  304 gtgccctagacaattgagttgatgtttgtaacataaacgaa-ttaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttc 402  Q
    ||||||||| || |||||||||| |||||||||||||| || ||||||| | ||||||||||||||||||||||  ||||||||  |||||||| |||||    
T  39563633 gtgccctaggcagttgagttgat-tttgtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatctgagagaagaatggttaagtccttc 39563731  T
Q  403 gaatcatccgaagctctcctatg 425  Q
    ||||| ||||| |||||||||||    
T  39563732 gaatcctccgacgctctcctatg 39563754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 9158349 - 9158268
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  9158349 ttttagcaagtgtactaaaaataaatcgaagtaataaaatttataagtatgtatttacagggactgtttcaatttctactcg 9158268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 11138692 - 11138812
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttc 402  Q
    |||||||||| || |||||||||| || |||||||||||  ||||||||||||| |  ||||| || |||||||| ||||||||| |||||||| |||||    
T  11138692 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaatatagaattggattcagaaaatt-gagagaagtatggttaagtccttc 11138789  T
Q  403 gaatcatccgaagctctcctatg 425  Q
    ||||| ||| |||||||||||||    
T  11138790 gaatcctccaaagctctcctatg 11138812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 13979565 - 13979488
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  13979565 aaaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacctttgaatcctccgaagctctcctatg 13979488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 46731561 - 46731496
Alignment:
Q  360 gattggttttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||| ||||||| |||| ||||    
T  46731561 gattggttttagaaaattagagagatgtaaggttaagaccttcgaatcctccgaagttctcatatg 46731496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 10557812 - 10557891
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  10557812 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 10557891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 18552028 - 18551950
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctac 262  Q
    |||||||||||||| ||||||   ||| ||||||||||||| | ||||||||||| ||  ||||||||| |||||||||    
T  18552028 ttttagcaagtgtaataaaaaagaattgaagtaataaaattcacaagttcgtatcaactaggactgttttaatttctac 18551950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 19194060 - 19194006
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||    
T  19194060 aagtaataaaatttataagattcgtatccacaaggactgtttcaatatctactcg 19194006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 26273373 - 26273320
Alignment:
Q  212 aagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||||||||||||||||||||| |||||| ||| ||||| || |||||||||    
T  26273373 aagtaataaaatttataagttcgtctctacaaggattgtttaaacttctactcg 26273320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 10902385 - 10902345
Alignment:
Q  183 tttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  10902385 tttttagcaagtgtactaaaaatgtatctaagtaataaaat 10902345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 25261030 - 25260985
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataa 229  Q
    ||||||||||||||||||||||  ||  ||||||||||||||||||    
T  25261030 ttttagcaagtgtactaaaaatgcatcaaagtaataaaatttataa 25260985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 20536436 - 20536530
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttt-tagaaaatt 377  Q
    |||||||||| | |||||||||||||||||| || ||| |||||  | ||||||| ||||| | | ||||||||||||| ||||||| |||||||||    
T  20536436 aaaggatgtagtaaattcaagggtgccctaggcagttgggttgacttgtgtaacacaaacgtaat-aaaacaataaaag-ttggtttatagaaaatt 20536530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 41977454 - 41977406
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    |||||| |||||||||||||||| ||||||| |||  ||||||||||||    
T  41977454 ttgatagatttttagcaagtgtattaaaaatgtatcgaagtaataaaat 41977406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 17944980 - 17944838
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||||||||        ||||||||||    
T  17944980 ttttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacagagactgtttcaatttctactcggcaaaagcattaaaataa 17944881  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    ||||| |||| ||||||| |||||||||| || ||||||||||    
T  17944880 aggatatattaaattcaatggtgccctaggcagttgagttgat 17944838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 424
Target Start/End: Original strand, 11988974 - 11989108
Alignment:
Q  290 tatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgt 389  Q
    |||| ||||||| ||| |||||| || |||||||||| ||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||      
T  11988974 tattaaattcaatggtcccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagagaagtaa 11989073  T
Q  390 ggttaagaccttcgaatcatccgaagctctcctat 424  Q
    |||||||||||||||||| ||| ||| ||||||||    
T  11989074 ggttaagaccttcgaatcctccaaagttctcctat 11989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 425
Target Start/End: Complemental strand, 33575212 - 33575091
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  ||||||||| |||||||| ||||||||| |||||||| ||||    
T  33575212 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttagaaaatt-gagagaagtatggttaagtcctt 33575115  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| |||||||||||||||||    
T  33575114 cgaatcctccgaagctctcctatg 33575091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 26712465 - 26712586
Alignment:
Q  304 gtgccctagacaattgagttgatgtttgtaacataaacgaa-ttaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttc 402  Q
    |||||||||||| |||||||||| |||||||||||||| || ||||||| | ||||||||||||||||||||||  ||||||||  |||||||| | |||    
T  26712465 gtgccctagacagttgagttgat-tttgtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatctgagagaagaatggttaagtctttc 26712563  T
Q  403 gaatcatccgaagctctcctatg 425  Q
    ||||| ||||| |||||||||||    
T  26712564 gaatcctccgacgctctcctatg 26712586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 26982203 - 26982324
Alignment:
Q  304 gtgccctagacaattgagttgatgtttgtaacataaacgaa-ttaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttc 402  Q
    |||||||||||| |||||||||| |||||||||||||| || ||||||| | ||||||||||||||||||||||  ||||||||  |||||||| | |||    
T  26982203 gtgccctagacagttgagttgat-tttgtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatctgagagaagaatggttaagtctttc 26982301  T
Q  403 gaatcatccgaagctctcctatg 425  Q
    ||||| ||||| |||||||||||    
T  26982302 gaatcctccgacgctctcctatg 26982324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 422
Target Start/End: Original strand, 15532322 - 15532441
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtgtggttaagacct 400  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||| ||||||||| |||||||| |||    
T  15532322 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 15532419  T
Q  401 tcgaatcatccgaagctctcct 422  Q
    ||||||| ||  ||||||||||    
T  15532420 tcgaatcctctaaagctctcct 15532441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 422
Target Start/End: Original strand, 15542504 - 15542623
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtgtggttaagacct 400  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||| ||||||||| |||||||| |||    
T  15542504 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 15542601  T
Q  401 tcgaatcatccgaagctctcct 422  Q
    ||||||| ||  ||||||||||    
T  15542602 tcgaatcctctaaagctctcct 15542623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 13423287 - 13423368
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||| ||||||||||||  |||||| ||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  13423287 ttttagtaagtgtactaaac-tatattgaagtaataaaatttataagattcgtatctacaaagactgtttcaacttctactcg 13423368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 14616575 - 14616672
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| ||| |||| |||| ||||||||||||| ||||||||||||| ||||| ||||||| |||||||||    
T  14616575 tttgtaacataaacgtaaataaaacaataaaag-ttgattttaagaatattagagagaagtatggttaagacctttgaatcctccgaagttctcctatg 14616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 34405968 - 34405850
Alignment:
Q  305 tgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcg 403  Q
    |||||||| || |||||||| |||  |||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||     
T  34405968 tgccctaggcagttgagttgttgt--gtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagaccttca 34405872  T
Q  404 aatcatccgaagctctcctatg 425  Q
    |||| || |||| |||||||||    
T  34405871 aatcctctgaagttctcctatg 34405850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 35432275 - 35432322
Alignment:
Q  218 taaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  35432275 taaaatttataagttcgtatccacagggactgtttcaatttttactcg 35432322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 22159823 - 22159746
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||||||| |||||||||| ||| ||||||||||| | ||||||||||||| ||||| ||||||| |||||||||    
T  22159823 aaaacaataaaa-attggttttaagaatattagagagaaatatggttaagacctttgaatcctccgaagttctcctatg 22159746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 43103690 - 43103744
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  43103690 aagtaataaaatttataagattcgtatctatagggactgtttcaacttctactcg 43103744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 18239276 - 18239340
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggact 248  Q
    |||||||||||||| |||||||  ||  ||||||||||||||||||||||||||| ||| |||||    
T  18239276 ttttagcaagtgtattaaaaatgaatcgaagtaataaaatttataagttcgtatccacatggact 18239340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 22036203 - 22036124
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  22036203 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 22036124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 36700780 - 36700726
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||    
T  36700780 aagtaataaaatttataagattcatatccacagggactgtttcaacttctactcg 36700726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 22039429 - 22039350
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || | |||||||||||||| |||||||||    
T  22039429 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccatagggactgtttcaacttctactcg 22039350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 7650088 - 7650185
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| ||| |||| |||| ||||||||||||| |||||||||| || ||||| | ||||| ||| |||||    
T  7650088 tttgtaacataaacgtaaataaaacaataaaag-ttgcttttaagaatattagagagaagtatggttaagacatttgaatcctacgaagttcttctatg 7650185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 36357099 - 36357021
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttcta 261  Q
    ||||| ||||||||||||||||  ||  ||||||||| ||||||||| ||||| || ||| |||| |||||||||||||    
T  36357099 ttttaacaagtgtactaaaaatgcatcgaagtaataatatttataagattcgtctccacatggaccgtttcaatttcta 36357021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 28787091 - 28787132
Alignment:
Q  182 atttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    |||||||||||||||||||||||| |||  ||||||||||||    
T  28787091 atttttagcaagtgtactaaaaatgtatcgaagtaataaaat 28787132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 33320725 - 33320762
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  33320725 aagttcgtatccacagggactgcttcaatttctactcg 33320762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 282 - 425
Target Start/End: Original strand, 23673445 - 23673588
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 381  Q
    |||||||||||| ||||||||| |||||||| || |||  |||   ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  23673445 aaaggatgtattaaattcaaggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagag 23673544  T
Q  382 agaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||| || ||||||||||||||||||| ||||||| |||||||||    
T  23673545 agatgtatggttaagaccttcgaatcctccgaagttctcctatg 23673588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 13710169 - 13710072
Alignment:
Q  329 ttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttcgaatcatccg-aagctctcctatg 425  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| | |||||||||||||    
T  13710169 ttgtaacataaacggattaaaaacaataaaagattggttttagaaaatttgagagaagtatggttaagaccttcaaatcatctgaaagctctcctatg 13710072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 30720134 - 30719992
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||         |||||||||    
T  30720134 ttttagcaagtgtactaaaaatatatcgaagtaataaaatttataagtttgtatccacaggggctgtttcaatttctactcggcaaaagcgttaaaataa 30720035  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    ||||| |||| ||||||| |||||| ||| || ||||||||||    
T  30720034 aggatatattaaattcaatggtgccttaggcagttgagttgat 30719992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 40018099 - 40017981
Alignment:
Q  305 tgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttcga 404  Q
    |||||||| || ||||||||||  |||||||||||||| |||||||||||||| ||| |||||| |||||| | ||||||||| ||||||||||||||||    
T  40018099 tgccctaggcagttgagttgat--ttgtaacataaacggattaaaaacaataagagactggtttaagaaaaattgagagaagtatggttaagaccttcga 40018002  T
Q  405 atcatccgaagctctcctatg 425  Q
    ||| |||||| ||||||||||    
T  40018001 atcctccgaaactctcctatg 40017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 36327025 - 36326928
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| ||||||| |||| ||||    
T  36327025 tttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagagagatgtatggttaagacctttgaatcctccgaagttctcatatg 36326928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 425
Target Start/End: Complemental strand, 31626673 - 31626551
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacg-aattaaaaacaataaaagattggttttagaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||  ||||||||  |||||||| | ||    
T  31626673 ggtgccctaggcagttgagttgat-tttgtaacataaaaggaattaaaaataataaaggattggttttagaaaatctgagagaagaatggttaagtcatt 31626575  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| |||||||||||||||||    
T  31626574 cgaatcctccgaagctctcctatg 31626551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 16295019 - 16294900
Alignment:
Q  305 tgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcg 403  Q
    |||||||| || |||||||||| |||||| |||||||  |||||||||||  ||||||| ||||| |||||||| ||||||||| |||||||| ||||||    
T  16295019 tgccctaggcagttgagttgat-tttgtatcataaaccgattaaaaacaaataaagattagttttcagaaaatt-gagagaagtatggttaagtccttcg 16294922  T
Q  404 aatcatccgaagctctcctatg 425  Q
    |||| ||||||| |||||||||    
T  16294921 aatcctccgaagttctcctatg 16294900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 422
Target Start/End: Complemental strand, 31528513 - 31528394
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtgtggttaagacct 400  Q
    |||||||||| || |||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||| ||||||||| |||||||| |||    
T  31528513 ggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 31528416  T
Q  401 tcgaatcatccgaagctctcct 422  Q
    ||||||| ||  ||||||||||    
T  31528415 tcgaatcctctaaagctctcct 31528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 32575851 - 32575930
Alignment:
Q  348 aaaacaataaaagattggtttta-gaaaattagaga--gaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||| ||||||||| ||| ||||||||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  32575851 aaaacaataaaag-ttggttttaagaatattagagaaagaagtatggttaagaccttcgaatcctccgaagctctcctatg 32575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 16881638 - 16881559
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  16881638 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatttacagggactgtttcaacttctactcg 16881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 17039328 - 17039249
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  17039328 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatttacagggactgtttcaacttctactcg 17039249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 35077261 - 35077182
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  35077261 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 35077182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 35080519 - 35080440
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  35080519 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtttccacagggactgtttcaacttctactcg 35080440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 25138701 - 25138740
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  25138701 ttttagcaagtgtactaaaaatatatcgaagtaataaaat 25138740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 43724041 - 43724002
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  43724041 ttttagcaagtgtactaaaaatatatcgaagtaataaaat 43724002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 5666867 - 5666805
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctac 241  Q
    |||||| | |||||||||||||| |||||||||||  ||||||||||    ||||||||||||||||    
T  5666867 ttgatagacttttagcaagtgtattaaaaatatatcgaagtaataaa----ataagttcgtatctac 5666805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 15470804 - 15470760
Alignment:
Q  179 tatatttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    ||||||||||||||| ||||||||||| |||  ||||||||||||    
T  15470804 tatatttttagcaagggtactaaaaatgtatcgaagtaataaaat 15470760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 31427302 - 31427354
Alignment:
Q  172 ttgttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatt 224  Q
    ||||||||| | ||||||||||||||||||||||  ||  |||||||||||||    
T  31427302 ttgttgatagacttttagcaagtgtactaaaaatgcatcgaagtaataaaatt 31427354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 175 - 326
Target Start/End: Complemental strand, 7605 - 7454
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnnta 274  Q
    |||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||             
T  7605 ttgataaacttttagcaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaaggactgtttcaatttctactcggaaaaagcg 7506  T
Q  275 ttaaaataaaggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    |||||||||||||| |||| ||||||| |||||||||| || ||||||||||    
T  7505 ttaaaataaaggatatattaaattcaatggtgccctaggcagttgagttgat 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 425
Target Start/End: Original strand, 26062792 - 26062937
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaatt--ag 379  Q
    |||||||||||| ||||||||| ||||||||  | |||  ||| | ||||||| ||||||| ||||||||||||||||| ||||||||||||||||  ||    
T  26062792 aaaggatgtattaaattcaaggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagag 26062891  T
Q  380 agagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||| || ||||||||||||| ||||| ||||||| |||||||||    
T  26062892 agagatgtatggttaagacctttgaatcctccgaagttctcctatg 26062937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 24605007 - 24605148
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataa 283  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||| |||||||||||||||||||| |         |||||||||    
T  24605007 ttttagcaagtgtactaaaaatatatcgaagtaataaaatctataagttcgtatccacaaggactgtttcaatttctacttggcaaaaacgttaaaataa 24605106  T
Q  284 aggatgtatttaattcaagggtgccctagacaattgagttgat 326  Q
    |||||||||| ||||||| |||| ||||| || ||||||||||    
T  24605107 aggatgtattaaattcaatggtg-cctaggcagttgagttgat 24605148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 264
Target Start/End: Original strand, 7394621 - 7394710
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactc 264  Q
    |||||| | |||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  7394621 ttgataaacttttagcaagtgtactaaaagtatatcgaagtaataaaatttataagttcgtatccacatggactgtttcaatttctactc 7394710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 425
Target Start/End: Complemental strand, 2542028 - 2541886
Alignment:
Q  282 aaaggatgtatttaattcaagggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattgg-ttttagaaaattaga 380  Q
    |||||||||||| ||||||| |||||||||| || ||||||| ||  |||||||||||||| |||||||||||||||| || || |||| |||||||| |    
T  2542028 aaaggatgtattaaattcaatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaattaaa 2541929  T
Q  381 gagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||  || ||||||||||||||||||| || |||| |||| ||||    
T  2541928 gag--gtatggttaagaccttcgaatcctctgaagttctcttatg 2541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 26703235 - 26703323
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctact 263  Q
    |||||| | ||||||||||| ||||||||||  ||  |||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  26703235 ttgatagacttttagcaagtatactaaaaatgcatcaaagtaataaaatttataacttcgtatctacaggaaccgtttcaatttctact 26703323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 647350 - 647447
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| |||| ||||||||||||| ||||||||| ||||||||| || |||| |||||||||    
T  647350 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcagaatattagagagaagtatggttaagatcttcgaatcctctgaagttctcctatg 647447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 650622 - 650719
Alignment:
Q  328 tttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||||||||| |   ||||||||||||| |||||||| | || ||||||||||||| ||||||||||||||||||| || |||| |||||||||    
T  650622 tttgtaacataaacgtaaataaaacaataaaag-ttggttttcataatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 2437040 - 2436966
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactg 249  Q
    |||||| |||||||| || ||||||||||||||||  |||||||||||||||||||||| |||| ||| ||||||    
T  2437040 ttgataaatttttagtaaatgtactaaaaatatatcgaagtaataaaatttataagttcatatccacaaggactg 2436966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 11649328 - 11649405
Alignment:
Q  304 gtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagaga 382  Q
    ||||||||| || |||||||||  ||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  11649328 gtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaag-ttggttttagaaaatttgaga 11649405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 26060733 - 26060653
Alignment:
Q  304 gtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagagagaa 385  Q
    ||||||||| ||  ||||||||| ||||||| ||||| ||| ||||||||||||||| |||||||||||||||| |||||||    
T  26060733 gtgccctaggcaggtgagttgatttttgtaatataaatgaaataaaaacaataaaag-ttggttttagaaaatttgagagaa 26060653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 19859265 - 19859337
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactg 249  Q
    |||||| | ||||| |||||||||||||| ||||   ||||||||||||||||||||||||||| | ||||||||    
T  19859265 ttgatagacttttaacaagtgtactaaaactatag--aagtaataaaatttataagttcgtatccaaagggactg 19859337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 54900122 - 54900044
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactc 264  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||    
T  54900122 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtatccacatggactgtttcaacttctactc 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 53094862 - 53094796
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    |||||||||||||| || ||||  ||  |||||||||| |||||||||||||||| |||||||||||    
T  53094862 ttttagcaagtgtattataaatgaatcgaagtaataaactttataagttcgtatccacagggactgt 53094796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 19821072 - 19821024
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    |||||||| |||||||||||||||||||||| |||  ||||||||||||    
T  19821072 ttgatatacttttagcaagtgtactaaaaatgtatcgaagtaataaaat 19821024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 11649426 - 11649477
Alignment:
Q  374 aattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||| ||||||||  ||||||||||||||||||| ||||||| |||||||||    
T  11649426 aatttgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 11649477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 315
Target Start/End: Complemental strand, 37176955 - 37176867
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataaaggatgtatttaattcaaggg-tgccctagaca 315  Q
    ||||||||||| ||| ||||||||||||||||||||||         ||||||||||||||||||| |||| | ||| |||||||||||    
T  37176955 aagttcgtatccacaaggactgtttcaatttctactcggcaaaagctttaaaataaaggatgtattaaatttatgggttgccctagaca 37176867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 49271032 - 49270993
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaat 223  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  49271032 ttttagtaagtgtactaaaaatatattgaagtaataaaat 49270993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 425
Target Start/End: Complemental strand, 26060635 - 26060589
Alignment:
Q  379 gagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    ||||||||  ||||||||||||||||||| ||||||| |||||||||    
T  26060635 gagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 26060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 48415284 - 48415326
Alignment:
Q  180 atatttttagcaagtgtactaaaaatatatttaagtaataaaa 222  Q
    ||||||||||||||||||||||||| ||||  |||||||||||    
T  48415284 atatttttagcaagtgtactaaaaacatatcgaagtaataaaa 48415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 26060861 - 26060801
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatc 238  Q
    |||||| | |||||||||||||||||||||| |||  |||||||||||   |||||||||||||    
T  26060861 ttgatagacttttagcaagtgtactaaaaatgtatcgaagtaataaaa---ataagttcgtatc 26060801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 41982597 - 41982642
Alignment:
Q  86 catgcatgaaacttcatttcaaa-atgtaaaaggtaataaataaca 130  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||    
T  41982597 catgaatgaaacttaatttcaaacatgtaaaaggtaataaataaca 41982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 56195885 - 56195836
Alignment:
Q  175 ttgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatt 224  Q
    |||||| ||||||||||||||||||||||||  ||  |||||||||||||    
T  56195885 ttgatagatttttagcaagtgtactaaaaatgcatcgaagtaataaaatt 56195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 22884195 - 22884239
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaa 255  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||    
T  22884195 aagtaataaaatttataagattcgtatccacagtgactgtttcaa 22884239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 22935859 - 22935903
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaa 255  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||    
T  22935859 aagtaataaaatttataagattcgtatccacagtgactgtttcaa 22935903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 40795361 - 40795321
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatt 224  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  40795361 ttttagcaagtgtactaaaaatgtatcgaagtaataaaatt 40795321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 56199211 - 56199163
Alignment:
Q  176 tgatatatttttagcaagtgtactaaaaatatatttaagtaataaaatt 224  Q
    ||||| ||||||||||||||||||||||||  ||  |||||||||||||    
T  56199211 tgatagatttttagcaagtgtactaaaaatgcatcgaagtaataaaatt 56199163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 307 - 425
Target Start/End: Complemental strand, 9982 - 9865
Alignment:
Q  307 ccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcgaa 405  Q
    |||||| || |||||||||| || |||||||||||  |||||||||||||||  ||||||||| |||||||| ||||||||| |||||||| ||||||||    
T  9982 ccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaataattggtttttagaaaatt-gagagaagtatggttaagtccttcgaa 9885  T
Q  406 tcatccgaagctctcctatg 425  Q
    || |||||||||||||||||    
T  9884 tcctccgaagctctcctatg 9865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 133 - 251
Alignment:
Q  305 tgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtgtggttaagaccttcg 403  Q
    |||||||| || ||||||||  |||| |||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||| ||||    
T  133 tgccctaggcagttgagttg--gtttttaacataaacaaattaaaaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacattcg 229  T
Q  404 aatcatccgaagctctcctatg 425  Q
    |||| ||||||  |||||||||    
T  230 aatcctccgaatttctcctatg 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 24307 - 24426
Alignment:
Q  303 ggtgccctagacaattgagttgatgtttgtaacataaacgaattaaaaacaataaaagattgg-ttttagaaaattagagagaagtgtggttaagacctt 401  Q
    |||||||||| || |||||||||| || ||||  |||||  |||||||||||||||  ||||| |||||||||||| ||||||||  |||||||| ||||    
T  24307 ggtgccctaggcagttgagttgat-ttagtaa--taaactgattaaaaacaataaagaattggtttttagaaaatt-gagagaagcatggttaagtcctt 24402  T
Q  402 cgaatcatccgaagctctcctatg 425  Q
    |||||| |||||||||||||||||    
T  24403 cgaatcctccgaagctctcctatg 24426  T

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Target: scaffold0567 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 5995 - 6054
Alignment:
Q  366 ttttagaaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||    
T  5995 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatg 6054  T

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Target: scaffold0884 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 4299 - 4378
Alignment:
Q  186 ttagcaagtgtactaaaaatatatttaagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||   |||||  ||||||||||||||||||| |||||||  |||||||||||||||| |||||||||    
T  4299 ttagcaagtgtactaact-tatatcgaagtaataaaatttataagattcgtattcacagggactgtttcaacttctactcg 4378  T

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Target: scaffold0996 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 1691 - 1755
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    |||||||||||||||||||| |||    ||||||||||||||||||||||||||| ||| |||||||    
T  1691 ttttagcaagtgtactaaaactatcg--aagtaataaaatttataagttcgtatccacaaggactgt 1755  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 157417 - 157363
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||    
T  157417 aagtaataaaatttataagattcgaatctacggggactgtttcaacttctactcg 157363  T

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Target: scaffold2047 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold2047
Description:

Target: scaffold2047; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 570 - 623
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactc 264  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  570 aagtaataaaatttataagattcgtatccacagggattgtttcaacttctactc 623  T

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Target: scaffold1657 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 234 - 315
Alignment:
Q  184 ttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgtttcaatttctactcg 265  Q
    |||||||||||||| |||||||  ||  |||||||||||||||||||||||| || |||  || ||||||||| || |||||    
T  234 ttttagcaagtgtattaaaaatgcatcgaagtaataaaatttataagttcgtctccacaaagattgtttcaatctcaactcg 315  T

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Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 2794 - 2847
Alignment:
Q  372 aaaattagagagaagtgtggttaagaccttcgaatcatccgaagctctcctatg 425  Q
    |||||| ||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  2794 aaaatttgagagaagtatcgttaagacctttgaatcctccgaagctctcctatg 2847  T

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Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 13910 - 13873
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  13910 aagttcgtatccacagggactgtttcaatttctactcg 13873  T

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Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 11567 - 11530
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  11567 aagttcgtatccacagggactgtttcaatttatactcg 11530  T

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Target: scaffold2073 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 635 - 700
Alignment:
Q  183 tttttagcaagtgtactaaaaatatatttaagtaataaaatttataagttcgtatctacagggactgt 250  Q
    ||||||||||||||||||||| |||    |||| |||||||||| ||||||||||| |||||||||||    
T  635 tttttagcaagtgtactaaaactatcg--aagtgataaaatttacaagttcgtatccacagggactgt 700  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 90344 - 90436
Alignment:
Q  228 aagttcgtatctacagggactgtttcaatttctactcgnnnnnnntattaaaataaaggatgtatttaattcaaggg-tgccctagacaattg 319  Q
    ||||||||||| ||| ||||||||||||||||||||||         ||||||||||||||||||| |||| | ||| |||||||| ||||||    
T  90344 aagttcgtatccacatggactgtttcaatttctactcggcaaaagcgttaaaataaaggatgtattaaatttatgggttgccctaggcaattg 90436  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 36159 - 36105
Alignment:
Q  212 aagtaataaaatttataag-ttcgtatctacagggactgtttcaatttctactcg 265  Q
    ||||||||||||||||||| || ||||| ||||||| |||||||| |||||||||    
T  36159 aagtaataaaatttataagatttgtatccacagggagtgtttcaacttctactcg 36105  T

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